{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":14,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":14,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"49bc0cb6eeaa","filters":{"venue":"Journal of Microbiology Immunology and Infection"}},"results":[{"id":"W2806669511","doi":"10.1016/j.jmii.2018.04.005","title":"Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection during pregnancy: Report of two cases &amp; review of the literature","year":2018,"lang":"en","type":"review","venue":"Journal of Microbiology Immunology and Infection","topic":"COVID-19 Impact on Reproduction","field":"Medicine","cited_by":400,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Middle East respiratory syndrome coronavirus; Pregnancy; Middle East respiratory syndrome; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus; Coronavirus Infections; Medicine; Virology; 2019-20 coronavirus outbreak; Betacoronavirus; Respiratory system; Intensive care medicine; Obstetrics; Internal medicine; Biology; Outbreak; Infectious disease (medical specialty); Disease; Genetics","authors":[{"name":"Sarah H. Alfaraj","is_ca":true},{"name":"Jaffar A. Al‐Tawfiq","is_ca":false},{"name":"Ziad A. Memish","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08816732550439782,"gpt":0.3720639508814853,"spread":0.2838966253770875,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001065754,0.0003809943,0.002204284,0.0006112655,0.0001315236,0.000006625601,0.000118785,0.0007550197,0.00004582434],"category_scores_gemma":[0.001829183,0.0002472731,0.0008205079,0.0006002591,0.000642143,0.0001832484,0.0001206249,0.001287036,0.000006112681],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003109795,"about_ca_system_score_gemma":0.0006441399,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006547175,"about_ca_topic_score_gemma":0.00002331173,"domain_scores_codex":[0.9964306,0.0009241258,0.001960792,0.0003623812,0.00009465301,0.0002274232],"domain_scores_gemma":[0.993425,0.0001425798,0.004883308,0.0006973644,0.0008125198,0.00003925136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"case_report","study_design_scores_codex":[0.001059481,0.001405188,0.0283788,0.5508342,0.009207434,0.00167644,0.0006941659,0.000001156689,0.2413806,0.00002501573,0.001428367,0.1639092],"study_design_scores_gemma":[0.0006830697,0.001129658,0.004923577,0.241063,0.002337884,0.3800356,0.000002277877,6.299067e-9,0.001700885,0.000008471209,0.3679599,0.0001557315],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.2177919,0.779552,0.000005159761,0.00006989357,0.001879675,0.0006457025,0.00002285297,0.00001262499,0.00002026614],"genre_scores_gemma":[0.00419037,0.9951696,0.00002457563,0.0001034334,0.0002530665,0.00001388895,0.00004545784,0.00003134515,0.0001682667],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.3783591,"threshold_uncertainty_score":0.999998,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2223005053","doi":"10.1016/j.jmii.2015.06.011","title":"Emergence of Streptococcus suis serotype 9 infection in humans","year":2015,"lang":"en","type":"letter","venue":"Journal of Microbiology Immunology and Infection","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Ministry of Health, Labour and Welfare; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Streptococcus suis; Serotype; Microbiology; Virology; Biology; Virulence","authors":[{"name":"Anusak Kerdsin","is_ca":false},{"name":"Rujirat Hatrongjit","is_ca":false},{"name":"Marcelo Gottschalk","is_ca":true},{"name":"Dan Takeuchi","is_ca":false},{"name":"Shigeyuki Hamada","is_ca":false},{"name":"Yukihiro Akeda","is_ca":false},{"name":"Kazunori Oishi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02527155193585917,"gpt":0.2962592916230816,"spread":0.2709877396872225,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0003520428,0.0002710677,0.0008705361,0.0009040191,0.00005833581,0.000005447356,0.00005260706,0.001427856,0.0003217279],"category_scores_gemma":[0.0001405858,0.0002210137,0.000222667,0.0002718417,0.0003093202,0.0001223383,0.00004469318,0.001907683,0.0000162294],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001298313,"about_ca_system_score_gemma":0.0002186745,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006907432,"about_ca_topic_score_gemma":0.0001609807,"domain_scores_codex":[0.9983029,0.0002654821,0.0008840468,0.0002341102,0.00005879463,0.0002546964],"domain_scores_gemma":[0.998195,0.00008119633,0.0009474898,0.0002032421,0.0005368311,0.00003626053],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000232512,0.0002822278,0.8706345,0.0001113188,0.0008526565,0.0001246805,0.00007754317,0.000004352897,0.03058441,0.000006891502,0.09580225,0.001286666],"study_design_scores_gemma":[0.004527466,0.007437818,0.7935596,0.0006216791,0.0007741197,0.004450785,0.00003008384,0.000001867316,0.008547409,0.0003504586,0.1793947,0.000304064],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9881869,0.001740074,0.00003256796,0.007307819,0.001834491,0.0004127365,0.00001665888,0.00001547689,0.0004532622],"genre_scores_gemma":[0.9786419,0.008588759,0.0001222643,0.009766017,0.001564011,0.00005210315,0.0003280847,0.00006226432,0.0008745437],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08359245,"threshold_uncertainty_score":0.9998685,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4323349509","doi":"10.1016/j.jmii.2023.02.010","title":"Prophylactic intranasal administration of lipid nanoparticle formulated siRNAs reduce SARS-CoV-2 and RSV lung infection","year":2023,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Health and Medical Research Council; Institute of Infection and Immunity; University of Queensland","keywords":"Nasal administration; Small interfering RNA; In vivo; RNA interference; Medicine; Virus; Virology; Respiratory system; RNA; Immunology; Biology; Internal medicine","authors":[{"name":"Aroon Supramaniam","is_ca":false},{"name":"Yaman Tayyar","is_ca":false},{"name":"Daniel Clarke","is_ca":false},{"name":"Gabrielle Kelly","is_ca":false},{"name":"Dhruba Acharya","is_ca":false},{"name":"Kevin V. Morris","is_ca":false},{"name":"Nigel A.J. McMillan","is_ca":false},{"name":"Adi Idris","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01308725661380997,"gpt":0.2728263257517752,"spread":0.2597390691379653,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002800055,0.0001072991,0.0001877241,0.0001587437,0.00008037132,0.00001012294,0.00004194774,0.0002760261,0.000004038525],"category_scores_gemma":[0.00008323805,0.00009470779,0.0000592451,0.0001240102,0.0001806626,0.00002825861,0.00004185026,0.0001672189,0.000002705496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001347432,"about_ca_system_score_gemma":0.00006428899,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002749774,"about_ca_topic_score_gemma":0.00003325226,"domain_scores_codex":[0.9992004,0.0001227981,0.0003645282,0.0001429112,0.00002236029,0.0001470118],"domain_scores_gemma":[0.9993917,0.00001761685,0.0003123031,0.00008553131,0.0001750135,0.00001781799],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007585916,0.00005479203,0.01204398,0.00002990568,0.0001498037,0.000003538661,0.00005665684,0.00001145548,0.9847139,0.00001759071,0.0003140121,0.00184574],"study_design_scores_gemma":[0.0006748359,0.002900295,0.04607189,0.00002045468,0.00005029626,0.001172748,0.00002423637,0.00003893051,0.9479994,0.0000510762,0.0009098545,0.00008601311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985503,0.0005678417,0.0001588043,0.0001563597,0.0004331293,0.00009045435,0.000003343454,0.00000856691,0.00003119308],"genre_scores_gemma":[0.9979996,0.001758904,0.0000240362,0.00004858111,0.0001043552,0.000002657795,0.00002579796,0.000007194391,0.00002887596],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03671457,"threshold_uncertainty_score":0.3862072,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2946804588","doi":"10.1016/j.jmii.2019.04.009","title":"Occult HBV infection in patients with autoimmune hepatitis: A virological and clinical study","year":2019,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"Peking Union Medical College; National Health and Family Planning Commission of the People's Republic of China; Alberta Innovates - Health Solutions","keywords":"Medicine; HBsAg; Hepatitis B virus; Genotype; Genotyping; Autoimmune hepatitis; Virology; Serology; Cirrhosis; Hepatitis B; Internal medicine; Immunology; Gastroenterology; Hepatitis; Virus; Antibody; Biology; Gene","authors":[{"name":"Xinxin Chen","is_ca":false},{"name":"Kuanhui Xiang","is_ca":false},{"name":"Haiping Zhang","is_ca":false},{"name":"Xiangsha Kong","is_ca":false},{"name":"Chunyang Huang","is_ca":false},{"name":"Yanmin Liu","is_ca":false},{"name":"Jinli Lou","is_ca":false},{"name":"Zu‐Hua Gao","is_ca":true},{"name":"Huiping Yan","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01026311741780793,"gpt":0.2736153263409637,"spread":0.2633522089231558,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000610549,0.0001435919,0.0006247237,0.0002419802,0.00007039239,0.000006544583,0.00002631798,0.0003026539,0.00003521456],"category_scores_gemma":[0.0002089211,0.00009784184,0.00005094838,0.0001282847,0.000282251,0.0001398513,0.00006381622,0.0007181107,0.00001279375],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006761997,"about_ca_system_score_gemma":0.00004565299,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007316186,"about_ca_topic_score_gemma":0.001079605,"domain_scores_codex":[0.9985685,0.0003974343,0.0006232115,0.0001958452,0.00004032227,0.0001747052],"domain_scores_gemma":[0.9991829,0.0001272884,0.0003544176,0.0001013348,0.0002037426,0.00003036486],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001662842,0.001111936,0.9908873,0.00001200591,0.000493156,0.00001733328,0.0001537593,9.54336e-7,0.002907494,0.000008775748,0.00003052624,0.002713903],"study_design_scores_gemma":[0.007786722,0.020737,0.9700851,0.00007049301,0.0001413932,0.0005017487,0.00001643723,0.000002830701,0.00004931632,0.00001001671,0.0005095099,0.00008937292],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983821,0.0004448119,0.00001500703,0.0001129195,0.0005496686,0.000441097,0.000001936234,0.00001351402,0.00003897398],"genre_scores_gemma":[0.9975321,0.002176746,0.00004736118,0.0001613718,0.00003739875,0.000004282726,0.000006078521,0.000007541636,0.00002714112],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02080216,"threshold_uncertainty_score":0.3989874,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4294675789","doi":"10.1016/j.jmii.2022.08.016","title":"A brief on new waves of monkeypox and vaccines and antiviral drugs for monkeypox","year":2022,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"Ministry of Science and Technology, Taiwan","keywords":"Monkeypox; Smallpox; Virology; Outbreak; Smallpox vaccine; Orthopoxvirus; Vaccination; Poxviridae; Biology; Vaccinia","authors":[{"name":"Yuan‐Pin Hung","is_ca":false},{"name":"Ching‐Chi Lee","is_ca":false},{"name":"Jen‐Chieh Lee","is_ca":false},{"name":"Chun-Wei Chiu","is_ca":false},{"name":"Po‐Ren Hsueh","is_ca":false},{"name":"Wen‐Chien Ko","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01047934938379576,"gpt":0.251780648452296,"spread":0.2413012990685002,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005328302,0.0001810093,0.000508294,0.0004025806,0.0003744175,0.000008805167,0.0001116295,0.0002681096,0.00007848084],"category_scores_gemma":[0.0001622935,0.0001521258,0.000102313,0.0001011992,0.0004404454,0.0001289407,0.0001837537,0.0006365224,0.000002494676],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003121758,"about_ca_system_score_gemma":0.0001012244,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001705094,"about_ca_topic_score_gemma":0.00001599746,"domain_scores_codex":[0.9985878,0.0003888483,0.0004635918,0.0002258102,0.00002003982,0.0003139],"domain_scores_gemma":[0.9989352,0.0003910973,0.0004246536,0.0001145017,0.0001046604,0.00002985136],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003203753,0.000139779,0.01033331,0.00002764428,0.000578229,0.000003840904,0.000580808,0.000002384655,0.9430832,0.00074266,0.003350557,0.03795382],"study_design_scores_gemma":[0.0188044,0.02164855,0.1452893,0.0001056977,0.0003322461,0.008097149,0.00111201,0.000008683885,0.4868232,0.003899116,0.3133033,0.0005763149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984512,0.01364311,0.00007004706,0.0006654799,0.0007038959,0.0002131183,0.00006290418,0.00001104543,0.0001183601],"genre_scores_gemma":[0.9958198,0.003183492,0.00006904828,0.0001928733,0.00005277046,0.00000881328,0.00002777552,0.00001223899,0.0006331822],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.45626,"threshold_uncertainty_score":0.6203509,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4283775335","doi":"10.1016/j.jmii.2022.06.002","title":"End-of-treatment HBsAg, HBcrAg and HBV RNA predict the risk of off-treatment ALT flares in chronic hepatitis B patients","year":2022,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto General Hospital; Toronto Rehabilitation Institute; University of Toronto; University Health Network","funders":"Janssen Pharmaceuticals; Stichting voor Lever- en Maag-Darm Onderzoek; Fujirebio Europe; Gilead Sciences; Roche; Innogenetics; Bristol-Myers Squibb","keywords":"Medicine; HBsAg; Internal medicine; HBeAg; Hepatitis B; Chronic hepatitis; Gastroenterology; Multivariate analysis; Biomarker; Hepatitis B virus; Immunology; Virus","authors":[{"name":"Sylvia M. Brakenhoff","is_ca":false},{"name":"Robert J. de Knegt","is_ca":false},{"name":"Margo J. H. van Campenhout","is_ca":false},{"name":"Annemiek A. van der Eijk","is_ca":false},{"name":"Willem Pieter Brouwer","is_ca":false},{"name":"Florian van Bömmel","is_ca":false},{"name":"André Boonstra","is_ca":false},{"name":"Bettina E. Hansen","is_ca":true},{"name":"Thomas Berg","is_ca":false},{"name":"Harry L.A. Janssen","is_ca":true},{"name":"Robert A. de Man","is_ca":false},{"name":"Milan J. Sonneveld","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.00800185342536035,"gpt":0.2387686807712912,"spread":0.2307668273459308,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002822544,0.0001357324,0.0004926767,0.0002204446,0.0001717822,0.00000174193,0.00003973655,0.000100668,0.00006827484],"category_scores_gemma":[0.00009181748,0.00008601652,0.00009774793,0.00009455287,0.0003721145,0.00004850769,0.00008043097,0.0002654687,6.946801e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006432752,"about_ca_system_score_gemma":0.0001833444,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006044752,"about_ca_topic_score_gemma":0.004324437,"domain_scores_codex":[0.9987338,0.0004330883,0.0005134988,0.0001214774,0.00003962137,0.0001584714],"domain_scores_gemma":[0.9989782,0.0001953301,0.0005865382,0.0001132615,0.0001070861,0.00001959341],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004009052,0.0003230959,0.9165255,0.00001669245,0.001024595,0.000008918825,0.0008735884,0.00002767007,0.04816507,0.00001106096,0.00007866792,0.0325442],"study_design_scores_gemma":[0.003836429,0.02113479,0.9548922,0.00005533625,0.0003348409,0.0004864297,0.00005514512,0.00001477835,0.01207462,0.00004380327,0.007014636,0.00005702741],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9811822,0.01781084,0.000005288483,0.0001939426,0.0003898163,0.0002989584,0.00007568334,0.000004019088,0.00003928602],"genre_scores_gemma":[0.9358301,0.06400899,0.00002200099,0.00002698096,0.00003629056,0.00002168588,0.00001814461,0.00000676702,0.00002904209],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04619815,"threshold_uncertainty_score":0.9137898,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3134015108","doi":"10.1016/j.jmii.2021.02.005","title":"Global burden of tuberculosis attributable to cancer in 2019: Global, regional, and national estimates","year":2021,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Medicine; Attributable risk; Cancer; Tuberculosis; Environmental health; Confidence interval; Population; Lung cancer; Global health; Incidence (geometry); Relative risk; Demography; Public health; Internal medicine; Pathology","authors":[{"name":"Bing-Jie Shen","is_ca":false},{"name":"Wei-Cheng Lo","is_ca":false},{"name":"Hsien-Ho Lin","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02103381860686336,"gpt":0.3415684138516585,"spread":0.3205345952447952,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005074692,0.0001017284,0.0004994701,0.0001466137,0.00004661283,0.000004417583,0.00003818648,0.0002652646,0.00008219006],"category_scores_gemma":[0.0008750072,0.00008470589,0.00006600848,0.0002917247,0.0002256737,0.00008640531,0.00007039947,0.000228184,0.000003445057],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002280457,"about_ca_system_score_gemma":0.0003141348,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00104638,"about_ca_topic_score_gemma":0.0003413066,"domain_scores_codex":[0.9989352,0.0001932295,0.0004389978,0.0001619417,0.00004813697,0.0002224755],"domain_scores_gemma":[0.9989851,0.0001626797,0.0001663571,0.00006628778,0.0005479913,0.00007165936],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005962845,0.0001094181,0.7034703,0.00003569567,0.0004587008,0.00002342204,0.00003593313,0.0002182839,0.2843477,0.0003401789,0.007804186,0.002559819],"study_design_scores_gemma":[0.00156743,0.0008361879,0.9742436,0.0001697998,0.00007447164,0.009090521,0.00004701859,0.00003062597,0.005005723,0.001018136,0.007838867,0.00007762371],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9664792,0.01920689,0.00006290541,0.01380719,0.0002041918,0.00007809018,0.00005407411,0.000003925208,0.0001034935],"genre_scores_gemma":[0.9831146,0.01544785,0.0004800537,0.0008001207,0.00009228892,0.000004547089,0.00002604043,0.000003583447,0.00003091645],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.279342,"threshold_uncertainty_score":0.3454206,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3048891607","doi":"10.1016/j.jmii.2020.07.016","title":"Clinical impact of recreational drug use among people living with HIV in southern Taiwan","year":2020,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"HIV-related health complications and treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Kaohsiung Medical University","keywords":"Medicine; Recreational drug use; Recreational Drug; Drug; Pill; Odds ratio; Recreation; Internal medicine; Pharmacology","authors":[{"name":"Guanlin Chen","is_ca":false},{"name":"Shang‐Yi Lin","is_ca":false},{"name":"Hsiang-Yi Lo","is_ca":false},{"name":"Hsaing-Chun Wu","is_ca":false},{"name":"Ya-Mei Lin","is_ca":false},{"name":"Tun‐Chieh Chen","is_ca":false},{"name":"Chieh-Yu Sandy Chu","is_ca":true},{"name":"Wen-Chi Lee","is_ca":false},{"name":"Yen‐Hsu Chen","is_ca":false},{"name":"Po‐Liang Lu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01784233555325124,"gpt":0.3079638624880727,"spread":0.2901215269348215,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002630513,0.00007976562,0.0003529955,0.0001405518,0.00004724579,0.000002886617,0.0000254581,0.0001716124,0.00006241167],"category_scores_gemma":[0.0001810312,0.00005405868,0.00008980461,0.0001389204,0.0001503231,0.00009253114,0.00001521417,0.0004543562,0.000007704735],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000541971,"about_ca_system_score_gemma":0.0001621275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000269802,"about_ca_topic_score_gemma":0.0001107381,"domain_scores_codex":[0.9990674,0.000203683,0.0005034091,0.0001010611,0.0000195124,0.0001049257],"domain_scores_gemma":[0.9991004,0.0001901684,0.0004246201,0.00006447382,0.0001634002,0.00005693016],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005650981,0.0002271436,0.9896738,0.00001189862,0.0003383968,0.00000541809,0.001187076,0.00002554169,0.007297142,0.000007995962,0.0001144636,0.0005460524],"study_design_scores_gemma":[0.001906848,0.00199712,0.9947485,0.0002014244,0.00008893538,0.000718198,0.0001474766,0.00003144974,0.0000479807,0.000007945575,0.00006504093,0.00003911339],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998581,0.0003429732,0.00013539,0.0007308209,0.00004705637,0.0001138275,0.000008090764,0.000005663177,0.00003518223],"genre_scores_gemma":[0.9991711,0.0004015849,0.0002517892,0.00006634987,0.00003723469,0.000001890221,0.00001707246,0.000006052732,0.00004689929],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007249161,"threshold_uncertainty_score":0.2204449,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4380989649","doi":"10.1016/j.jmii.2023.06.002","title":"Implication of myddosome complex genetic variants in outcome severity of COVID-19 patients","year":2023,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Outcome (game theory); Medicine; Internal medicine; Virology; Mathematics; Outbreak; Disease","authors":[{"name":"Laura E. Martínez-Gómez","is_ca":false},{"name":"Carlos Martínez-Armenta","is_ca":false},{"name":"Daniel Medina-Luna","is_ca":true},{"name":"María Luisa Ordóñez-Sánchez","is_ca":false},{"name":"Tere Tusie-Luna","is_ca":false},{"name":"Silvestre Ortega‐Peña","is_ca":false},{"name":"Brígida Herrera-López","is_ca":false},{"name":"Carlos Suárez-Ahedo","is_ca":false},{"name":"Guadalupe Elizabeth Jiménez-Gutiérrez","is_ca":false},{"name":"Alberto Hidalgo‐Bravo","is_ca":false},{"name":"Paola Vázquez-Cárdenas","is_ca":false},{"name":"Rosa P. Vidal-Vázquez","is_ca":false},{"name":"Juan Pablo Ramírez-Hinojosa","is_ca":false},{"name":"Pilar Miyoko Martinez Matsumoto","is_ca":false},{"name":"Gilberto Vargas‐Alarcón","is_ca":false},{"name":"Rosalinda Posadas‐Sánchez","is_ca":false},{"name":"José Manuel Fragoso","is_ca":false},{"name":"Felipe de J. Martínez-Ruiz","is_ca":false},{"name":"Dulce M. Zayago-Angeles","is_ca":false},{"name":"Mónica Maribel Mata-Miranda","is_ca":false},{"name":"Gustavo Jesús Vázquez-Zapién","is_ca":false},{"name":"Adriana Martínez-Cuazitl","is_ca":false},{"name":"Javier Andrade-Alvarado","is_ca":false},{"name":"Julio Granados","is_ca":false},{"name":"Luis Ramos","is_ca":false},{"name":"María del Carmen Camacho-Rea","is_ca":false},{"name":"Yayoi Segura-Kato","is_ca":false},{"name":"José Manuel Rodrı́guez-Pérez","is_ca":false},{"name":"Roberto Coronado‐Zarco","is_ca":false},{"name":"Rafael Franco‐Cendejas","is_ca":false},{"name":"Luis Esaú López-Jácome","is_ca":false},{"name":"Jonathan J. Magaña","is_ca":false},{"name":"Marcela Vela‐Amieva","is_ca":false},{"name":"Carlos Pineda","is_ca":false},{"name":"Gabriela Angélica Martínez‐Nava","is_ca":false},{"name":"Alberto López-Reyes","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02108796495944969,"gpt":0.2818935616104574,"spread":0.2608055966510077,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008507883,0.0001472254,0.0005637779,0.0008102055,0.0000899121,0.000002616213,0.0001445749,0.0004841224,0.0001102384],"category_scores_gemma":[0.0005281155,0.0001320956,0.0001136263,0.0003706968,0.0004140679,0.0001471773,0.00008791414,0.0003508565,0.00003465095],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008104643,"about_ca_system_score_gemma":0.0001222799,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001295708,"about_ca_topic_score_gemma":0.00001683772,"domain_scores_codex":[0.997707,0.0006781029,0.00120376,0.0001555387,0.00002068898,0.0002348933],"domain_scores_gemma":[0.9981872,0.0002754371,0.001112337,0.0001729236,0.0002345857,0.00001753609],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006017943,0.0001416621,0.3057514,0.00004779948,0.0001550715,0.000001820798,0.0002727014,0.00002362686,0.6908615,0.00008415334,0.0002810109,0.001777466],"study_design_scores_gemma":[0.002804923,0.0007771416,0.9085423,0.00002566165,0.00004350043,0.0004225542,0.00006803863,0.000003196401,0.08417057,0.0003757277,0.00266786,0.00009852632],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978358,0.0007872987,0.0001577669,0.0002801061,0.0006804827,0.0001884052,0.0000221421,0.00001559339,0.00003247324],"genre_scores_gemma":[0.9986323,0.001055253,0.00004860835,0.00006505122,0.00001279672,0.000004696418,0.000121631,0.000008096394,0.00005155783],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6066909,"threshold_uncertainty_score":0.5386701,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2808073088","doi":"10.1016/j.jmii.2018.05.004","title":"Identification and characterization of a Streptococcus suis immunogenic ornithine carbamoytransferase involved in bacterial adherence","year":2018,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Henan Province University Innovation Talents Support Program; National Key Research and Development Program of China; China Scholarship Council; National Natural Science Foundation of China","keywords":"Streptococcus suis; Microbiology; Identification (biology); Ornithine; Computational biology; Virology; Biology; Amino acid; Biochemistry; Virulence; Arginine","authors":[{"name":"Yang Wang","is_ca":false},{"name":"Yi Li","is_ca":true},{"name":"Liyun Sun","is_ca":false},{"name":"Yichen Liu","is_ca":false},{"name":"Wen-Yan Wen","is_ca":false},{"name":"Xiaokang Li","is_ca":false},{"name":"Jing-Jing Mei","is_ca":false},{"name":"Ke Ding","is_ca":false},{"name":"Tingcai Wu","is_ca":false},{"name":"Daniel Grenier","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01231567752684024,"gpt":0.2614228365634648,"spread":0.2491071590366245,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002228491,0.0001057728,0.000312735,0.0003011345,0.00005984931,0.000007188731,0.00002476835,0.0002129931,0.00008958194],"category_scores_gemma":[0.00005869031,0.00008714363,0.00005222496,0.0001614668,0.0003288434,0.0001506409,0.00001723738,0.0001917471,0.000003113433],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004690525,"about_ca_system_score_gemma":0.00006099019,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009915933,"about_ca_topic_score_gemma":0.00008781693,"domain_scores_codex":[0.9990887,0.0001171845,0.000535813,0.0001285468,0.0000210242,0.0001087094],"domain_scores_gemma":[0.9992419,0.00003496385,0.0003395786,0.00009397795,0.000263798,0.00002575879],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004934259,0.0001378549,0.3662257,0.00001419582,0.0001388193,0.000002687662,0.0001221951,5.311399e-8,0.6304213,0.00001283784,0.000002035458,0.002428881],"study_design_scores_gemma":[0.002162654,0.002061004,0.6758317,0.00007551748,0.00009126908,0.000477468,0.00001975554,0.000003837921,0.3190852,0.00003199001,0.0001151701,0.00004441329],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986966,0.0002776192,0.0001556238,0.0000694312,0.0005198049,0.0002516287,0.00001173583,0.000006756079,0.00001081362],"genre_scores_gemma":[0.9988403,0.0009571746,0.00002451433,0.00001641985,0.00007969773,0.000008879039,0.00004437604,0.000005847791,0.00002273354],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3113361,"threshold_uncertainty_score":0.3553614,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3111518216","doi":"10.1016/j.jmii.2020.12.001","title":"Hepatitis C outbreak in a respiratory care ward associated with frequent injections: Taiwan, 2017","year":2020,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Hepatitis C virus research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Canadian Dairy Commission","keywords":"Outbreak; Medicine; Emergency medicine; Intensive care medicine; Respiratory system; Hepatitis C; Virology; Respiratory care; Pediatrics; Internal medicine","authors":[{"name":"Pei-Yuan Wu","is_ca":false},{"name":"Min-Nan Hung","is_ca":false},{"name":"Wei‐Lun Huang","is_ca":false},{"name":"Jyh‐Yuan Yang","is_ca":false},{"name":"Chia-ping Su","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02769494701546777,"gpt":0.2883038490221776,"spread":0.2606089020067098,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003006511,0.0001215956,0.0004112397,0.0003327905,0.00008957414,0.000008669389,0.00005230152,0.0003327281,0.00005226651],"category_scores_gemma":[0.0006396205,0.00009668691,0.00006442555,0.0002453868,0.0002673747,0.0001348564,0.00003800539,0.0009243896,0.00001407256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002775302,"about_ca_system_score_gemma":0.0002984942,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002458427,"about_ca_topic_score_gemma":0.001170071,"domain_scores_codex":[0.9987895,0.0003649619,0.0004184326,0.0001579106,0.00005372645,0.0002154886],"domain_scores_gemma":[0.9991063,0.00006377278,0.0002707906,0.00008701286,0.0004003132,0.00007174493],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004945909,0.00007727229,0.7930862,0.00002492078,0.0002957677,0.0001901141,0.0009692692,0.000005848013,0.2016523,0.00001518076,0.0005477337,0.002640851],"study_design_scores_gemma":[0.004113971,0.008573776,0.9508215,0.0002650687,0.0001001772,0.001193569,0.0002818559,0.000004804184,0.01330634,0.00001852211,0.02117975,0.0001407247],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947265,0.002996699,0.00005967951,0.001361418,0.0002002214,0.0001946838,0.00001269285,0.00001772434,0.0004303174],"genre_scores_gemma":[0.9973469,0.001600656,0.00004728797,0.0008614005,0.00008306535,0.000007433719,0.00001857101,0.00001177793,0.00002294353],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.188346,"threshold_uncertainty_score":0.4016064,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1994707040","doi":"10.1016/j.jmii.2015.02.660","title":"Bilateral adrenal histoplasmosis in a man with chronic alcoholism","year":2015,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Queen's University","funders":"","keywords":"Histoplasmosis; Medicine; Chronic alcoholism; Dermatology; Internal medicine","authors":[{"name":"Gulisa Turashvili","is_ca":true},{"name":"Kristopher S. Cunningham","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01614661028265985,"gpt":0.2484052225569668,"spread":0.232258612274307,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002326274,0.00009580899,0.0003066019,0.0002912746,0.00005396612,0.000004213164,0.00002012504,0.000160053,0.00002265901],"category_scores_gemma":[0.00003635071,0.00006401277,0.00004564499,0.0001072462,0.0002151088,0.00009298356,0.00002035291,0.0003976173,0.000006937738],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002098183,"about_ca_system_score_gemma":0.0001207896,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001290409,"about_ca_topic_score_gemma":0.0001826639,"domain_scores_codex":[0.9994091,0.00007432346,0.0002605726,0.00009123939,0.00002062585,0.0001441664],"domain_scores_gemma":[0.999575,0.00002519053,0.0001544005,0.00005862767,0.0001509408,0.0000358184],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00165316,0.0002441009,0.7217478,0.00002482403,0.0004914473,0.0001263595,0.0005004514,0.00003663688,0.2711939,0.00008298117,0.001690358,0.002207993],"study_design_scores_gemma":[0.008731842,0.01173328,0.8738701,0.0002125233,0.0002030757,0.05348719,0.00009879535,0.00001153522,0.01225296,0.0001111819,0.03911786,0.0001695992],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945922,0.003669356,0.00004154061,0.0008119775,0.00048988,0.00007181911,9.267632e-7,0.00000843258,0.000313883],"genre_scores_gemma":[0.9986499,0.0008363985,0.0001162238,0.0001363384,0.00009847809,0.000003195349,0.000003370434,0.000005429393,0.0001506686],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2589409,"threshold_uncertainty_score":0.2610365,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2049722954","doi":"10.1016/j.jmii.2015.02.548","title":"Evaluate the effect of educating primary caregiver the use of bundle care in prevention of catheter-associated urinary tract infections","year":2015,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Medicine; Incidence (geometry); Catheter; Quarter (Canadian coin); Bundle; Intensive care medicine; Urinary system; Emergency medicine; Pediatrics; Internal medicine; Surgery","authors":[{"name":"Shaw-Shin Wu","is_ca":false},{"name":"Su-Lan Liu","is_ca":false},{"name":"Yi-Jinn Jiang","is_ca":false},{"name":"Ching-Wen Wang","is_ca":false},{"name":"Yueh-Ing Ju","is_ca":false},{"name":"Huimei Huang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02758445575960902,"gpt":0.2941293755936314,"spread":0.2665449198340224,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001256557,0.0001222691,0.0004383808,0.0003545197,0.00007465599,0.000003588012,0.00006549852,0.0001789504,0.0000103338],"category_scores_gemma":[0.0005404291,0.00007314234,0.0001826634,0.0002694046,0.0003353258,0.0001734714,0.00005791904,0.0004818378,7.878438e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002250124,"about_ca_system_score_gemma":0.000172139,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003485906,"about_ca_topic_score_gemma":0.00005186269,"domain_scores_codex":[0.9980388,0.001057211,0.0006215355,0.00009687875,0.0000601217,0.000125497],"domain_scores_gemma":[0.9980369,0.0005388475,0.0008168399,0.0001863948,0.0004026696,0.00001833023],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001505547,0.01066623,0.8791633,0.0002265889,0.001300506,0.000006657095,0.004103317,0.000598011,0.09854183,0.00001811576,0.0002136614,0.003656293],"study_design_scores_gemma":[0.004121718,0.1180262,0.8435975,0.0005560133,0.001199574,0.004136166,0.0007541615,0.00000997763,0.02606201,0.00004118332,0.001390935,0.0001045425],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964939,0.002188561,0.00003203174,0.0001713879,0.0005581212,0.0004200274,0.000004232384,0.00000560428,0.00012612],"genre_scores_gemma":[0.9993966,0.0004555779,0.00002482123,0.00001798225,0.00002962414,0.00001151009,0.00001388865,0.000008064247,0.00004193763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.10736,"threshold_uncertainty_score":0.2982658,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4410699079","doi":"10.1016/j.jmii.2025.05.005","title":"Effects of COVID-19 vaccination and past SARS-CoV-2 infection on subsequent COVID-19 infection in people with HIV","year":2025,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Mayo Clinic; ICW Healthcare Ventures; Foundation for the National Institutes of Health","keywords":"Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; 2019-20 coronavirus outbreak; Vaccination; Medicine; Betacoronavirus; Pandemic; Pneumonia; Outbreak; Infectious disease (medical specialty); Disease","authors":[{"name":"Xueying Yang","is_ca":false},{"name":"Fanghui Shi","is_ca":false},{"name":"Shujie Chen","is_ca":false},{"name":"Ziang Liu","is_ca":false},{"name":"Yangjianchen Xu","is_ca":true},{"name":"Gregory A. Poland","is_ca":false},{"name":"Sharon Weissman","is_ca":false},{"name":"Bankole Olatosi","is_ca":false},{"name":"Jiajia Zhang","is_ca":false},{"name":"Xiaoming Li","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01551993423848875,"gpt":0.3223721495466811,"spread":0.3068522153081924,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009642954,0.0002365889,0.0006228543,0.001707065,0.0001805051,0.00001741773,0.00005374286,0.000509935,0.000005577156],"category_scores_gemma":[0.001060265,0.0001912086,0.0001003765,0.0006884098,0.0002618998,0.0002048207,0.00005738401,0.0008108818,0.000003840226],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007839951,"about_ca_system_score_gemma":0.0006814425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001676178,"about_ca_topic_score_gemma":0.001660304,"domain_scores_codex":[0.9981665,0.0005650538,0.0006006225,0.0003068605,0.00008328888,0.0002776751],"domain_scores_gemma":[0.9984859,0.0005741667,0.0004785398,0.0001548073,0.0002621869,0.00004438295],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002545709,0.0003207998,0.5179942,0.0004981649,0.0002258332,0.00002647055,0.0002355438,0.00001164391,0.4766028,0.0001659819,0.0002416704,0.001131169],"study_design_scores_gemma":[0.007815002,0.003728454,0.6538236,0.0001982979,0.0001695079,0.002181254,0.00002730951,0.00001962413,0.3175027,0.0003032897,0.01409804,0.0001328725],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930083,0.001084781,0.003224272,0.001476502,0.0004605757,0.0005779755,0.00000260144,0.00003237559,0.0001326405],"genre_scores_gemma":[0.9902318,0.00103571,0.00002468535,0.008577741,0.00006522265,0.0000299281,0.000009319262,0.00001296094,0.00001269462],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1591001,"threshold_uncertainty_score":0.7797261,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}