{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":196,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":196,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"ec39f604bbd5","filters":{"venue":"International Journal of Antimicrobial Agents"}},"results":[{"id":"W2087341525","doi":"10.1016/j.ijantimicag.2009.11.003","title":"Molecular epidemiology of Escherichia coli producing CTX-M β-lactamases: the worldwide emergence of clone ST131 O25:H4","year":2010,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":442,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"clone (Java method); Escherichia coli; Epidemiology; Urinary system; Molecular epidemiology; Microbiology; Biology; Antibiotics; Medicine; Genotype; Internal medicine; Genetics; Gene","authors":[{"name":"Gisele Peirano","is_ca":true},{"name":"Johann Pitout","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03218028358419908,"gpt":0.3445788617131109,"spread":0.3123985781289118,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000662958,0.0007137967,0.001208789,0.001370976,0.0001211559,0.0007187723,0.0009159956,0.001155617,0.00108942],"category_scores_gemma":[0.001066299,0.0002329541,0.000292037,0.001667486,0.0004521456,0.0008253472,0.0003557039,0.001039556,0.0009569277],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005971555,"about_ca_system_score_gemma":0.0009523518,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001692378,"about_ca_topic_score_gemma":0.002138403,"domain_scores_codex":[0.9997864,0.00003242279,0.00002853067,0.00004659603,0.00008715119,0.00001898597],"domain_scores_gemma":[0.9992342,0.000287178,0.0001380623,0.00001877659,0.0002656538,0.00005619421],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009161784,0.00005012484,0.0009576173,0.005674924,0.00004706557,0.0002156999,0.00003141234,0.0002349197,0.003005439,0.0008375251,0.01596477,0.9728889],"study_design_scores_gemma":[0.00004512133,0.0003339268,0.01006048,0.004167316,0.0002587291,0.004650201,0.0001347927,0.0002268881,0.003005065,0.001457492,0.9756123,0.00004776114],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004388865,0.9982359,0.0002605302,0.0003609991,0.0001640862,0.00000311724,0.00002542113,0.000006319009,0.0005046543],"genre_scores_gemma":[0.001629316,0.997261,0.0003603598,0.0001719907,0.0001818254,0.000003715776,0.00003858109,0.000001167837,0.0003519966],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.001692378,"threshold_uncertainty_score":0.004332662,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2043231579","doi":"10.1016/j.ijantimicag.2006.02.009","title":"Antibiotic resistance in Escherichia coli outpatient urinary isolates: final results from the North American Urinary Tract Infection Collaborative Alliance (NAUTICA)","year":2006,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":301,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; Mount Sinai Hospital; University of Manitoba","funders":"","keywords":"Nitrofurantoin; Ciprofloxacin; Medicine; Levofloxacin; Ampicillin; Broth microdilution; Antibiotic resistance; Urinary system; Antibiotics; Microbiology; Internal medicine; Veterinary medicine; Biology; Minimum inhibitory concentration","authors":[{"name":"George G. Zhanel","is_ca":true},{"name":"Tamiko Hisanaga","is_ca":true},{"name":"Nancy M. Laing","is_ca":true},{"name":"Melanie DeCorby","is_ca":true},{"name":"Kimberly A. Nichol","is_ca":true},{"name":"Barb Weshnoweski","is_ca":true},{"name":"Jack Johnson","is_ca":false},{"name":"Ayman Noreddin","is_ca":false},{"name":"Donald E. Low","is_ca":true},{"name":"James A. Karlowsky","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01883101066943214,"gpt":0.2790233502149474,"spread":0.2601923395455152,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003116941,0.0005007877,0.0006827214,0.001492344,0.0008474567,0.0006951845,0.0005670178,0.0008850937,0.0007209163],"category_scores_gemma":[0.005540887,0.0003729369,0.0006123629,0.001582597,0.0002867239,0.0005379076,0.0008814138,0.0004664628,0.000345321],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008394236,"about_ca_system_score_gemma":0.001166196,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02115294,"about_ca_topic_score_gemma":0.03165671,"domain_scores_codex":[0.9968383,0.001016189,0.0004134018,0.0003461478,0.001095827,0.000290059],"domain_scores_gemma":[0.9930568,0.001009554,0.0009317109,0.0004083855,0.003807013,0.0007865714],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000748425,0.0006803841,0.985908,0.0000604501,0.00008692875,0.0002584445,0.0005697938,0.0001124795,0.001786722,0.0000130679,0.0009274266,0.008847883],"study_design_scores_gemma":[0.00009137169,0.000701899,0.9958379,0.00001685461,0.00009256178,0.0004039725,0.0006117053,0.000211308,0.001131102,0.00000824008,0.0008838373,0.000009229138],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955767,0.0002943361,0.0002195877,0.0001090948,0.00001556226,0.0001457754,0.002220229,0.00001673695,0.001401831],"genre_scores_gemma":[0.9932586,0.0003168597,0.0008695876,0.0001512415,0.00002488008,0.0001350964,0.004673281,0.00001435651,0.0005559857],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02115294,"threshold_uncertainty_score":0.04205966,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1966765690","doi":"10.1016/j.ijantimicag.2005.08.003","title":"Antibiotic resistance in outpatient urinary isolates: final results from the North American Urinary Tract Infection Collaborative Alliance (NAUTICA)","year":2005,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":235,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"","keywords":"Staphylococcus saprophyticus; Nitrofurantoin; Microbiology; Medicine; Broth microdilution; Proteus mirabilis; Antibiotic resistance; Enterococcus; Ampicillin; Ciprofloxacin; Morganella morganii; Klebsiella pneumoniae; Staphylococcus aureus; Antibiotics; Biology; Staphylococcus; Escherichia coli; Minimum inhibitory concentration; Bacteria","authors":[{"name":"George G. Zhanel","is_ca":true},{"name":"Tamiko Hisanaga","is_ca":true},{"name":"Nancy M. Laing","is_ca":true},{"name":"Melanie DeCorby","is_ca":true},{"name":"Kim Nichol","is_ca":true},{"name":"Lorraine P. Palatnick","is_ca":true},{"name":"Jack Johnson","is_ca":false},{"name":"Ayman Noreddin","is_ca":true},{"name":"G. K. M. Harding","is_ca":true},{"name":"Lindsay E. Nicolle","is_ca":true},{"name":"the NAUTICA Group","is_ca":false},{"name":"Daryl J. Hoban","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02346209003046135,"gpt":0.2960470579661858,"spread":0.2725849679357245,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003427978,0.0005032619,0.0007934077,0.001657233,0.000868,0.0007476074,0.0006326872,0.0008804842,0.0008369703],"category_scores_gemma":[0.006557319,0.000389482,0.0007453841,0.001675968,0.000269304,0.0006062331,0.00094132,0.0005028431,0.0003501649],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008973009,"about_ca_system_score_gemma":0.001279462,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02153332,"about_ca_topic_score_gemma":0.02842362,"domain_scores_codex":[0.9966996,0.001032908,0.0004533853,0.0003467085,0.001163554,0.0003037749],"domain_scores_gemma":[0.9920334,0.001071271,0.001071944,0.0005119691,0.00446574,0.0008456942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008932211,0.0006933513,0.9815212,0.00008043782,0.0001027257,0.0003238737,0.0007620943,0.0001328698,0.002272592,0.00001926348,0.001343246,0.01185512],"study_design_scores_gemma":[0.0001132714,0.0007583913,0.9948301,0.00002528017,0.0001179726,0.0004969366,0.0006741863,0.0002707198,0.001458447,0.00001226761,0.001230757,0.00001166399],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934508,0.0004391694,0.0003677631,0.0001629583,0.00002298822,0.0002358751,0.003221889,0.000025693,0.002072859],"genre_scores_gemma":[0.990864,0.0003993002,0.001429129,0.0001905412,0.00003367774,0.0002162987,0.00614931,0.00002256411,0.0006951557],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02153332,"threshold_uncertainty_score":0.04281592,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2521967188","doi":"10.1016/j.ijantimicag.2016.08.006","title":"Antimicrobial growth promoter use in livestock: a requirement to understand their modes of action to develop effective alternatives","year":2016,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":231,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Canada; University of Alberta; Agriculture and Agri-Food Canada","funders":"","keywords":"Livestock; Biotechnology; Antimicrobial; Agriculture; Antibiotic resistance; Biology; Function (biology); Population; Business; Production (economics); Environmental health; Economics; Medicine; Microbiology; Ecology; Antibiotics","authors":[{"name":"Kirsty Brown","is_ca":true},{"name":"Richard R. E. Uwiera","is_ca":true},{"name":"Martin Kalmokoff","is_ca":true},{"name":"Steve Brooks","is_ca":true},{"name":"G. Douglas Inglis","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0798566651441021,"gpt":0.3769635775059761,"spread":0.297106912361874,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000546539,0.0006397789,0.001079499,0.000832562,0.0001445293,0.000935561,0.0005427162,0.0008898973,0.001632543],"category_scores_gemma":[0.0006573519,0.000172824,0.0003830974,0.0006681421,0.0003487231,0.001001728,0.0004037828,0.001550344,0.0007233205],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002862299,"about_ca_system_score_gemma":0.0007105664,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003852772,"about_ca_topic_score_gemma":0.0008350771,"domain_scores_codex":[0.999795,0.0000339047,0.00002763845,0.0000351678,0.00008413802,0.00002417741],"domain_scores_gemma":[0.9995682,0.0002002818,0.00009045316,0.00001317636,0.0001019366,0.00002602292],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000164342,0.0001245084,0.0004456117,0.01315953,0.00008428982,0.000238783,0.00004467446,0.0003385855,0.02377769,0.002890756,0.00580928,0.9529218],"study_design_scores_gemma":[0.000032841,0.0005881406,0.00170216,0.004259851,0.000278556,0.002044837,0.0001774251,0.0002671655,0.01854037,0.00217343,0.969898,0.00003716348],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0009466406,0.9968224,0.0006125526,0.0003360759,0.0001900277,0.000005941847,0.00002722105,0.000009296221,0.001049884],"genre_scores_gemma":[0.004382738,0.9931029,0.001211176,0.0002332137,0.0001453506,0.00001347739,0.00003699099,0.000002941389,0.0008711242],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.001632543,"threshold_uncertainty_score":0.005461395,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2021513916","doi":"10.1016/s0924-8579(01)00303-x","title":"Urinary tract infection in adults: research priorities and strategies","year":2001,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":186,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Urinary system; Intensive care medicine; Medicine; Clinical research; Internal medicine","authors":[{"name":"Allan Ronald","is_ca":true},{"name":"Lindsay E. Nicolle","is_ca":true},{"name":"Elisabeth Stamm","is_ca":false},{"name":"John N. Krieger","is_ca":false},{"name":"Jonathan R. Warren","is_ca":false},{"name":"Anthony J. Schaeffer","is_ca":false},{"name":"Kurt G. Naber","is_ca":false},{"name":"Thomas M. Hooton","is_ca":false},{"name":"James R. Johnson","is_ca":false},{"name":"Stephen T. Chambers","is_ca":false},{"name":"Vincent T. Andriole","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04816586008861378,"gpt":0.3796664350099945,"spread":0.3315005749213807,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.03580814,0.001818102,0.005315414,0.005728758,0.003467708,0.008145358,0.002936233,0.01084483,0.009677004],"category_scores_gemma":[0.05915951,0.001073444,0.002230557,0.004758109,0.001760572,0.009488625,0.003565383,0.003698004,0.001248909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005641403,"about_ca_system_score_gemma":0.05296611,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02545151,"about_ca_topic_score_gemma":0.0436921,"domain_scores_codex":[0.9849815,0.008243865,0.003105063,0.0007265004,0.001498844,0.00144417],"domain_scores_gemma":[0.9188508,0.04197832,0.004891268,0.001057784,0.02284504,0.01037667],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003074466,0.004316445,0.1363995,0.04312982,0.001160648,0.001948055,0.003111896,0.001749345,0.001033709,0.01639638,0.122903,0.6647767],"study_design_scores_gemma":[0.004792896,0.008153131,0.1750885,0.1971692,0.009139392,0.005187314,0.1025156,0.012753,0.002466226,0.08069302,0.4011301,0.0009117582],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"commentary","genre_scores_codex":[0.01761873,0.5722221,0.003956728,0.3870564,0.006342694,0.001062112,0.00115244,0.0001251741,0.0104637],"genre_scores_gemma":[0.2205897,0.6448364,0.02652088,0.07383408,0.02520267,0.003666651,0.002041106,0.00003628367,0.003272241],"genre_candidate":"commentary","genre_consensus":null,"teacher_disagreement_score":0.03580814,"threshold_uncertainty_score":0.1893737,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2147240880","doi":"10.1016/j.ijantimicag.2011.05.013","title":"Increased mortality associated with meticillin-resistant Staphylococcus aureus (MRSA) infection in the Intensive Care Unit: results from the EPIC II study","year":2011,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":174,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Intensive care unit; Internal medicine; Staphylococcus aureus; Odds ratio; Staphylococcal infections; Meticillin; Mortality rate; Methicillin-resistant Staphylococcus aureus; Intensive care medicine; Biology","authors":[{"name":"Håkan Hanberger","is_ca":false},{"name":"Sten Walther","is_ca":false},{"name":"Marc Léone","is_ca":false},{"name":"Philip S. Barie","is_ca":false},{"name":"Jordi Rello","is_ca":false},{"name":"Jeffrey Lipman","is_ca":false},{"name":"John C. Marshall","is_ca":true},{"name":"Antonio Anzueto","is_ca":false},{"name":"Yasser Sakr","is_ca":false},{"name":"Peter Pickkers","is_ca":false},{"name":"Peter Felleiter","is_ca":false},{"name":"Milo Engoren","is_ca":false},{"name":"Jean‐Louis Vincent","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06158472002062658,"gpt":0.318144446641195,"spread":0.2565597266205684,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007583534,0.0006848093,0.0005637146,0.0005805898,0.0003647778,0.0007384014,0.0004044817,0.0006824967,0.001036511],"category_scores_gemma":[0.001327693,0.0004494922,0.0009273801,0.0008016381,0.0002622473,0.0004754039,0.000700858,0.000752294,0.0001732403],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002315241,"about_ca_system_score_gemma":0.0002337655,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002597397,"about_ca_topic_score_gemma":0.003038036,"domain_scores_codex":[0.9993696,0.0002898466,0.00005079697,0.0001270588,0.00006295049,0.00009984338],"domain_scores_gemma":[0.9988673,0.0002003365,0.0004077964,0.0001332175,0.00009015857,0.0003012744],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001701006,0.0001245086,0.9964228,0.00001792611,0.0003013568,0.00009764002,0.00007033606,0.00003501187,0.0004043891,0.00001083432,0.00009513772,0.0007189678],"study_design_scores_gemma":[0.00004379211,0.0002825486,0.9992446,0.00000410585,0.0001074418,0.00007446908,0.00009231722,0.00004896753,0.00003808245,0.000006533357,0.00005366764,0.000003492175],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993242,0.0001505608,0.00004331885,0.00001776331,0.000004716366,0.000005689024,0.0002490755,0.000001340167,0.0002033601],"genre_scores_gemma":[0.9992042,0.0001246723,0.00005125384,0.00003771336,0.00002114943,0.00001190437,0.0004107222,0.00000210703,0.0001362717],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002597397,"threshold_uncertainty_score":0.005164564,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2001380876","doi":"10.1016/j.ijantimicag.2010.10.020","title":"Antibacterial activity of some natural products against bacteria expressing a multidrug-resistant phenotype","year":2010,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":164,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Agence Universitaire de la Francophonie","keywords":"Bacteria; Microbiology; Antibacterial activity; Multiple drug resistance; Phenotype; Antibacterial agent; Biology; Antibiotics; Genetics; Gene","authors":[{"name":"Victor Kuete","is_ca":false},{"name":"Sandrine Alibert","is_ca":false},{"name":"Kenneth O. Eyong","is_ca":false},{"name":"Bathélémy Ngameni","is_ca":false},{"name":"Gabriel N. Folefoc","is_ca":false},{"name":"Jean Robert Nguemeving","is_ca":false},{"name":"Jean Gustave Tangmouo","is_ca":false},{"name":"Ghislain W. Fotso","is_ca":false},{"name":"Justin Komguem","is_ca":false},{"name":"Blandine Marlyse Wache Ouahouo","is_ca":false},{"name":"Jean‐Michel Bolla","is_ca":false},{"name":"Jacqueline Chevalier","is_ca":false},{"name":"Bonaventure T. Ngadjui","is_ca":false},{"name":"Augustin Ephrem Nkengfack","is_ca":false},{"name":"Jean‐Marie Pagès","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01419040514925474,"gpt":0.2691763388740813,"spread":0.2549859337248265,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001703987,0.0002607862,0.0001774991,0.0003444671,0.0001618164,0.0001521244,0.0001562674,0.0002207696,0.00128199],"category_scores_gemma":[0.0002572133,0.0001151763,0.000240384,0.0001860495,0.0002545158,0.0001727822,0.0001383598,0.0002948778,0.000132235],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008848685,"about_ca_system_score_gemma":0.0001377362,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002824056,"about_ca_topic_score_gemma":0.0003774344,"domain_scores_codex":[0.9999264,0.00002327963,0.000007251514,0.000007827189,0.00001378306,0.00002136475],"domain_scores_gemma":[0.9998435,0.0000671947,0.00002231899,0.00001291572,0.00002026578,0.00003387318],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009815848,0.00009559593,0.0003252222,0.0001311813,0.00001227178,0.0002124244,0.0000389745,0.0002519295,0.992381,0.0001455252,0.00007280146,0.005351408],"study_design_scores_gemma":[0.00008024056,0.003395076,0.003039967,0.00001972245,0.00003807838,0.0004678967,0.00004035053,0.0003771717,0.9906499,0.00007533404,0.001807308,0.000009150934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941145,0.003099898,0.0008354895,0.00007150388,0.00002414398,0.00002409161,0.0002242024,0.0000201075,0.001586106],"genre_scores_gemma":[0.9963403,0.001211018,0.001279078,0.00003485103,0.00001900285,0.00001334822,0.0003014157,0.000007530326,0.0007935683],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00128199,"threshold_uncertainty_score":0.004288614,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2007157288","doi":"10.1016/j.ijantimicag.2013.08.003","title":"Role of probiotics in the prevention and treatment of meticillin-resistant Staphylococcus aureus infections","year":2013,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":164,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université du Québec à Montréal; Espace pour la vie","funders":"","keywords":"Microbiology; Lactobacillus acidophilus; Lactobacillus casei; Staphylococcus aureus; Probiotic; Lactobacillus fermentum; Bifidobacterium bifidum; Biology; Lactobacillus; Propionibacterium acnes; Lactobacillus rhamnosus; Lactobacillus plantarum; Antimicrobial; Bacteria","authors":[{"name":"Hanna Sikorska","is_ca":true},{"name":"Wanda Smoragiewicz","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04403076321982876,"gpt":0.3051172449025366,"spread":0.2610864816827078,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007860077,0.0008088039,0.001972892,0.002168192,0.0001984213,0.0008516975,0.0009782959,0.001023529,0.001614414],"category_scores_gemma":[0.001067922,0.0002163437,0.0006477078,0.001803909,0.0003451721,0.0006490842,0.0006227737,0.001542577,0.0005903373],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002637086,"about_ca_system_score_gemma":0.0008226128,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001241748,"about_ca_topic_score_gemma":0.002059678,"domain_scores_codex":[0.999665,0.00005666974,0.0000666238,0.00003895408,0.0001442113,0.00002857578],"domain_scores_gemma":[0.9994236,0.0002610646,0.0001228169,0.00001088777,0.0001399327,0.00004156834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001941685,0.0001536312,0.0003200351,0.02367921,0.0002181928,0.0002500199,0.00004911105,0.0002257237,0.001958274,0.0008575235,0.008325329,0.9637688],"study_design_scores_gemma":[0.0002095971,0.001008437,0.005497493,0.0189361,0.001346482,0.004362864,0.0002371549,0.0004096232,0.002313555,0.001574087,0.9640359,0.00006854498],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001317094,0.9995529,0.00004693332,0.00006651031,0.00005898396,0.000002303341,0.000006906141,0.000001838292,0.0001318508],"genre_scores_gemma":[0.0008655993,0.9987256,0.000152052,0.00005763011,0.00008165612,0.00000286548,0.00001365841,4.719606e-7,0.0001005086],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002168192,"threshold_uncertainty_score":0.005400777,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2755393567","doi":"10.1016/j.ijantimicag.2017.09.004","title":"The value of anticoccidials for sustainable global poultry production","year":2017,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Coccidia and coccidiosis research","field":"Agricultural and Biological Sciences","cited_by":160,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Elanco Animal Health","keywords":"Coccidiosis; Sustainability; Production (economics); Business; Poultry farming; Biosecurity; Biotechnology; Animal health; Veterinary medicine; Environmental health; Biology; Medicine; Economics; Ecology","authors":[{"name":"Stefanie Kadykalo","is_ca":false},{"name":"Tara Roberts","is_ca":false},{"name":"Michelle Thompson","is_ca":false},{"name":"Jeff Wilson","is_ca":true},{"name":"Marcelo Lang","is_ca":false},{"name":"Olivier Espeisse","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09197197470538591,"gpt":0.4035602108257955,"spread":0.3115882361204096,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005152416,0.0005261079,0.0006056735,0.001261652,0.0002037836,0.001124764,0.000444833,0.0007668199,0.002540021],"category_scores_gemma":[0.0009580239,0.0001402034,0.0004592186,0.001064298,0.0003153106,0.001035034,0.0003953903,0.0007488218,0.0005976429],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005903784,"about_ca_system_score_gemma":0.0015555,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00179422,"about_ca_topic_score_gemma":0.003227983,"domain_scores_codex":[0.9994788,0.0001125489,0.00008182548,0.00006177442,0.0002280164,0.0000370144],"domain_scores_gemma":[0.9994432,0.0002194513,0.0001466017,0.00001211535,0.0001548746,0.0000237717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001290636,0.00006120175,0.0006800961,0.06657524,0.0002235557,0.0003836663,0.0002061765,0.0006796004,0.01516637,0.007092149,0.0136777,0.8951252],"study_design_scores_gemma":[0.00001492172,0.0002144313,0.003107045,0.01730625,0.0003791138,0.000766281,0.0002165309,0.0001604097,0.004530889,0.002330836,0.9709458,0.00002739911],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001401652,0.9946619,0.0003175392,0.0006564711,0.0001842845,0.000007861404,0.00005443813,0.000009153614,0.002706745],"genre_scores_gemma":[0.01243904,0.9853463,0.0007783779,0.0004523002,0.0001293835,0.00001137029,0.00006459433,0.000003568474,0.0007750385],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002540021,"threshold_uncertainty_score":0.008497238,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2345854975","doi":"10.1016/j.ijantimicag.2016.04.008","title":"Resistance to colistin: what is the fate for this antibiotic in pig production?","year":2016,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":155,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"","keywords":"Colistin; Antibiotics; Enterobacteriaceae; Medicine; Drug resistance; Antibiotic resistance; Polymyxin; Biology; Microbiology; Escherichia coli; Gene; Genetics","authors":[{"name":"Mohamed Rhouma","is_ca":true},{"name":"Francis Beaudry","is_ca":true},{"name":"Ann Letellier","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02891059772910843,"gpt":0.3417069199425763,"spread":0.3127963222134679,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009993112,0.0006182519,0.001334587,0.001080217,0.0001508718,0.001145007,0.0007929455,0.001675104,0.002031738],"category_scores_gemma":[0.001261159,0.0002069708,0.0004183845,0.001148143,0.000622471,0.001140892,0.0004445713,0.001667752,0.0009896278],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005711855,"about_ca_system_score_gemma":0.001297668,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001218466,"about_ca_topic_score_gemma":0.001893585,"domain_scores_codex":[0.9997278,0.00005176719,0.00003960594,0.00005406958,0.00009608539,0.0000307403],"domain_scores_gemma":[0.999207,0.0003313672,0.0001670862,0.00002111482,0.0002076705,0.00006588311],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001159837,0.00005133191,0.0004853169,0.009385948,0.00006909677,0.0001703935,0.00004424104,0.0002346931,0.002639835,0.002162751,0.01408512,0.9705554],"study_design_scores_gemma":[0.00003257241,0.000348585,0.002687363,0.005876289,0.0002302109,0.002076586,0.0001767156,0.0002511707,0.001699078,0.002208055,0.984374,0.00003935372],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002410424,0.9980726,0.0001284175,0.0008757168,0.0001939399,0.000001736887,0.0000132718,0.00000453974,0.0004686909],"genre_scores_gemma":[0.001329419,0.9976549,0.0001637881,0.0003321161,0.0001660265,0.000002548633,0.00001432512,0.000001150061,0.0003357052],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002031738,"threshold_uncertainty_score":0.006796837,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2900807296","doi":"10.1016/j.ijantimicag.2018.11.007","title":"In Vitro Activity of Cefiderocol, a Siderophore Cephalosporin, Against Gram-Negative Bacilli Isolated by Clinical Laboratories in North America and Europe in 2015-2016: SIDERO-WT-2015","year":2018,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":155,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"Shionogi","keywords":"Stenotrophomonas maltophilia; Acinetobacter; Cephalosporin; Microbiology; Bacilli; Pseudomonas aeruginosa; Broth microdilution; Siderophore; Acinetobacter baumannii; Burkholderia; Biology; Enterobacteriaceae; Stenotrophomonas; Pseudomonas; Minimum inhibitory concentration; Bacteria; Antibiotics; Escherichia coli","authors":[{"name":"James A. Karlowsky","is_ca":true},{"name":"Meredith Hackel","is_ca":false},{"name":"Masakatsu Tsuji","is_ca":false},{"name":"Yoshinori Yamano","is_ca":false},{"name":"Roger Echols","is_ca":false},{"name":"Daniel F. Sahm","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01049594400859941,"gpt":0.3022691831790458,"spread":0.2917732391704464,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006789555,0.0005980976,0.0004470827,0.0003373242,0.0001192323,0.0004128739,0.0002820618,0.0004221723,0.001356622],"category_scores_gemma":[0.0006292561,0.0002015546,0.0004664302,0.000450553,0.0001624096,0.0002663211,0.000400241,0.000364958,0.0004516039],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002566458,"about_ca_system_score_gemma":0.0005089598,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003918665,"about_ca_topic_score_gemma":0.005975658,"domain_scores_codex":[0.9990014,0.0002397245,0.0002180721,0.0001864757,0.0002523531,0.0001020027],"domain_scores_gemma":[0.9994282,0.0001402811,0.0001249235,0.00004729986,0.0001945524,0.00006460822],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002665534,0.00102955,0.023678,0.0005363127,0.0001904645,0.0001474264,0.0001656,0.0009688445,0.9479131,0.00007425743,0.001071698,0.02155916],"study_design_scores_gemma":[0.0002478272,0.01999171,0.09644984,0.0001013921,0.0001981295,0.0007788803,0.0001595617,0.001697617,0.873353,0.00003419039,0.006948183,0.00003967202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923273,0.002789346,0.0003881133,0.0001015369,0.00005915834,0.00006216353,0.002180067,0.00002051315,0.002071809],"genre_scores_gemma":[0.9858949,0.002029548,0.001831815,0.0001172865,0.00003504099,0.00004983099,0.006440307,0.00001157014,0.003589801],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003918665,"threshold_uncertainty_score":0.007791758,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2118933385","doi":"10.1016/j.ijantimicag.2007.06.019","title":"The changing face of Klebsiella pneumoniae infections in the community","year":2007,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":148,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"","keywords":"Klebsiella pneumoniae; Antibiotics; Antibiotic resistance; Antimicrobial; Meningitis; Intensive care medicine; Drug resistance; Medicine; Empiric therapy; Serotype; Microbiology; Biology; Pediatrics","authors":[{"name":"Yoav Keynan","is_ca":true},{"name":"Ethan Rubinstein","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0428115203267447,"gpt":0.3626370436157337,"spread":0.3198255232889891,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014018,0.0009262763,0.002327447,0.00176212,0.0004270082,0.0019875,0.001657636,0.003888802,0.002330901],"category_scores_gemma":[0.002521874,0.0003358073,0.0004937398,0.002450967,0.001079789,0.002714454,0.0009023658,0.002704941,0.0014449],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008895035,"about_ca_system_score_gemma":0.001952132,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00192024,"about_ca_topic_score_gemma":0.00400616,"domain_scores_codex":[0.9994124,0.0001235838,0.00007951263,0.00008297106,0.0002494189,0.00005204466],"domain_scores_gemma":[0.9981956,0.0008512822,0.0002359131,0.00003262054,0.0004811412,0.0002035049],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009105342,0.00006607929,0.0006242843,0.009539688,0.00005722385,0.0006597668,0.00008189648,0.0001886291,0.0006006748,0.001855669,0.04359859,0.9426364],"study_design_scores_gemma":[0.00004245207,0.000189598,0.003408238,0.006007704,0.0001516962,0.007643611,0.000334977,0.0001490581,0.0003241888,0.002310927,0.9793929,0.00004462179],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000115082,0.9977341,0.0001015881,0.001231808,0.0004361136,0.000001775448,0.000007312226,0.000005431871,0.0003668542],"genre_scores_gemma":[0.0005147522,0.9981541,0.0001517996,0.0004137568,0.000589541,0.000002550813,0.00001002925,8.27392e-7,0.0001627074],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.003888802,"threshold_uncertainty_score":0.007797658,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2063044773","doi":"10.1016/s0924-8579(00)00356-3","title":"Urinary tract infections in adults with diabetes","year":2001,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":147,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Medicine; Diabetes mellitus; Urinary system; Bacteremia; Bacteriuria; Asymptomatic; Asymptomatic bacteriuria; Intensive care medicine; Disease; Internal medicine; Surgery; Antibiotics; Endocrinology","authors":[{"name":"Allan Ronald","is_ca":true},{"name":"Endre Ludwig","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02810260144568211,"gpt":0.3292735816451338,"spread":0.3011709801994517,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005657545,0.0008151555,0.001920204,0.002317965,0.0002467753,0.0007932928,0.0005163198,0.0007640884,0.001490389],"category_scores_gemma":[0.001680156,0.0002631425,0.000647125,0.002852879,0.000238566,0.001038169,0.0005064819,0.0008586519,0.0004398901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000358036,"about_ca_system_score_gemma":0.001140842,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001906577,"about_ca_topic_score_gemma":0.005294369,"domain_scores_codex":[0.9995815,0.00007758148,0.0001169273,0.00005656361,0.0001376577,0.00002980565],"domain_scores_gemma":[0.9991222,0.000357386,0.0003069601,0.00001516382,0.0001385742,0.00005983626],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001024526,0.00009047255,0.003277329,0.02122139,0.000185889,0.0006446162,0.00006284734,0.0001238995,0.0004807053,0.0002076637,0.01306453,0.9605383],"study_design_scores_gemma":[0.0002085864,0.0009830864,0.05588727,0.05867565,0.002811772,0.02840572,0.0005304675,0.0004043747,0.001068192,0.0008242099,0.8501122,0.00008849787],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0003963484,0.998647,0.00007707133,0.0001968868,0.0001611979,0.000005377791,0.00001703195,0.000004754106,0.0004943328],"genre_scores_gemma":[0.002020433,0.9970642,0.0002066544,0.0002397381,0.0002193646,0.000006126092,0.00002315235,7.201437e-7,0.0002196037],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002317965,"threshold_uncertainty_score":0.004985809,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2051657533","doi":"10.1016/j.ijantimicag.2004.05.005","title":"Cyclic dipeptides exhibit synergistic, broad spectrum antimicrobial effects and have anti-mutagenic properties","year":2004,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":136,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Korea Research Institute of Bioscience and Biotechnology","keywords":"Enterococcus faecalis; Salmonella; Microbiology; Candida albicans; Micrococcus luteus; Staphylococcus aureus; Enterococcus faecium; Antimicrobial; Chemistry; Cryptococcus neoformans; Escherichia coli; Antibiotics; Biology; Bacteria; Biochemistry","authors":[{"name":"Ki‐Hyeong Rhee","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01414644089641452,"gpt":0.2669679524938019,"spread":0.2528215115973874,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001314552,0.0003414381,0.0002752773,0.0002934923,0.0001017379,0.0001478349,0.0001467128,0.0003521637,0.002407797],"category_scores_gemma":[0.0002105853,0.0001051033,0.0002633164,0.0002026217,0.0001449771,0.0001392106,0.000173545,0.0003422256,0.0004077391],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008342433,"about_ca_system_score_gemma":0.0000862458,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000147808,"about_ca_topic_score_gemma":0.000375968,"domain_scores_codex":[0.9998991,0.00002671436,0.00000660946,0.00001228951,0.00003039607,0.000024897],"domain_scores_gemma":[0.9997861,0.00006217814,0.00004678329,0.00001675926,0.0000310686,0.00005705927],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004056758,0.00006663054,0.000226133,0.0001343605,0.0000195342,0.000148334,0.000009158131,0.0001177805,0.9864042,0.000088845,0.0001178407,0.01226153],"study_design_scores_gemma":[0.0000497582,0.003238142,0.004751091,0.00001709382,0.00005748152,0.001405564,0.00002963213,0.0002494779,0.9843816,0.00009351346,0.00571648,0.00001026789],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9599028,0.02519014,0.003418065,0.0002263779,0.0001773941,0.00009337072,0.0005044335,0.00007499615,0.01041235],"genre_scores_gemma":[0.9894173,0.003945157,0.003074146,0.0001646386,0.00006291433,0.00003236276,0.0003261222,0.00001178249,0.002965679],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002407797,"threshold_uncertainty_score":0.008054852,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1975795847","doi":"10.1016/j.ijantimicag.2012.09.015","title":"Activity of LL-37, CRAMP and antimicrobial peptide-derived compounds E2, E6 and CP26 against Mycobacterium tuberculosis","year":2012,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Antimicrobial; Mycobacterium tuberculosis; Microbiology; Antimicrobial peptides; Tuberculosis; Peptide; In vivo; Bacilli; Minimum inhibitory concentration; In vitro; Antibiotics; Biology; Chemistry; Bacteria; Medicine; Biochemistry; Pathology; Biotechnology","authors":[{"name":"Bruno Rivas‐Santiago","is_ca":false},{"name":"César Rivas-Santiago","is_ca":false},{"name":"Julio Enrique Castañeda‐Delgado","is_ca":false},{"name":"Juan Carlos León‐Contreras","is_ca":false},{"name":"Robert E. W. Hancock","is_ca":true},{"name":"Rogélio Hernández‐Pando","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01474588414958664,"gpt":0.2503391012595031,"spread":0.2355932171099165,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000177347,0.0003276655,0.0002284418,0.0002320587,0.0001184614,0.0001702596,0.0002229263,0.0002805879,0.001794268],"category_scores_gemma":[0.0002785133,0.00009847693,0.0001946908,0.0001583231,0.0002119918,0.0001641034,0.0001612451,0.0003615714,0.0002875408],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000105624,"about_ca_system_score_gemma":0.000220972,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005281098,"about_ca_topic_score_gemma":0.0004094609,"domain_scores_codex":[0.9998981,0.00002448379,0.00001072437,0.00001033721,0.00002294096,0.00003343494],"domain_scores_gemma":[0.9998676,0.00003948486,0.00001923122,0.00001258254,0.00001541728,0.00004579517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002370159,0.0001910674,0.0003071926,0.0001889431,0.00001234815,0.0001557645,0.00002419985,0.0004877894,0.9911964,0.00006558133,0.00009463185,0.0049059],"study_design_scores_gemma":[0.00017854,0.006647468,0.004757991,0.00002607899,0.00003339514,0.0003669866,0.00002867874,0.0005554223,0.9846806,0.00004674692,0.002666031,0.00001216298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946828,0.003415432,0.0002649016,0.00003928143,0.00002093492,0.00002514414,0.0003378087,0.00001750056,0.001196034],"genre_scores_gemma":[0.995713,0.001463378,0.0006110933,0.00003599282,0.00002122718,0.00001805025,0.0006474486,0.000004443099,0.00148535],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001794268,"threshold_uncertainty_score":0.006002486,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2147267520","doi":"10.1016/j.ijantimicag.2006.05.010","title":"Asymptomatic bacteriuria: review and discussion of the IDSA guidelines","year":2006,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":129,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; Manitoba Health; University of Manitoba","funders":"","keywords":"Medicine; Asymptomatic; Bacteriuria; Intensive care medicine; Population; Antimicrobial; Internal medicine; Surgery; Urinary system","authors":[{"name":"Lindsay E. Nicolle","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05526854346628428,"gpt":0.3909057882645763,"spread":0.335637244798292,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003587855,0.001219299,0.00444254,0.007541218,0.0005512055,0.001821822,0.002722691,0.002470658,0.002520019],"category_scores_gemma":[0.00697072,0.0006772265,0.001598498,0.007691654,0.0008914146,0.002177986,0.001092405,0.002482832,0.001192729],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001813759,"about_ca_system_score_gemma":0.00534074,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003806215,"about_ca_topic_score_gemma":0.009358441,"domain_scores_codex":[0.9978623,0.0003539517,0.000858869,0.000215973,0.0006310123,0.00007790792],"domain_scores_gemma":[0.9930122,0.003507635,0.00150799,0.0001005233,0.001586152,0.0002855077],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001669147,0.0001203092,0.0009461286,0.06297923,0.0002729167,0.0007930151,0.0001289899,0.0003011443,0.0004869256,0.001764896,0.1050408,0.8269988],"study_design_scores_gemma":[0.0001002323,0.000178357,0.005682235,0.07275668,0.001208732,0.007328174,0.0002290021,0.0002424413,0.0003992617,0.001535903,0.9102579,0.00008126105],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00007900116,0.9978297,0.0001085504,0.001126555,0.000411741,0.00001041518,0.00004634448,0.000006453882,0.0003811633],"genre_scores_gemma":[0.0005744389,0.9973884,0.0005372589,0.0008178317,0.0004275241,0.00001710866,0.00006696601,0.000002338088,0.0001680774],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.007541218,"threshold_uncertainty_score":0.0189746,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2093616318","doi":"10.1016/j.ijantimicag.2008.06.027","title":"Distribution of the multidrug efflux pump genes, adeABC, adeDE and adeIJK, and class 1 integron genes in multiple-antimicrobial-resistant clinical isolates of Acinetobacter baumannii–Acinetobacter calcoaceticus complex","year":2008,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Canada","funders":"","keywords":"Acinetobacter baumannii; Microbiology; Biology; Integron; Multiple drug resistance; Neisseriaceae; Efflux; Antibiotic resistance; Acinetobacter; Drug resistance; Genetics; Antibiotics; Bacteria; Pseudomonas aeruginosa","authors":[{"name":"Lin Li","is_ca":false},{"name":"Baodong Ling","is_ca":false},{"name":"Xian-Zhi Li","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03125581752916604,"gpt":0.2886445470402602,"spread":0.2573887295110941,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001364077,0.0002246034,0.0002505592,0.0008839896,0.0002370182,0.0005102091,0.0001769574,0.0004272716,0.001161103],"category_scores_gemma":[0.0009319538,0.000228959,0.0001702575,0.0005379992,0.0003458124,0.0002157531,0.0002150136,0.0003544764,0.0001852692],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002508799,"about_ca_system_score_gemma":0.0001868125,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002462339,"about_ca_topic_score_gemma":0.001587431,"domain_scores_codex":[0.9996569,0.0000374569,0.00003937664,0.000112923,0.00006849023,0.00008489739],"domain_scores_gemma":[0.9993611,0.000188131,0.0001465511,0.00003926413,0.0001344327,0.0001306514],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001481638,0.0002011003,0.06743832,0.00007654264,0.00004600267,0.001112118,0.000581401,0.000273242,0.92078,0.0002226118,0.0001461031,0.007640933],"study_design_scores_gemma":[0.0001028261,0.001157693,0.8570735,0.00002877294,0.0001342986,0.009275339,0.001482514,0.00200001,0.1264656,0.0003146825,0.001930484,0.00003425301],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991787,0.0001802156,0.0001522196,0.00003266062,0.00000472598,0.000005687159,0.0001754021,0.000003980236,0.000266282],"genre_scores_gemma":[0.999135,0.00008298536,0.0002454794,0.00002578983,0.000007074977,0.000006274105,0.0002210878,0.000003608926,0.0002728199],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002462339,"threshold_uncertainty_score":0.004895985,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2076322521","doi":"10.1016/s0924-8579(99)00131-4","title":"Trends in antimicrobial susceptibility of bacterial pathogens isolated from patients with bloodstream infections in the USA, Canada and Latin America","year":2000,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":126,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"cons; Latin Americans; Antibiotic resistance; Staphylococcus aureus; Antimicrobial; Microbiology; Drug resistance; Medicine; Staphylococcal infections; Bloodstream infection; Antibiotics; Biology; Bacteria","authors":[{"name":"Daniel J. Diekema","is_ca":false},{"name":"Michael A. Pfaller","is_ca":false},{"name":"Ronald N. Jones","is_ca":false},{"name":"Gary V. Doern","is_ca":false},{"name":"Kari C. Kugler","is_ca":false},{"name":"Mondell L. Beach","is_ca":false},{"name":"Hélio S. Sader","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007995208655041835,"gpt":0.2312344074390499,"spread":0.2232391987840081,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003804296,0.0002051774,0.0002827882,0.001935064,0.0008296936,0.0009961439,0.0006806818,0.0004778992,0.001651633],"category_scores_gemma":[0.002474724,0.0001564026,0.0003824171,0.00385958,0.0005270636,0.0004114314,0.0005336519,0.0007060687,0.0001990056],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.007680434,"about_ca_system_score_gemma":0.008299142,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9306839,"about_ca_topic_score_gemma":0.9520393,"domain_scores_codex":[0.9994745,0.00004382458,0.00005119568,0.00005320027,0.0001815534,0.0001956771],"domain_scores_gemma":[0.9969611,0.0002262498,0.0005412554,0.00003354921,0.001781969,0.0004558799],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006298866,0.00001677158,0.9957103,0.00002449846,0.00002902303,0.00005268142,0.0003420742,0.00005620635,0.0002774635,0.00006436725,0.0005654846,0.002798168],"study_design_scores_gemma":[0.000002294135,0.00001772649,0.9974328,0.00002104941,0.00001472967,0.0001103229,0.001473124,0.00009171647,0.00009051015,0.00001035569,0.0007310624,0.000004413509],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9902998,0.001628202,0.0001086606,0.0006245697,0.00001338838,0.00001889841,0.003567213,0.00002021166,0.00371905],"genre_scores_gemma":[0.9957032,0.001372525,0.0001988082,0.0002996886,0.000009170724,0.00001331984,0.001562238,0.00000632709,0.0008347619],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06931615,"threshold_uncertainty_score":0.1394487,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977578039","doi":"10.1016/j.ijantimicag.2012.10.015","title":"Vancomycin pharmacodynamics and survival in patients with methicillin-resistant Staphylococcus aureus-associated septic shock","year":2013,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":116,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Surrey Memorial Hospital; University of British Columbia; University of Manitoba; St. Paul's Hospital; St. Boniface Hospital","funders":"University of Manitoba","keywords":"Medicine; Vancomycin; Septic shock; Pharmacodynamics; Internal medicine; Staphylococcus aureus; Dosing; Univariate analysis; Intensive care unit; Mortality rate; Multivariate analysis; Pharmacokinetics; Sepsis; Biology","authors":[{"name":"Sheryl Zelenitsky","is_ca":true},{"name":"Ethan Rubinstein","is_ca":true},{"name":"Robert E. Ariano","is_ca":true},{"name":"Harris Iacovides","is_ca":true},{"name":"Peter Dodek","is_ca":true},{"name":"Yazdan Mirzanejad","is_ca":true},{"name":"Anand Kumar","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01136138232436138,"gpt":0.2713416902375574,"spread":0.259980307913196,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002503774,0.0002760184,0.0005120878,0.0002348016,0.0002659522,0.000613307,0.0001586662,0.0005108042,0.0008095214],"category_scores_gemma":[0.002275174,0.0001588837,0.000412917,0.0003521068,0.0002354616,0.0005163301,0.0003305263,0.0007613229,0.0001754036],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002235834,"about_ca_system_score_gemma":0.000216915,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005038132,"about_ca_topic_score_gemma":0.0005710617,"domain_scores_codex":[0.9997731,0.00006406985,0.00002866168,0.00003679489,0.00003337164,0.00006412339],"domain_scores_gemma":[0.9987743,0.0003867425,0.0003642553,0.00005679804,0.00008748011,0.0003304186],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.005651393,0.0002437905,0.982704,0.00002970358,0.0002094123,0.0008711203,0.0001403064,0.0005102361,0.002970697,0.00005697464,0.0001677112,0.0064446],"study_design_scores_gemma":[0.00008832756,0.003168834,0.9921528,0.00001909855,0.000136482,0.001599041,0.0003596757,0.001687935,0.0003997383,0.0001666138,0.00020174,0.0000196549],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993733,0.0002494182,0.00005521331,0.00004369736,0.000006220235,0.000001920274,0.00004631164,0.000002654385,0.0002213441],"genre_scores_gemma":[0.9997305,0.00007424923,0.00002215875,0.00003239483,0.000009039311,0.000002267522,0.00007019467,0.000001055139,0.00005806836],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008095214,"threshold_uncertainty_score":0.002708137,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1978168723","doi":"10.1016/j.ijantimicag.2008.06.017","title":"Bloodstream infections in cancer patients with febrile neutropenia","year":2008,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Neutropenia and Cancer Infections","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"","keywords":"Procalcitonin; Medicine; Febrile neutropenia; Bacteremia; Internal medicine; Neutropenia; Antibiotics; Cancer; Gram; Intensive care medicine; Sepsis; Chemotherapy; Microbiology","authors":[{"name":"Ronald Feld","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02965462668974961,"gpt":0.3485333528518147,"spread":0.3188787261620651,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005178664,0.0007732316,0.002061729,0.00224501,0.000198674,0.0007736392,0.0005929249,0.0008352896,0.001642178],"category_scores_gemma":[0.001878161,0.0002594655,0.000708316,0.002458781,0.0002784499,0.0008465375,0.0004924951,0.001157736,0.0004839782],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003886288,"about_ca_system_score_gemma":0.001059867,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001454005,"about_ca_topic_score_gemma":0.003736219,"domain_scores_codex":[0.9996154,0.00007950315,0.0001055181,0.00005019282,0.0001240543,0.00002533923],"domain_scores_gemma":[0.9991583,0.0003634059,0.0002721469,0.00001235915,0.0001446755,0.00004904387],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001326324,0.00006652631,0.001900551,0.01931859,0.0002018576,0.0004281714,0.00005144055,0.0001688185,0.0005416584,0.0003789058,0.01816853,0.9586425],"study_design_scores_gemma":[0.0002276919,0.0008024832,0.03129907,0.05303337,0.002794654,0.02020269,0.0003579496,0.0005202452,0.00125517,0.001430552,0.8879717,0.0001044714],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000217801,0.999064,0.00006086136,0.0001478441,0.0001198438,0.000002931409,0.00001114349,0.000003969984,0.0003715135],"genre_scores_gemma":[0.001935481,0.997211,0.0001876084,0.0002367457,0.0001947785,0.000005956995,0.0000245243,9.042369e-7,0.0002030424],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.00224501,"threshold_uncertainty_score":0.005493581,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1971659703","doi":"10.1016/j.ijantimicag.2004.02.021","title":"Comparison of minimal inhibitory and mutant prevention drug concentrations of 4 fluoroquinolones against clinical isolates of methicillin-susceptible and -resistant Staphylococcus aureus","year":2004,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":108,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal University Hospital; University of Saskatchewan","funders":"Bayer Corporation; Bayer","keywords":"Gatifloxacin; Moxifloxacin; Gemifloxacin; Levofloxacin; Staphylococcus aureus; Microbiology; Minimum inhibitory concentration; Antimicrobial; Medicine; Pharmacology; Potency; Drug resistance; Chemistry; Antibiotics; Biology; Bacteria; In vitro; Biochemistry","authors":[{"name":"K. Metzler","is_ca":true},{"name":"G. Hansen","is_ca":true},{"name":"Peter Hedlin","is_ca":true},{"name":"Elizabeth Harding","is_ca":true},{"name":"Karl Drlica","is_ca":false},{"name":"Joseph M. Blondeau","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04219244216228175,"gpt":0.3722918726211613,"spread":0.3300994304588795,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005503797,0.0005112275,0.0008470269,0.0004678447,0.0002848317,0.000450663,0.000539538,0.000716529,0.001700176],"category_scores_gemma":[0.002768362,0.0003702689,0.0004848079,0.0003411931,0.0003279774,0.0004438878,0.0002164978,0.0005612602,0.000214856],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000301245,"about_ca_system_score_gemma":0.0003562902,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001957965,"about_ca_topic_score_gemma":0.003633545,"domain_scores_codex":[0.9991651,0.0002763335,0.0001152032,0.0001086003,0.0002295905,0.0001051575],"domain_scores_gemma":[0.998306,0.0009035295,0.0001975585,0.00008734666,0.0003252312,0.0001802183],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.04497841,0.001354778,0.01174834,0.0007557516,0.0002097405,0.0003340956,0.0005091615,0.001942781,0.8961971,0.0003116638,0.0007966134,0.04086173],"study_design_scores_gemma":[0.0008411019,0.04725111,0.08355805,0.00009555246,0.0004112618,0.001072671,0.0004689156,0.002803138,0.8581311,0.0001934307,0.005087527,0.00008624892],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944773,0.003407129,0.0004110154,0.0001693963,0.00008206131,0.0000323787,0.0004882882,0.00003204239,0.0009003454],"genre_scores_gemma":[0.9969002,0.0007951028,0.0009906243,0.00004307335,0.00004936613,0.00002131621,0.0004726202,0.000008946603,0.0007188017],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001957965,"threshold_uncertainty_score":0.005687594,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1985581069","doi":"10.1016/j.ijantimicag.2005.10.021","title":"Antibacterial activity of liposomal gentamicin against Pseudomonas aeruginosa: a time–kill study","year":2006,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":108,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Laurentian University","funders":"","keywords":"Gentamicin; Pseudomonas aeruginosa; Microbiology; Antibacterial agent; Antibacterial activity; Aminoglycoside; Antibiotics; Chemistry; Biology; Bacteria","authors":[{"name":"G RUKHOLM","is_ca":true},{"name":"Clement Mugabe","is_ca":true},{"name":"Ali Azghani","is_ca":false},{"name":"Abdelwahab Omri","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01159712862230466,"gpt":0.3022191579376322,"spread":0.2906220293153275,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003635185,0.0003779568,0.0003573808,0.0002591466,0.0001501486,0.0002129627,0.0002875943,0.0004888165,0.001894227],"category_scores_gemma":[0.0004152372,0.0001651604,0.000342892,0.000261424,0.000377297,0.0004671472,0.0002924516,0.0004426061,0.0003346568],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00022675,"about_ca_system_score_gemma":0.0002284564,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001003452,"about_ca_topic_score_gemma":0.0006800379,"domain_scores_codex":[0.9997196,0.00008793026,0.00002339931,0.00003651749,0.00005963218,0.00007307006],"domain_scores_gemma":[0.9997547,0.0001044214,0.00003705648,0.00002959053,0.00004768595,0.00002649002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001721147,0.0001897971,0.0001969439,0.0001112868,0.00001255978,0.00006582241,0.00007586793,0.0002076452,0.9946628,0.00006503689,0.00004561003,0.002645486],"study_design_scores_gemma":[0.0002499005,0.01576583,0.008770562,0.00002945052,0.00009651548,0.0003526077,0.0001664887,0.002139018,0.9704963,0.00007165113,0.001829328,0.00003233934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960765,0.002498501,0.0007492316,0.00004606203,0.00001881059,0.0000370099,0.0001128487,0.00001187087,0.0004492028],"genre_scores_gemma":[0.9967615,0.001298051,0.0005943607,0.00003155885,0.00001462286,0.00002395304,0.0001833045,0.00000847129,0.001084145],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001894227,"threshold_uncertainty_score":0.006336868,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2125955483","doi":"10.1016/j.ijantimicag.2015.04.014","title":"Medical treatment of prosthetic vascular graft infections: Review of the literature and proposals of a Working Group","year":2015,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Infectious Aortic and Vascular Conditions","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hotel Dieu Hospital","funders":"Novartis","keywords":"Medicine; Political science; Library science; Computer science","authors":[{"name":"Matthieu Revest","is_ca":false},{"name":"Fabrice Camou","is_ca":false},{"name":"É. Senneville","is_ca":false},{"name":"J. Caillon","is_ca":true},{"name":"Frédéric Laurent","is_ca":false},{"name":"Brigitte Calvet","is_ca":false},{"name":"Patrick Feugier","is_ca":false},{"name":"Michel Batt","is_ca":false},{"name":"Christian Chidiac","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.038964243735794,"gpt":0.3505600555761039,"spread":0.3115958118403099,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002650612,0.0007841521,0.002315016,0.004540524,0.0003993488,0.001452709,0.001521448,0.001572871,0.00177295],"category_scores_gemma":[0.003754529,0.0003386473,0.00146251,0.003502738,0.0006462615,0.001667457,0.0008939417,0.001493021,0.0003382552],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007918276,"about_ca_system_score_gemma":0.003130933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001357473,"about_ca_topic_score_gemma":0.003081913,"domain_scores_codex":[0.998941,0.0002208003,0.0004036996,0.0001189439,0.0002689201,0.00004666001],"domain_scores_gemma":[0.9969701,0.001816152,0.000592271,0.00004147555,0.0004797171,0.0001004473],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"systematic_review","study_design_scores_codex":[0.00020592,0.000121986,0.0009369118,0.1393874,0.0005605483,0.0004708827,0.0001639458,0.0002538721,0.0009242894,0.002040008,0.01752891,0.8374052],"study_design_scores_gemma":[0.0001916396,0.000563773,0.008710226,0.1802634,0.0043389,0.005689932,0.0007639686,0.0003641112,0.00106907,0.002315402,0.7956164,0.0001130712],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00009304658,0.9992644,0.00003686827,0.0003265169,0.000106601,0.000006618488,0.00001223323,0.000001422799,0.0001522419],"genre_scores_gemma":[0.0006722764,0.998726,0.0001786723,0.0002494754,0.0001135453,0.000006488109,0.00001634055,4.268762e-7,0.00003685466],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.004540524,"threshold_uncertainty_score":0.014018,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2009682500","doi":"10.1016/j.ijantimicag.2012.05.009","title":"Raloxifene attenuates Pseudomonas aeruginosa pyocyanin production and virulence","year":2012,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":100,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"National Institute of General Medical Sciences","keywords":"Pyocyanin; Pseudomonas aeruginosa; Virulence; Raloxifene; Microbiology; Pathogen; Biofilm; Biology; Quorum sensing; Gene; Bacteria; Cancer; Biochemistry; Genetics; Estrogen receptor","authors":[{"name":"Shannan J. Ho Sui","is_ca":true},{"name":"Raymond Lo","is_ca":true},{"name":"Aalton R. Fernandes","is_ca":true},{"name":"Mackenzie D.G. Caulfield","is_ca":true},{"name":"Joshua A. Lerman","is_ca":false},{"name":"Lei Xie","is_ca":false},{"name":"Philip E. Bourne","is_ca":false},{"name":"David L. Baillie","is_ca":true},{"name":"Fiona S. L. Brinkman","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02041883750209232,"gpt":0.280049573837344,"spread":0.2596307363352516,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001661511,0.0003680361,0.0004927121,0.0002362599,0.0001996745,0.0004099923,0.0003266914,0.0003875831,0.002662463],"category_scores_gemma":[0.0003798125,0.0002002209,0.0003803598,0.0001222452,0.0004180119,0.0002523664,0.0002803486,0.0007998919,0.0005170299],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002635774,"about_ca_system_score_gemma":0.0005420857,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001375387,"about_ca_topic_score_gemma":0.001985119,"domain_scores_codex":[0.9997079,0.00006830598,0.0000229557,0.00002275695,0.00007055575,0.0001074235],"domain_scores_gemma":[0.9997742,0.00004482819,0.00004791376,0.00003306502,0.00003004679,0.0000700482],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001934428,0.0002081238,0.0002492156,0.00003960289,0.00001136472,0.00007829416,0.00002481774,0.00004830556,0.9948849,0.00008246846,0.00008704044,0.002351376],"study_design_scores_gemma":[0.0001883969,0.003117108,0.004539649,0.000006493925,0.00003410513,0.000200693,0.0001100569,0.0005406282,0.9886473,0.00004781227,0.002557546,0.00001016265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964345,0.00111829,0.0008707148,0.0002510014,0.00005796473,0.00003032612,0.0001903934,0.0001510913,0.0008956994],"genre_scores_gemma":[0.9939295,0.0006435986,0.0006841148,0.00005772992,0.00002283656,0.00003667532,0.0003173732,0.00001729847,0.004290792],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002662463,"threshold_uncertainty_score":0.008906782,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2160674838","doi":"10.1016/j.ijantimicag.2012.04.020","title":"Antibiotic resistance of mixed biofilms in cystic fibrosis: impact of emerging microorganisms on treatment of infection","year":2012,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Biofilm; Pseudomonas aeruginosa; Cystic fibrosis; Microbiology; Antibiotics; Antimicrobial; Antibiotic resistance; Biology; Colonisation; Bacteria; Colonization; Genetics","authors":[{"name":"Susana Patrícia Lopes","is_ca":false},{"name":"Howard Ceri","is_ca":true},{"name":"Nuno F. Azevedo","is_ca":false},{"name":"Maria Olívia Pereira","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01187693074670798,"gpt":0.2828873962907937,"spread":0.2710104655440857,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009399649,0.0001844934,0.0004609946,0.0004185494,0.0002816721,0.0008805735,0.0002587699,0.0006942053,0.000910475],"category_scores_gemma":[0.002372565,0.0001000264,0.0002223313,0.00028531,0.0002464015,0.0005690294,0.0003283575,0.0005028872,0.00008830494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003438219,"about_ca_system_score_gemma":0.0004785857,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001231669,"about_ca_topic_score_gemma":0.001498408,"domain_scores_codex":[0.9995527,0.0001629446,0.00004830105,0.00004290678,0.0001325651,0.0000605649],"domain_scores_gemma":[0.9991172,0.0003001701,0.0001943001,0.00002478536,0.0002398145,0.0001237773],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004793066,0.001148445,0.3228344,0.001118716,0.0003071828,0.003434739,0.0008619758,0.001128919,0.291876,0.001859516,0.003022055,0.3676149],"study_design_scores_gemma":[0.0001579322,0.005026117,0.9175498,0.0008629406,0.0005831696,0.01490064,0.002558067,0.00582947,0.04124299,0.002168882,0.00906065,0.00005937097],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9444484,0.05137888,0.001012511,0.001820703,0.00007671869,0.00001441933,0.00004802481,0.000007926258,0.001192422],"genre_scores_gemma":[0.9895247,0.009357861,0.0006563361,0.0001449595,0.00007784167,0.000007116434,0.00002548785,0.000003016531,0.0002026585],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001231669,"threshold_uncertainty_score":0.004971087,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2076473459","doi":"10.1016/s0924-8579(99)00143-0","title":"Comparative in vitro activity of gatifloxacin, grepafloxacin, levofloxacin, moxifloxacin and trovafloxacin against 4151 Gram-negative and Gram-positive organisms","year":2000,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotics Pharmacokinetics and Efficacy","field":"Medicine","cited_by":95,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal University Hospital; St. Paul's Hospital; University of Saskatchewan","funders":"Bayer Corporation; Pfizer","keywords":"Gatifloxacin; Trovafloxacin; Moxifloxacin; Levofloxacin; Ciprofloxacin; Microbiology; Streptococcus pneumoniae; Medicine; Biology; Antibiotics","authors":[{"name":"Joseph M. Blondeau","is_ca":true},{"name":"Roman A. Laskowski","is_ca":true},{"name":"Jaime Bjarnason","is_ca":true},{"name":"Catherine Stewart","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0178165633340095,"gpt":0.3045928268879418,"spread":0.2867762635539323,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003915392,0.000568044,0.0007001271,0.0004591917,0.0002524047,0.0003765083,0.0004528795,0.0005702203,0.002408332],"category_scores_gemma":[0.0008326509,0.0002595069,0.0006942162,0.0005930235,0.0003652027,0.0004073672,0.0002094874,0.0006446532,0.0004991973],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002863535,"about_ca_system_score_gemma":0.0003330691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002918971,"about_ca_topic_score_gemma":0.003324796,"domain_scores_codex":[0.999446,0.0001877791,0.00008227711,0.00005822259,0.0001104081,0.00011528],"domain_scores_gemma":[0.9991215,0.0004295317,0.0001113636,0.00005266084,0.0001620695,0.0001228432],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.01204812,0.0008475367,0.001847054,0.000590767,0.0001091624,0.0002813476,0.0002033939,0.001056739,0.9712624,0.0001577484,0.0003267595,0.01126902],"study_design_scores_gemma":[0.0005959978,0.04142007,0.03539585,0.0000865469,0.0003868373,0.0009866665,0.000215434,0.001712899,0.9147838,0.00008759039,0.004270773,0.00005759913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872268,0.009121324,0.0003893083,0.0001140064,0.00009595504,0.00003457275,0.00110989,0.00003328766,0.001874823],"genre_scores_gemma":[0.9907155,0.004297479,0.0007074245,0.00006417288,0.00007991793,0.00002536581,0.001924963,0.00001376592,0.002171488],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002918971,"threshold_uncertainty_score":0.008056641,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2122570468","doi":"10.1016/j.ijantimicag.2015.03.013","title":"Antimicrobial susceptibility monitoring of mastitis pathogens isolated from acute cases of clinical mastitis in dairy cows across Europe: VetPath results","year":2015,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":89,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Vétoquinol (Canada)","funders":"Zoetis; Elanco Animal Health; Virbac; Meso Scale Diagnostics; Ceva Santé Animale; Novartis; Bayer","keywords":"Ceftiofur; Mastitis; Microbiology; Penicillin; Antibiotics; Tetracycline; Streptococcus uberis; Broth microdilution; Antibiotic resistance; Amoxicillin; Enrofloxacin; Staphylococcus aureus; Clavulanic acid; Cefalexin; Antimicrobial; Biology; Erythromycin; Medicine; Ampicillin; Bacteria; Minimum inhibitory concentration; Ciprofloxacin","authors":[{"name":"Valérie Thomas","is_ca":false},{"name":"Anno de Jong","is_ca":false},{"name":"Hilde Moyaert","is_ca":false},{"name":"Shabbir Simjee","is_ca":false},{"name":"Farid El Garch","is_ca":true},{"name":"Ian Morrissey","is_ca":false},{"name":"Hervé Marion","is_ca":false},{"name":"Michel Vallé","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1020022763453769,"gpt":0.3595468808550119,"spread":0.257544604509635,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001510739,0.0003282417,0.0003910236,0.001440391,0.0003513672,0.0009218138,0.0003131877,0.0005871895,0.000537344],"category_scores_gemma":[0.001548116,0.0001696754,0.0004158052,0.001355097,0.0003624634,0.0003823398,0.0006406893,0.0002058643,0.0001343629],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003778135,"about_ca_system_score_gemma":0.0003394597,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002692172,"about_ca_topic_score_gemma":0.002648248,"domain_scores_codex":[0.9986272,0.0002810814,0.0001928634,0.0004069278,0.0002921959,0.0001998238],"domain_scores_gemma":[0.9984779,0.0003660299,0.0004299044,0.00007957408,0.000506682,0.0001398968],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007721799,0.000235693,0.950912,0.0001164033,0.0001294202,0.000327735,0.0009276071,0.0002199466,0.0314486,0.00004738298,0.000134672,0.01472836],"study_design_scores_gemma":[0.00000793849,0.0004080452,0.9938339,0.0000231934,0.00006832604,0.0004366948,0.0006552766,0.0001404179,0.003719131,0.00001464625,0.0006876044,0.00000481434],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988004,0.000367091,0.0001408822,0.00001494881,0.000003577458,0.000009757667,0.0003735566,0.000002773397,0.0002869417],"genre_scores_gemma":[0.9976032,0.0003124369,0.0004906321,0.00006519588,0.000006074378,0.00001295048,0.001266933,0.000004043793,0.0002385754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002692172,"threshold_uncertainty_score":0.007989645,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3151745800","doi":"10.1016/j.ijantimicag.2021.106334","title":"Therapeutic plasma exchange in patients with life-threatening COVID-19: a randomised controlled clinical trial","year":2021,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":89,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Internal medicine; SOFA score; ARDS; Mechanical ventilation; Intensive care unit; Gastroenterology; Sepsis; Pulmonary embolism; Lung","authors":[{"name":"Fahad Faqihi","is_ca":false},{"name":"Abdulrahman Alharthy","is_ca":false},{"name":"Salman Abdulaziz","is_ca":false},{"name":"Abdullah Balhamar","is_ca":false},{"name":"Awad Al‐Omari","is_ca":false},{"name":"Zohair Al Aseri","is_ca":false},{"name":"Hani Tamim","is_ca":false},{"name":"Saleh A. Alqahtani","is_ca":false},{"name":"Demetrios J. Kutsogiannis","is_ca":true},{"name":"Peter G. Brindley","is_ca":true},{"name":"Dimitrios Karakitsos","is_ca":false},{"name":"Ziad A. Memish","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0905877628193334,"gpt":0.4411024946097393,"spread":0.3505147317904059,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00294949,0.002300833,0.006345445,0.0005936307,0.0006964967,0.002156105,0.001295911,0.004313916,0.009917419],"category_scores_gemma":[0.004694986,0.0008734372,0.004214679,0.0008458492,0.002159174,0.002073386,0.0008656333,0.004576392,0.00100511],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001104465,"about_ca_system_score_gemma":0.001602441,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001091258,"about_ca_topic_score_gemma":0.001490684,"domain_scores_codex":[0.9978741,0.001245521,0.0002016314,0.000288805,0.0001277262,0.0002621539],"domain_scores_gemma":[0.998021,0.0007613282,0.0004952778,0.0001432954,0.0001153041,0.0004638456],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","study_design_scores_codex":[0.9906549,0.001331315,0.000212021,0.001217794,0.001366129,0.00003174528,0.00002735936,0.00009503929,0.0004934031,0.00009702437,0.000358113,0.004115278],"study_design_scores_gemma":[0.9840057,0.01422108,0.0004465383,0.00009513671,0.0006535531,0.0000135697,0.00001863684,0.00008549603,0.00004942693,0.00009857704,0.0003015994,0.0000107062],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9099254,0.05947639,0.002598689,0.004271752,0.004808806,0.01225581,0.002043182,0.0002291423,0.004390929],"genre_scores_gemma":[0.9591431,0.01718411,0.003073855,0.003506133,0.001704308,0.01040058,0.001456457,0.00003363615,0.003497767],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009917419,"threshold_uncertainty_score":0.03317702,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2061664070","doi":"10.1016/j.ijantimicag.2010.06.045","title":"Antimicrobial treatment of nosocomial meticillin-resistant Staphylococcus aureus (MRSA) pneumonia: current and future options","year":2010,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":86,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Dalbavancin; Linezolid; Medicine; Tigecycline; Teicoplanin; Antimicrobial; Methicillin-resistant Staphylococcus aureus; Vancomycin; Quinupristin; Pneumonia; Fusidic acid; Staphylococcus aureus; Microbiology; Internal medicine; Biology","authors":[{"name":"Tobias Welte","is_ca":false},{"name":"Mathias W. Pletz","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03982333691623498,"gpt":0.358101877474147,"spread":0.318278540557912,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007708252,0.0005413396,0.0007148931,0.001114873,0.000205454,0.000799438,0.0006387764,0.001004741,0.006008099],"category_scores_gemma":[0.0007724086,0.0001293935,0.000435362,0.000963032,0.0004263209,0.001359031,0.0005035129,0.001523215,0.001633547],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004054953,"about_ca_system_score_gemma":0.0006923553,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003819597,"about_ca_topic_score_gemma":0.0009579231,"domain_scores_codex":[0.9997113,0.00007506021,0.00005412637,0.00004466092,0.00008098734,0.00003373332],"domain_scores_gemma":[0.9994362,0.0001812775,0.0001292685,0.00001472117,0.0001648829,0.00007359279],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001599552,0.0001372156,0.0001864766,0.007220737,0.00003690422,0.0001505259,0.00004574162,0.0001609976,0.001328051,0.001237196,0.02273148,0.9666047],"study_design_scores_gemma":[0.00009354234,0.0007896834,0.002537588,0.008040326,0.0002309202,0.002442091,0.0001867151,0.0002627619,0.0008444671,0.002177153,0.9823623,0.0000324268],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002493806,0.9972005,0.0001330294,0.0008537604,0.0002239406,0.000004633687,0.0000107794,0.000009554438,0.001314538],"genre_scores_gemma":[0.001810974,0.9962085,0.0002983504,0.0005311127,0.0005303156,0.000009724256,0.0000428842,0.000003481419,0.0005645974],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.006008099,"threshold_uncertainty_score":0.02009904,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4315644038","doi":"10.1016/j.ijantimicag.2023.106713","title":"Colistin: from the shadows to a One Health approach for addressing antimicrobial resistance","year":2023,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"Natural Sciences and Engineering Research Council of Canada; Centers for Disease Control and Prevention; Princeton University; National Science Foundation","keywords":"Colistin; MCR-1; Antimicrobial; Antibiotic resistance; Escherichia coli; Biology; Drug resistance; Biotechnology; Microbiology; Enterobacteriaceae; Antibiotics; Gene; Genetics","authors":[{"name":"Mohamed Rhouma","is_ca":true},{"name":"Jean-Yves Madec","is_ca":false},{"name":"Ramanan Laxminarayan","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1200455530351001,"gpt":0.3868258651063832,"spread":0.2667803120712831,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001356512,0.0009719678,0.001837536,0.001748524,0.0003056816,0.001744798,0.001242846,0.002236099,0.00381144],"category_scores_gemma":[0.001563857,0.0002398633,0.0005375732,0.00175626,0.001073055,0.002034432,0.0009956649,0.004641903,0.001723666],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001130461,"about_ca_system_score_gemma":0.002121386,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001592375,"about_ca_topic_score_gemma":0.003022071,"domain_scores_codex":[0.9995803,0.00009734979,0.00005009475,0.00006038138,0.0001676997,0.0000442007],"domain_scores_gemma":[0.999181,0.0004247318,0.00009807056,0.00002152055,0.0001744048,0.0001003433],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001568983,0.0000937652,0.0001215993,0.01069245,0.00008977224,0.0001263126,0.00004306448,0.0002319744,0.00090249,0.009318551,0.04472689,0.9334962],"study_design_scores_gemma":[0.00006178646,0.0002092542,0.000505931,0.005659008,0.000128625,0.0007319073,0.00006327328,0.0001082184,0.0003248977,0.003453616,0.9887301,0.00002331182],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0000538213,0.9978521,0.0001142519,0.001062252,0.0003794326,0.000002788599,0.00001109096,0.000008293759,0.0005160361],"genre_scores_gemma":[0.0005290683,0.9978648,0.0002409844,0.0006693238,0.0002731583,0.000004605563,0.00001395635,0.000001756524,0.0004023659],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.00381144,"threshold_uncertainty_score":0.01275057,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2116751273","doi":"10.1016/j.ijantimicag.2010.12.011","title":"Synergistic effect of lipopeptide biosurfactant with antibiotics against Escherichia coli CFT073 biofilm","year":2011,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Lipopeptide; Biofilm; Microbiology; Escherichia coli; Antibiotics; Chemistry; Bacteria; Biology; Biochemistry","authors":[{"name":"Fabrizio Rivardo","is_ca":true},{"name":"Maria Giovanna Martinotti","is_ca":false},{"name":"Raymond J. Turner","is_ca":true},{"name":"Howard Ceri","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01075234258955919,"gpt":0.2306267666674786,"spread":0.2198744240779194,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002112453,0.0005210487,0.0006259585,0.0002851871,0.000195398,0.0002849501,0.0003261362,0.0005457657,0.001267727],"category_scores_gemma":[0.000302011,0.0001925573,0.0005046812,0.0002417161,0.0001719046,0.0001914512,0.0003284737,0.0004918827,0.0002724451],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001801133,"about_ca_system_score_gemma":0.0003745358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001235749,"about_ca_topic_score_gemma":0.00167166,"domain_scores_codex":[0.9996969,0.00007907957,0.00003279879,0.00003292615,0.00009020368,0.00006819745],"domain_scores_gemma":[0.9998221,0.00006102906,0.00002370445,0.00001376041,0.00003371798,0.00004568822],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000596944,0.0001153578,0.000144594,0.00007601316,0.00001547407,0.00008179494,0.0000238124,0.0001093615,0.9970022,0.00003124251,0.00008040512,0.001722814],"study_design_scores_gemma":[0.0000243689,0.0009464177,0.00191203,0.000008777181,0.00002697785,0.0001036056,0.00002445285,0.0004171894,0.995905,0.00001041152,0.0006127834,0.000008046993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961423,0.00178124,0.0006531368,0.0001447364,0.00008102495,0.00003447414,0.0002070965,0.00003151718,0.0009244232],"genre_scores_gemma":[0.9950087,0.001016636,0.002191952,0.00009076207,0.00003133621,0.0000373072,0.000303167,0.000008947257,0.001311196],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001267727,"threshold_uncertainty_score":0.00424099,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2069582137","doi":"10.1016/j.ijantimicag.2008.07.011","title":"Toxin-binding treatment for Clostridium difficile: a review including reports of studies with tolevamer","year":2008,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Clostridium difficile; Antibiotics; Metronidazole; Clostridium difficile toxin A; Clostridium difficile toxin B; Microbiology; Medicine; Clostridium perfringens; Vancomycin; Intensive care medicine; Biology; Bacteria; Staphylococcus aureus","authors":[{"name":"Karl Weiss","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1875996129669491,"gpt":0.4554546942127973,"spread":0.2678550812458482,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007874401,0.0008357912,0.00273691,0.002051979,0.0001682345,0.0006939222,0.001020178,0.0008645271,0.002570967],"category_scores_gemma":[0.001247594,0.0002725067,0.001075442,0.00202509,0.0003343812,0.0008153578,0.0004240298,0.0009130081,0.0004501937],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003581992,"about_ca_system_score_gemma":0.0008570885,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007502689,"about_ca_topic_score_gemma":0.002348037,"domain_scores_codex":[0.9996467,0.00007643985,0.000109115,0.00005708822,0.0000854078,0.0000251796],"domain_scores_gemma":[0.9990563,0.0005704536,0.0002353892,0.00001602482,0.00008253583,0.00003940443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"systematic_review","study_design_scores_codex":[0.0007037488,0.0001819137,0.0003647705,0.1242199,0.0009263917,0.0004377622,0.00009061189,0.0001982274,0.003763515,0.0003183354,0.01085429,0.8579404],"study_design_scores_gemma":[0.001292389,0.003805217,0.009946061,0.06833921,0.01215437,0.008436009,0.0004201224,0.0003253856,0.006911958,0.0007261466,0.8875051,0.0001379198],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0003068535,0.999342,0.00005715045,0.00006326666,0.00005255655,0.000007106274,0.00001737379,0.000003203122,0.0001504548],"genre_scores_gemma":[0.002187353,0.9972076,0.0002056085,0.0001832648,0.00005089746,0.000009490002,0.00002739244,0.000001363313,0.000127037],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.00273691,"threshold_uncertainty_score":0.008600712,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2164281017","doi":"10.1016/j.ijantimicag.2009.02.002","title":"Association between fluoroquinolone usage and a dramatic rise in ciprofloxacin-resistant Streptococcus pneumoniae in Canada, 1997–2006","year":2009,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":74,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"Ontario Ministry of Health and Long-Term Care; Bristol-Myers Squibb Canada; Bristol-Myers Squibb","keywords":"Ciprofloxacin; Streptococcus pneumoniae; Medicine; Medical prescription; Population; Internal medicine; Microbiology; Environmental health; Pharmacology; Antibiotics; Biology","authors":[{"name":"Heather J. Adam","is_ca":true},{"name":"Daryl J. Hoban","is_ca":true},{"name":"Alfred S. Gin","is_ca":true},{"name":"George G. Zhanel","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01142522792016576,"gpt":0.2668589692653516,"spread":0.2554337413451859,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003523283,0.0002671095,0.0003457359,0.001207282,0.001275591,0.001332851,0.00125109,0.001268869,0.002083356],"category_scores_gemma":[0.002095763,0.0003390728,0.0006715734,0.003623315,0.0006361533,0.0004112968,0.0005763082,0.001931177,0.0002092493],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01825253,"about_ca_system_score_gemma":0.02834153,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9875892,"about_ca_topic_score_gemma":0.9913622,"domain_scores_codex":[0.9991147,0.00003905706,0.00008612339,0.0001056028,0.0003625462,0.0002919313],"domain_scores_gemma":[0.9969279,0.000125657,0.0007844495,0.0000496206,0.001340575,0.0007718033],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000176254,0.0000397273,0.9943462,0.00003129982,0.00007911281,0.0002367729,0.0001313617,0.0001233002,0.0002452352,0.00005180953,0.00168768,0.002851295],"study_design_scores_gemma":[0.000003767916,0.00001274208,0.9986928,0.00001292043,0.00002293156,0.000125869,0.0003034601,0.0001058462,0.00004165374,0.000004752207,0.0006678211,0.000005450963],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9806429,0.003596753,0.0001623261,0.002553142,0.0001068544,0.00003949626,0.008801015,0.00003659574,0.004061105],"genre_scores_gemma":[0.9947439,0.001251098,0.0001752793,0.0004640098,0.00003791646,0.000009135053,0.001934832,0.000008725094,0.001375143],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01825253,"threshold_uncertainty_score":0.132432,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1969590745","doi":"10.1016/j.ijantimicag.2011.02.010","title":"First outbreak of VIM-2 metallo-β-lactamase-producing Pseudomonas aeruginosa in The Netherlands: microbiology, epidemiology and clinical outcomes","year":2011,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Imipenem; Multiple Loci VNTR Analysis; Pseudomonas aeruginosa; Microbiology; Outbreak; Genotyping; Biology; Virology; Medicine; Antibiotics; Antibiotic resistance; Genotype; Bacteria; Gene; Genetics","authors":[{"name":"Akke K. van der Bij","is_ca":false},{"name":"Rosa van Mansfeld","is_ca":false},{"name":"Gisele Peirano","is_ca":true},{"name":"Wil H. F. Goessens","is_ca":false},{"name":"Juliëtte A. Severin","is_ca":false},{"name":"Johann Pitout","is_ca":true},{"name":"Rob J. L. Willems","is_ca":false},{"name":"Mireille van Westreenen","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0500246390283292,"gpt":0.331382928792387,"spread":0.2813582897640578,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004303509,0.0005592672,0.0005527294,0.0007211476,0.0009383028,0.001277751,0.0006200257,0.001705867,0.001783772],"category_scores_gemma":[0.002344031,0.0005411178,0.0005141086,0.0006637147,0.0005772989,0.001048768,0.0008818245,0.001103233,0.0002946446],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001557781,"about_ca_system_score_gemma":0.001387168,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0360953,"about_ca_topic_score_gemma":0.02554904,"domain_scores_codex":[0.9993135,0.0001215563,0.00008500827,0.000156292,0.0001026089,0.0002210153],"domain_scores_gemma":[0.9985865,0.0002182992,0.0002931081,0.0000757556,0.0002764555,0.0005499091],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000601488,0.00065982,0.9456477,0.0001189741,0.0001121838,0.04161751,0.001659648,0.0001888428,0.002739315,0.0001469867,0.001197689,0.005309896],"study_design_scores_gemma":[0.00008576171,0.001018815,0.9444584,0.00008910938,0.0001031952,0.04201723,0.007655294,0.0006007952,0.001384332,0.0001990298,0.002309656,0.000078274],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969729,0.0002970368,0.0002489464,0.0002908377,0.0000355719,0.00006171646,0.0003618602,0.00001112498,0.001720133],"genre_scores_gemma":[0.9986646,0.0001906033,0.0001668052,0.0001304978,0.0000325835,0.00001392467,0.0002168592,0.000008608594,0.0005754307],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0360953,"threshold_uncertainty_score":0.07177037,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2095436061","doi":"10.1016/j.ijantimicag.2011.01.006","title":"Activity of the efflux pump inhibitor phenylalanine-arginine β-naphthylamide against the AdeFGH pump of Acinetobacter baumannii","year":2011,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Tech University","funders":"","keywords":"Efflux; Acinetobacter baumannii; Microbiology; Pseudomonas aeruginosa; Antibiotics; Multiple drug resistance; Chloramphenicol; Biology; Chemistry; Bacteria; Biochemistry; Genetics","authors":[{"name":"Jenny Cortez-Cordova","is_ca":true},{"name":"Ayush Kumar","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01670827058845335,"gpt":0.2480539626626588,"spread":0.2313456920742054,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001654528,0.0002880753,0.0003823768,0.0001666437,0.0001295473,0.0002557866,0.000218612,0.0001983956,0.00071086],"category_scores_gemma":[0.0003222199,0.000107121,0.0001469036,0.0002204886,0.0001234696,0.0001756652,0.0001011289,0.0003161215,0.0001965768],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002995089,"about_ca_system_score_gemma":0.0002707555,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002602336,"about_ca_topic_score_gemma":0.001960269,"domain_scores_codex":[0.9998412,0.00003889768,0.00002025821,0.00001967914,0.00005028207,0.00002963715],"domain_scores_gemma":[0.9998827,0.00004163291,0.00001890031,0.00001316141,0.00002452641,0.0000189507],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005330623,0.0001046908,0.0004021184,0.00005787526,0.00001332664,0.00004021531,0.00002054167,0.0002567799,0.9961553,0.00004293494,0.00009213446,0.002281078],"study_design_scores_gemma":[0.00004887261,0.0009664415,0.004496636,0.000006449748,0.0000278709,0.0001507841,0.00002609638,0.001998883,0.9913734,0.00001915811,0.0008770403,0.000008237954],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970969,0.001482955,0.0002766685,0.00009105209,0.00003137235,0.000009841873,0.0002671631,0.00003377259,0.0007102803],"genre_scores_gemma":[0.9974704,0.0006302294,0.000528713,0.00002516594,0.00001411856,0.000009252003,0.0005831199,0.000008829224,0.0007302699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002602336,"threshold_uncertainty_score":0.005174398,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2790007306","doi":"10.1016/j.ijantimicag.2018.02.006","title":"Host defense cathelicidins in cattle: types, production, bioactive functions and potential therapeutic and diagnostic applications","year":2018,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Antimicrobial peptides; Antibiotics; Antimicrobial; Immune system; Mastitis; Microbiology; Immunology","authors":[{"name":"Morgan Young‐Speirs","is_ca":true},{"name":"Dominique Drouin","is_ca":true},{"name":"Paloma A. Cavalcante","is_ca":true},{"name":"Herman W. Barkema","is_ca":true},{"name":"Eduardo R. Cobo","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0231960555535545,"gpt":0.2880182906983048,"spread":0.2648222351447503,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006273965,0.0005921067,0.0008574749,0.00152215,0.0001719545,0.0009461517,0.0004877476,0.0006971715,0.001237836],"category_scores_gemma":[0.0006112613,0.0001944164,0.0002421534,0.001408341,0.0004002143,0.0008286545,0.0004476375,0.001305117,0.0005426715],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000307614,"about_ca_system_score_gemma":0.0009203829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006595731,"about_ca_topic_score_gemma":0.001137512,"domain_scores_codex":[0.9998181,0.00002603126,0.00003123972,0.00002853408,0.00007412945,0.00002200783],"domain_scores_gemma":[0.9996976,0.0001258917,0.00007432394,0.000007285042,0.00006857538,0.00002644895],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002046132,0.00006722178,0.0005800169,0.01134315,0.00008236554,0.0002657555,0.00007152058,0.0002472903,0.008193086,0.00149254,0.007111726,0.9703406],"study_design_scores_gemma":[0.00003519432,0.0003199845,0.003460944,0.003859861,0.0002431398,0.003509806,0.0001639204,0.0001665597,0.005385052,0.001502614,0.9813128,0.00004016505],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004367501,0.99884,0.000126466,0.0001385039,0.0001043349,0.000003027024,0.00002044605,0.000003225269,0.0003273324],"genre_scores_gemma":[0.001958722,0.9971099,0.0002772236,0.00008949813,0.0001445474,0.000003934172,0.00003437792,7.24165e-7,0.0003811014],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.00152215,"threshold_uncertainty_score":0.004140973,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1968652456","doi":"10.1016/j.ijantimicag.2010.02.016","title":"Molecular characteristics of extended-spectrum β-lactamase-producing Escherichia coli from the Chicago area: high prevalence of ST131 producing CTX-M-15 in community hospitals","year":2010,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":69,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Foreign Affairs and International Trade Canada; Calgary Laboratory Services","keywords":"Escherichia coli; Microbiology; Beta-lactamase; Medicine; Environmental health; Biology; Genetics; Gene","authors":[{"name":"Gisele Peirano","is_ca":true},{"name":"Mike Costello","is_ca":false},{"name":"Johann Pitout","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008130468767392495,"gpt":0.2483062315797012,"spread":0.2401757628123087,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001413512,0.0004152833,0.0002464299,0.001783038,0.000491196,0.0006398296,0.0002493744,0.0004467517,0.001685676],"category_scores_gemma":[0.0005746218,0.0002659117,0.0001299194,0.001161933,0.0003787374,0.0001994366,0.0002803839,0.0003287832,0.0002540813],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002685361,"about_ca_system_score_gemma":0.0003314486,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01152304,"about_ca_topic_score_gemma":0.007899915,"domain_scores_codex":[0.9998065,0.00002235001,0.00002281417,0.00005134619,0.00004164817,0.00005546746],"domain_scores_gemma":[0.9994358,0.000127575,0.0001058739,0.00001428677,0.0001084259,0.0002079985],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004059912,0.0001582027,0.962244,0.00002495869,0.00002342533,0.001053637,0.0005583219,0.00009629047,0.03335588,0.00003863861,0.0001871259,0.001853612],"study_design_scores_gemma":[0.0000118811,0.0002243657,0.9955099,0.000005293759,0.00002359047,0.0008444129,0.0009523915,0.0001683479,0.00201873,0.00001741519,0.0002181043,0.000005573085],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994851,0.00004085715,0.00002735357,0.00001612821,0.000002831424,0.000005955896,0.0001581114,0.000001988341,0.000261518],"genre_scores_gemma":[0.9992914,0.00006072318,0.00006797607,0.00003319388,0.0000129184,0.000006431032,0.0003395088,0.000002141192,0.0001856865],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01152304,"threshold_uncertainty_score":0.02291191,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2020521921","doi":"10.1016/j.ijantimicag.2011.08.018","title":"Carbapenem stewardship: does ertapenem affect Pseudomonas susceptibility to other carbapenems? A review of the evidence","year":2011,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Sanofi Pasteur; Viropharma; Achaogen; Merck; Bayer Canada; AstraZeneca","keywords":"Ertapenem; Meropenem; Doripenem; Imipenem; Carbapenem; Pseudomonas aeruginosa; Microbiology; Medicine; Antibiotics; Intensive care medicine; Biology; Antibiotic resistance; Bacteria","authors":[{"name":"David P. Nicolau","is_ca":false},{"name":"Yehuda Carmeli","is_ca":false},{"name":"Christopher W. Crank","is_ca":false},{"name":"Debra A. Goff","is_ca":false},{"name":"Christopher J. Graber","is_ca":false},{"name":"Ana Lúcia Lei Munhoz Lima","is_ca":false},{"name":"Ellie J. C. Goldstein","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04289154408982569,"gpt":0.3512213711360568,"spread":0.3083298270462311,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001497732,0.0008549466,0.00306166,0.002077686,0.0002202318,0.001231097,0.00113796,0.001552953,0.00219167],"category_scores_gemma":[0.003347996,0.0003342324,0.001111576,0.002836534,0.0005265845,0.001267439,0.0005335418,0.001390261,0.0005706131],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007595569,"about_ca_system_score_gemma":0.001586651,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002031477,"about_ca_topic_score_gemma":0.003948905,"domain_scores_codex":[0.9995028,0.00009099134,0.0001307761,0.00009216915,0.0001529924,0.00003027053],"domain_scores_gemma":[0.9973027,0.001714145,0.0004215129,0.00003198453,0.0004534819,0.00007631386],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"systematic_review","study_design_scores_codex":[0.0003283473,0.00007565412,0.0008623429,0.06517784,0.0006551418,0.0002198191,0.00005086079,0.000185648,0.0008896483,0.0007835497,0.01804982,0.9127214],"study_design_scores_gemma":[0.0002332944,0.0008029892,0.01317351,0.1078574,0.006610607,0.004734089,0.00042614,0.0004190698,0.001640714,0.002911141,0.8610757,0.0001154375],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00006028665,0.9996494,0.00001519823,0.0001471338,0.0000405314,0.000001149278,0.000008167552,7.416423e-7,0.00007730239],"genre_scores_gemma":[0.0004935318,0.9991857,0.00006184053,0.0001337553,0.00006923737,0.000001930981,0.00001062459,3.900642e-7,0.00004298247],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.00306166,"threshold_uncertainty_score":0.007920861,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1979867613","doi":"10.1016/j.ijantimicag.2005.10.005","title":"Mutant prevention concentration for ciprofloxacin and levofloxacin with Pseudomonas aeruginosa","year":2006,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"St. Paul's Hospital; Royal University Hospital; University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Levofloxacin; Ciprofloxacin; Microbiology; Pseudomonas aeruginosa; Minimum inhibitory concentration; Ofloxacin; Population; Mutant; Chemistry; Biology; Medicine; Bacteria; Antimicrobial; Antibiotics; Biochemistry","authors":[{"name":"Glen Hansen","is_ca":true},{"name":"Xilin Zhao","is_ca":false},{"name":"Karl Drlica","is_ca":false},{"name":"Joseph M. Blondeau","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008520458607619196,"gpt":0.2611176860574644,"spread":0.2525972274498452,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002632406,0.0004486837,0.0004761951,0.0004114169,0.0003060677,0.0004079056,0.0005446655,0.0006527515,0.005318667],"category_scores_gemma":[0.0007942114,0.0003183803,0.0004142612,0.0002545684,0.0002405959,0.0002530164,0.0002462638,0.0006796806,0.0006714893],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004268391,"about_ca_system_score_gemma":0.0004659492,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004850648,"about_ca_topic_score_gemma":0.002969592,"domain_scores_codex":[0.9993163,0.0001335896,0.00006417716,0.0001015018,0.0002247359,0.0001595823],"domain_scores_gemma":[0.9994683,0.0001686496,0.00006942419,0.00006486238,0.0001466998,0.00008214801],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005672026,0.0001897236,0.0007344341,0.00003672625,0.00001136519,0.00005156821,0.00002829194,0.0001234459,0.9965122,0.0001776913,0.0001518572,0.001415381],"study_design_scores_gemma":[0.00002212944,0.001167042,0.005422932,0.000005819074,0.00002111042,0.0002196662,0.00005319453,0.001075411,0.9910979,0.00005355634,0.0008533149,0.000007886666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944645,0.0005206378,0.001680889,0.0002053169,0.00008253712,0.00005345785,0.0005643736,0.0001366339,0.002291752],"genre_scores_gemma":[0.9904487,0.000216597,0.001698155,0.00006710163,0.00001940335,0.00004897505,0.001095952,0.00004253549,0.006362621],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005318667,"threshold_uncertainty_score":0.0177927,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2900529511","doi":"10.1016/j.ijantimicag.2018.11.011","title":"Intrapulmonary pharmacokinetics of antibiotics used to treat nosocomial pneumonia caused by Gram-negative bacilli: A systematic review","year":2018,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Nosocomial Infections in ICU","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Health and Medical Research Council; Medical Research Council Canada; Tufts University School of Medicine; University of Queensland","keywords":"Medicine; Antibiotics; Interquartile range; Colistin; Pneumonia; Pharmacokinetics; Amikacin; Dosing; Aminoglycoside; Internal medicine; Intensive care medicine; Microbiology; Biology","authors":[{"name":"Aaron J. Heffernan","is_ca":false},{"name":"Fekade B. Sime","is_ca":false},{"name":"Jeffrey Lipman","is_ca":false},{"name":"Jayesh Dhanani","is_ca":false},{"name":"Katherine T. Andrews","is_ca":false},{"name":"David Ellwood","is_ca":false},{"name":"Keith Grimwood","is_ca":false},{"name":"Jason A. Roberts","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05176673252964952,"gpt":0.3907317769554629,"spread":0.3389650444258133,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002149167,0.001246175,0.007033806,0.00333988,0.0003556805,0.001748817,0.001450824,0.001715817,0.002591326],"category_scores_gemma":[0.01043559,0.0007948712,0.008971487,0.003912814,0.0005319346,0.001443877,0.0009320856,0.001366,0.0002002612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001323318,"about_ca_system_score_gemma":0.003172469,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005446252,"about_ca_topic_score_gemma":0.01650461,"domain_scores_codex":[0.9979864,0.0004534253,0.0008878064,0.0002276323,0.0003486614,0.00009599773],"domain_scores_gemma":[0.993692,0.004031757,0.001625995,0.00009070354,0.0004544551,0.0001051685],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","study_design_scores_codex":[0.000915581,0.00005403891,0.001505968,0.9269288,0.03325512,0.0001738682,0.0001646461,0.0001682119,0.0004092737,0.0001147087,0.001058018,0.03525176],"study_design_scores_gemma":[0.001574814,0.001140669,0.01490278,0.4600106,0.4938306,0.001206827,0.0005274306,0.0002482566,0.0005956116,0.0003381742,0.02548907,0.000135054],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001517148,0.9980569,0.000063449,0.00004696621,0.00004941752,0.00006656218,0.000112453,0.000004054632,0.00008297428],"genre_scores_gemma":[0.02013175,0.978852,0.0004062494,0.0002943665,0.00005410767,0.00007955429,0.0001045093,0.000003681799,0.00007377777],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.007033806,"threshold_uncertainty_score":0.01136601,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2896714347","doi":"10.1016/j.ijantimicag.2018.10.002","title":"Synergistic microbicidal effect of cationic antimicrobial peptides and teicoplanin against planktonic and biofilm-encased Staphylococcus aureus","year":2018,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Infection and Immunity","funders":"Seventh Framework Programme; Eberhard Karls Universität Tübingen","keywords":"Teicoplanin; Staphylococcus aureus; Microbiology; Antibiotics; Biofilm; Antimicrobial; Staphylococcus epidermidis; Antibiotic resistance; Methicillin-resistant Staphylococcus aureus; Chemistry; Staphylococcal infections; Multidrug tolerance; Biology; Bacteria; Vancomycin","authors":[{"name":"Bruce C. Koppen","is_ca":false},{"name":"Patrick P. G. Mulder","is_ca":false},{"name":"Leonie de Boer","is_ca":false},{"name":"Martijn Riool","is_ca":false},{"name":"Jan W. Drijfhout","is_ca":false},{"name":"Sebastian A. J. Zaat","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00767550941486196,"gpt":0.2479036347921428,"spread":0.2402281253772808,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002077244,0.0003849289,0.000298943,0.0001636553,0.0001219398,0.0001901909,0.0001341692,0.0002817218,0.00109184],"category_scores_gemma":[0.0002811969,0.0001281022,0.000244699,0.00009474191,0.0001725238,0.0001622278,0.0002179565,0.000359167,0.00009821678],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008552729,"about_ca_system_score_gemma":0.0003210712,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004077151,"about_ca_topic_score_gemma":0.000781921,"domain_scores_codex":[0.9998459,0.00004154413,0.0000102064,0.00001773312,0.00003698953,0.0000476954],"domain_scores_gemma":[0.9998622,0.00003909952,0.00001921297,0.000006605896,0.00001853657,0.00005424829],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001492012,0.0001429912,0.0002579221,0.00007520435,0.0000112922,0.00008707059,0.00002190511,0.000194984,0.9938182,0.00003759932,0.00004793184,0.003812796],"study_design_scores_gemma":[0.0002365222,0.01303277,0.01027719,0.00002853466,0.00008936921,0.0003573923,0.0001078607,0.00140015,0.9727174,0.00006003147,0.001676692,0.00001602986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980952,0.001011624,0.0002038688,0.00003340768,0.00003480906,0.00001618026,0.00004362908,0.000006082018,0.0005551525],"genre_scores_gemma":[0.9980217,0.0005749031,0.0006951289,0.00002703965,0.000020374,0.00001561229,0.00005553809,0.000001729633,0.0005879963],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00109184,"threshold_uncertainty_score":0.003652573,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2157068725","doi":"10.1016/j.ijantimicag.2006.07.021","title":"Examination of cfiA-mediated carbapenem resistance in Bacteroides fragilis strains from a European antibiotic susceptibility survey","year":2006,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Canadian Food Inspection Agency","keywords":"Bacteroides fragilis; Imipenem; Carbapenem; Microbiology; Meropenem; Biology; Antibiotics; Antibiotic resistance","authors":[{"name":"József Sóki","is_ca":false},{"name":"Richard Edwards","is_ca":false},{"name":"M. Hedberg","is_ca":false},{"name":"Hong Fang","is_ca":false},{"name":"E. Nagy","is_ca":false},{"name":"C. E. Nord","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01861932782231735,"gpt":0.2560934084514555,"spread":0.2374740806291382,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007876356,0.0005563383,0.0004258862,0.002732388,0.0004864775,0.0005581641,0.0003128678,0.0005928032,0.0009185011],"category_scores_gemma":[0.001580601,0.0002101422,0.0003988432,0.001302922,0.0003488097,0.0002472989,0.0005096481,0.0002835671,0.0002675183],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003630167,"about_ca_system_score_gemma":0.0002379332,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00866757,"about_ca_topic_score_gemma":0.004483706,"domain_scores_codex":[0.9992901,0.0001307907,0.00009248321,0.0001666943,0.0001443552,0.0001755745],"domain_scores_gemma":[0.9990421,0.0002021063,0.0002294427,0.00006253914,0.0002989813,0.0001648622],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001560599,0.0003722205,0.6734028,0.00009971266,0.0001524285,0.001988248,0.002179896,0.0002281588,0.3027875,0.0001173837,0.0001850483,0.01692604],"study_design_scores_gemma":[0.000009394255,0.0004644976,0.9874402,0.00001024164,0.00005891496,0.00197703,0.0006715581,0.0001067293,0.008430113,0.00001150262,0.0008110614,0.000008669577],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991477,0.0001111382,0.0001724452,0.00001726305,0.000002237095,0.000009777438,0.0002211144,0.000003201931,0.0003151283],"genre_scores_gemma":[0.9987448,0.0001107529,0.0002445468,0.00003730936,0.000005040406,0.000007766441,0.0005599677,0.000002727263,0.0002870075],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00866757,"threshold_uncertainty_score":0.01723421,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2013443868","doi":"10.1016/s0924-8579(00)00353-8","title":"Oral fluoroquinolone therapy results in drug adsorption on ureteral stents and prevention of biofilm formation","year":2001,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brampton Civic Hospital; Lawson Health Research Institute; Western University","funders":"Bayer HealthCare","keywords":"Ofloxacin; Ciprofloxacin; Enterococcus faecalis; Antibiotics; Minimum inhibitory concentration; Pseudomonas aeruginosa; Biofilm; Microbiology; Urine; Medicine; Enterococcus; Chemistry; Pharmacology; Bacteria; Staphylococcus aureus; Internal medicine; Biology","authors":[{"name":"Gregor Reid","is_ca":true},{"name":"Marc Habash","is_ca":true},{"name":"D. Vachon","is_ca":true},{"name":"John D. Denstedt","is_ca":true},{"name":"JOHN V. RIDDELL","is_ca":true},{"name":"Mojtaba Beheshti","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03856837036996263,"gpt":0.318101730852867,"spread":0.2795333604829043,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002308954,0.0002194795,0.0005301653,0.0002070217,0.0003461224,0.0003634717,0.0001480842,0.0005783607,0.002606005],"category_scores_gemma":[0.0008600315,0.0002204304,0.0006492498,0.0001440015,0.0002056679,0.0002449878,0.0002167785,0.0003434146,0.0002843718],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001580332,"about_ca_system_score_gemma":0.0003052159,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008964608,"about_ca_topic_score_gemma":0.001306644,"domain_scores_codex":[0.9996923,0.00006460619,0.00002580505,0.00003209458,0.00009698297,0.00008815137],"domain_scores_gemma":[0.9995964,0.0001459691,0.0001008858,0.00003455481,0.00004354636,0.00007859992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.01270937,0.001816738,0.0384687,0.0004066587,0.0001714949,0.002760156,0.0002206672,0.0002335708,0.8554603,0.0001831242,0.0009742643,0.08659489],"study_design_scores_gemma":[0.0002788754,0.01245053,0.4202291,0.00007188223,0.0003742953,0.01166353,0.0004341201,0.001500949,0.5489691,0.0001964779,0.003790396,0.00004084784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965312,0.002186141,0.0003567387,0.0001152393,0.00002955386,0.00001292034,0.00002830697,0.00001575992,0.0007241906],"genre_scores_gemma":[0.998107,0.0005293222,0.0004418571,0.00004685618,0.0000150562,0.000004160373,0.00005171477,0.000005042792,0.0007990083],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002606005,"threshold_uncertainty_score":0.008717954,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1970503235","doi":"10.1016/s0924-8579(00)00270-3","title":"Resistance to antiretroviral drugs in patients with primary HIV-1 infection","year":2000,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal Victoria Hospital; Montreal Clinical Research Institute; Jewish General Hospital","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Virology; Genotype; Reverse transcriptase; Drug resistance; Transmission (telecommunications); Biology; Lentivirus; Nucleoside Reverse Transcriptase Inhibitor; Multiple drug resistance; Viral load; Viral disease; Virus; Medicine; Microbiology; Genetics; RNA; Antiretroviral therapy; Gene","authors":[{"name":"Bluma Brenner","is_ca":true},{"name":"Mark A. Wainberg","is_ca":true},{"name":"Horacio Salomón","is_ca":true},{"name":"Danielle Rouleau","is_ca":false},{"name":"André Dascal","is_ca":true},{"name":"Bonnie Spira","is_ca":true},{"name":"R P Sékaly","is_ca":true},{"name":"Brian Conway","is_ca":false},{"name":"Jean‐Pierre Routy","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.004898061892324394,"gpt":0.2311947620192762,"spread":0.2262967001269518,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003899293,0.0003372544,0.0008988369,0.0009986907,0.0007670472,0.001114954,0.0003186499,0.001164418,0.004045864],"category_scores_gemma":[0.004888666,0.0003551239,0.0004720789,0.001022706,0.0003910894,0.0006692203,0.0004132395,0.001366247,0.0003882772],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003852338,"about_ca_system_score_gemma":0.0004073354,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002332641,"about_ca_topic_score_gemma":0.003003152,"domain_scores_codex":[0.9994093,0.0001739402,0.00007805081,0.00008163274,0.0001184227,0.0001386865],"domain_scores_gemma":[0.9979044,0.0007835457,0.000674994,0.00006564881,0.0001737348,0.0003977477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002934925,0.0001092227,0.9950989,0.00003035751,0.00004631453,0.0006959966,0.0001539538,0.00003322173,0.0001873897,0.00002180948,0.0002103865,0.003118861],"study_design_scores_gemma":[0.00002488012,0.0003777499,0.9943387,0.0000294747,0.00007131526,0.004187833,0.0003999419,0.0002123933,0.00006786881,0.00005719598,0.000224565,0.000008083355],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959595,0.001627078,0.00004395588,0.0003350155,0.00002971844,0.00001295538,0.0001898084,0.000008171184,0.001793867],"genre_scores_gemma":[0.9991078,0.0003943928,0.0000452125,0.0001554087,0.00003453758,0.000006036415,0.00008701615,0.000001829364,0.000167872],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004045864,"threshold_uncertainty_score":0.01353478,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2082984958","doi":"10.1016/j.ijantimicag.2011.07.016","title":"Antibiotic treatment duration for bloodstream infections in critically ill patients: a national survey of Canadian infectious diseases and critical care specialists","year":2011,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Use and Resistance","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto; Sunnybrook Hospital","funders":"Canadian Institutes of Health Research; Ontario Ministry of Health and Long-Term Care; Health Research Board","keywords":"Medicine; Antibiotics; Internal medicine; Pneumonia; Intensive care medicine; Urinary system; Bloodstream infection; Biology","authors":[{"name":"Nick Daneman","is_ca":true},{"name":"Kevin Shore","is_ca":true},{"name":"Ruxandra Pinto","is_ca":true},{"name":"Rob Fowler","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02762514025772884,"gpt":0.2868764496624064,"spread":0.2592513094046776,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007505192,0.0003827784,0.0005813285,0.001850355,0.001862815,0.001072153,0.001587422,0.001135076,0.00249625],"category_scores_gemma":[0.004185564,0.0005604153,0.0009866101,0.004519249,0.0005594293,0.0006146169,0.0007751705,0.001236884,0.0002088586],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01826351,"about_ca_system_score_gemma":0.01964794,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9786184,"about_ca_topic_score_gemma":0.9862031,"domain_scores_codex":[0.9981511,0.0001111807,0.0001971091,0.0002061952,0.0007742138,0.0005600633],"domain_scores_gemma":[0.9948785,0.000330292,0.001670197,0.00007520917,0.001651646,0.001394155],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004217186,0.00003592032,0.9972704,0.00003472319,0.0000514398,0.00004761811,0.0003756091,0.00004042858,0.00007928126,0.00002172826,0.0008338367,0.00116691],"study_design_scores_gemma":[0.000002905356,0.00001679393,0.9990376,0.00001711539,0.00001240063,0.00003791253,0.0005433895,0.00005037022,0.000008554177,0.000003021277,0.0002641064,0.000005849067],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9886032,0.001697941,0.00009155054,0.001210014,0.00002872546,0.00005364679,0.005557923,0.00001636064,0.002740483],"genre_scores_gemma":[0.9967781,0.0007844943,0.0001526552,0.000460743,0.00001557399,0.00001944205,0.001418985,0.000005199429,0.0003649687],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02138162,"threshold_uncertainty_score":0.1325116,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2134499284","doi":"10.1016/j.ijantimicag.2004.08.003","title":"Role of efflux mechanisms on fluoroquinolone resistance in Streptococcus pneumoniae and Pseudomonas aeruginosa","year":2004,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"","keywords":"Efflux; Pseudomonas aeruginosa; Streptococcus pneumoniae; Microbiology; Antibiotics; Bacteria; Biology; Antibiotic resistance; Antimicrobial; Biochemistry; Genetics","authors":[{"name":"George G. Zhanel","is_ca":true},{"name":"Daryl J. Hoban","is_ca":true},{"name":"Kristen N. Schurek","is_ca":true},{"name":"James A. Karlowsky","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01261639592125833,"gpt":0.2915246569233278,"spread":0.2789082610020694,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008574986,0.0009672058,0.002219258,0.001461837,0.0003220362,0.001353467,0.001251683,0.001742757,0.001516006],"category_scores_gemma":[0.000833577,0.0003244674,0.0004834171,0.002004814,0.0006101223,0.001531712,0.0005712098,0.001498855,0.001200241],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007618716,"about_ca_system_score_gemma":0.001029223,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001196378,"about_ca_topic_score_gemma":0.001779163,"domain_scores_codex":[0.9997514,0.00004297368,0.0000367844,0.00004234917,0.00009732495,0.00002912918],"domain_scores_gemma":[0.9995396,0.0001958323,0.00006221843,0.00001283436,0.000160011,0.00002949762],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002618119,0.00009066366,0.0003530942,0.01169493,0.00008919967,0.0005882262,0.00007868556,0.0004261883,0.008445956,0.002537086,0.01755735,0.9578769],"study_design_scores_gemma":[0.00004780937,0.0002691257,0.001954012,0.002576363,0.0002519787,0.002603711,0.0001186677,0.0002005653,0.003227475,0.001671962,0.9870443,0.00003397147],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002827367,0.9987289,0.0001615205,0.0001956742,0.000171675,0.000002364616,0.000007949899,0.000005027815,0.0004440475],"genre_scores_gemma":[0.0009798236,0.997895,0.000212633,0.0001527779,0.0002037405,0.000004270577,0.00001925753,9.475895e-7,0.0005315212],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002219258,"threshold_uncertainty_score":0.005527735,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2012089158","doi":"10.1016/j.ijantimicag.2014.04.011","title":"Phylogenetic and molecular insights into the evolution of multidrug-resistant porcine enterotoxigenic Escherichia coli in Australia","year":2014,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"","keywords":"Phylogenetic tree; Enterotoxigenic Escherichia coli; Multiple drug resistance; Escherichia coli; Biology; Phylogenetics; Microbiology; Genetics; Evolutionary biology; Drug resistance; Gene","authors":[{"name":"Sam Abraham","is_ca":false},{"name":"Darren J. Trott","is_ca":false},{"name":"David Jordan","is_ca":false},{"name":"David M. Gordon","is_ca":false},{"name":"Mitchell D. Groves","is_ca":false},{"name":"John M. Fairbrother","is_ca":true},{"name":"Matthew G. Smith","is_ca":false},{"name":"Ren Zhang","is_ca":false},{"name":"Toni A. Chapman","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007311816735241368,"gpt":0.2563432177721255,"spread":0.2490314010368841,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005225164,0.0002043516,0.0002283867,0.001649695,0.0007750586,0.0007659317,0.0003275084,0.0004434837,0.0008253173],"category_scores_gemma":[0.0008967112,0.0002342095,0.0002153523,0.001376817,0.0005193413,0.0004188094,0.0008509025,0.0006415072,0.0001918203],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008766033,"about_ca_system_score_gemma":0.000679692,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01571245,"about_ca_topic_score_gemma":0.02007369,"domain_scores_codex":[0.9996806,0.00007626622,0.00002307395,0.0000632951,0.00006196155,0.00009470365],"domain_scores_gemma":[0.9991754,0.0001167989,0.0002463078,0.00003886399,0.0002510767,0.0001715941],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001208198,0.0003552788,0.5577462,0.0001727169,0.0001176435,0.002243272,0.01232228,0.001254843,0.3687773,0.002303992,0.0001723864,0.05332589],"study_design_scores_gemma":[0.000005272797,0.0001749825,0.9928169,0.00002503779,0.00002026485,0.0006405068,0.001910429,0.0006914681,0.001494275,0.0001239847,0.002087515,0.000009310009],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984895,0.000157834,0.0003208246,0.00006369832,0.00000217639,0.000007586198,0.00002423337,0.000001643227,0.0009324285],"genre_scores_gemma":[0.9984753,0.0002786435,0.0003768957,0.00004924949,0.000004217357,0.000004835081,0.00007632567,0.000003148405,0.0007314623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01571245,"threshold_uncertainty_score":0.03124195,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4210394322","doi":"10.1016/j.ijantimicag.2022.106535","title":"Prevalence of ESBL non-CRE Escherichia coli and Klebsiella pneumoniae among clinical isolates collected by the SMART global surveillance programme from 2015 to 2019","year":2022,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"Merck Sharp and Dohme; Merck","keywords":"Broth microdilution; Klebsiella pneumoniae; Escherichia coli; Biology; Microbiology; Ertapenem; Ceftriaxone; Phenotype; Veterinary medicine; Medicine; Antibiotics; Minimum inhibitory concentration; Gene","authors":[{"name":"James A. Karlowsky","is_ca":true},{"name":"Sibylle Lob","is_ca":false},{"name":"C Andrew DeRyke","is_ca":false},{"name":"Fakhar Siddiqui","is_ca":false},{"name":"Katherine Young","is_ca":false},{"name":"Mary Motyl","is_ca":false},{"name":"Daniel F. Sahm","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009325153261946995,"gpt":0.2841881455054651,"spread":0.2748629922435181,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004144644,0.0001919087,0.0001853501,0.001261601,0.0001775844,0.000590283,0.0002560433,0.0003401689,0.001030036],"category_scores_gemma":[0.001102671,0.0001982609,0.0003943769,0.001202117,0.0002812478,0.0004546972,0.0005207145,0.0002853854,0.0001632496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005378298,"about_ca_system_score_gemma":0.0007223003,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02194528,"about_ca_topic_score_gemma":0.03118607,"domain_scores_codex":[0.999557,0.00005212744,0.00008253317,0.0001050419,0.00009482693,0.0001083919],"domain_scores_gemma":[0.9992453,0.00009293172,0.0003599776,0.00003116108,0.000158225,0.0001124948],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004779076,0.000009627019,0.9980001,0.00002383396,0.00001854033,0.00006440224,0.000116955,0.00003853846,0.000392069,0.00002137991,0.0001536486,0.001113213],"study_design_scores_gemma":[7.141637e-7,0.00002800808,0.9991854,0.00001229651,0.000007791505,0.0001567427,0.0003050211,0.00004850169,0.00008733977,0.000006366364,0.0001597473,0.000002073976],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956574,0.0002063404,0.00006465915,0.00004856909,0.000007088991,0.000005710372,0.003447778,0.000005877205,0.0005565959],"genre_scores_gemma":[0.9977191,0.0001478611,0.00006998453,0.00003412719,0.000003676339,0.000005387967,0.001755136,0.000001803191,0.0002629103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02194528,"threshold_uncertainty_score":0.04363507,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2781837947","doi":"10.1016/j.ijantimicag.2017.12.010","title":"Management of bloodstream infections by infection specialists: an international ESCMID cross-sectional survey","year":2018,"lang":"en","type":"article","venue":"International Journal of Antimicrobial Agents","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Hôpital du Saint-Sacrement","funders":"","keywords":"Antimicrobial stewardship; Medicine; Candida albicans; Pseudomonas aeruginosa; Guideline; Enterococcus faecalis; Internal medicine; Methicillin-resistant Staphylococcus aureus; Clinical microbiology; Antimicrobial; Infection control; Staphylococcus aureus; Family medicine; Intensive care medicine; Microbiology; Antibiotic resistance; Antibiotics; Pathology; Biology","authors":[{"name":"K. Diallo","is_ca":false},{"name":"Nathalie Thilly","is_ca":false},{"name":"Amandine Luc","is_ca":false},{"name":"Guillaume Béraud","is_ca":true},{"name":"Önder Ergönül","is_ca":false},{"name":"Maddalena Giannella","is_ca":false},{"name":"Diamantis P. Kofteridis","is_ca":false},{"name":"Tomislav Kostyanev","is_ca":false},{"name":"José Ramón Paño‐Pardo","is_ca":false},{"name":"Pilar Retamar","is_ca":false},{"name":"Winfried V. Kern","is_ca":false},{"name":"C. Pulcini","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03942399002173008,"gpt":0.3830160082627662,"spread":0.3435920182410361,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001029198,0.0003269326,0.0003339365,0.001001387,0.0004883063,0.0007662493,0.000377933,0.0007561492,0.001937894],"category_scores_gemma":[0.002027139,0.0004365572,0.0005088001,0.001571303,0.0002829126,0.001191608,0.0008544213,0.0005862089,0.0003822888],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005557974,"about_ca_system_score_gemma":0.0005223682,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01106938,"about_ca_topic_score_gemma":0.01527583,"domain_scores_codex":[0.9992433,0.0001775666,0.0001371509,0.0001300741,0.0001363504,0.0001755696],"domain_scores_gemma":[0.9983859,0.0001978394,0.0007502403,0.00007481757,0.0002421165,0.0003491119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000181749,0.00004457123,0.9993967,0.000005090395,0.00001577002,0.00002668586,0.00008270249,0.000007542592,0.00003820769,0.000004192048,0.00006749426,0.0002928115],"study_design_scores_gemma":[0.000002253202,0.00005844465,0.9990996,0.000007776109,0.000008594892,0.00009547731,0.0005743934,0.00002763841,0.00001109214,0.000003523705,0.0001091299,0.000002112289],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982035,0.000160141,0.00005909361,0.00006195562,0.000005844172,0.00001807696,0.0008499306,0.00000223686,0.000639206],"genre_scores_gemma":[0.9981149,0.0002461799,0.00009312089,0.0001603563,0.000008938527,0.00002666033,0.001092255,0.000002549996,0.0002551616],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01106938,"threshold_uncertainty_score":0.02200991,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2020483434","doi":"10.1016/j.ijantimicag.2004.03.008","title":"A review of clinical failures associated with macrolide-resistant Streptococcus pneumoniae","year":2004,"lang":"en","type":"review","venue":"International Journal of Antimicrobial Agents","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary; University of Manitoba; Health Sciences Centre","funders":"","keywords":"Medicine; Streptococcus pneumoniae; Sputum; Community-acquired pneumonia; Internal medicine; Pneumonia; Antibiotics; Pneumococcal pneumonia; Intensive care medicine; Microbiology; Tuberculosis; Pathology","authors":[{"name":"Marek Rzeszutek","is_ca":true},{"name":"Aleksandra Wierzbowski","is_ca":true},{"name":"Daryl J. Hoban","is_ca":true},{"name":"John Conly","is_ca":true},{"name":"William R. Bishai","is_ca":false},{"name":"George G. Zhanel","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0722476676671629,"gpt":0.4310406938006411,"spread":0.3587930261334782,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008906472,0.001020275,0.002488166,0.003923265,0.0003164287,0.0009342631,0.001113063,0.0009624583,0.001820907],"category_scores_gemma":[0.00210327,0.0003481201,0.0008616717,0.003853743,0.000439917,0.0012332,0.0005366911,0.0007803403,0.0007386566],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004467114,"about_ca_system_score_gemma":0.00109385,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00117469,"about_ca_topic_score_gemma":0.002963626,"domain_scores_codex":[0.99935,0.0001085479,0.0002329988,0.00008975217,0.0001864693,0.00003219257],"domain_scores_gemma":[0.9986564,0.0006389425,0.0003278039,0.00002755208,0.0002825073,0.000066679],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"systematic_review","study_design_scores_codex":[0.0001555832,0.00008419872,0.001532148,0.05429218,0.0003218409,0.00183112,0.0001133804,0.0002585209,0.001476321,0.0005477646,0.0253825,0.9140044],"study_design_scores_gemma":[0.00009454136,0.0006028349,0.0121483,0.03260563,0.00191332,0.02998883,0.0004119927,0.0002135616,0.001275145,0.0007829122,0.9198752,0.00008766198],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002295613,0.9991325,0.00008778882,0.0001040154,0.0001297565,0.000004517092,0.00001779347,0.000004592183,0.0002895521],"genre_scores_gemma":[0.001018145,0.9982194,0.0002271008,0.0001650337,0.0001774793,0.000005518105,0.0000291354,0.000001254561,0.0001570171],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.003923265,"threshold_uncertainty_score":0.006091475,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}