{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":62,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":62,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"64403a4639f4","filters":{"venue":"International Journal for Parasitology Drugs and Drug Resistance"}},"results":[{"id":"W2015519080","doi":"10.1016/j.ijpddr.2012.04.001","title":"Moxidectin and the avermectins: Consanguinity but not identity","year":2012,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":433,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Institut National de la Recherche Agronomique; McGill University; Fonds Québécois de la Recherche sur la Nature et les Technologies; Agence Nationale de la Recherche; Natural Sciences and Engineering Research Council of Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Wellcome Trust","keywords":"Moxidectin; Medicine; Identity (music); Psychology; Ivermectin; Veterinary medicine","authors":[{"name":"Roger K. Prichard","is_ca":true},{"name":"Cécile Ménez","is_ca":false},{"name":"Anne Lespine","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06793445870920581,"gpt":0.4337960357938331,"spread":0.3658615770846273,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001750488,0.0003786804,0.001123925,0.0001971062,0.0005692109,0.0003254624,0.0004993495,0.0002502393,0.0001001479],"category_scores_gemma":[0.0005915041,0.0002522123,0.0005130791,0.00007503992,0.0004518751,0.0003271141,0.000135637,0.0008158364,0.00004648366],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001301013,"about_ca_system_score_gemma":0.0001413661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006818211,"about_ca_topic_score_gemma":0.00021689,"domain_scores_codex":[0.9974012,0.0006552241,0.0008775735,0.0003628242,0.0003409799,0.0003621666],"domain_scores_gemma":[0.9963672,0.002019311,0.0008916433,0.0002109142,0.0003308833,0.000180042],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.004554979,0.0001982601,0.0003505054,0.002682289,0.003324375,0.0003141987,0.001244421,2.240583e-7,0.000004933329,0.1101125,0.008938476,0.8682749],"study_design_scores_gemma":[0.001982087,0.0000236596,0.0001595226,0.0008680166,0.0006043356,0.004181667,0.0001263226,0.000007159058,0.0000014668,0.002898231,0.9888754,0.0002721584],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001708343,0.9877567,0.0006437792,0.001184089,0.005530107,0.000639006,0.0001658152,0.00003661416,0.002335488],"genre_scores_gemma":[0.02382073,0.969669,0.0001314063,0.0005493672,0.001529184,0.0001927611,0.00001604792,0.00003980053,0.004051685],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9799369,"threshold_uncertainty_score":0.999993,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2006693262","doi":"10.1016/j.ijpddr.2011.09.002","title":"Is anthelmintic resistance a concern for the control of human soil-transmitted helminths?","year":2011,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":277,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Vlaamse regering; Fonds Québécois de la Recherche sur la Nature et les Technologies; National Health and Medical Research Council; McGill University","keywords":"Necator americanus; Ancylostoma duodenale; Trichuris trichiura; Anthelmintic; Ascaris lumbricoides; Trichuriasis; Ancylostoma caninum; Biology; Helminths; Resistance (ecology); Mass drug administration; Environmental health; Drug resistance; Livestock; Veterinary medicine; Ascariasis; Biotechnology; Medicine; Ecology; Immunology","authors":[{"name":"Jozef Vercruysse","is_ca":false},{"name":"Marco Albonico","is_ca":false},{"name":"Jerzy M. Behnke","is_ca":false},{"name":"Andrew C. Kotze","is_ca":false},{"name":"Roger K. Prichard","is_ca":true},{"name":"James McCarthy","is_ca":false},{"name":"Antonio Montresor","is_ca":false},{"name":"Bruno Levecke","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07127059335018314,"gpt":0.4214043289582384,"spread":0.3501337356080552,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009967588,0.0005624756,0.00174264,0.0002898227,0.0005967154,0.0001313973,0.001083013,0.0003509415,0.0001739577],"category_scores_gemma":[0.0002401763,0.0003978371,0.001260553,0.0001160163,0.0005446094,0.0001487416,0.00004722081,0.0005928638,0.00001405337],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001290855,"about_ca_system_score_gemma":0.0002732043,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003056585,"about_ca_topic_score_gemma":0.0002152654,"domain_scores_codex":[0.9966366,0.000313972,0.001624991,0.0005775313,0.0003492615,0.0004976853],"domain_scores_gemma":[0.9943934,0.002400221,0.001735546,0.0004070664,0.0009079673,0.0001557754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.01366762,0.000839241,0.0003347693,0.01811764,0.01743691,0.0002991159,0.0057461,0.000001658177,0.0001225627,0.1115638,0.1147922,0.7170784],"study_design_scores_gemma":[0.002620928,0.0001544952,0.00003851452,0.003763345,0.001218264,0.0003400889,0.0001458174,0.00002959297,0.00001870265,0.003897352,0.9873719,0.0004009764],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002268506,0.9796645,0.01172858,0.001508057,0.002805537,0.001709086,0.0011269,0.0000366319,0.001193833],"genre_scores_gemma":[0.05012463,0.9362378,0.0002186138,0.0005765437,0.001101995,0.0008183548,0.00004140343,0.0001072374,0.01077342],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8725797,"threshold_uncertainty_score":0.9998474,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2003446114","doi":"10.1016/j.ijpddr.2014.07.007","title":"Recent advances in candidate-gene and whole-genome approaches to the discovery of anthelmintic resistance markers and the description of drug/receptor interactions","year":2014,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":214,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Biotechnology and Biological Sciences Research Council; Zoetis","keywords":"Anthelmintic; Drug resistance; Biology; Resistance (ecology); Computational biology; Drug discovery; Biotechnology; Bioinformatics; Genetics; Ecology","authors":[{"name":"Andrew C. Kotze","is_ca":false},{"name":"Peter Hunt","is_ca":false},{"name":"Philip Skuce","is_ca":false},{"name":"Georg von Samson‐Himmelstjerna","is_ca":false},{"name":"Richard J. Martin","is_ca":false},{"name":"Heinz Sager","is_ca":false},{"name":"Jürgen Krücken","is_ca":false},{"name":"Jane E. Hodgkinson","is_ca":false},{"name":"Anne Lespine","is_ca":false},{"name":"Aaron R. Jex","is_ca":false},{"name":"John S. Gilleard","is_ca":true},{"name":"Robin N. Beech","is_ca":true},{"name":"Adrian J. Wolstenholme","is_ca":false},{"name":"Janina Demeler","is_ca":false},{"name":"Alan P. Robertson","is_ca":false},{"name":"Claude Charvet","is_ca":false},{"name":"Cédric Neveu","is_ca":false},{"name":"Ronald Kaminsky","is_ca":false},{"name":"Lucien Rufener","is_ca":false},{"name":"Mélanie Alberich","is_ca":false},{"name":"Cécile Ménez","is_ca":false},{"name":"Roger K. Prichard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05256629548154994,"gpt":0.3547633936037349,"spread":0.3021970981221849,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001374784,0.0002994806,0.00104571,0.0002964221,0.0002090268,0.000130478,0.0003895951,0.00009094155,0.000009932735],"category_scores_gemma":[0.0003024638,0.0001816142,0.0002155798,0.0001544152,0.0004667665,0.0003052097,0.00009661823,0.0003981328,0.000001852158],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001190289,"about_ca_system_score_gemma":0.0001006768,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002660123,"about_ca_topic_score_gemma":0.001414336,"domain_scores_codex":[0.9974433,0.0006462852,0.001063186,0.000372156,0.0002457359,0.0002293801],"domain_scores_gemma":[0.9972489,0.001276949,0.0009927854,0.0002191912,0.0001846023,0.00007749896],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.021389,0.0003665988,0.001086442,0.007707686,0.002166609,0.00003652758,0.006754692,0.00004216497,0.0001625986,0.02026174,0.005376817,0.9346491],"study_design_scores_gemma":[0.001187004,0.00004383294,0.0002920802,0.002455182,0.0001973083,0.0001831952,0.0006428019,0.0000268067,0.000005622195,0.0007814667,0.9939965,0.0001881763],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.006911865,0.9839892,0.001204679,0.004697738,0.001413492,0.0009184272,0.0004255778,0.000006490036,0.000432511],"genre_scores_gemma":[0.06678326,0.9303839,0.0002229221,0.00009502881,0.0002314091,0.000223328,0.00004199509,0.00002505691,0.001993166],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9886197,"threshold_uncertainty_score":0.7406012,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1967285730","doi":"10.1016/j.ijpddr.2011.10.001","title":"P-glycoproteins and other multidrug resistance transporters in the pharmacology of anthelmintics: Prospects for reversing transport-dependent anthelmintic resistance","year":2011,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":199,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Institut National de la Recherche Agronomique; McGill University; Fonds Québécois de la Recherche sur la Nature et les Technologies; Agence Nationale de la Recherche; Natural Sciences and Engineering Research Council of Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Wellcome Trust","keywords":"Anthelmintic; Multiple drug resistance; Pharmacology; Drug resistance; P-glycoprotein; Efflux; Biology; Ivermectin; ATP-binding cassette transporter; Drug; Transporter; Microbiology; Gene; Biochemistry","authors":[{"name":"Anne Lespine","is_ca":false},{"name":"Cécile Menez","is_ca":false},{"name":"Catherine Bourguinat","is_ca":true},{"name":"Roger K. Prichard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05223742295876134,"gpt":0.3999071119036365,"spread":0.3476696889448752,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001495631,0.0005639101,0.00154001,0.0004439691,0.0003420476,0.00006496193,0.0007800597,0.0003288473,0.00004010665],"category_scores_gemma":[0.000101842,0.0004341542,0.0005518585,0.0001545669,0.0004698308,0.0001965334,0.00003028865,0.0006715805,0.000001944762],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001617834,"about_ca_system_score_gemma":0.0001908006,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003472694,"about_ca_topic_score_gemma":0.001465303,"domain_scores_codex":[0.9964172,0.0003987947,0.001584617,0.0007074717,0.0003488107,0.0005430633],"domain_scores_gemma":[0.9969079,0.001021003,0.001343081,0.0002870637,0.0003128521,0.0001280457],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.08506379,0.005309598,0.003373835,0.1112742,0.01396963,0.005465241,0.07600191,0.0000141846,0.001097263,0.1066994,0.03214741,0.5595835],"study_design_scores_gemma":[0.003317901,0.0001241617,0.00009866142,0.006081263,0.0007669996,0.0004508939,0.00072264,0.00001029451,0.00006375914,0.002039812,0.9858083,0.0005153143],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004738722,0.9829865,0.002165914,0.001235529,0.002707871,0.003628951,0.001077233,0.00003366709,0.001425686],"genre_scores_gemma":[0.1128391,0.8792149,0.001843516,0.000410939,0.0008036129,0.0009441765,0.00003904914,0.0001290382,0.003775659],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9536609,"threshold_uncertainty_score":0.9998111,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2949674663","doi":"10.1016/j.ijpddr.2019.06.002","title":"Perspectives on the utility of moxidectin for the control of parasitic nematodes in the face of developing anthelmintic resistance","year":2019,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":151,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Luonnontieteiden ja Tekniikan Tutkimuksen Toimikunta; Elanco Animal Health; National Center for Veterinary Parasitology; Zoetis; Canada Research Chairs; Bayer Animal Health; McGill University; Natural Sciences and Engineering Research Council of Canada; Bill and Melinda Gates Foundation","keywords":"Moxidectin; Ivermectin; Anthelmintic; Doramectin; Biology; Nematode; Levamisole; Helminths; Livestock; Veterinary medicine; Pharmacology; Medicine; Immunology; Zoology; Ecology","authors":[{"name":"Roger K. Prichard","is_ca":true},{"name":"Timothy G. Geary","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07546655204346464,"gpt":0.4281641976924238,"spread":0.3526976456489591,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002245146,0.0002938764,0.001186534,0.0001812956,0.0001929876,0.00004411836,0.0009396002,0.0001426259,0.00001851627],"category_scores_gemma":[0.001234006,0.0001491452,0.0006024371,0.0001518108,0.0004058168,0.00006816485,0.0000254714,0.0004426735,0.000001489668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007902406,"about_ca_system_score_gemma":0.0002805727,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001719719,"about_ca_topic_score_gemma":0.00010627,"domain_scores_codex":[0.9971249,0.0007209917,0.001224104,0.0003093947,0.0003739427,0.0002467283],"domain_scores_gemma":[0.9853985,0.01210077,0.001557689,0.0003554493,0.0005615497,0.00002599419],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.02480887,0.001677357,0.002440152,0.03323211,0.01106391,0.0001101003,0.03835161,0.00006698263,0.0001492435,0.6628153,0.0129321,0.2123523],"study_design_scores_gemma":[0.005925276,0.0005451689,0.004557027,0.02763439,0.001901531,0.0006947682,0.03057633,0.0007480325,0.0001528011,0.01519772,0.9111436,0.0009233336],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.00720319,0.9732149,0.01019289,0.004984167,0.000928952,0.002400691,0.0003742503,0.000007109865,0.0006938035],"genre_scores_gemma":[0.689073,0.3100823,0.0001017958,0.0001105803,0.0001041857,0.0002263524,0.000003427101,0.00001952619,0.0002788616],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.8982115,"threshold_uncertainty_score":0.6081963,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1969828710","doi":"10.1016/j.ijpddr.2014.09.005","title":"Drug resistance analysis by next generation sequencing in Leishmania","year":2014,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Biology; Drug resistance; Leishmania; Genetics; Computational biology; DNA sequencing; Gene; Identification (biology); Population; Single-nucleotide polymorphism; Genotype; Medicine","authors":[{"name":"Philippe Leprohon","is_ca":true},{"name":"Christopher Fernandez‐Prada","is_ca":true},{"name":"Élodie Gazanion","is_ca":true},{"name":"Rubens Lima do Monte‐Neto","is_ca":true},{"name":"Marc Ouellette","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06306305574010403,"gpt":0.4045048958390189,"spread":0.3414418400989149,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001802303,0.0006043682,0.002805118,0.001314388,0.0003655313,0.0003423747,0.0006486339,0.0002959766,0.00003599636],"category_scores_gemma":[0.0006946409,0.0005104923,0.0009025545,0.0006388282,0.0002649598,0.0003036499,0.0001186898,0.001081365,0.00001444201],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001559793,"about_ca_system_score_gemma":0.0006464929,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006411934,"about_ca_topic_score_gemma":0.003704605,"domain_scores_codex":[0.9952702,0.0005151285,0.001682342,0.0009196912,0.0009508711,0.0006617481],"domain_scores_gemma":[0.9963851,0.0009805171,0.001121741,0.0004026833,0.0008282817,0.0002816884],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001736251,0.0004316442,0.003961767,0.01443876,0.02066988,0.001471186,0.0024262,0.00004225519,0.000134131,0.005316922,0.671036,0.278335],"study_design_scores_gemma":[0.001187492,0.00002328349,0.00008179369,0.004055426,0.001722731,0.0001780033,0.0001595443,0.0001734889,0.00001393018,0.0003550911,0.991611,0.0004382034],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001954197,0.9903747,0.0009786426,0.003430817,0.0009921534,0.0008402253,0.0001204808,0.0000306631,0.001278082],"genre_scores_gemma":[0.00254275,0.9702972,0.001783069,0.0002701806,0.001051096,0.0002386213,0.0003834093,0.0000710657,0.02336265],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.320575,"threshold_uncertainty_score":0.9997346,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3107603614","doi":"10.1016/j.ijpddr.2020.11.005","title":"Challenges and opportunities for the adoption of molecular diagnostics for anthelmintic resistance","year":2020,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":97,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; University of Calgary","funders":"China Agricultural Research System","keywords":"Anthelmintic; Resistance (ecology); Biology; Drug resistance; Risk analysis (engineering); Biotechnology; Computational biology; Business; Ecology; Genetics","authors":[{"name":"Andrew C. Kotze","is_ca":false},{"name":"John S. Gilleard","is_ca":true},{"name":"Stephen R. Doyle","is_ca":false},{"name":"Roger K. Prichard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08753789623996394,"gpt":0.3647188155887414,"spread":0.2771809193487774,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000365898,0.0001288703,0.0002326782,0.00005427122,0.0001908047,0.00004885624,0.000188861,0.0000621026,0.000004253282],"category_scores_gemma":[0.000551375,0.0001022029,0.0001223555,0.00001766184,0.0001571676,0.0001016997,0.00002514076,0.00009848263,4.183529e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001870976,"about_ca_system_score_gemma":0.00004201488,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":9.949662e-7,"about_ca_topic_score_gemma":0.00003159802,"domain_scores_codex":[0.9990758,0.00005793172,0.0003602059,0.0001984415,0.0001438111,0.0001638003],"domain_scores_gemma":[0.9975063,0.001587791,0.0002779948,0.00008173446,0.0004593524,0.00008680562],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.02438692,0.0002673873,0.0007663651,0.00134766,0.001927313,0.0001752557,0.009091714,0.00005198583,0.005771547,0.743564,0.03816716,0.1744828],"study_design_scores_gemma":[0.006209679,0.000745657,0.004080413,0.0003807107,0.0003490784,0.0002539675,0.006443259,0.002308292,0.001796056,0.03992521,0.937037,0.0004707073],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.315536,0.1107913,0.259499,0.3052729,0.00338449,0.002361763,0.0007741743,0.00007380787,0.002306591],"genre_scores_gemma":[0.9841481,0.01231477,0.001412191,0.001139183,0.0003359663,0.0001774125,0.000009548572,0.00001818604,0.0004446479],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8988698,"threshold_uncertainty_score":0.4167715,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2079086346","doi":"10.1016/j.ijpddr.2014.05.002","title":"Quantitative proteomic analysis of amphotericin B resistance in Leishmania infantum","year":2014,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Ministère du Développement Économique, de l’Innovation et de l’Exportation","keywords":"Stable isotope labeling by amino acids in cell culture; Leishmania infantum; Proteome; Biology; Mutant; Proteomics; Quantitative proteomics; Leishmania; Biochemistry; Cell biology; Microbiology; Leishmaniasis; Gene; Genetics; Visceral leishmaniasis","authors":[{"name":"Marie‐Christine Brotherton","is_ca":true},{"name":"Sylvie Bourassa","is_ca":true},{"name":"Danielle Légaré","is_ca":true},{"name":"Guy G. Poirier","is_ca":true},{"name":"Arnaud Droit","is_ca":true},{"name":"Marc Ouellette","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01673406940489549,"gpt":0.3667464698279008,"spread":0.3500124004230053,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001042312,0.0001782504,0.0007537064,0.0009027375,0.0001162215,0.0000446033,0.0002729242,0.00007231651,0.00001704041],"category_scores_gemma":[0.0009333896,0.0001531233,0.0002139114,0.0004540794,0.0003020563,0.0001535756,0.00005624573,0.0002901595,0.000002039402],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001466672,"about_ca_system_score_gemma":0.00009960413,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005699441,"about_ca_topic_score_gemma":0.002275108,"domain_scores_codex":[0.9979765,0.0001709804,0.000708795,0.0003369483,0.0004939213,0.0003128253],"domain_scores_gemma":[0.9978385,0.0006684121,0.0004359678,0.0001828982,0.0007625669,0.0001116599],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02060315,0.0006148264,0.8569074,0.0004056646,0.007179305,0.0002327561,0.007232602,0.0001551904,0.0177309,0.07544002,0.01152374,0.001974465],"study_design_scores_gemma":[0.005188438,0.0002848211,0.9627561,0.0005759537,0.0005586421,0.00005221386,0.001054914,0.001757317,0.003470128,0.01114757,0.01282743,0.0003264575],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9862316,0.001336946,0.00232565,0.006867413,0.0003002704,0.0003567753,0.00003712329,0.00001122355,0.002533019],"genre_scores_gemma":[0.9887732,0.0006499941,0.008108763,0.0002054086,0.00009170081,0.00005409475,0.00001630182,0.0000158908,0.002084636],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1058487,"threshold_uncertainty_score":0.6244186,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2159114486","doi":"10.1016/j.ijpddr.2013.11.002","title":"Untargeted metabolomic analysis of miltefosine action in Leishmania infantum reveals changes to the internal lipid metabolism","year":2013,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; University of Glasgow; Ministerio de Economía y Competitividad; Scottish Universities Physics Alliance; Wellcome Trust","keywords":"Miltefosine; Mode of action; Metabolomics; Leishmania infantum; Leishmania; Biology; Metabolic pathway; Lipid metabolism; Biochemistry; Metabolite; Pharmacology; Chemistry; Visceral leishmaniasis; Metabolism; Leishmaniasis; Immunology; Bioinformatics","authors":[{"name":"Isabel M. Vincent","is_ca":true},{"name":"Stefan Weidt","is_ca":false},{"name":"Luís Rivas","is_ca":false},{"name":"Karl Burgess","is_ca":false},{"name":"Terry Smith","is_ca":false},{"name":"Marc Ouellette","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02003444048206141,"gpt":0.3592013479816029,"spread":0.3391669074995414,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008913721,0.0001951927,0.0007421413,0.001067335,0.000135569,0.00008012996,0.0003984793,0.0000705705,0.00009315654],"category_scores_gemma":[0.0005731644,0.0001325958,0.0002193563,0.0005557013,0.000154511,0.0001944187,0.0001071096,0.0003471442,0.000008051776],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001229639,"about_ca_system_score_gemma":0.0000598665,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004775932,"about_ca_topic_score_gemma":0.004519136,"domain_scores_codex":[0.9980009,0.0001787563,0.0006366913,0.0003082108,0.0005277936,0.0003476782],"domain_scores_gemma":[0.9978647,0.0004554483,0.000359834,0.0002060446,0.0009623513,0.0001515808],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01527493,0.001105129,0.5569344,0.0003256566,0.030748,0.0001801557,0.01542483,0.0005963058,0.0756491,0.009608707,0.2405061,0.05364675],"study_design_scores_gemma":[0.002031352,0.00007907193,0.9055167,0.0001609717,0.0007284163,0.00008833479,0.0014222,0.0006107322,0.004049778,0.0009337995,0.08419129,0.0001873543],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9298012,0.003708992,0.0004591924,0.06425589,0.0009011704,0.0005477198,0.0000488629,0.00001052478,0.0002664874],"genre_scores_gemma":[0.9919341,0.002588915,0.001106006,0.001146078,0.0004646364,0.0001484422,0.0000194468,0.00001676138,0.002575567],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3485823,"threshold_uncertainty_score":0.5407102,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3157260706","doi":"10.1016/j.ijpddr.2021.08.005","title":"Multiple drug resistance in hookworms infecting greyhound dogs in the USA","year":2021,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":76,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Bill and Melinda Gates Foundation","keywords":"Ancylostoma caninum; Feces; Veterinary medicine; Albendazole; Moxidectin; Eggs per gram; Drug resistance; Biology; Pyrantel; Anthelmintic; Medicine; Helminths; Microbiology; Immunology; Zoology","authors":[{"name":"Pablo D. Jimenez Castro","is_ca":false},{"name":"Abhinaya Venkatesan","is_ca":true},{"name":"Elizabeth Redman","is_ca":true},{"name":"Rebecca Chen","is_ca":true},{"name":"Abigail Malatesta","is_ca":false},{"name":"Hannah Huff","is_ca":false},{"name":"Daniel A. Zuluaga Salazar","is_ca":false},{"name":"Russell W. Avramenko","is_ca":true},{"name":"John S. Gilleard","is_ca":true},{"name":"Ray M. Kaplan","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02695743260341278,"gpt":0.3655597962835817,"spread":0.3386023636801689,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001189518,0.0002068577,0.0003161443,0.0002218542,0.0002825565,0.0002389214,0.0003812182,0.00009479229,0.0000693449],"category_scores_gemma":[0.0006901013,0.0001673774,0.0001464124,0.000221557,0.000106533,0.000311613,0.00005692523,0.0005946186,0.00001725765],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001735139,"about_ca_system_score_gemma":0.00012398,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001610425,"about_ca_topic_score_gemma":0.04521923,"domain_scores_codex":[0.9978401,0.0003805479,0.0006718111,0.0003724735,0.0003433081,0.0003917608],"domain_scores_gemma":[0.9978189,0.001330943,0.0002712264,0.0001943288,0.0003054324,0.00007913992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003430721,0.0004932567,0.9402034,0.00008547802,0.0002074301,0.003233571,0.009326046,0.00005436737,0.001336544,0.02599456,0.01103828,0.004596361],"study_design_scores_gemma":[0.008751584,0.00005679678,0.602695,0.00057405,0.00003581124,0.002059869,0.002875573,0.0003095809,0.000450598,0.02807488,0.3534649,0.0006513839],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9808844,0.001537556,0.0005587628,0.008964938,0.001693426,0.0002314931,0.00002033797,0.00001701409,0.006092086],"genre_scores_gemma":[0.9930062,0.0002741111,0.0004960927,0.001341192,0.0003588774,0.00008862164,0.00001023603,0.00001828463,0.004406374],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3424266,"threshold_uncertainty_score":0.972203,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2884048087","doi":"10.1016/j.ijpddr.2018.06.006","title":"Clinical validation of molecular markers of macrocyclic lactone resistance in Dirofilaria immitis","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Bayer Animal Health; Génome Québec; Zoetis; McGill University","keywords":"Dirofilaria immitis; Single-nucleotide polymorphism; SNP; Biology; Genotype; DNA extraction; Genetics; Polymerase chain reaction; Immunology; Gene; Helminths","authors":[{"name":"Cristina Ballesteros","is_ca":true},{"name":"Cassan Pulaski","is_ca":false},{"name":"Catherine Bourguinat","is_ca":true},{"name":"Kathy Keller","is_ca":true},{"name":"Roger K. Prichard","is_ca":true},{"name":"Timothy G. Geary","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01454682131794873,"gpt":0.4092858115657585,"spread":0.3947389902478098,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005349793,0.0001166909,0.0003903416,0.0002045275,0.00004643889,0.00001797321,0.0001642713,0.00007466275,0.00004140573],"category_scores_gemma":[0.0004491604,0.0001033815,0.0001674953,0.0001040595,0.000417816,0.0001028966,0.00002878712,0.0001507896,0.000002646351],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007534494,"about_ca_system_score_gemma":0.0001674058,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002143585,"about_ca_topic_score_gemma":0.0001164133,"domain_scores_codex":[0.9983369,0.0001378903,0.0006907784,0.0002291009,0.0003875988,0.000217739],"domain_scores_gemma":[0.9983907,0.0004007368,0.0003349442,0.0001468374,0.0005653845,0.0001614437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.04336637,0.001734212,0.9070018,0.0003173188,0.001993248,0.0009927972,0.0006784796,0.000004245567,0.01122742,0.01487761,0.007031879,0.01077461],"study_design_scores_gemma":[0.01480265,0.0007081577,0.8962877,0.001266031,0.0002656045,0.0001705465,0.0005211738,0.00006597051,0.05933611,0.01783179,0.008460534,0.0002837236],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911582,0.001943755,0.0007592692,0.002102562,0.0004149966,0.0002521255,0.00007401795,0.000004972286,0.003290111],"genre_scores_gemma":[0.9941347,0.0006472621,0.003892705,0.00009343214,0.0001257038,0.00001714112,0.00003060937,0.00001107777,0.001047351],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04810869,"threshold_uncertainty_score":0.4215774,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3087675278","doi":"10.1016/j.ijpddr.2020.09.003","title":"The use of ITS-2 rDNA nemabiome metabarcoding to enhance anthelmintic resistance diagnosis and surveillance of ovine gastrointestinal nematodes","year":2020,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":70,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Saskatchewan; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Alberta Agriculture and Forestry; University of Calgary","keywords":"Teladorsagia circumcincta; Haemonchus contortus; Biology; Ivermectin; Flock; Anthelmintic; Feces; Levamisole; Moxidectin; Veterinary medicine; Parasite hosting; Zoology; Helminths; Ecology; Medicine","authors":[{"name":"Camila Queiroz","is_ca":true},{"name":"Michel Lévy","is_ca":true},{"name":"Russell W. Avramenko","is_ca":true},{"name":"Elizabeth Redman","is_ca":true},{"name":"Kelsey Kearns","is_ca":true},{"name":"Lana Swain","is_ca":true},{"name":"Haley Silas","is_ca":true},{"name":"Fabienne D. Uehlinger","is_ca":true},{"name":"John S. Gilleard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05038557727279879,"gpt":0.3731737093076303,"spread":0.3227881320348315,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004988232,0.000190125,0.0004239931,0.0001027687,0.0002478823,0.0001098624,0.0003203709,0.00003810953,0.00002079378],"category_scores_gemma":[0.001769854,0.000149225,0.0001279505,0.0001409172,0.0002294959,0.0002192082,0.00008579947,0.0001837681,0.000002817262],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003031096,"about_ca_system_score_gemma":0.00005143422,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000122365,"about_ca_topic_score_gemma":0.000177764,"domain_scores_codex":[0.9982215,0.000176995,0.0007276486,0.000304809,0.0002989529,0.0002700668],"domain_scores_gemma":[0.9967161,0.001794689,0.0005309532,0.0001381105,0.0006377697,0.0001823402],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.06470601,0.0008914725,0.4729182,0.00235753,0.002804584,0.0009060312,0.009851338,0.0003909628,0.2363966,0.07920798,0.07598259,0.0535867],"study_design_scores_gemma":[0.007861047,0.002293536,0.1784343,0.003860205,0.0003117808,0.002860712,0.002877247,0.005131708,0.05463331,0.004679312,0.7351252,0.001931638],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9609995,0.003579692,0.009235444,0.02500502,0.0004813512,0.0003664865,0.0001589599,0.00002221172,0.0001513167],"genre_scores_gemma":[0.9944204,0.001000182,0.003335053,0.0004402015,0.0001658382,0.0000513091,0.000002392039,0.00001793838,0.000566662],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6591426,"threshold_uncertainty_score":0.608522,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2791799533","doi":"10.1016/j.ijpddr.2018.03.004","title":"High-throughput Cos-Seq screen with intracellular Leishmania infantum for the discovery of novel drug-resistance mechanisms","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Université Laval; Centre hospitalier de l'Université Laval; Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Miltefosine; Amastigote; Biology; Leishmania infantum; Drug resistance; Population; Cosmid; Gene; Leishmania; Leishmaniasis; Genetics; Visceral leishmaniasis; Medicine","authors":[{"name":"Christopher Fernandez‐Prada","is_ca":true},{"name":"Mansi Sharma","is_ca":true},{"name":"Marie Plourde","is_ca":true},{"name":"Eva Bresson","is_ca":true},{"name":"Gaétan Roy","is_ca":true},{"name":"Philippe Leprohon","is_ca":true},{"name":"Marc Ouellette","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01657867385436572,"gpt":0.3270441407471711,"spread":0.3104654668928054,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009512018,0.0002982041,0.0006164394,0.0001799916,0.0005817212,0.0001514728,0.0005801884,0.00008936428,0.00001441128],"category_scores_gemma":[0.0004023661,0.000192887,0.0001950259,0.0001518752,0.001011252,0.0003660634,0.0001166874,0.0003444881,0.00000231088],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001376877,"about_ca_system_score_gemma":0.0002477794,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007647039,"about_ca_topic_score_gemma":0.001689631,"domain_scores_codex":[0.9975071,0.00006158709,0.0006672063,0.0004677634,0.0007955745,0.0005007436],"domain_scores_gemma":[0.9960262,0.001160049,0.0005698549,0.0003376474,0.001773121,0.000133107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.06586548,0.001584965,0.0139596,0.0008062875,0.009018795,0.0002804806,0.005629042,0.00007305099,0.04019051,0.6558798,0.203001,0.003710958],"study_design_scores_gemma":[0.06937447,0.003014946,0.06909605,0.004929978,0.002327952,0.001892059,0.01064961,0.002408279,0.2113968,0.1346102,0.4877592,0.002540362],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5911089,0.005364696,0.3418111,0.05593473,0.002490339,0.001918979,0.0004252167,0.00004516746,0.0009009541],"genre_scores_gemma":[0.953065,0.0009028197,0.03109605,0.0005673441,0.001033565,0.0001467956,0.00003289392,0.00005222553,0.01310333],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5212696,"threshold_uncertainty_score":0.7865705,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2973119285","doi":"10.1016/j.ijpddr.2019.09.001","title":"Similarities and differences in the biotransformation and transcriptomic responses of Caenorhabditis elegans and Haemonchus contortus to five different benzimidazole drugs","year":2019,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; University of Calgary","funders":"Canadian Institutes of Health Research; University of Calgary","keywords":"Albendazole; Haemonchus contortus; Oxfendazole; Biology; Caenorhabditis elegans; Biotransformation; Anthelmintic; Fenbendazole; Benzimidazole; Metabolite; Pharmacology; Mebendazole; Biochemistry; Enzyme; Nematode; Chemistry; Gene","authors":[{"name":"Susan Stasiuk","is_ca":true},{"name":"Gillian MacNevin","is_ca":true},{"name":"Matthew L. Workentine","is_ca":true},{"name":"D. J. Gray","is_ca":true},{"name":"E. Redman","is_ca":true},{"name":"David J. Bartley","is_ca":false},{"name":"Alison Morrison","is_ca":false},{"name":"Navneet Sharma","is_ca":true},{"name":"Douglas D. Colwell","is_ca":true},{"name":"Dae-Kun Ro","is_ca":true},{"name":"John S. Gilleard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0175103023440865,"gpt":0.3214550601360698,"spread":0.3039447577919833,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003255747,0.0001482767,0.0002961967,0.0001848157,0.0001324475,0.0001125704,0.0001311157,0.000068468,0.0000119881],"category_scores_gemma":[0.00004689844,0.0001081009,0.00004537587,0.00003702736,0.0001477063,0.0002027296,0.00001675133,0.0001677738,4.978642e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002817956,"about_ca_system_score_gemma":0.00002418403,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001186469,"about_ca_topic_score_gemma":0.0007865163,"domain_scores_codex":[0.9989219,0.000156958,0.0003785999,0.0001899478,0.0001826615,0.0001699092],"domain_scores_gemma":[0.9989982,0.0006252388,0.0001273203,0.00006806353,0.0001076125,0.00007356511],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02551688,0.0003871643,0.7300329,0.0006858188,0.0007399839,0.0001395951,0.1469428,0.000008039661,0.01521989,0.03999425,0.002092662,0.03824],"study_design_scores_gemma":[0.004921638,0.0005535097,0.966866,0.0003494248,0.00006440913,0.0006169882,0.0143718,0.0005754738,0.0008059466,0.004142601,0.006411832,0.0003204329],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9902757,0.001499858,0.0002510532,0.006766071,0.0004050756,0.0003515907,0.0001452634,0.00000726388,0.0002980847],"genre_scores_gemma":[0.998174,0.0008707255,0.00005102727,0.0004684205,0.00005778794,0.00003356119,0.00000488252,0.000006928117,0.0003327142],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.236833,"threshold_uncertainty_score":0.4408227,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2052538874","doi":"10.1016/j.ijpddr.2014.06.002","title":"Resistance to the macrocyclic lactone moxidectin is mediated in part by membrane transporter P-glycoproteins: Implications for control of drug resistant parasitic nematodes","year":2014,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":48,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Brandon University","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Canada Foundation for Innovation; Ministère des relations internationales et de la Francophonie; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Moxidectin; Ivermectin; Biology; MOX fuel; Gene; Caenorhabditis elegans; Phenotype; Genetics; ATP-binding cassette transporter; Microbiology; Chemistry; Transporter","authors":[{"name":"Elizabeth E. Bygarski","is_ca":true},{"name":"Roger K. Prichard","is_ca":true},{"name":"Bernadette F. Ardelli","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007325569820567103,"gpt":0.3191819577224871,"spread":0.31185638790192,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008913688,0.0002228762,0.0003944413,0.0001051483,0.0003591217,0.00004590437,0.0005714563,0.0001027716,0.00008925226],"category_scores_gemma":[0.0002903074,0.0001753382,0.0001531193,0.0001571882,0.0002825797,0.0001834705,0.00002117611,0.0002373974,0.00001632862],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001207081,"about_ca_system_score_gemma":0.00002881282,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009323568,"about_ca_topic_score_gemma":0.005119641,"domain_scores_codex":[0.9980259,0.0001723712,0.0007611781,0.0004284241,0.0002244067,0.0003877513],"domain_scores_gemma":[0.9976358,0.001431888,0.0004188465,0.0002470854,0.0001216097,0.0001447012],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.02086379,0.001276118,0.4299904,0.0001878466,0.00101505,0.00002130239,0.008675829,0.000867162,0.2301064,0.01967553,0.2827537,0.004566835],"study_design_scores_gemma":[0.005122194,0.0001248644,0.2559158,0.0002939029,0.0001278787,0.00006397392,0.0004749542,0.0002713218,0.0184783,0.01297244,0.7055759,0.0005784737],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.911585,0.0008792418,0.01536975,0.068289,0.0006792048,0.001069278,0.00102368,0.00002258978,0.001082306],"genre_scores_gemma":[0.9925162,0.0001935601,0.0008976844,0.002048871,0.0001081625,0.0004012934,0.00004584244,0.00001961505,0.00376873],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4228222,"threshold_uncertainty_score":0.7150084,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3145878950","doi":"10.1016/j.ijpddr.2017.12.004","title":"The optimal timing of post-treatment sampling for the assessment of anthelminthic drug efficacy against Ascaris infections in humans","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; University of Calgary","funders":"Imperial College London; Vlaamse regering; World Health Organization; Bill and Melinda Gates Foundation","keywords":"Albendazole; Ascaris lumbricoides; Trichuris trichiura; Ascaris; Ascariasis; Helminths; Medicine; Anthelmintic; Helminthiasis; Trichuriasis; Ancylostoma duodenale; Sampling (signal processing); Veterinary medicine; Biology; Internal medicine; Necator americanus; Immunology; Surgery","authors":[{"name":"Bruno Levecke","is_ca":false},{"name":"Alice V. Easton","is_ca":false},{"name":"Piet Cools","is_ca":false},{"name":"Marco Albonico","is_ca":false},{"name":"Shaali Ame","is_ca":false},{"name":"John S. Gilleard","is_ca":true},{"name":"Jennifer Keiser","is_ca":false},{"name":"Antonio Montresor","is_ca":false},{"name":"Roger K. Prichard","is_ca":true},{"name":"Johnny Vlaminck","is_ca":false},{"name":"Jozef Vercruysse","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02268415496093773,"gpt":0.3986792689263089,"spread":0.3759951139653712,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005185611,0.000136308,0.0002484102,0.0001358066,0.0007654426,0.000039783,0.0003046586,0.00007328224,0.00002057825],"category_scores_gemma":[0.0001892132,0.00008504789,0.0001893483,0.00006080596,0.0004828463,0.00008246855,0.00003894472,0.0002137186,0.000001679167],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009475352,"about_ca_system_score_gemma":0.0001207498,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001044844,"about_ca_topic_score_gemma":0.001790125,"domain_scores_codex":[0.9989028,0.0001025648,0.0005261879,0.0001767285,0.00006022175,0.0002315153],"domain_scores_gemma":[0.9957414,0.003086278,0.0004278843,0.0001478202,0.000578189,0.00001840617],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.01469866,0.005925864,0.3513746,0.0001741252,0.01607461,0.000022965,0.04569733,0.005745269,0.2555359,0.1506704,0.02322997,0.1308503],"study_design_scores_gemma":[0.01216672,0.001361275,0.2956333,0.0007047511,0.0005734697,0.0003405545,0.01234251,0.001653794,0.03616247,0.00293025,0.635475,0.0006558355],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9830815,0.002425297,0.006050979,0.004775955,0.002520021,0.0004149916,0.0001939422,0.000007853356,0.00052946],"genre_scores_gemma":[0.9965081,0.0009194264,0.0008881236,0.00006388362,0.0001439566,0.00006929367,0.00002709393,0.00001034216,0.001369806],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.612245,"threshold_uncertainty_score":0.5887243,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3009070658","doi":"10.1016/j.ijpddr.2020.03.001","title":"Large scale screening for benzimidazole resistance mutations in Nematodirus battus, using both pyrosequence genotyping and deep amplicon sequencing, indicates the early emergence of resistance on UK sheep farms","year":2020,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":40,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Moredun Research Institute; Scottish Government; Rural and Environment Science and Analytical Services Division; Agriculture and Horticulture Development Board; University of Calgary; Moredun Foundation","keywords":"Pyrosequencing; Biology; Single-nucleotide polymorphism; Genetics; Amplicon; Genotyping; Locus (genetics); SNP genotyping; SNP; Veterinary medicine; Gene; Genotype; Polymerase chain reaction","authors":[{"name":"Lynsey Melville","is_ca":false},{"name":"Elizabeth Redman","is_ca":true},{"name":"Alison Morrison","is_ca":false},{"name":"Pai Chia Rebecca Chen","is_ca":true},{"name":"Russell W. Avramenko","is_ca":true},{"name":"Siân Mitchell","is_ca":false},{"name":"Jan van Dijk","is_ca":false},{"name":"Giles Innocent","is_ca":false},{"name":"Fiona Sargison","is_ca":false},{"name":"Catriona Aitken","is_ca":false},{"name":"John S. Gilleard","is_ca":true},{"name":"David J. Bartley","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04658125510480033,"gpt":0.3620768856322955,"spread":0.3154956305274952,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006532289,0.0002256215,0.0003835832,0.000168838,0.0005554904,0.0001231963,0.0003853839,0.0001022852,0.00002339371],"category_scores_gemma":[0.0003521017,0.0002059477,0.0001254672,0.0001819549,0.0002358571,0.0002460231,0.00005531026,0.0003339117,0.000001425858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008661987,"about_ca_system_score_gemma":0.00008799354,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004596456,"about_ca_topic_score_gemma":0.001320434,"domain_scores_codex":[0.997956,0.0001341942,0.000781808,0.0004520399,0.0002806213,0.0003953271],"domain_scores_gemma":[0.9982133,0.0005789184,0.0006243477,0.0001503878,0.0002891781,0.0001438989],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.05268298,0.0007860771,0.3775005,0.002111576,0.002422117,0.0007571561,0.1536301,0.007203546,0.1792914,0.2079985,0.006124213,0.009491788],"study_design_scores_gemma":[0.04700961,0.002059263,0.4653502,0.009315684,0.001007996,0.001364642,0.08085905,0.1176417,0.03680225,0.1461726,0.08596375,0.006453332],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9240943,0.003286666,0.06629256,0.004846736,0.0003807291,0.0005420583,0.0002010476,0.00002524386,0.0003306908],"genre_scores_gemma":[0.9940425,0.0002020219,0.004497965,0.0008023382,0.0001772786,0.00008698452,0.00001156659,0.00002758585,0.000151774],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1424892,"threshold_uncertainty_score":0.8398305,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4324144292","doi":"10.1016/j.ijpddr.2023.01.001","title":"Emergence of Ancylostoma caninum parasites with the benzimidazole resistance F167Y polymorphism in the US dog population","year":2023,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Cegep de Saint Hyacinthe","funders":"","keywords":"Ancylostoma caninum; Biology; Genotype; Genotyping; Isotype; DNA extraction; Nested polymerase chain reaction; Molecular biology; Genetics; Virology; Polymerase chain reaction; Gene; Helminths; Immunology; Antibody","authors":[{"name":"Christian M. Leutenegger","is_ca":false},{"name":"Cecilia E. Lozoya","is_ca":false},{"name":"Jeffrey Tereski","is_ca":false},{"name":"Christian Savard","is_ca":true},{"name":"Jennifer Ogeer","is_ca":false},{"name":"Rene Lallier","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009195682749478296,"gpt":0.3181758103535766,"spread":0.3089801276040983,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000529836,0.0001731945,0.0002501282,0.0002052949,0.0004573734,0.00004811666,0.0005505534,0.00009375365,0.00005893013],"category_scores_gemma":[0.00006966223,0.000105103,0.00009948345,0.0002774325,0.0002524091,0.0001708565,0.00003584856,0.0003531726,0.00002079477],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002846863,"about_ca_system_score_gemma":0.00005232696,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002237167,"about_ca_topic_score_gemma":0.005938131,"domain_scores_codex":[0.9986562,0.0001987241,0.0004369945,0.0002454479,0.0001404779,0.0003222009],"domain_scores_gemma":[0.9984581,0.0007098236,0.0003874797,0.0001953889,0.0002263655,0.00002278895],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003464963,0.0003062658,0.6615608,0.00006562448,0.0009363181,0.0001531987,0.009953137,0.000470932,0.01637136,0.04273586,0.2622004,0.001781074],"study_design_scores_gemma":[0.00189719,0.00008132779,0.9222358,0.000211329,0.00008397474,0.0003664556,0.003849868,0.00004820263,0.002407584,0.004078961,0.06445424,0.0002850574],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9793167,0.003302978,0.0001314165,0.01477715,0.001141282,0.0002495312,0.0001185899,0.00002491846,0.0009375014],"genre_scores_gemma":[0.9950035,0.0003830368,0.00008836149,0.0003270648,0.00008805217,0.00006449842,0.00008333875,0.00001298555,0.003949203],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.260675,"threshold_uncertainty_score":0.4285977,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977458740","doi":"10.1016/j.ijpddr.2013.08.001","title":"Molecular characterization of the MRPA transporter and antimony uptake in four New World Leishmania spp. susceptible and resistant to antimony","year":2013,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação Oswaldo Cruz; TDR; UNICEF","keywords":"Leishmania braziliensis; Biology; Leishmania; Efflux; Kinetoplastida; Intracellular; Molecular biology; Biochemistry; ATP-binding cassette transporter; Microbiology; Gene; Transporter; Cutaneous leishmaniasis; Parasite hosting; Leishmaniasis; Genetics; Immunology","authors":[{"name":"Douglas S. Moreira","is_ca":false},{"name":"Rubens Lima do Monte‐Neto","is_ca":true},{"name":"Juvana Moreira Andrade","is_ca":false},{"name":"Ana Maria Murta Santi","is_ca":false},{"name":"Priscila G. Reis","is_ca":false},{"name":"Fréderic Frézard","is_ca":false},{"name":"Silvane Maria Fonseca Murta","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01328981940571645,"gpt":0.304656141456295,"spread":0.2913663220505786,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003115227,0.0001667197,0.0003743512,0.0002932387,0.0001185169,0.00008442502,0.0001823075,0.00005436597,0.00002672565],"category_scores_gemma":[0.0001135476,0.0001235518,0.00007386931,0.0001811084,0.0001703187,0.0002009992,0.00006039087,0.0002244489,0.000001672914],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005008232,"about_ca_system_score_gemma":0.00008528311,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001171687,"about_ca_topic_score_gemma":0.001036092,"domain_scores_codex":[0.9985179,0.00006034857,0.0004960435,0.0002878429,0.0003669121,0.0002709406],"domain_scores_gemma":[0.9990296,0.0001068116,0.0001957797,0.0001396977,0.0003515587,0.0001765665],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002392691,0.00013228,0.6475216,0.0001883232,0.0003731103,0.0001915912,0.001616822,0.000005531352,0.3297506,0.002742053,0.007782748,0.00730276],"study_design_scores_gemma":[0.001901034,0.00009087574,0.9802697,0.0004041942,0.00003848137,0.00009574333,0.0001905368,0.00005362913,0.006327226,0.001342767,0.009157429,0.0001284213],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9620845,0.0008229209,0.0003320031,0.03547448,0.0002411563,0.0005852432,0.00002121789,0.000006888285,0.0004315897],"genre_scores_gemma":[0.9933153,0.0008300523,0.001114766,0.0006220076,0.0001111928,0.00002619818,0.000005454474,0.00001865255,0.003956363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3327481,"threshold_uncertainty_score":0.5038297,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1966705475","doi":"10.1016/j.ijpddr.2012.01.005","title":"Genotypic analysis of β-tubulin in Onchocerca volvulus from communities and individuals showing poor parasitological response to ivermectin treatment","year":2012,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Onchocerca volvulus; Onchocerciasis; Ivermectin; Genotype; Biology; Single-nucleotide polymorphism; Immunology; Microfilaria; Genetics; Gene; Helminths; Zoology; Filariasis","authors":[{"name":"Mike Y. Osei‐Atweneboana","is_ca":true},{"name":"Daniel A. Boakye","is_ca":false},{"name":"Kwablah Awadzi","is_ca":false},{"name":"John O. Gyapong","is_ca":false},{"name":"Roger K. Prichard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03034536495916321,"gpt":0.3911213130051679,"spread":0.3607759480460047,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005263085,0.0001827319,0.0005848685,0.0006326921,0.0001294213,0.00004304376,0.0001446022,0.00007797943,0.00006235152],"category_scores_gemma":[0.0002544288,0.0001437444,0.0001660916,0.0002024895,0.0001527445,0.000116532,0.00005257482,0.0001515686,0.000003100293],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002659613,"about_ca_system_score_gemma":0.0001109111,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004008292,"about_ca_topic_score_gemma":0.0007168867,"domain_scores_codex":[0.9983879,0.0002984599,0.0004317568,0.0001951193,0.0003270036,0.0003597871],"domain_scores_gemma":[0.9976856,0.001478253,0.000140062,0.0001421739,0.0001729591,0.0003809832],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01100557,0.0006287243,0.9760909,0.000008639689,0.002918653,0.00009493424,0.004275519,0.00002610422,0.0004959583,0.0002926808,0.0001969892,0.003965351],"study_design_scores_gemma":[0.003337591,0.0002781233,0.9894061,0.0000914553,0.0007800187,0.00005536354,0.002153404,0.0001118544,0.0007464072,0.0004106796,0.002503711,0.0001252886],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908384,0.004892997,0.000211143,0.003092262,0.0001830399,0.0003077537,0.000294957,0.000008636537,0.000170789],"genre_scores_gemma":[0.9969309,0.0005786075,0.001624662,0.0002451484,0.0001009501,0.00006167795,0.00008390069,0.000009699263,0.0003644646],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01331522,"threshold_uncertainty_score":0.5861726,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3014716530","doi":"10.1016/j.ijpddr.2020.03.003","title":"MRPA-independent mechanisms of antimony resistance in Leishmania infantum","year":2020,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Centre hospitalier de l'Université Laval; Université de Montréal","funders":"Fonds de recherche du Québec – Nature et technologies; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Canada Foundation for Innovation","keywords":"Biology; ABCC1; Mutant; Gene; Leishmania; Drug resistance; ATP-binding cassette transporter; Genetics; Microbiology; Transporter","authors":[{"name":"Noélie Douanne","is_ca":true},{"name":"Victoria Wagner","is_ca":true},{"name":"Gaétan Roy","is_ca":true},{"name":"Philippe Leprohon","is_ca":true},{"name":"Marc Ouellette","is_ca":true},{"name":"Christopher Fernandez‐Prada","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01899539065573842,"gpt":0.3399264094455591,"spread":0.3209310187898207,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005264052,0.0001911626,0.0005597876,0.0002332502,0.0001262171,0.00004725979,0.0003481277,0.00008990066,0.00003070925],"category_scores_gemma":[0.0004639112,0.0001708679,0.000150899,0.0001657774,0.0001860015,0.0001804635,0.00008012536,0.0004169139,0.000004817832],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001091168,"about_ca_system_score_gemma":0.00019115,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002017246,"about_ca_topic_score_gemma":0.0006532292,"domain_scores_codex":[0.9978507,0.0000865837,0.000679151,0.0003637808,0.0006750546,0.0003446887],"domain_scores_gemma":[0.998417,0.0002879921,0.0003344916,0.0001360497,0.0006125965,0.0002119081],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.04673145,0.001432157,0.3889152,0.001885922,0.003356159,0.005111832,0.01974415,0.00007293732,0.04432741,0.3630804,0.1205016,0.004840835],"study_design_scores_gemma":[0.03359251,0.001137803,0.5357035,0.002956561,0.0003498565,0.0008973509,0.007998125,0.0009319605,0.05022933,0.1413911,0.2233044,0.001507605],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9119021,0.004740097,0.005185283,0.0691357,0.0008642537,0.0006706512,0.00007403715,0.00003282443,0.007395067],"genre_scores_gemma":[0.9905959,0.001454075,0.005089329,0.000752689,0.0002244916,0.00002312654,0.000008392787,0.0000228847,0.001829128],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2216893,"threshold_uncertainty_score":0.6967791,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2791162845","doi":"10.1016/j.ijpddr.2018.02.001","title":"Structural model, functional modulation by ivermectin and tissue localization of Haemonchus contortus P-glycoprotein-13","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Haemonchus contortus; Ivermectin; Anthelmintic; P-glycoprotein; Biology; Caenorhabditis elegans; Nematode; In silico; ATP-binding cassette transporter; Transporter; In vivo; Glycoprotein; In vitro; Cell biology; Pharmacology; Drug resistance; Gene; Biochemistry; Multiple drug resistance; Microbiology; Genetics","authors":[{"name":"Marion A. David","is_ca":false},{"name":"Chantal Lebrun","is_ca":false},{"name":"Thomas Duguet","is_ca":true},{"name":"Franck Talmont","is_ca":false},{"name":"Robin N. Beech","is_ca":true},{"name":"Stéphane Orlowski","is_ca":false},{"name":"François André","is_ca":false},{"name":"Roger K. Prichard","is_ca":true},{"name":"Anne Lespine","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02131515108195162,"gpt":0.3428961350551051,"spread":0.3215809839731535,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002165727,0.0001459467,0.0002163591,0.0001148902,0.0002865832,0.00006304851,0.000104789,0.00009964358,0.00008882816],"category_scores_gemma":[0.00009820985,0.0001369357,0.00005173296,0.00004778713,0.0002259003,0.0002585017,0.00002661911,0.0001230721,0.000003073392],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006541857,"about_ca_system_score_gemma":0.00004781725,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005466288,"about_ca_topic_score_gemma":0.0001300467,"domain_scores_codex":[0.9988549,0.00006823559,0.0004159242,0.0002431347,0.0002480246,0.0001698026],"domain_scores_gemma":[0.9987411,0.0001094405,0.0003264633,0.00008000779,0.0006502847,0.00009270088],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0624808,0.0007207629,0.1474301,0.0004337292,0.003195505,0.0002183203,0.01385249,0.008171544,0.1848797,0.1066808,0.1843449,0.2875914],"study_design_scores_gemma":[0.01631112,0.001510606,0.06389961,0.000335865,0.0002227115,0.002675307,0.0009279242,0.7229128,0.01811152,0.07064638,0.1011202,0.001325919],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8638801,0.0004899467,0.1321776,0.0009998386,0.001299877,0.0002334395,0.00008861728,0.00002349171,0.0008070743],"genre_scores_gemma":[0.9969996,0.00005224523,0.000541717,0.0002246478,0.0004258768,0.0000209322,0.00003284526,0.00001376382,0.001688398],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7147413,"threshold_uncertainty_score":0.5584075,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2793565528","doi":"10.1016/j.ijpddr.2018.02.007","title":"High level efficacy of lufenuron against sea lice (Lepeophtheirus salmonis) linked to rapid impact on moulting processes","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria; University of Prince Edward Island","funders":"Natural Sciences and Engineering Research Council of Canada; Atlantic Veterinary College; Elanco Animal Health; University of Prince Edward Island; Health Canada; Canada Research Chairs; Canada Excellence Research Chairs, Government of Canada; Innovation PEI","keywords":"Lepeophtheirus; Lufenuron; Biology; Moulting; Zoology; Arthropod; Crustacean; Aquaculture; Toxicology; Ecology; Fishery; Pesticide; Fish <Actinopterygii>; Larva","authors":[{"name":"Jordan Poley","is_ca":true},{"name":"Laura M. Braden","is_ca":true},{"name":"Amber Messmer","is_ca":true},{"name":"Okechukwu O. Igboeli","is_ca":true},{"name":"Shona K. Whyte","is_ca":true},{"name":"Alicia Macdonald","is_ca":false},{"name":"José W. Rodríguez","is_ca":false},{"name":"Marta Gameiro","is_ca":false},{"name":"Lucien Rufener","is_ca":false},{"name":"Jacques Bouvier","is_ca":false},{"name":"Dorota Wadowska","is_ca":true},{"name":"Ben F. Koop","is_ca":true},{"name":"B.C. Hosking","is_ca":false},{"name":"Mark D. Fast","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02019941644413882,"gpt":0.3786106427524829,"spread":0.358411226308344,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000314652,0.0001943111,0.0002524936,0.0001184881,0.0003481183,0.00004726692,0.000422926,0.00009658884,0.0001890181],"category_scores_gemma":[0.0004238424,0.0001535954,0.0001082794,0.0001346428,0.0002790381,0.0001840674,0.00006968505,0.0002113987,0.0000999983],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001539181,"about_ca_system_score_gemma":0.00005269909,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009499596,"about_ca_topic_score_gemma":0.0002637858,"domain_scores_codex":[0.9986757,0.00007649951,0.0003940501,0.0003221131,0.0002420998,0.0002895464],"domain_scores_gemma":[0.9984895,0.0006968948,0.0003280991,0.000135277,0.0001966172,0.0001536195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02964781,0.002154095,0.6672025,0.00008834147,0.001636466,0.0001342718,0.01186602,0.004363779,0.09855283,0.002065736,0.06261378,0.1196744],"study_design_scores_gemma":[0.002054667,0.0005674682,0.9397959,0.0002529107,0.00004549302,0.0001472935,0.0002452571,0.0001314444,0.01826073,0.00103729,0.03705528,0.0004062381],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926781,0.000113754,0.0006016568,0.001952207,0.001230858,0.0001969305,0.0001379692,0.00001549318,0.003073009],"genre_scores_gemma":[0.9949651,0.0001033336,0.001833867,0.0005527425,0.0004285405,0.00001779049,0.00001743683,0.00001409089,0.002067129],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2725935,"threshold_uncertainty_score":0.6263438,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4390959427","doi":"10.1016/j.ijpddr.2024.100520","title":"Benzimidazole F167Y polymorphism in the canine hookworm, Ancylostoma caninum: Widespread geographic, seasonal, age, and breed distribution in United States and Canada dogs","year":2024,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Optech (Canada)","funders":"","keywords":"Ancylostoma caninum; Veterinary medicine; Ancylostoma; Biology; Breed; Population; Medicine; Helminths; Animal science; Zoology","authors":[{"name":"Christian M. Leutenegger","is_ca":true},{"name":"Michelle Evason","is_ca":false},{"name":"Jennifer L. Willcox","is_ca":false},{"name":"Haresh Rochani","is_ca":false},{"name":"Holly L. Richmond","is_ca":false},{"name":"Cathy Meeks","is_ca":false},{"name":"Cecilia E. Lozoya","is_ca":false},{"name":"Jeffrey Tereski","is_ca":false},{"name":"Samantha Loo","is_ca":false},{"name":"Kelly Mitchell","is_ca":false},{"name":"Jan Andrews","is_ca":false},{"name":"Christian Savard","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006226541135455577,"gpt":0.2838434730939604,"spread":0.2776169319585048,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003205149,0.0001837587,0.0002295418,0.0002538228,0.0002477817,0.000143082,0.0001975231,0.0001015741,0.00001989609],"category_scores_gemma":[0.00006365168,0.0001441257,0.00004349526,0.0001603015,0.0002285222,0.0001651539,0.000040794,0.0004890073,0.000001215759],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001298925,"about_ca_system_score_gemma":0.0001567411,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1823764,"about_ca_topic_score_gemma":0.7589177,"domain_scores_codex":[0.9988276,0.0001420307,0.0003554118,0.0002773266,0.0000867246,0.000310928],"domain_scores_gemma":[0.9988782,0.000775755,0.0001077537,0.0000813638,0.0001105881,0.00004638817],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003104021,0.000316487,0.7992727,0.000169815,0.001265824,0.002767523,0.006710429,0.0001546763,0.005441546,0.04622525,0.1282311,0.006340642],"study_design_scores_gemma":[0.002622192,0.000084586,0.7197,0.0006440103,0.00008844558,0.002856557,0.002251555,0.0004001421,0.0003674916,0.004774804,0.2658084,0.0004018426],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9674589,0.01679301,0.00005554809,0.01363134,0.001117628,0.0001663966,0.0006645344,0.00001227089,0.0001003916],"genre_scores_gemma":[0.9948187,0.003038072,0.00002193744,0.00058422,0.00006313059,0.00003391851,0.0005540206,0.0000105469,0.0008754446],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5765414,"threshold_uncertainty_score":0.8230683,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2519898417","doi":"10.1016/j.ijpddr.2016.09.001","title":"In silico analysis of the binding of anthelmintics to Caenorhabditis elegans P-glycoprotein 1","year":2016,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"P-glycoprotein; Anthelmintic; ATP-binding cassette transporter; Transporter; In silico; Caenorhabditis elegans; Chemistry; Docking (animal); Efflux; Binding site; Biochemistry; Multiple drug resistance; Moxidectin; Pharmacology; Biology; Gene; Antibiotics","authors":[{"name":"Marion A. David","is_ca":false},{"name":"Stéphane Orlowski","is_ca":false},{"name":"Roger K. Prichard","is_ca":true},{"name":"Shaima Hashem","is_ca":false},{"name":"François André","is_ca":false},{"name":"Anne Lespine","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007343551617097063,"gpt":0.3145621210347095,"spread":0.3072185694176125,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003559701,0.0001153141,0.0004414225,0.0004835649,0.00005859608,0.000008679381,0.0002577277,0.00006529601,0.00003538208],"category_scores_gemma":[0.0001233182,0.00006675735,0.0002414138,0.0003815937,0.000147153,0.00007280105,0.00002325375,0.0001056886,7.548882e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007210863,"about_ca_system_score_gemma":0.00008726947,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002530786,"about_ca_topic_score_gemma":0.0008881996,"domain_scores_codex":[0.9987018,0.00003658447,0.0005448969,0.0001874172,0.000337767,0.00019154],"domain_scores_gemma":[0.9989438,0.0001931403,0.0003003781,0.0001594197,0.0003210756,0.00008217455],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.006006836,0.0005754562,0.5872706,0.0002157302,0.003738379,0.0002224168,0.004142848,0.000093595,0.3546146,0.03307083,0.0029253,0.007123409],"study_design_scores_gemma":[0.008243118,0.0002552501,0.5029065,0.002737692,0.001808944,0.000190507,0.00162405,0.0001015564,0.4382592,0.008427988,0.03492008,0.0005250578],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.983076,0.0002475218,0.002833887,0.01252643,0.0006966385,0.0002368822,0.0001370614,0.00000382284,0.0002418075],"genre_scores_gemma":[0.9939921,0.0001762728,0.001203456,0.0001572562,0.00007744585,0.00001345998,0.000003092542,0.00001044104,0.004366406],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0843641,"threshold_uncertainty_score":0.2722286,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1984716936","doi":"10.1016/j.ijpddr.2014.07.004","title":"Comparative pharmacology of flatworm and roundworm glutamate-gated chloride channels: Implications for potential anthelmintics","year":2014,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasite Biology and Host Interactions","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"McGill University","keywords":"Flatworm; Pharmacology; Glutamate receptor; Chloride channel; Anthelmintic; Chemistry; Biology; Neurotoxin; Biochemistry; Receptor","authors":[{"name":"Timothy Lynagh","is_ca":false},{"name":"Brett A. Cromer","is_ca":false},{"name":"Vanessa Dufour","is_ca":true},{"name":"Bodo Laube","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01495069503420715,"gpt":0.3744103977791471,"spread":0.35945970274494,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000301939,0.0001352455,0.0002633083,0.00007389449,0.0003524043,0.00003666208,0.0002274088,0.00008283745,0.00005129422],"category_scores_gemma":[0.00004567616,0.0001218053,0.00007925981,0.00004923376,0.0004106852,0.000181575,0.0000582047,0.0001385512,0.00000529032],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005899509,"about_ca_system_score_gemma":0.00001573627,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001740367,"about_ca_topic_score_gemma":0.00008980653,"domain_scores_codex":[0.9990531,0.000058176,0.0003484042,0.0002398701,0.00008367674,0.0002168185],"domain_scores_gemma":[0.9988595,0.0005281615,0.000316699,0.00007233775,0.0001302897,0.00009298453],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.02304228,0.001984668,0.3922681,0.0001939615,0.004177379,0.00002510272,0.01230677,0.00757908,0.2642293,0.1135147,0.1489434,0.03173534],"study_design_scores_gemma":[0.007922367,0.0005516693,0.2857507,0.0001337551,0.0004857533,0.001020647,0.0009905911,0.01502053,0.05125078,0.06668226,0.5692194,0.000971463],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9718744,0.0002275654,0.01782681,0.006211641,0.002422067,0.0002803908,0.0001109315,0.00001354814,0.001032611],"genre_scores_gemma":[0.995776,0.0002430616,0.001882493,0.0002530743,0.0003052398,0.00004300709,0.00002812927,0.000007989083,0.001461005],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.420276,"threshold_uncertainty_score":0.4967076,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2587191457","doi":"10.1016/j.ijpddr.2017.02.001","title":"Quantitative characterization of hemozoin in Plasmodium berghei and vivax","year":2017,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Malaria Research and Control","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Johns Hopkins University; National Institute of Allergy and Infectious Diseases; Centers for Disease Control and Prevention; National Institutes of Health; National Center for Research Resources; Royal Bank of Canada","keywords":"Hemozoin; Plasmodium berghei; Chemistry; Plasmodium vivax; Chloroquine; Biochemistry; Biology; Heme; Immunology; Malaria; Plasmodium falciparum; Enzyme","authors":[{"name":"John M. Pisciotta","is_ca":false},{"name":"Peter F. Scholl","is_ca":false},{"name":"Joel L. Shuman","is_ca":false},{"name":"Vladimir Shualev","is_ca":false},{"name":"David Sullivan","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01606490085126817,"gpt":0.3668197582142473,"spread":0.3507548573629792,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003211481,0.00007995363,0.0002387103,0.0001354079,0.0001418934,0.00006691727,0.0001474054,0.00004925414,0.00001156398],"category_scores_gemma":[0.0002949566,0.00006837934,0.00004350485,0.00001738878,0.0001722091,0.0001790274,0.00003411306,0.0001530692,7.00187e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002821769,"about_ca_system_score_gemma":0.00006372709,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002591012,"about_ca_topic_score_gemma":0.0001717265,"domain_scores_codex":[0.9992187,0.0000367622,0.0002628728,0.0001455252,0.0001910991,0.0001450502],"domain_scores_gemma":[0.9991116,0.000147255,0.0002688812,0.00009802669,0.0002873013,0.00008693853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.06545753,0.0007172151,0.450098,0.0004622181,0.001193297,0.0007329441,0.004056741,0.000005586235,0.1872609,0.2594813,0.002019726,0.02851454],"study_design_scores_gemma":[0.006357597,0.0001683736,0.9770265,0.0002974929,0.00003103021,0.0001741913,0.0002316956,0.0007579358,0.004367317,0.006949525,0.003524865,0.0001134312],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9756905,0.0002930055,0.0009404587,0.02168814,0.0003253005,0.0001901401,0.00003685533,0.00000293018,0.0008326368],"genre_scores_gemma":[0.9967188,0.0005236319,0.00084571,0.0001067891,0.00009698964,0.00001521292,0.00001213579,0.000006490351,0.001674198],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5269285,"threshold_uncertainty_score":0.2788429,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2762417051","doi":"10.1016/j.ijpddr.2017.10.004","title":"Transcriptome profiling identifies genes/pathways associated with experimental resistance to paromomycin in Leishmania donovani","year":2017,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Indian Council of Medical Research; Faculté de Médecine, Université Laval; Université Laval","keywords":"Paromomycin; Leishmania donovani; Biology; Transcriptome; Microbiology; Miltefosine; Gene; Visceral leishmaniasis; Leishmaniasis; Gene expression; Genetics; Antibiotics; Aminoglycoside","authors":[{"name":"Aditya Verma","is_ca":false},{"name":"Vasundhra Bhandari","is_ca":false},{"name":"Deepak Kumar Deep","is_ca":false},{"name":"Shyam Sundar","is_ca":false},{"name":"Jean‐Claude Dujardin","is_ca":false},{"name":"Ruchi Singh","is_ca":false},{"name":"Poonam Salotra","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03204117717002988,"gpt":0.3651960733929264,"spread":0.3331548962228965,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007767783,0.0002576598,0.0005405989,0.0002984745,0.0007108891,0.0003547693,0.0005464731,0.00008972919,0.00001268233],"category_scores_gemma":[0.0005405231,0.0002170936,0.0001157397,0.00008501073,0.0003082019,0.0004068833,0.00008923373,0.0003571296,0.000004632024],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003507962,"about_ca_system_score_gemma":0.000160203,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003109879,"about_ca_topic_score_gemma":0.002709752,"domain_scores_codex":[0.9977267,0.00008307618,0.0005369966,0.0004861829,0.0006629038,0.0005041881],"domain_scores_gemma":[0.9982935,0.000210046,0.000355025,0.0002945512,0.0006285429,0.0002183902],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02904809,0.001637667,0.7476603,0.0002783693,0.002694536,0.004861147,0.0133513,0.00004033873,0.1569266,0.01912867,0.02169904,0.00267391],"study_design_scores_gemma":[0.02026624,0.0006019332,0.7620621,0.003225818,0.0001676556,0.0005495923,0.007734681,0.00008092518,0.1624551,0.004385734,0.03733554,0.001134686],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9825383,0.003337888,0.0002091917,0.01031248,0.0007583121,0.0006309536,0.00005154046,0.00002692994,0.00213436],"genre_scores_gemma":[0.9907296,0.0003730549,0.001998412,0.0002352131,0.0002525434,0.0001590815,0.00001525042,0.00003411323,0.006202763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0156365,"threshold_uncertainty_score":0.885282,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2312793398","doi":"10.1016/j.ijpddr.2016.04.001","title":"ABC-B transporter genes in Dirofilaria immitis","year":2016,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":26,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Bayer Animal Health; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"ATP-binding cassette transporter; Biology; Dirofilaria immitis; Gene; Genetics; Pseudogene; Genome; Transporter; Immunology; Helminths","authors":[{"name":"Catherine Bourguinat","is_ca":true},{"name":"Hua Che","is_ca":true},{"name":"Thangadurai Mani","is_ca":true},{"name":"Kathy Keller","is_ca":true},{"name":"Roger K. Prichard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01766132533943088,"gpt":0.3495589547628563,"spread":0.3318976294234254,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003187339,0.0001388816,0.0002160103,0.0001692918,0.0001143717,0.00005146037,0.0002103937,0.00008604887,0.0002239608],"category_scores_gemma":[0.00006035696,0.00009971176,0.0001182247,0.00004050501,0.00009619657,0.0002216414,0.00001418094,0.0001286502,0.00002665473],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007730952,"about_ca_system_score_gemma":0.00004073713,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002090139,"about_ca_topic_score_gemma":0.000335473,"domain_scores_codex":[0.9988338,0.00007833664,0.0004256354,0.0002375808,0.0001736707,0.0002509987],"domain_scores_gemma":[0.9992082,0.0002912342,0.0001487992,0.00009240269,0.0001639014,0.00009549915],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.01480072,0.0005283427,0.4987444,0.00007008083,0.0009053619,0.002931518,0.003267958,0.000006170729,0.04512767,0.06997018,0.03077814,0.3328694],"study_design_scores_gemma":[0.01028185,0.0001739136,0.2592985,0.0003724975,0.00004565632,0.001773439,0.0004083574,0.00006395413,0.001717663,0.02025053,0.7050434,0.0005701954],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9695138,0.001086394,0.006711306,0.01657781,0.003016286,0.0001741471,0.00008931158,0.00003110674,0.002799863],"genre_scores_gemma":[0.9931034,0.0004934059,0.0003507042,0.0004727589,0.0004025619,0.00004794784,0.000004053675,0.00001533056,0.005109808],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6742653,"threshold_uncertainty_score":0.4066128,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2811376198","doi":"10.1016/j.ijpddr.2018.07.001","title":"Off-target effects of tribendimidine, tribendimidine plus ivermectin, tribendimidine plus oxantel-pamoate, and albendazole plus oxantel-pamoate on the human gut microbiota","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Ivermectin; Gut flora; Albendazole; Pharmacology; Biology; Bacteroidetes; Medicine; Physiology; Veterinary medicine; Immunology; Bacteria; 16S ribosomal RNA","authors":[{"name":"Pierre H. H. Schneeberger","is_ca":false},{"name":"Jean T. Coulibaly","is_ca":false},{"name":"Morgan Gueuning","is_ca":false},{"name":"Wendelin Moser","is_ca":false},{"name":"Bryan Coburn","is_ca":true},{"name":"Jürg E. Frey","is_ca":false},{"name":"Jennifer Keiser","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008809515642560679,"gpt":0.3072570280961451,"spread":0.2984475124535844,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007295434,0.0004887983,0.0006998026,0.000266455,0.0007857597,0.0001132844,0.0007001737,0.0002929792,0.00004675822],"category_scores_gemma":[0.0002720725,0.0003812769,0.0002680372,0.0001455819,0.000620417,0.00003225015,0.0002097349,0.0004435846,0.000006516753],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001673042,"about_ca_system_score_gemma":0.0003046474,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005334533,"about_ca_topic_score_gemma":0.0003545245,"domain_scores_codex":[0.9971873,0.0002479172,0.0008742623,0.0007179459,0.0003026765,0.0006699417],"domain_scores_gemma":[0.9976109,0.0003826139,0.0007709592,0.0003808442,0.0006215429,0.0002331352],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.006610307,0.0002811312,0.001525868,0.0002859983,0.001017266,0.00008141213,0.001205439,0.00004700127,0.9114543,0.005979814,0.07047832,0.001033206],"study_design_scores_gemma":[0.02164992,0.002246333,0.02171669,0.0009235021,0.0003620111,0.001275289,0.0009262551,0.0003997321,0.6855131,0.003560504,0.2599661,0.001460618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9870045,0.005150831,0.000608172,0.003565832,0.001900653,0.000731464,0.0002985823,0.00001912581,0.0007208936],"genre_scores_gemma":[0.9907922,0.002662899,0.0004981539,0.0008932053,0.001030892,0.0000380757,0.0001824366,0.00005585032,0.003846316],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2259412,"threshold_uncertainty_score":0.9998639,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3132651865","doi":"10.1016/j.ijpddr.2021.02.004","title":"Evaluation of changes in drug susceptibility and population genetic structure in Haemonchus contortus following worm replacement as a means to reverse the impact of multiple-anthelmintic resistance on a sheep farm","year":2021,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Burroughs Wellcome Fund","keywords":"Biology; Haemonchus contortus; Population; Levamisole; Anthelmintic; Genotyping; Albendazole; Ivermectin; Genotype; Genetics; Veterinary medicine; Immunology; Gene; Helminths; Zoology; Medicine","authors":[{"name":"Melissa M. George","is_ca":false},{"name":"A.F. Vatta","is_ca":false},{"name":"Sue Howell","is_ca":false},{"name":"Bob Storey","is_ca":false},{"name":"Ciaran J. McCoy","is_ca":false},{"name":"Adrian J. Wolstenholme","is_ca":false},{"name":"Elizabeth Redman","is_ca":true},{"name":"John S. Gilleard","is_ca":true},{"name":"Ray M. Kaplan","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02888778837394997,"gpt":0.3926482588304472,"spread":0.3637604704564973,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001379258,0.0001599019,0.0003484993,0.000214962,0.00008708819,0.00003629291,0.0001401337,0.00006824,0.00003762266],"category_scores_gemma":[0.001247233,0.000126528,0.0001231769,0.0001475501,0.00005529703,0.000074224,0.00003322998,0.0001902763,3.636612e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004096539,"about_ca_system_score_gemma":0.0001478273,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001068027,"about_ca_topic_score_gemma":0.09180417,"domain_scores_codex":[0.9978718,0.0005033083,0.0005994446,0.0003175832,0.0005143786,0.0001934645],"domain_scores_gemma":[0.9983656,0.0005079321,0.000349113,0.0001927423,0.0005177615,0.00006683121],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02337729,0.0006052265,0.8814945,0.0001650961,0.0009874407,0.0002793417,0.01955158,0.003987078,0.02903867,0.001741445,0.0008636676,0.03790861],"study_design_scores_gemma":[0.005862581,0.0002649791,0.9794705,0.0006189456,0.0001106623,0.0001190911,0.002470624,0.003242556,0.001501636,0.005556501,0.0005624866,0.0002194757],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954022,0.0008998258,0.00008418187,0.002333659,0.0004578852,0.0005636524,0.00005777539,0.000004575819,0.0001962],"genre_scores_gemma":[0.9992027,0.00007543296,0.0002557147,0.0001529977,0.00006309225,0.00004696238,0.000009601749,0.00001048019,0.0001829759],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09797592,"threshold_uncertainty_score":0.924768,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2058389477","doi":"10.1016/j.ijpddr.2012.10.002","title":"Functional expression and characterization of the C. elegans G-protein-coupled FLP-2 Receptor (T19F4.1) in mammalian cells and yeast","year":2012,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"G protein-coupled receptor; Yeast; Heterologous expression; Biology; Caenorhabditis elegans; Receptor; Saccharomyces cerevisiae; Heterologous; Two-hybrid screening; Cell biology; Gene; Biochemistry; Recombinant DNA","authors":[{"name":"Martha J. Larsen","is_ca":false},{"name":"Elizabeth Ruiz Lancheros","is_ca":true},{"name":"Tracey Williams","is_ca":false},{"name":"David E. Lowery","is_ca":false},{"name":"Timothy G. Geary","is_ca":false},{"name":"Teresa M. Kubiak","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006405965523591341,"gpt":0.2439037145279418,"spread":0.2374977490043504,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002315811,0.0001046984,0.0001184723,0.00004756459,0.0001044915,0.00002833059,0.0001159354,0.00008626741,0.000008979629],"category_scores_gemma":[0.00003079762,0.0000843431,0.0000378167,0.00002524786,0.0001218179,0.00001947296,0.00006273637,0.00009684191,4.44336e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001255328,"about_ca_system_score_gemma":0.00002765691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006421245,"about_ca_topic_score_gemma":0.00004099094,"domain_scores_codex":[0.9992716,0.00005789138,0.000226743,0.0001608726,0.0001283867,0.0001544507],"domain_scores_gemma":[0.9995433,0.00001645041,0.0001801817,0.00008388316,0.0001105756,0.00006559788],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002539477,0.0000404639,0.02477064,0.00002048682,0.00002333283,4.029106e-7,0.0004680499,0.000006050601,0.9735609,0.0002541727,0.0003245217,0.0002770663],"study_design_scores_gemma":[0.00152459,0.00004592232,0.2103902,0.0001023877,0.00002069076,0.00006267315,0.0002676255,0.00007519611,0.7709149,0.0004467624,0.01594391,0.0002051128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952713,0.0009193302,0.001880525,0.000943847,0.0007756684,0.000144113,0.00003620494,0.000001881396,0.00002718937],"genre_scores_gemma":[0.997234,0.0004239631,0.0007209072,0.0001189347,0.0003255566,0.00001179122,0.00002934953,0.00001083624,0.001124588],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.202646,"threshold_uncertainty_score":0.3439412,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4229055135","doi":"10.1016/j.ijpddr.2022.05.001","title":"Nucleoside analogues for the treatment of animal trypanosomiasis","year":2022,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Infection and Immunity","funders":"Petroleum Technology Development Fund; Universiteit Antwerpen; Fonds Wetenschappelijk Onderzoek","keywords":"African trypanosomiasis; Biology; Trypanosomiasis; Pharmacology; Drug; Diminazene; Virology; Trypanosoma evansi; Toxicity; Medicine; Internal medicine","authors":[{"name":"Dorien Mabille","is_ca":false},{"name":"Kayhan Ilbeigi","is_ca":false},{"name":"Sarah Hendrickx","is_ca":false},{"name":"Marzuq A. Ungogo","is_ca":true},{"name":"Fabian Hulpia","is_ca":false},{"name":"Lin Cai","is_ca":false},{"name":"Louis Maes","is_ca":false},{"name":"Harry P. de Koning","is_ca":true},{"name":"Serge Van Calenbergh","is_ca":false},{"name":"Guy Caljon","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02736778623944952,"gpt":0.3821394144895571,"spread":0.3547716282501076,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005714922,0.00009424278,0.0002139721,0.000119926,0.0005272752,0.00003093307,0.0002169217,0.00002309962,0.00006245216],"category_scores_gemma":[0.0000929188,0.00006504622,0.0002057429,0.00007501393,0.0001519914,0.00004877475,0.00002757011,0.0001044576,7.353099e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001543576,"about_ca_system_score_gemma":0.0001271353,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001788548,"about_ca_topic_score_gemma":0.00005149274,"domain_scores_codex":[0.9990379,0.00003792264,0.0002944804,0.0001628152,0.000272958,0.0001939197],"domain_scores_gemma":[0.9985945,0.0006967147,0.000172151,0.0001336004,0.0003158945,0.00008716327],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.08200508,0.005612456,0.06366532,0.0002155234,0.008208863,0.0001953821,0.01143652,0.0002009519,0.1486361,0.1278815,0.3941615,0.1577809],"study_design_scores_gemma":[0.004026243,0.001261848,0.1224097,0.00001575735,0.0001335957,0.0004093404,0.001912913,0.0002945147,0.002982664,0.00290739,0.8635492,0.00009676544],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9385769,0.006518866,0.001432247,0.05071595,0.0007133358,0.0007861499,0.0006165255,0.00001387293,0.0006261047],"genre_scores_gemma":[0.9922974,0.001820877,0.001346491,0.0002683371,0.000347519,0.0003324861,0.00004377644,0.00001284448,0.003530308],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4693878,"threshold_uncertainty_score":0.4055428,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2002680294","doi":"10.1016/j.ijpddr.2011.10.003","title":"Inhibitors of RNA editing as potential chemotherapeutics against trypanosomatid pathogens","year":2011,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Trypanosoma brucei; RNA editing; Biology; Computational biology; RNA; Drug discovery; Mechanism (biology); Leishmania; Guide RNA; Gene; Genome editing; Bioinformatics; Genetics; Genome; Computer science","authors":[{"name":"Reza Salavati","is_ca":true},{"name":"Houtan Moshiri","is_ca":true},{"name":"Smriti Kala","is_ca":true},{"name":"Hamed S. Najafabadi","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03155995611872302,"gpt":0.3896457658594257,"spread":0.3580858097407027,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001089864,0.0003544125,0.001208405,0.0004361738,0.0002107424,0.00006841499,0.0004565802,0.0002987214,0.0000597662],"category_scores_gemma":[0.0002812337,0.0002888677,0.0006978076,0.0001521226,0.0003065499,0.0001153232,0.00008501366,0.0006441394,0.00001516238],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001565081,"about_ca_system_score_gemma":0.0005882432,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005227837,"about_ca_topic_score_gemma":0.000008314785,"domain_scores_codex":[0.9975027,0.0001041944,0.001124606,0.0003789392,0.0004888201,0.0004007317],"domain_scores_gemma":[0.9973319,0.0002703315,0.001044948,0.0002660928,0.0008050892,0.0002816805],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004033161,0.0002963582,0.00005129354,0.003381966,0.001786813,0.0001477212,0.0003716966,3.443405e-7,0.0006029482,0.003624073,0.01276161,0.9765719],"study_design_scores_gemma":[0.001011691,0.00007940983,0.0001353867,0.004460452,0.0004452869,0.001159897,0.000174272,0.000004665451,0.0002706592,0.001139136,0.9908934,0.0002257277],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001762896,0.9893903,0.0003477914,0.001125594,0.001857081,0.0007130319,0.0003416399,0.00002518005,0.004436519],"genre_scores_gemma":[0.002696597,0.9901106,0.001739571,0.000161516,0.001771724,0.00007221514,0.0001592091,0.00006202961,0.003226533],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9781318,"threshold_uncertainty_score":0.9999564,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W829650773","doi":"10.1016/j.ijpddr.2015.06.002","title":"In vitro flubendazole-induced damage to vital tissues in adult females of the filarial nematode Brugia malayi","year":2015,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Drugs for Neglected Diseases initiative; Fonds Québécois de la Recherche sur la Nature et les Technologies; McGill University; Michigan State University; Bill and Melinda Gates Foundation","keywords":"Brugia malayi; Ivermectin; Anthelmintic; Onchocerciasis; Pharmacology; Lymphatic filariasis; Bioavailability; Biology; Albendazole; Filariasis; In vivo; Brugia pahangi; Onchocerca; Diethylcarbamazine; Oral administration; Drug; Onchocerca volvulus; Immunology; Helminths; Zoology; Biotechnology","authors":[{"name":"Maeghan O’Neill","is_ca":true},{"name":"James Geary","is_ca":false},{"name":"Dalen Agnew","is_ca":false},{"name":"Charles D. Mackenzie","is_ca":false},{"name":"Timothy G. Geary","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02409323439509312,"gpt":0.3933800800621419,"spread":0.3692868456670487,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026873,0.0001300333,0.0003030244,0.0002185377,0.00004671035,0.00003371473,0.0002398515,0.00005573556,0.0000112526],"category_scores_gemma":[0.0004752534,0.0000937068,0.00009643198,0.0001213582,0.00008518196,0.0001235256,0.00006161763,0.0001923809,0.000005443845],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001661405,"about_ca_system_score_gemma":0.0002703943,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001325104,"about_ca_topic_score_gemma":0.0005714316,"domain_scores_codex":[0.99861,0.00009250751,0.000385499,0.0001986987,0.0004464266,0.0002668399],"domain_scores_gemma":[0.9989902,0.000162708,0.0001170386,0.000134615,0.0003437439,0.0002517086],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.06465471,0.0030586,0.8207205,0.0003157873,0.00107439,0.004405007,0.009287234,0.0001961135,0.05707471,0.01413551,0.02086725,0.004210189],"study_design_scores_gemma":[0.03826899,0.0006205133,0.822553,0.001850427,0.0001872612,0.001484918,0.005024371,0.0006553666,0.1068093,0.01323486,0.00865496,0.0006559888],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.985815,0.0004194379,0.0000498125,0.01167075,0.0006386665,0.0003680046,0.00006794392,0.00000445713,0.0009659515],"genre_scores_gemma":[0.9976077,0.00004625759,0.0007234871,0.0003345667,0.0001745092,0.00004071868,0.00001237809,0.00001049295,0.001049873],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04973458,"threshold_uncertainty_score":0.3821252,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4366752867","doi":"10.1016/j.ijpddr.2023.04.002","title":"Integration of ITS-2 rDNA nemabiome metabarcoding with Fecal Egg Count Reduction Testing (FECRT) reveals ivermectin resistance in multiple gastrointestinal nematode species, including hypobiotic Ostertagia ostertagi, in western Canadian beef cattle","year":2023,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":20,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Health Canada; University of Calgary; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Diabetes Foundation; Beef Cattle Research Council; Ministry of Agriculture - Saskatchewan; University of Saskatchewan","keywords":"Ivermectin; Ostertagia ostertagi; Biology; Eggs per gram; Anthelmintic; Feces; Veterinary medicine; Nematode; Animal science; Ecology; Medicine","authors":[{"name":"Eranga Lakshitha De Seram","is_ca":true},{"name":"Fabienne D. Uehlinger","is_ca":true},{"name":"Camila de Queiroz","is_ca":true},{"name":"Elizabeth Redman","is_ca":true},{"name":"John Campbell","is_ca":true},{"name":"Drue Nooyen","is_ca":true},{"name":"Arianna Morisetti","is_ca":true},{"name":"Colleen M Pollock","is_ca":true},{"name":"Samantha Ekanayake","is_ca":true},{"name":"G.B. Penner","is_ca":true},{"name":"John S. Gilleard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06047330843958504,"gpt":0.3462222570461977,"spread":0.2857489486066127,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001067118,0.0002775473,0.0004907923,0.0009874759,0.0002784124,0.0001314421,0.0002880853,0.00009345425,0.00001987071],"category_scores_gemma":[0.0009323562,0.0002635104,0.00008577127,0.0005372711,0.000140842,0.000424125,0.00004995497,0.0004625614,0.000009484496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006418162,"about_ca_system_score_gemma":0.0002574416,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003479569,"about_ca_topic_score_gemma":0.1591711,"domain_scores_codex":[0.9975165,0.0002267055,0.0009160309,0.0004482525,0.0003543538,0.0005381653],"domain_scores_gemma":[0.9978305,0.000803352,0.0005202988,0.0001397301,0.0005262008,0.0001799035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00625143,0.0002071831,0.8608034,0.0003795138,0.0001970955,0.001364768,0.005863996,0.000677227,0.1177196,0.00322531,0.00127628,0.002034199],"study_design_scores_gemma":[0.006537548,0.0003537624,0.9677609,0.004933993,0.00007004473,0.003878918,0.005251831,0.004490446,0.002674117,0.001009308,0.00229903,0.0007400903],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949244,0.0002276403,0.0006895802,0.002191214,0.0007350365,0.0004618862,0.00007165116,0.00003763436,0.0006609552],"genre_scores_gemma":[0.9965799,0.00003974903,0.001578206,0.00009178239,0.0001962534,0.0000622403,0.00003771255,0.00003295869,0.001381152],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1556915,"threshold_uncertainty_score":0.9999817,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3037128218","doi":"10.1016/j.ijpddr.2020.06.004","title":"Mode of action of a formulation containing hydrazones and saponins against leishmania spp. Role in mitochondria, proteases and reinfection process","year":2020,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Alberta Innovates - Technology Futures; European Regional Development Fund; Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)","keywords":"Hederagenin; Cassia; Saponin; Leishmania; Biology; Amastigote; Mode of action; Pharmacology; Leishmania braziliensis; Chemistry; Biochemistry; Leishmaniasis; Stereochemistry; Parasite hosting; Cutaneous leishmaniasis; Medicine; Immunology","authors":[{"name":"Yulieth Upegui","is_ca":false},{"name":"Fernando Echeverri","is_ca":false},{"name":"Winston Quiñones","is_ca":false},{"name":"Fernando Torres","is_ca":false},{"name":"Montserrat Nacher","is_ca":false},{"name":"Luís Rivas","is_ca":false},{"name":"Camila dos Santos Meira","is_ca":true},{"name":"Lashitew Gedamu","is_ca":true},{"name":"Gustavo Escobar","is_ca":false},{"name":"Rosendo Archbold","is_ca":false},{"name":"Iván Darío Vélez","is_ca":false},{"name":"Sara M. Robledo","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02143366472582082,"gpt":0.3657674706628508,"spread":0.34433380593703,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001693928,0.0001040554,0.0003203206,0.0001698755,0.00008302781,0.00002309711,0.00005465243,0.00005444029,0.000001797406],"category_scores_gemma":[0.0004244779,0.00009300366,0.0000417652,0.00007969104,0.0001098225,0.0002551074,0.00002771182,0.0001672157,1.2864e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004338461,"about_ca_system_score_gemma":0.00006624747,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004217131,"about_ca_topic_score_gemma":0.0002303631,"domain_scores_codex":[0.9989973,0.00004611068,0.000392961,0.0001909179,0.0002424423,0.0001303009],"domain_scores_gemma":[0.9989802,0.0001818956,0.0003054359,0.00004221689,0.0004091996,0.00008107396],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01939298,0.0002726306,0.8408538,0.001265385,0.0005834896,0.000066328,0.01202585,0.0004014442,0.1077821,0.002712571,0.0003172448,0.01432621],"study_design_scores_gemma":[0.01925772,0.001801589,0.7788897,0.002700282,0.0002350087,0.0005356817,0.01555283,0.02992829,0.1340813,0.01434594,0.002099779,0.0005718903],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938774,0.001250546,0.000590567,0.003541394,0.00008580673,0.0004216682,0.00001337844,0.000007657272,0.0002115774],"genre_scores_gemma":[0.9981264,0.0009548956,0.000626179,0.00007014716,0.0001154599,0.00003541997,0.000007721489,0.000009447148,0.00005425514],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06196413,"threshold_uncertainty_score":0.3792579,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4309962810","doi":"10.1016/j.ijpddr.2022.11.004","title":"Thiophene derivatives activity against the protozoan parasite Leishmania infantum","year":2022,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Hôtel-Dieu de Québec; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Canada Foundation for Innovation; University of Massachusetts","keywords":"Leishmania infantum; Leishmaniasis; Leishmania; Thiophene; Chemistry; EC50; Biochemistry; Biology; Pharmacology; Parasite hosting; In vitro; Visceral leishmaniasis; Immunology; Organic chemistry","authors":[{"name":"Sophia Bigot","is_ca":true},{"name":"Philippe Leprohon","is_ca":true},{"name":"Abimael Vasquez","is_ca":false},{"name":"Rohit Bhadoria","is_ca":false},{"name":"Rachid Skouta","is_ca":false},{"name":"Marc Ouellette","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01827684084308718,"gpt":0.3505124937677881,"spread":0.332235652924701,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0009753164,0.0002048962,0.0003611491,0.0001741909,0.001431061,0.0001244762,0.0004869587,0.00003970005,0.0000490293],"category_scores_gemma":[0.0003793754,0.0001468863,0.0001763908,0.0001524596,0.0003512859,0.0001992893,0.0002715153,0.0007616547,0.000003563307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002301327,"about_ca_system_score_gemma":0.0002046468,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001594225,"about_ca_topic_score_gemma":0.00007125916,"domain_scores_codex":[0.9978049,0.0002803312,0.0003643861,0.0003433567,0.0008126395,0.0003943716],"domain_scores_gemma":[0.9982782,0.0005758594,0.0003218492,0.0002156143,0.0004736298,0.0001348337],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.03571466,0.002206003,0.5696873,0.0003923147,0.006810628,0.002113344,0.02263818,0.0003200049,0.03575464,0.03533905,0.2405194,0.04850445],"study_design_scores_gemma":[0.006264877,0.0004334692,0.40579,0.0001632713,0.0001229437,0.001554403,0.004940277,0.0003601124,0.00554669,0.009167884,0.5651507,0.000505346],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9396117,0.001599354,0.0002271609,0.05329513,0.0009125067,0.0009716859,0.00005500152,0.00003161891,0.003295858],"genre_scores_gemma":[0.9912853,0.0006891874,0.0004847003,0.001316143,0.0004342687,0.0005944215,0.00001286065,0.00002544186,0.005157727],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3246313,"threshold_uncertainty_score":0.9998689,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2529745594","doi":"10.1016/j.ijpddr.2016.09.005","title":"Profiling the macrofilaricidal effects of flubendazole on adult female Brugia malayi using RNAseq","year":2016,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; McGill University; Fonds Québécois de la Recherche sur la Nature et les Technologies; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Brugia malayi; Biology; Ivermectin; Pharmacology; Onchocerciasis; Anthelmintic; Transcriptome; Lymphatic filariasis; Drug; Filariasis; Immunology; Gene expression; Gene; Helminths; Genetics","authors":[{"name":"Maeghan O’Neill","is_ca":true},{"name":"Cristina Ballesteros","is_ca":true},{"name":"Lucienne Tritten","is_ca":true},{"name":"Erica Burkman","is_ca":false},{"name":"Weam I. Zaky","is_ca":false},{"name":"Jianguo Xia","is_ca":true},{"name":"Andrew R. Moorhead","is_ca":false},{"name":"Steven A. Williams","is_ca":false},{"name":"Timothy G. Geary","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01171126567940686,"gpt":0.3630537210245856,"spread":0.3513424553451788,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001885497,0.0001467818,0.0002493678,0.000122113,0.0001793915,0.00003132394,0.0001825201,0.00004891684,0.0000177221],"category_scores_gemma":[0.0003626416,0.00007826662,0.0001601327,0.00005508108,0.0002071613,0.00008188738,0.00003221447,0.0001353431,0.000006095939],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001244588,"about_ca_system_score_gemma":0.0001639249,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001013423,"about_ca_topic_score_gemma":0.000008164608,"domain_scores_codex":[0.9986845,0.00007796483,0.0003004871,0.0002131342,0.000434884,0.00028902],"domain_scores_gemma":[0.9983147,0.0007248581,0.000187108,0.0001480876,0.0004497094,0.0001755684],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.03287926,0.002391223,0.7244627,0.0009467914,0.004987393,0.003132839,0.001261457,0.00005271228,0.1221049,0.06016957,0.007460466,0.04015065],"study_design_scores_gemma":[0.04037474,0.001672434,0.282156,0.006174318,0.001122687,0.002851777,0.001310224,0.001022788,0.6398606,0.01351028,0.00904686,0.0008973283],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9912239,0.00132526,0.001440266,0.004269081,0.0006110062,0.0003926007,0.00007320999,0.000009955091,0.0006547255],"genre_scores_gemma":[0.9961949,0.0003666873,0.001173884,0.0003019033,0.0002538165,0.00003265856,0.000007069645,0.00001485941,0.001654218],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5177557,"threshold_uncertainty_score":0.319162,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2085460412","doi":"10.1016/j.ijpddr.2014.09.002","title":"WIPO Re:Search: Accelerating anthelmintic development through cross-sector partnerships","year":2014,"lang":"en","type":"review","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Kwame Nkrumah University of Science and Technology; McGill University; University of California, San Francisco; Theodor Bilharz Research Institute; AstraZeneca","keywords":"General partnership; Intellectual property; Business; Product (mathematics); Public relations; Neglected tropical diseases; Political science; Medicine; Public health; Finance","authors":[{"name":"Roopa Ramamoorthi","is_ca":false},{"name":"Katy Graef","is_ca":false},{"name":"Jennifer Dent","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1417003953419825,"gpt":0.4522363727959093,"spread":0.3105359774539269,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008256186,0.000567789,0.001462095,0.0002974581,0.00102772,0.0003642251,0.0009202849,0.0005209529,0.0003494112],"category_scores_gemma":[0.0002385208,0.0004646053,0.000557958,0.0001062554,0.0003939735,0.0002836262,0.0001547381,0.001211462,0.0002851154],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002529246,"about_ca_system_score_gemma":0.0004184782,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001237592,"about_ca_topic_score_gemma":0.0001311272,"domain_scores_codex":[0.996648,0.0004357171,0.001398502,0.0006761018,0.0001616321,0.0006800998],"domain_scores_gemma":[0.9965677,0.00161787,0.0009842382,0.0002756849,0.0004675554,0.00008691407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001781085,0.0007792347,0.002633948,0.006284324,0.01201342,0.0002660666,0.006113371,0.0000133626,0.0001860348,0.0249644,0.0928517,0.8521131],"study_design_scores_gemma":[0.0008374854,0.00003480864,0.00008000166,0.003111189,0.0002146803,0.0008812037,0.0001183218,0.000001420436,0.0001570869,0.0004290774,0.9936653,0.0004694039],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002092113,0.9863731,0.001054596,0.0005335407,0.006404961,0.0005126463,0.0001733323,0.0000520233,0.002803647],"genre_scores_gemma":[0.005172873,0.9694535,0.001841239,0.0002438306,0.000845212,0.0001732927,0.0005281405,0.000083074,0.0216588],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9008136,"threshold_uncertainty_score":0.9997806,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4398174408","doi":"10.1016/j.ijpddr.2024.100549","title":"First case of macrocyclic lactone-resistant Dirofilaria immitis in Europe - Cause for concern","year":2024,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Dirofilaria immitis; Lactone; Biology; Chemistry; Zoology; Stereochemistry; Helminths","authors":[{"name":"Donato Traversa","is_ca":false},{"name":"Αnastasia Diakou","is_ca":false},{"name":"Mariasole Colombo","is_ca":false},{"name":"Sohini Kumar","is_ca":true},{"name":"Thavy Long","is_ca":true},{"name":"Serafeim C. Chaintoutis","is_ca":false},{"name":"Luigi Venco","is_ca":false},{"name":"Gianluca Betti Miller","is_ca":false},{"name":"Roger K. Prichard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02239284223783285,"gpt":0.4007131273026981,"spread":0.3783202850648653,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002492611,0.0001582984,0.0003310874,0.0002466837,0.0001088454,0.00008103559,0.0001252558,0.00005807251,0.00003413687],"category_scores_gemma":[0.0003105217,0.0001298741,0.0001518643,0.0001292332,0.0001670831,0.0001174089,0.00002797009,0.0001715608,0.00000428969],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001504114,"about_ca_system_score_gemma":0.0002492442,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001038931,"about_ca_topic_score_gemma":0.0009487026,"domain_scores_codex":[0.9986802,0.00004505179,0.0004510937,0.0002875652,0.0002337949,0.0003023159],"domain_scores_gemma":[0.9983957,0.0007763579,0.000105472,0.0001140049,0.0003977443,0.000210714],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"case_report","study_design_gemma":"not_applicable","study_design_scores_codex":[0.08269668,0.004132444,0.1645415,0.005732375,0.01374873,0.3148563,0.008622117,0.0001548587,0.01008091,0.2389624,0.1193372,0.03713455],"study_design_scores_gemma":[0.05399821,0.002425015,0.1437669,0.0089536,0.002366868,0.05219532,0.00344805,0.008346434,0.0134917,0.0327577,0.676469,0.001781184],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9728444,0.01404021,0.0009320246,0.008886304,0.0009713433,0.0006329142,0.0007672021,0.00002210262,0.0009035446],"genre_scores_gemma":[0.9942889,0.001383976,0.0008254474,0.000101311,0.0002056475,0.00009715368,0.00005484144,0.00002379142,0.00301899],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5571318,"threshold_uncertainty_score":0.5296111,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2280492033","doi":"10.1016/j.ijpddr.2016.02.003","title":"Scaffold proteins LACK and TRACK as potential drug targets in kinetoplastid parasites: Development of inhibitors","year":2016,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; McGill University","funders":"Fogarty International Center; National Heart, Lung, and Blood Institute; U.S. Public Health Service; Universidade de São Paulo; National Institutes of Health; National Institute of Allergy and Infectious Diseases; Louisiana State University","keywords":"Biology; Drug development; Leishmania; Drug design; Kinase; Drug discovery; Peptide; Cell biology; Trypanosoma; Amastigote; Protein kinase A; Drug; Pharmacology; Parasite hosting; Virology; Biochemistry","authors":[{"name":"Nir Qvit","is_ca":false},{"name":"Deborah Schechtman","is_ca":false},{"name":"Darlene Aparecida Pena","is_ca":false},{"name":"Denise A. Berti","is_ca":false},{"name":"Chrislaine Oliveira Soares","is_ca":false},{"name":"Qianqian Miao","is_ca":true},{"name":"Liying Liang","is_ca":true},{"name":"Lauren A. Baron","is_ca":false},{"name":"Christian Teh‐Poot","is_ca":false},{"name":"Pedro Pablo Martínez-Vega","is_ca":false},{"name":"María Jesús Ramírez-Sierra","is_ca":false},{"name":"Eric N. Churchill","is_ca":false},{"name":"Anna D. Cunningham","is_ca":false},{"name":"Andrey V. Malkovskiy","is_ca":false},{"name":"Nancy A. Federspiel","is_ca":false},{"name":"Fábio C. Gozzo","is_ca":false},{"name":"Ana Cláudia Torrecilhas","is_ca":false},{"name":"Maria Júlia Manso Alves","is_ca":false},{"name":"Armando Jardim","is_ca":true},{"name":"Momar Ndao","is_ca":true},{"name":"Eric Dumonteil","is_ca":false},{"name":"Daria Mochly‐Rosen","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01501805337991723,"gpt":0.33843988374318,"spread":0.3234218303632628,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005715654,0.0001916075,0.0004209133,0.000323651,0.0001416655,0.00003583783,0.0001694128,0.00007216499,0.00002540597],"category_scores_gemma":[0.0003835625,0.0001326517,0.00008254507,0.00008068744,0.0002936993,0.0001938166,0.00007812998,0.0001773804,0.000005624867],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001379527,"about_ca_system_score_gemma":0.0002224588,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001318896,"about_ca_topic_score_gemma":0.0002864636,"domain_scores_codex":[0.998094,0.0000708406,0.0006575764,0.0003239608,0.0005169676,0.0003366821],"domain_scores_gemma":[0.9986867,0.0003050032,0.0002793762,0.00009585803,0.0004604877,0.0001725197],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01794333,0.001477669,0.7535126,0.0007078811,0.002111558,0.001398853,0.01309043,0.00001703877,0.09389367,0.006346574,0.03519697,0.07430349],"study_design_scores_gemma":[0.02041904,0.0004061149,0.7363915,0.003451705,0.0001161179,0.001331024,0.002410194,0.00005319299,0.1354863,0.009297161,0.08985193,0.0007856638],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9815377,0.002451941,0.0006260693,0.01405229,0.000416858,0.0004477596,0.00001909217,0.00001204916,0.0004362121],"genre_scores_gemma":[0.9898658,0.0009670084,0.005402505,0.0001207942,0.0002285842,0.0000596854,0.000004654058,0.00001816824,0.003332793],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07351783,"threshold_uncertainty_score":0.540938,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3033790833","doi":"10.1016/j.ijpddr.2020.05.002","title":"Identification of annotated bioactive molecules that impair motility of the blood fluke Schistosoma mansoni","year":2020,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Merck KGaA","keywords":"Schistosoma mansoni; Praziquantel; Biology; Pharmacology; Schistosoma; Motility; Schistosomiasis; Immunology; Helminths; Cell biology","authors":[{"name":"Thomas Duguet","is_ca":true},{"name":"Anastasia Glebov","is_ca":true},{"name":"Asimah Hussain","is_ca":true},{"name":"Shashank Kulkarni","is_ca":false},{"name":"Igor Mochalkin","is_ca":false},{"name":"Timothy G. Geary","is_ca":true},{"name":"Mohammed H. Rashid","is_ca":true},{"name":"Thomas Spangenberg","is_ca":false},{"name":"Paula Ribeiro","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01105465833109251,"gpt":0.2994517681140911,"spread":0.2883971097829985,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001654935,0.0001224306,0.0002463788,0.00007362494,0.000193566,0.00001826455,0.0003905922,0.00009307149,0.00003026643],"category_scores_gemma":[0.000171154,0.00009355013,0.0001838643,0.00008194053,0.0003459947,0.000122133,0.00005086098,0.0002689328,0.000004249019],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002359582,"about_ca_system_score_gemma":0.00006804456,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003204535,"about_ca_topic_score_gemma":0.00004342754,"domain_scores_codex":[0.9989483,0.0001405556,0.0004796717,0.0002034738,0.0000815088,0.0001464432],"domain_scores_gemma":[0.9985538,0.0002223533,0.0006625467,0.0001259971,0.0004057235,0.00002957995],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002366588,0.0004069569,0.1050716,0.00006991439,0.001710268,0.000008625671,0.003876472,0.00005581889,0.8699722,0.0100848,0.005267858,0.001108856],"study_design_scores_gemma":[0.002396311,0.0001003458,0.2382712,0.0001079761,0.0002284561,0.0002247382,0.001190691,0.00009271942,0.7415272,0.002457834,0.01322916,0.0001734116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9887418,0.002095258,0.001101941,0.006123438,0.001167938,0.000179554,0.0003375981,0.00001128954,0.0002411658],"genre_scores_gemma":[0.9984999,0.0001830072,0.0001238326,0.0001452652,0.00003903422,0.00001037847,0.000021871,0.000007956179,0.0009687308],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1331996,"threshold_uncertainty_score":0.3814864,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2172644304","doi":"10.1016/j.ijpddr.2015.09.001","title":"Pharmacokinetic comparison of different flubendazole formulations in pigs: A further contribution to its development as a macrofilaricide molecule","year":2015,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":14,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Agencia Nacional de Promoción Científica y Tecnológica; Drugs for Neglected Diseases initiative; Consejo Nacional de Investigaciones Científicas y Técnicas; Bill and Melinda Gates Foundation","keywords":"Pharmacology; Metabolite; Cmax; Pharmacokinetics; In vivo; Oral administration; Chemistry; Anthelmintic; Ivermectin; Bioavailability; Active metabolite; Chromatography; Medicine; Veterinary medicine; Biochemistry; Biology; Biotechnology","authors":[{"name":"Laura Ceballos","is_ca":false},{"name":"Luis Ignacio Ortega Álvarez","is_ca":false},{"name":"Charles D. Mackenzie","is_ca":false},{"name":"Timothy G. Geary","is_ca":true},{"name":"Carlos Lanusse","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03744019832682279,"gpt":0.4121073505568869,"spread":0.3746671522300641,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002871079,0.0001379644,0.0002779747,0.0002381544,0.00008277862,0.00004003975,0.000170951,0.00005695577,0.00004893595],"category_scores_gemma":[0.0001845313,0.0001252342,0.00006376692,0.00008367729,0.00002624195,0.00009411285,0.0000422929,0.0001548484,0.00002091579],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001856273,"about_ca_system_score_gemma":0.00009532973,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001238009,"about_ca_topic_score_gemma":0.0001647878,"domain_scores_codex":[0.9986607,0.00008938864,0.0005804467,0.000178093,0.0002706318,0.0002207458],"domain_scores_gemma":[0.9989216,0.0001320794,0.0002264599,0.00006392956,0.000489594,0.0001663337],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.05156804,0.004917539,0.5760156,0.000282781,0.002434559,0.0005998642,0.06383019,0.0029074,0.1228704,0.08358995,0.02899726,0.06198641],"study_design_scores_gemma":[0.04669914,0.001779135,0.4113117,0.001303723,0.0002666048,0.001148349,0.00562491,0.02333765,0.123321,0.01769666,0.365444,0.002067068],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9861513,0.0005611627,0.008645342,0.002647215,0.0007546449,0.0003451673,0.00002718829,0.00001482698,0.0008530963],"genre_scores_gemma":[0.9984375,0.00001301164,0.000492372,0.0003147007,0.00008742083,0.00008721479,0.00001825835,0.0000111013,0.0005383804],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3364468,"threshold_uncertainty_score":0.5106902,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4385156447","doi":"10.1016/j.ijpddr.2023.07.002","title":"Droplet digital PCR as a tool to detect resistant isolates of Dirofilaria immitis","year":2023,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; National Institute of Allergy and Infectious Diseases; National Center for Veterinary Parasitology","keywords":"Dirofilaria immitis; Biology; Single-nucleotide polymorphism; Digital polymerase chain reaction; Drug resistance; Allele; SNP; Genetics; Polymerase chain reaction; Genotype; Virology; Gene; Immunology","authors":[{"name":"Sohini Kumar","is_ca":true},{"name":"Roger K. Prichard","is_ca":true},{"name":"Thavy Long","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01129036725288991,"gpt":0.353755001896873,"spread":0.3424646346439831,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002256696,0.0001639594,0.0003426528,0.0003226007,0.0001391381,0.0001075525,0.000201892,0.000056527,0.00004759796],"category_scores_gemma":[0.0006843879,0.000135999,0.000195757,0.0001856599,0.0001198934,0.000140081,0.00006574862,0.0001380651,0.00006492331],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001031763,"about_ca_system_score_gemma":0.0002089707,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002112304,"about_ca_topic_score_gemma":0.00002922202,"domain_scores_codex":[0.9984505,0.00003468579,0.0004211694,0.0002787766,0.0004467175,0.0003681355],"domain_scores_gemma":[0.9985331,0.0004208511,0.0001359216,0.0001564724,0.0004291039,0.0003245271],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.1302838,0.002273017,0.2033772,0.0009792292,0.0123152,0.01692224,0.005798698,0.0001085827,0.06399579,0.05025966,0.3014755,0.212211],"study_design_scores_gemma":[0.02479405,0.003302516,0.5581351,0.002205404,0.000682003,0.003001997,0.003072545,0.000481431,0.02168029,0.08215512,0.2991418,0.001347757],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9880639,0.0009017257,0.0003757572,0.007233181,0.0004695036,0.0003851969,0.0004148463,0.00003627041,0.002119664],"genre_scores_gemma":[0.9901451,0.000392588,0.0008578463,0.0002158948,0.0001719848,0.0000653387,0.00007475138,0.00002048017,0.008055992],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3547578,"threshold_uncertainty_score":0.554588,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2893817088","doi":"10.1016/j.ijpddr.2018.09.004","title":"Molecular and pharmacological characterization of an acetylcholine-gated chloride channel (ACC-2) from the parasitic nematode Haemonchus contortus","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Cholinesterase and Neurodegenerative Diseases","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ontario Institute of Technology","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Haemonchus contortus; Biology; Acetylcholine receptor; Cholinergic; Biochemistry; Receptor; Acetylcholine; Ligand-gated ion channel; Chloride channel; Chemistry; Ion channel; Pharmacology; Endocrinology; Nematode","authors":[{"name":"Sarah A. Habibi","is_ca":true},{"name":"Micah K. Callanan","is_ca":true},{"name":"Sean G. Forrester","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01827251935931328,"gpt":0.3559404068579606,"spread":0.3376678874986473,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001546953,0.0001568654,0.0002899414,0.00006056993,0.0001700772,0.00005575492,0.0001536418,0.00006202854,0.00001745483],"category_scores_gemma":[0.0001592948,0.0001091639,0.00007723579,0.00005364018,0.0002901098,0.0001643661,0.00002382146,0.0001473465,9.438714e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002118686,"about_ca_system_score_gemma":0.00005964889,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001516747,"about_ca_topic_score_gemma":0.00003535793,"domain_scores_codex":[0.9988972,0.00009825229,0.0003638867,0.0002610969,0.0002129121,0.0001666432],"domain_scores_gemma":[0.9986869,0.0002507137,0.0002464927,0.0001056066,0.0005502449,0.0001600772],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.01685035,0.0007568537,0.03368174,0.00005160311,0.00110155,0.000526884,0.002887351,0.00001271837,0.9385028,0.001353644,0.0011506,0.003123838],"study_design_scores_gemma":[0.009212408,0.0003803678,0.2266419,0.0002909998,0.0006007262,0.0007104287,0.0004306766,0.002861113,0.7521435,0.001514081,0.004862597,0.0003511614],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923845,0.0006688306,0.0009195529,0.004845674,0.0006891144,0.0002810486,0.0001563471,0.00001458954,0.00004037645],"genre_scores_gemma":[0.9957985,0.0004235269,0.0001179487,0.00246163,0.0009037986,0.00001890198,0.0001498217,0.00001388925,0.0001119447],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1929602,"threshold_uncertainty_score":0.4451573,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2809073582","doi":"10.1016/j.ijpddr.2018.06.003","title":"Characterization of Divalent Metal Transporter 1 (DMT1) in Brugia malayi suggests an intestinal-associated pathway for iron absorption","year":2018,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Parasitic Diseases Research and Treatment","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; McGill University; Michigan State University","keywords":"Brugia malayi; DMT1; Biology; Lymphatic filariasis; Iron deficiency; Ferroportin; Onchocerciasis; Ferritin; Onchocerca; Transporter; Onchocerca volvulus; Filariasis; Gene; Microbiology; Genetics; Helminths; Biochemistry; Immunology; Medicine; Iron homeostasis","authors":[{"name":"Cristina Ballesteros","is_ca":true},{"name":"James Geary","is_ca":false},{"name":"Charles D. Mackenzie","is_ca":false},{"name":"Timothy G. Geary","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01538356515897584,"gpt":0.3506601718015588,"spread":0.335276606642583,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003563396,0.0001452229,0.0003050851,0.0002195752,0.0000860352,0.00002841689,0.0001257599,0.00006824503,0.00003531816],"category_scores_gemma":[0.000143858,0.0001249317,0.0001264507,0.00007294106,0.0001587232,0.0001974377,0.00001027057,0.0001089191,0.000002013143],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001405559,"about_ca_system_score_gemma":0.0001384723,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001664225,"about_ca_topic_score_gemma":0.0002783509,"domain_scores_codex":[0.9986567,0.00006564528,0.0004555435,0.0002486204,0.0003085971,0.0002649121],"domain_scores_gemma":[0.9987049,0.0001338153,0.000251449,0.00009671784,0.0006372799,0.0001758909],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02939057,0.004377417,0.7759991,0.0003377085,0.00116628,0.0003624134,0.003375804,0.00000895454,0.1577056,0.00474982,0.0004758373,0.02205046],"study_design_scores_gemma":[0.007440452,0.0008997347,0.972513,0.0004224344,0.0001509003,0.000128912,0.0001794076,0.0006096733,0.01425635,0.001788883,0.001430175,0.000180133],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952692,0.0001713335,0.001905643,0.001385472,0.0003892809,0.0004956474,0.0002287895,0.00001186693,0.0001427405],"genre_scores_gemma":[0.9974881,0.0001414603,0.0006278922,0.000101159,0.0002203043,0.0000775567,0.0004643631,0.00001622183,0.0008629173],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1965139,"threshold_uncertainty_score":0.5094566,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4405679901","doi":"10.1016/j.ijpddr.2024.100576","title":"Quantitative DNA metabarcoding reveals species composition of a macrocyclic lactone and pyrantel resistant cyathostomin population in the UK","year":2024,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Helminth infection and control","field":"Veterinary","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Horserace Betting Levy Board","keywords":"Pyrantel; DNA; Chemistry; Population; Biology; Biochemistry; Medicine; Ecology; Anthelmintic","authors":[{"name":"Katie Bull","is_ca":false},{"name":"Jane E. Hodgkinson","is_ca":false},{"name":"Kate Allen","is_ca":false},{"name":"Jocelyn Poissant","is_ca":true},{"name":"Laura Peachey","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03692500294445972,"gpt":0.3898072934224033,"spread":0.3528822904779436,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008365702,0.0001250918,0.0002474814,0.0002549885,0.0001494683,0.000140789,0.0001384289,0.00005386918,0.00002117554],"category_scores_gemma":[0.0001169901,0.00009372801,0.00008454601,0.0001128259,0.00011027,0.0001941141,0.0000207385,0.0002096407,0.000001951036],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006282887,"about_ca_system_score_gemma":0.00002120386,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005569696,"about_ca_topic_score_gemma":0.0002622514,"domain_scores_codex":[0.9987206,0.0002119933,0.0004881791,0.0002022451,0.000225209,0.0001516995],"domain_scores_gemma":[0.9986877,0.0008725155,0.0001851586,0.00007024749,0.0001477289,0.00003659693],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","study_design_scores_codex":[0.0146527,0.000244791,0.04888987,0.0004214413,0.0007819913,0.000843077,0.01699289,0.00001964545,0.28118,0.6259412,0.004294442,0.005737979],"study_design_scores_gemma":[0.005280032,0.000680474,0.8841712,0.002412926,0.0002938769,0.002931365,0.009632403,0.00303338,0.003332922,0.05839641,0.02908865,0.0007463765],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9884012,0.00332744,0.001246995,0.005320405,0.0006265268,0.0002148701,0.00008883023,0.00001343515,0.000760236],"genre_scores_gemma":[0.9983889,0.000310081,0.0005654588,0.0001698062,0.000124443,0.00002686692,0.0000169788,0.00001006826,0.0003874288],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8352813,"threshold_uncertainty_score":0.3822117,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2196235223","doi":"10.1016/j.ijpddr.2015.09.003","title":"Histone deacetylase enzymes as drug targets for the control of the sheep blowfly, Lucilia cuprina","year":2015,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Medical Research Council; National Health and Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Australian Wool Innovation","keywords":"Lucilia cuprina; Biology; Histone deacetylase; Drosophila melanogaster; Melanogaster; Calliphoridae; Lucilia; Trichostatin A; Juvenile hormone; Gene; Histone; Genetics; Toxicology; Insect; Larva; Botany","authors":[{"name":"Andrew C. Kotze","is_ca":false},{"name":"Barney M. Hines","is_ca":false},{"name":"Neil H. Bagnall","is_ca":false},{"name":"Clare A. Anstead","is_ca":false},{"name":"Praveer Gupta","is_ca":false},{"name":"Robert C. Reid","is_ca":false},{"name":"Angela P. Ruffell","is_ca":false},{"name":"David P. Fairlie","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007523903317992875,"gpt":0.3112179780168825,"spread":0.3036940746988896,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005617087,0.0001697043,0.0002074969,0.00003748363,0.0002721378,0.00004372796,0.0006060301,0.00009044681,0.000004489446],"category_scores_gemma":[0.0003484117,0.0001093919,0.0002187336,0.00003982844,0.0002891259,0.00000951317,0.00006646228,0.0001380099,0.000001185451],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004089747,"about_ca_system_score_gemma":0.0002402116,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002183706,"about_ca_topic_score_gemma":0.0004552418,"domain_scores_codex":[0.9987907,0.0000837589,0.00036305,0.0002422001,0.0002709865,0.0002492495],"domain_scores_gemma":[0.9984337,0.0001822262,0.0003280739,0.000245005,0.0007182051,0.00009277418],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.02825755,0.0008106718,0.03252002,0.0002368933,0.003852509,0.00004919632,0.005447262,0.002330778,0.1158205,0.05474028,0.7437572,0.01217711],"study_design_scores_gemma":[0.005973484,0.0001870718,0.003949288,0.00006725989,0.0001805579,0.0001847681,0.0009191868,0.0002860845,0.1620784,0.01087988,0.814948,0.0003460097],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9339637,0.03698203,0.0107577,0.01352151,0.003202917,0.0006597703,0.0001699045,0.00000704412,0.0007354328],"genre_scores_gemma":[0.9884638,0.0006529519,0.0007013744,0.0008780329,0.00058804,0.00006439677,0.00001457468,0.00001821119,0.008618638],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07119086,"threshold_uncertainty_score":0.4460872,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2608595334","doi":"10.1016/j.ijpddr.2017.04.004","title":"Polymorphism in ABC transporter genes of Dirofilaria immitis","year":2017,"lang":"en","type":"article","venue":"International Journal for Parasitology Drugs and Drug Resistance","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"ATP-binding cassette transporter; Biology; Dirofilaria immitis; Single-nucleotide polymorphism; Efflux; Drug resistance; Gene; Transporter; Genetics; Genotyping; Genotype; Immunology","authors":[{"name":"Thangadurai Mani","is_ca":true},{"name":"Catherine Bourguinat","is_ca":true},{"name":"Roger K. Prichard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01161275820496154,"gpt":0.3324889615085428,"spread":0.3208762033035813,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003296302,0.0001615498,0.0004348376,0.0001869531,0.000223651,0.00004878881,0.0003446522,0.0001109928,0.0000426114],"category_scores_gemma":[0.0000382875,0.0001362495,0.0001873259,0.00002807052,0.0002541055,0.0001748548,0.00001485016,0.0002105265,0.000001402707],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004041104,"about_ca_system_score_gemma":0.00009356227,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000497502,"about_ca_topic_score_gemma":0.0005758441,"domain_scores_codex":[0.9986624,0.00001987337,0.000528994,0.0002445898,0.0002973557,0.0002467647],"domain_scores_gemma":[0.9989637,0.00007018583,0.0003879271,0.0002233564,0.0002363655,0.0001184486],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01145071,0.0007173048,0.8629572,0.0003893504,0.001030216,0.002731171,0.003420174,0.00001006805,0.03597777,0.0442035,0.002952791,0.03415973],"study_design_scores_gemma":[0.01055419,0.0001061034,0.9076331,0.00101044,0.0002034228,0.0005493225,0.0006677139,0.00005219556,0.02180637,0.01535116,0.04166961,0.00039641],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9804558,0.00316962,0.001332253,0.01022627,0.002094215,0.0002331229,0.00007414084,0.00001054191,0.002403999],"genre_scores_gemma":[0.9903306,0.001410294,0.002486022,0.000156153,0.000272244,0.00001701461,0.00001962593,0.00001892558,0.005289141],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04467585,"threshold_uncertainty_score":0.5556092,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}