{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":381,"total_is_capped":false,"direct_labels_cover":1,"predictions_cover":381,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"36e21b14674c","filters":{"venue":"Molecular Cancer Research"}},"results":[{"id":"W2151879335","doi":"10.1158/1541-7786.mcr-08-0393","title":"Aldehyde Dehydrogenase 1 Is a Tumor Stem Cell-Associated Marker in Lung Cancer","year":2009,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":797,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute; Flight Attendant Medical Research Institute; American Cancer Society","keywords":"Cancer stem cell; Lung cancer; Aldehyde dehydrogenase; Cancer research; Cancer; Stem cell marker; Population; Stem cell; Pathology; Biology; Medicine; Oncology; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03807843488961515,"gpt":0.3883350861589024,"spread":0.3502566512692873,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001025032,0.0002705716,0.0005196168,0.0004877828,0.0001194901,0.00006070645,0.0002557856,0.0001329817,0.001631029],"category_scores_gemma":[0.00003674187,0.0002563894,0.0002167328,0.001627617,0.00009441657,0.00007362886,0.00009284046,0.000852045,0.00003415417],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001552569,"about_ca_system_score_gemma":0.001204418,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006332153,"about_ca_topic_score_gemma":0.001003286,"domain_scores_codex":[0.9960814,0.0002898035,0.0004030914,0.0007083394,0.001341807,0.001175536],"domain_scores_gemma":[0.9985051,0.00004780106,0.00008085218,0.0005796095,0.0003560279,0.0004305909],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001563662,0.001125666,0.02388521,0.00060357,0.0003675001,0.004923993,0.001480031,0.0001769858,0.867319,0.00007121899,0.0556309,0.0428522],"study_design_scores_gemma":[0.006786942,0.0004600577,0.01382664,0.001039474,0.0002176122,0.00002413225,0.0002628305,0.001571816,0.9341145,0.0001152,0.04098648,0.000594319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.958742,0.02955954,0.00003144224,0.005586704,0.0001138003,0.001116539,0.00009103661,0.00004754648,0.004711444],"genre_scores_gemma":[0.9889838,0.00216889,0.00007562672,0.003828604,0.0001040326,0.000428793,0.00001612335,0.00006490944,0.004329295],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06679543,"threshold_uncertainty_score":0.9999889,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2982411421","doi":"10.1158/1541-7786.mcr-19-0582","title":"Antibody–Drug Conjugates: A Comprehensive Review","year":2019,"lang":"en","type":"review","venue":"Molecular Cancer Research","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":770,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Sherbrooke","funders":"Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Antibody-drug conjugate; Drug; Payload (computing); Monoclonal antibody; Cytotoxic T cell; Immunotherapy; Computational biology; Cancer immunotherapy; Cancer research; Medicine; Pharmacology; Cancer; Antibody; Chemistry; Biology; Computer science; Immunology; In vitro; Biochemistry; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.354517806902707,"gpt":0.6034749384917816,"spread":0.2489571315890746,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.002904781,0.0009875,0.005468871,0.001235438,0.0002136582,0.0001585859,0.001544175,0.0005724538,0.003784147],"category_scores_gemma":[0.0006980264,0.000796497,0.001630912,0.003533878,0.0007303553,0.00008042498,0.001113652,0.005567105,0.00583615],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002122662,"about_ca_system_score_gemma":0.01067388,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001026199,"about_ca_topic_score_gemma":0.00001498144,"domain_scores_codex":[0.9869534,0.002700349,0.001395099,0.002002971,0.004723622,0.002224542],"domain_scores_gemma":[0.9924421,0.0007543925,0.0003224023,0.003151791,0.002413729,0.0009155821],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003630637,0.00007977643,0.00000687442,0.4735115,0.0006826464,0.001576349,0.00002435814,3.227889e-7,0.0001886329,0.00006441402,0.0506504,0.4731784],"study_design_scores_gemma":[0.0004591561,0.0001939705,0.000001376721,0.3022737,0.0009166052,0.0002095022,0.00001141986,0.00000374759,0.00005435497,0.00001394976,0.6954015,0.0004607162],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000005461467,0.9782403,0.00001747367,0.001852477,0.0004241292,0.01124028,0.0002646512,0.000110868,0.007844351],"genre_scores_gemma":[0.000002360233,0.9855567,0.0001020555,0.001689838,0.0004843862,0.002989158,0.0008456002,0.0004539089,0.007875947],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6447511,"threshold_uncertainty_score":0.9994486,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2123242217","doi":"10.1158/1541-7786.mcr-12-0307","title":"Cancer-Associated Fibroblasts Drive the Progression of Metastasis through both Paracrine and Mechanical Pressure on Cancer Tissue","year":2012,"lang":"en","type":"review","venue":"Molecular Cancer Research","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":516,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; University Health Network; Mount Sinai Hospital","funders":"Creations of Advanced Catalytic Transformation for the Sustainable Manufacturing at Low Energy, Low Environmental Load; National Institute of Environmental Health Sciences","keywords":"Cancer-Associated Fibroblasts; Metastasis; Cancer; Tumor microenvironment; Paracrine signalling; Cancer research; Cancer cell; Carcinogenesis; Biology; Stroma; Tumor progression; Immunology; Tumor cells; Receptor","retraction":null,"screen_n_in":null,"score":{"opus":0.1597587769204382,"gpt":0.5014731977563605,"spread":0.3417144208359223,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001500365,0.0007192182,0.002629634,0.0002853225,0.0002678785,0.00006190736,0.0005489437,0.0005150896,0.0009800295],"category_scores_gemma":[0.0001756962,0.0004379998,0.0005537986,0.001371376,0.0004934293,0.00009250781,0.0005592022,0.001954654,0.00001121773],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005136037,"about_ca_system_score_gemma":0.001778868,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008214786,"about_ca_topic_score_gemma":0.0009758293,"domain_scores_codex":[0.9932754,0.00131722,0.0008513391,0.001060849,0.002245468,0.001249712],"domain_scores_gemma":[0.9969672,0.0003682123,0.0005737576,0.0011089,0.0005714159,0.0004105131],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003095884,0.0003522926,0.00001314692,0.01834047,0.002843593,0.00008339484,0.0002241575,0.000009715984,0.001163115,0.0003944999,0.003262066,0.973004],"study_design_scores_gemma":[0.0008923043,0.0007365284,0.00001321255,0.0245355,0.005631739,0.00002123667,0.00003228818,0.000006173024,0.01235434,0.00002981724,0.9553672,0.0003796635],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000331258,0.9926177,0.0000270763,0.001088612,0.0003335018,0.003976714,0.001077642,0.00003780649,0.0005097149],"genre_scores_gemma":[0.004499181,0.9892167,0.0001758694,0.0001406559,0.000425864,0.003817413,0.0001040069,0.0002002623,0.001420069],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9726243,"threshold_uncertainty_score":0.9999332,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2135056923","doi":"10.1158/1541-7786.mcr-07-0267","title":"Transcriptome Profile of Human Colorectal Adenomas","year":2007,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":504,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Wnt signaling pathway; Carcinogenesis; Transcriptome; Colorectal cancer; Cancer research; Malignant transformation; Biology; Adenomatous polyposis coli; Neoplastic transformation; Intestinal mucosa; Mouse model of colorectal and intestinal cancer; Beta-catenin; Adenoma; Signal transduction; Cancer; Internal medicine; Cell biology; Medicine; Gene expression; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.0674734742023245,"gpt":0.4256775694447014,"spread":0.358204095242377,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001200638,0.0001488912,0.0003160716,0.0003939642,0.00009798309,0.00001243279,0.0002403738,0.0001581848,0.001547969],"category_scores_gemma":[0.0001020993,0.000140114,0.0001373021,0.0008482207,0.0004365383,0.00002709986,0.00007726511,0.0005827879,0.00002737965],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004050308,"about_ca_system_score_gemma":0.0004401684,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006239458,"about_ca_topic_score_gemma":0.0001906212,"domain_scores_codex":[0.9971321,0.0001029431,0.000340406,0.0003841353,0.001337884,0.0007025776],"domain_scores_gemma":[0.9987003,0.00006488081,0.000047734,0.0003745151,0.0005583306,0.0002542591],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000605748,0.0001344823,0.009651049,0.0001711312,0.00008086733,0.0001795743,0.0005064995,0.000002930579,0.9842935,0.0004252082,0.0008782068,0.003070793],"study_design_scores_gemma":[0.001089379,0.001373149,0.04191754,0.0001088472,0.00002965899,0.00001949315,0.0001758611,0.000009108133,0.9523135,0.000145745,0.002694491,0.0001232706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9737762,0.002306039,0.0001929874,0.0003319003,0.0001562669,0.0009690315,0.00001773195,0.00003689869,0.022213],"genre_scores_gemma":[0.9978613,0.00003499301,0.0005204407,0.00007966332,0.0001158011,0.0001496574,0.00001298315,0.00005244144,0.001172676],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03226649,"threshold_uncertainty_score":0.9993647,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2464284977","doi":"10.1158/1541-7786.mcr-16-0044","title":"Cell-free DNA (cfDNA): Clinical Significance and Utility in Cancer Shaped By Emerging Technologies","year":2016,"lang":"en","type":"review","venue":"Molecular Cancer Research","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":357,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; BC Cancer Agency; Simon Fraser University","funders":"Terry Fox Research Institute; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Terry Fox Foundation; Prostate Cancer Canada","keywords":"Cancer; Precision oncology; Genome instability; Computational biology; Liquid biopsy; Tumor progression; Cell-free fetal DNA; Circulating tumor cell; Tumor heterogeneity; Medicine; Sampling (signal processing); Bioinformatics; Biology; Oncology; Metastasis; Internal medicine; Computer science; DNA; Genetics; DNA damage","retraction":null,"screen_n_in":null,"score":{"opus":0.09897585218358453,"gpt":0.4544525636835561,"spread":0.3554767114999716,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001541386,0.0005530176,0.00122411,0.0002808887,0.0001404424,0.00008979347,0.001354464,0.001004415,0.00007072035],"category_scores_gemma":[0.0005716045,0.0004743265,0.0003509294,0.0005368479,0.0007802852,0.000006490626,0.00171206,0.001077324,0.00001209932],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002688487,"about_ca_system_score_gemma":0.001461765,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001101806,"about_ca_topic_score_gemma":0.0006609163,"domain_scores_codex":[0.9952635,0.0005794883,0.0009096249,0.001663936,0.0005296699,0.001053786],"domain_scores_gemma":[0.9975031,0.0002464989,0.0002677965,0.001553643,0.0002275156,0.0002014663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006133932,0.0001226217,0.0002187407,0.002559535,0.0001384372,0.00005155052,0.00001034373,7.355528e-7,0.00892089,0.00002418397,0.02292211,0.9649695],"study_design_scores_gemma":[0.0007361929,0.0001718339,0.00001088131,0.002075002,0.00007455447,0.00000380836,0.00002779347,0.00001164039,0.005153761,0.0002176516,0.9909392,0.0005776801],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002165766,0.9940026,0.0003647142,0.000546494,0.0002735817,0.001337739,0.0009207557,0.00003085711,0.0003574848],"genre_scores_gemma":[0.003942638,0.9932446,0.00008424067,0.00008298314,0.0002391042,0.001665449,0.0001080567,0.0001292393,0.0005036427],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9680171,"threshold_uncertainty_score":0.9997708,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2187627689","doi":"10.1158/1541-7786.257.2.5","title":"Human Tissue Kallikreins: Physiologic Roles and Applications in Cancer","year":2004,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Coagulation, Bradykinin, Polyphosphates, and Angioedema","field":"Medicine","cited_by":338,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Kallikrein; Proteases; Biology; Cancer research; Cancer; Genetics; Biochemistry; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.06516194017573922,"gpt":0.4344571546299748,"spread":0.3692952144542355,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002278477,0.0001280199,0.0002248719,0.0002139831,0.0001768161,0.00003093036,0.000120968,0.00009353749,0.0001466952],"category_scores_gemma":[0.00002696163,0.0001139406,0.00004113897,0.0005251194,0.0002120878,0.00005193364,0.00008226866,0.0002781209,0.00001340291],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002412979,"about_ca_system_score_gemma":0.0002518964,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007546912,"about_ca_topic_score_gemma":0.002091651,"domain_scores_codex":[0.9985675,0.0000562544,0.0001871392,0.0003896514,0.000394967,0.0004044448],"domain_scores_gemma":[0.9993618,0.00002224621,0.00003077059,0.0002850982,0.0001569578,0.0001431005],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000777074,0.0004037746,0.04013726,0.0003001473,0.00009043575,0.0001212353,0.001083635,0.001448987,0.901195,0.01732006,0.0003531977,0.03746849],"study_design_scores_gemma":[0.004829328,0.0006408017,0.5280406,0.0007768546,0.00007339906,0.00001519855,0.0006057562,0.0001169337,0.4020125,0.02810672,0.0342306,0.0005512362],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9722367,0.02341926,0.0001587414,0.002467558,0.00001906552,0.0008191856,0.00001124736,0.00004080541,0.0008274423],"genre_scores_gemma":[0.9967268,0.001237155,0.0000957329,0.0002787696,0.0001628796,0.0008088747,0.00002746032,0.00002739574,0.0006349082],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4991826,"threshold_uncertainty_score":0.9990619,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2797208961","doi":"10.1158/1541-7786.mcr-17-0784","title":"Exosomes Induce Fibroblast Differentiation into Cancer-Associated Fibroblasts through TGFβ Signaling","year":2018,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":324,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Quebec - Clinical Research Organization in Cancer","funders":"Fonds de Recherche du Québec - Santé; Government of Canada; Canadian Urological Association; Ferring; Canadian Institutes of Health Research; Canadian Urological Oncology Group","keywords":"Microvesicles; Cancer-Associated Fibroblasts; Stromal cell; Cancer research; Exosome; Cancer cell; Cell biology; Bladder cancer; SMAD; Cancer; Transforming growth factor; Metastasis; Tumor microenvironment; Fibroblast; Chemistry; Biology; microRNA; Cell culture","retraction":null,"screen_n_in":null,"score":{"opus":0.03944720025024814,"gpt":0.3791884721646274,"spread":0.3397412719143793,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004895214,0.0002976181,0.0002347597,0.000135482,0.000433679,0.0001280197,0.000642409,0.0003212206,0.0002964108],"category_scores_gemma":[0.0003622853,0.0003129652,0.0001603936,0.0006193686,0.0004952065,0.0000225475,0.0005269494,0.0003954299,0.00005227022],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002642347,"about_ca_system_score_gemma":0.0005011852,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001219029,"about_ca_topic_score_gemma":0.0007406754,"domain_scores_codex":[0.9965062,0.0005231949,0.0003452274,0.0008779551,0.0008803165,0.0008671373],"domain_scores_gemma":[0.9981195,0.00003680011,0.000132119,0.0007176484,0.000766556,0.0002274073],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001817349,0.0001375604,0.001478001,0.00007258185,0.0001826888,0.00001900491,0.0003741603,0.0001874113,0.9914992,0.0001194162,0.00290678,0.002841435],"study_design_scores_gemma":[0.0007405143,0.0003891697,0.001109035,0.000235292,0.00002661519,0.000001711159,0.000108349,0.0002241901,0.9904785,0.001080002,0.005246236,0.0003604269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904675,0.004999248,0.002653164,0.0005148493,0.0001991244,0.0004790437,0.00005459043,0.00004567415,0.0005867889],"genre_scores_gemma":[0.9967844,0.0003838619,0.0005287175,0.0002532342,0.0006458505,0.0003030231,0.0001779488,0.0001019219,0.0008209829],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006316943,"threshold_uncertainty_score":0.9999322,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2134473118","doi":"10.1158/1541-7786.315.2.6","title":"A Naturally Occurring Soluble Form of Vascular Endothelial Growth Factor Receptor 2 Detected in Mouse and Human Plasma","year":2004,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":209,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"National Cancer Institute","keywords":"Angiogenesis; Receptor tyrosine kinase; Vascular endothelial growth factor; Kinase insert domain receptor; Cancer research; Vasculogenesis; Receptor; Placental growth factor; Biology; Vascular endothelial growth factor A; Monoclonal antibody; Polyclonal antibodies; Tyrosine kinase; Cell biology; Chemistry; Endothelial stem cell; In vitro; Antibody; Biochemistry; VEGF receptors; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.02705784989401992,"gpt":0.328430020609115,"spread":0.3013721707150951,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002976501,0.0001727974,0.0002087454,0.0001805233,0.0001088695,0.00003098914,0.0002838512,0.0001953329,0.00003723238],"category_scores_gemma":[0.0001066907,0.0001670776,0.0001102898,0.0002670265,0.0001794489,0.000009373688,0.0002395585,0.0002406871,0.000002158189],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001199025,"about_ca_system_score_gemma":0.0002581702,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002272948,"about_ca_topic_score_gemma":0.001231071,"domain_scores_codex":[0.9982775,0.00009217548,0.0002487593,0.0004605236,0.0004211137,0.0004999096],"domain_scores_gemma":[0.9992485,0.000012999,0.00005640451,0.0003056291,0.0002639437,0.0001125471],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00012101,0.00005500687,0.006130813,0.00007674385,0.00007542116,0.000008455629,0.0001416883,0.00005061869,0.992387,0.0002633836,0.00004754014,0.0006423318],"study_design_scores_gemma":[0.001635632,0.0002881294,0.002168113,0.00006307211,0.000005981285,0.00000243037,0.00005504383,0.000009862453,0.9935475,0.0001340478,0.001895225,0.000194963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965697,0.00263227,0.0001565192,0.00005626581,0.00006030006,0.0003484772,0.00007080444,0.000009426592,0.00009623164],"genre_scores_gemma":[0.9985735,0.0006841658,0.0003005542,0.00005218897,0.00008733578,0.0001299454,0.00002556289,0.00004325864,0.0001034765],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0039627,"threshold_uncertainty_score":0.6813228,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2116786011","doi":"10.1158/1541-7786.mcr-09-0562","title":"The Pan-Bcl-2 Inhibitor (−)-Gossypol Triggers Autophagic Cell Death in Malignant Glioma","year":2010,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":187,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Institute of Genetics","keywords":"Autophagy; Programmed cell death; ATG5; Cancer research; Apoptosis; Glioma; Temozolomide; Gossypol; Necroptosis; Biology; Caspase; Chemistry; Cell biology; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.02064409682436578,"gpt":0.3288587471489718,"spread":0.308214650324606,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001143109,0.0001758662,0.0001366079,0.0001461933,0.0002928126,0.0001119021,0.0004246103,0.0002613896,0.00004489125],"category_scores_gemma":[0.00007465338,0.0001280456,0.0001137274,0.0003785243,0.0001631944,0.000005060889,0.0002136655,0.0004940791,0.00002233121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005507817,"about_ca_system_score_gemma":0.0003234275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000560882,"about_ca_topic_score_gemma":0.0009218143,"domain_scores_codex":[0.9977844,0.0002217286,0.0002566724,0.0005176855,0.0005440992,0.0006754272],"domain_scores_gemma":[0.9989657,0.00003197957,0.0000544331,0.0006335623,0.0001831088,0.0001312557],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009764778,0.00006071254,0.0002945886,0.00001548559,0.00001443848,0.00007165078,0.00003622174,0.00004792057,0.9888719,0.0008596124,0.0004821358,0.009147653],"study_design_scores_gemma":[0.0007453751,0.000155348,0.001331995,0.0000152852,0.000005581756,0.00001159163,0.00005005475,0.0003069738,0.94626,0.0005441312,0.05039669,0.0001769657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928071,0.004084457,0.0002373867,0.0006008631,0.0004285267,0.0005468192,0.000007827955,0.00001196659,0.001275078],"genre_scores_gemma":[0.9958977,0.000923313,0.0001780685,0.00006048085,0.0003001408,0.0002354346,0.00002668617,0.00004387371,0.002334296],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04991455,"threshold_uncertainty_score":0.5221548,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2140777372","doi":"10.1158/1541-7786.mcr-07-2001","title":"BRAF Silencing by Short Hairpin RNA or Chemical Blockade by PLX4032 Leads to Different Responses in Melanoma and Thyroid Carcinoma Cells","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Melanoma and MAPK Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":187,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Concordia University; McGill University","funders":"Plexxikon","keywords":"Cancer research; Gene silencing; Thyroid cancer; Small hairpin RNA; Melanoma; Thyroid carcinoma; Cancer; Biology; Anaplastic thyroid cancer; Gene knockdown; Cell growth; RNA interference; Cell culture; Medicine; Thyroid; Internal medicine; Endocrinology; RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.03724670571200836,"gpt":0.3183625756842799,"spread":0.2811158699722716,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003644081,0.0002928797,0.0003317102,0.0001699823,0.0001510823,0.00004263215,0.0004196916,0.0002664909,0.00002961896],"category_scores_gemma":[0.000148222,0.0002580913,0.00007540284,0.0002817863,0.0002216363,0.000006288669,0.0004491499,0.0004073582,0.000008699611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001298795,"about_ca_system_score_gemma":0.0002859265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006583085,"about_ca_topic_score_gemma":0.0002337229,"domain_scores_codex":[0.997078,0.0003212143,0.0003071533,0.0008652134,0.0005831079,0.0008453153],"domain_scores_gemma":[0.9988989,0.00005232419,0.00002860871,0.0005300154,0.0001048733,0.0003852679],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008798169,0.0001944564,0.007735648,0.00003662585,0.00002374763,0.0002800673,0.0001859774,0.000003774237,0.9717004,0.000003687754,0.01821259,0.0007432513],"study_design_scores_gemma":[0.001304804,0.0008222366,0.001165056,0.00003554052,0.000006805458,0.00004860023,0.00006727529,0.00004638678,0.9916832,0.000004830696,0.004487512,0.000327751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9926742,0.0056512,0.000190758,0.0004356015,0.0000624953,0.0005333826,0.0001118647,0.00001447521,0.0003259734],"genre_scores_gemma":[0.9963213,0.0007657958,0.0001084449,0.0002661659,0.0001110842,0.0002747148,0.00007715304,0.00005933088,0.002015973],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01998284,"threshold_uncertainty_score":0.9999871,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2119242698","doi":"10.1158/1541-7786.mcr-08-0146","title":"Neural Stem Cell Tropism to Glioma: Critical Role of Tumor Hypoxia","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":176,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia Hospital","funders":"National Cancer Institute; National Science Council","keywords":"Glioma; Urokinase receptor; Cancer research; Neural stem cell; Hypoxia (environmental); Biology; Stromal cell; CXCR4; Plasminogen activator; Receptor; Stem cell; Chemistry; Cell biology; Chemokine; Endocrinology","retraction":null,"screen_n_in":null,"score":{"opus":0.03098128425307092,"gpt":0.3366856721233071,"spread":0.3057043878702362,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000315713,0.0002132758,0.0003025412,0.0002119321,0.0001736461,0.00002463064,0.0005077898,0.0001354823,0.00007010063],"category_scores_gemma":[0.00009827653,0.000216511,0.0001885785,0.0004915185,0.0003475672,0.000006718646,0.0003534596,0.0003005269,0.00002994244],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004892135,"about_ca_system_score_gemma":0.0004439457,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005953927,"about_ca_topic_score_gemma":0.00005701599,"domain_scores_codex":[0.9972486,0.0002580174,0.000302933,0.0006292767,0.0007693926,0.0007917706],"domain_scores_gemma":[0.9983563,0.0000288137,0.00004141931,0.0006861814,0.0005090124,0.0003782152],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002503095,0.0001158824,0.0001998346,0.00004972163,0.00002681564,0.00006009915,0.0001438042,0.00009319557,0.9902962,0.0001716298,0.005462724,0.003129773],"study_design_scores_gemma":[0.0005914907,0.0003665289,0.001113254,0.0000152178,0.00001416309,0.0000600279,0.0001258147,0.00004252619,0.8879118,0.00005628396,0.1094825,0.0002203848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9753805,0.02144927,0.0002939568,0.0003873951,0.000442035,0.0003953908,0.00006708223,0.00001443931,0.001569904],"genre_scores_gemma":[0.9969468,0.0004783468,0.0003583746,0.0002983622,0.0008109646,0.0002097215,0.00001313931,0.00006160685,0.0008227255],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1040198,"threshold_uncertainty_score":0.8829063,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2131620064","doi":"10.1158/1541-7786.mcr-05-0074","title":"Fractionated Low-Dose Radiation Exposure Leads to Accumulation of DNA Damage and Profound Alterations in DNA and Histone Methylation in the Murine Thymus","year":2005,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":176,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Lethbridge","funders":"University of Lethbridge","keywords":"DNA methylation; Cancer epigenetics; Biology; Histone; Epigenetics; Histone methylation; Carcinogenesis; Cancer research; Molecular biology; Histone methyltransferase; Methyltransferase; DNA damage; DNA methyltransferase; Methylation; DNA; Cancer; Gene expression; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.05806782239609194,"gpt":0.4270024348590914,"spread":0.3689346124629995,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001024282,0.00009236034,0.0001017329,0.0002591441,0.00007712276,0.00003872066,0.00008824927,0.0001050599,0.000009140062],"category_scores_gemma":[0.0001824265,0.0000856522,0.00001865272,0.0004020206,0.00005934008,0.00001979005,0.0000565597,0.0001573209,8.984335e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007381913,"about_ca_system_score_gemma":0.00008338154,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003925941,"about_ca_topic_score_gemma":0.001615053,"domain_scores_codex":[0.9986335,0.0003550442,0.0002482585,0.000284121,0.000296643,0.0001824039],"domain_scores_gemma":[0.9994745,0.00004939467,0.00005625551,0.0002163859,0.0001583444,0.00004514828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001009839,0.0000613068,0.005700734,0.00002072768,0.000007762531,0.000001686085,0.0005599816,0.005940224,0.967246,0.0001053804,0.00001688345,0.02023831],"study_design_scores_gemma":[0.0008317914,0.0002091906,0.212028,0.00002461737,0.000006261354,8.185884e-7,0.00008038033,0.002415176,0.7817647,0.0001926104,0.002334721,0.000111748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924383,0.004086021,0.0009721248,0.001711471,0.0000264758,0.0006173736,0.000008558047,0.00000266661,0.0001370036],"genre_scores_gemma":[0.9984844,0.000705347,0.0003100757,0.00009993267,0.00007746511,0.0001371308,0.0001064512,0.00001357486,0.00006567828],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2063273,"threshold_uncertainty_score":0.3492796,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2099842692","doi":"10.1158/1541-7786.mcr-07-0119","title":"Osteoactivin Promotes Breast Cancer Metastasis to Bone","year":2007,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Bone health and treatments","field":"Medicine","cited_by":164,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Immunovaccine (Canada)","funders":"Barbara Ann Karmanos Cancer Institute; McGill University","keywords":"Cancer research; Metastasis; Breast cancer; Cancer; Bone metastasis; Estrogen receptor; Cancer cell; Biology; Medicine; Internal medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.07324395498664367,"gpt":0.4598174808776312,"spread":0.3865735258909876,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001133992,0.000173173,0.0003225542,0.000435284,0.0001723867,0.00002977621,0.0001100306,0.00009449539,0.000700084],"category_scores_gemma":[0.00008233237,0.0001448317,0.00009206497,0.001104172,0.00008370026,0.00005365374,0.0001033365,0.0004627696,0.0001739076],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007514665,"about_ca_system_score_gemma":0.0007572313,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0157659,"about_ca_topic_score_gemma":0.00255343,"domain_scores_codex":[0.9969378,0.0001142437,0.0002490894,0.0004849723,0.001118907,0.001095025],"domain_scores_gemma":[0.998112,0.00006051144,0.00003354381,0.0004518732,0.0004618462,0.000880214],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003667788,0.0009390542,0.05407666,0.0004848582,0.0005845353,0.003409208,0.0006499815,0.000008774493,0.2768965,0.0002087317,0.00577935,0.6532946],"study_design_scores_gemma":[0.004966225,0.001237838,0.2678786,0.00065181,0.0002261457,0.0003618532,0.0002171052,0.00002558577,0.6781525,0.0001518441,0.04568563,0.0004448948],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.970046,0.003864933,0.0002714961,0.02136833,0.000114033,0.001585779,0.0001077814,0.00005585756,0.002585797],"genre_scores_gemma":[0.9948809,0.000164671,0.0007398555,0.001281072,0.0001048541,0.0005309618,0.00001229718,0.00005729955,0.002228131],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6528497,"threshold_uncertainty_score":0.9907882,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2127136945","doi":"10.1158/1541-7786.mcr-10-0264","title":"Personalized Medicine: Marking a New Epoch in Cancer Patient Management","year":2010,"lang":"en","type":"review","venue":"Molecular Cancer Research","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":163,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Precision medicine; Personalized medicine; Disease; Medicine; Cancer; Health care; Biomarker discovery; Standardization; Oncology; Internal medicine; Bioinformatics; Intensive care medicine; Computer science; Biology; Gene; Pathology; Proteomics","retraction":null,"screen_n_in":null,"score":{"opus":0.08140394844953625,"gpt":0.4402091310216631,"spread":0.3588051825721268,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007160148,0.000527709,0.0010116,0.0005361292,0.0001140841,0.00007628332,0.0008110505,0.0005901175,0.0004202781],"category_scores_gemma":[0.0001563137,0.0004770751,0.0003524115,0.0007714204,0.0002775276,0.000002907357,0.0007664667,0.001171226,0.00002213272],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004849506,"about_ca_system_score_gemma":0.001768361,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003772052,"about_ca_topic_score_gemma":0.001972934,"domain_scores_codex":[0.9959867,0.0003348749,0.0006586562,0.001191693,0.0008685514,0.0009595047],"domain_scores_gemma":[0.9982279,0.00006668193,0.0002012479,0.000977547,0.0001915418,0.0003350852],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00005754075,0.00005675221,0.00001370142,0.002852635,0.0002415194,0.000241631,0.00008263628,0.00001564309,0.001284936,0.0004269478,0.01771185,0.9770142],"study_design_scores_gemma":[0.000736945,0.0001634459,0.000004157005,0.005635491,0.0001772133,0.0000138775,0.00004150873,0.00000360806,0.0003416195,0.0001590873,0.9922397,0.0004834188],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000549017,0.9931853,0.00009664799,0.0003672445,0.0006443656,0.001691686,0.0000917515,0.000009243745,0.003364789],"genre_scores_gemma":[0.0001068662,0.9940665,0.0002407941,0.0002944995,0.0008224884,0.001830118,0.0002405662,0.0001596502,0.002238505],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9765308,"threshold_uncertainty_score":0.9997681,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2752017840","doi":"10.1158/1541-7786.mcr-17-0320","title":"The MiTF/TFE Family of Transcription Factors: Master Regulators of Organelle Signaling, Metabolism, and Stress Adaptation","year":2017,"lang":"en","type":"review","venue":"Molecular Cancer Research","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":159,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Dalhousie University","funders":"","keywords":"Microphthalmia-associated transcription factor; Folliculin; Transcription factor; Wnt signaling pathway; Biology; Carcinogenesis; Cancer research; TFEB; Ribosome biogenesis; Cell biology; Signal transduction; Epigenetics; Proteostasis; Cancer; Genetics; Gene; RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.2332497825560653,"gpt":0.4180692608570989,"spread":0.1848194783010336,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001037732,0.000339806,0.0009146419,0.0001722359,0.0003012017,0.00006329334,0.0006317326,0.0003580464,0.000005935472],"category_scores_gemma":[0.0002616151,0.0002385807,0.0003458996,0.0001920202,0.0006742098,0.000006206703,0.0002457165,0.0003542395,0.000001008664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003558306,"about_ca_system_score_gemma":0.0005395353,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003076209,"about_ca_topic_score_gemma":0.00008874435,"domain_scores_codex":[0.9970715,0.0006844191,0.0006059906,0.0005501528,0.0006749543,0.0004129826],"domain_scores_gemma":[0.9979708,0.00008926349,0.0004287084,0.0008320955,0.0005903547,0.00008884105],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001647754,0.00009706054,0.0000856981,0.013708,0.002053124,0.00001251003,0.001035384,0.00006747086,0.5172243,0.0001551212,0.0003507412,0.4650458],"study_design_scores_gemma":[0.0003499978,0.0002505641,0.00008018921,0.003646125,0.0004495059,0.000001999343,0.0006198497,0.000007117694,0.2109411,0.00003727428,0.7832585,0.000357743],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.04082328,0.9576451,0.0002289385,0.00001994567,0.0001422283,0.0007278313,0.0003250641,0.0000045895,0.0000830761],"genre_scores_gemma":[0.07388927,0.9253396,0.00005238736,0.000003694715,0.0001118701,0.0001275307,0.0001349672,0.00007324832,0.0002674794],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7829078,"threshold_uncertainty_score":0.9729037,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2135647551","doi":"10.1158/1541-7786.mcr-12-0117","title":"State of the Science: An Update on Renal Cell Carcinoma","year":2012,"lang":"en","type":"review","venue":"Molecular Cancer Research","topic":"Renal cell carcinoma treatment","field":"Medicine","cited_by":153,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; University of Toronto","funders":"National Cancer Institute","keywords":"Proteostasis; Clear cell renal cell carcinoma; Context (archaeology); Epigenetics; Biology; Cancer research; Cancer; Renal cell carcinoma; Disease; Bioinformatics; Computational biology; Medicine; Oncology; Genetics; Internal medicine; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.1603967325134696,"gpt":0.4400283415906798,"spread":0.2796316090772101,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002108659,0.0004231578,0.001149901,0.0007615521,0.0002470849,0.00005552184,0.001090812,0.0001547898,0.0001776251],"category_scores_gemma":[0.0000525171,0.0002414282,0.0005255985,0.002093762,0.001072178,0.0000719682,0.0005132909,0.001388938,0.0001233046],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00157329,"about_ca_system_score_gemma":0.00496781,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004944345,"about_ca_topic_score_gemma":0.00001830653,"domain_scores_codex":[0.9934946,0.0008371279,0.0005267421,0.0008119933,0.003213104,0.001116419],"domain_scores_gemma":[0.9964114,0.00006882143,0.0002377892,0.0021346,0.0006018847,0.0005454902],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001394524,0.000492848,0.00006850301,0.01266888,0.0001347797,0.0004008386,0.0001664315,0.000008866894,0.008769526,0.0001180245,0.0003049978,0.9767268],"study_design_scores_gemma":[0.0008805473,0.001300999,0.0006576232,0.006498435,0.001189075,0.00008991994,0.00001443667,0.00000611076,0.1871317,0.00005087982,0.8017479,0.0004323076],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.06289819,0.9303926,0.00000197291,0.00008817079,0.0001762088,0.002148082,0.00007690418,0.00001250544,0.004205383],"genre_scores_gemma":[0.1391718,0.8585076,0.0000532022,0.00004607965,0.0001650704,0.0004328662,0.00004129739,0.0001206543,0.00146145],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9762945,"threshold_uncertainty_score":0.9845158,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2109303819","doi":"10.1158/1541-7786.mcr-11-0007","title":"MicroRNA-138 Modulates DNA Damage Response by Repressing Histone H2AX Expression","year":2011,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":152,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; Adobe Systems; Howard Hughes Medical Institute","keywords":"DNA damage; Histone; microRNA; DNA repair; Genome instability; Biology; Cancer research; Cisplatin; Camptothecin; Cancer epigenetics; Molecular biology; DNA; Cell biology; Histone methyltransferase; Genetics; Gene; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.05672791886329206,"gpt":0.3701325359598922,"spread":0.3134046170966001,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009110741,0.0002220728,0.0001894359,0.0001524811,0.0002266045,0.00006086128,0.0006074048,0.0002394338,0.000284099],"category_scores_gemma":[0.0001743672,0.000214425,0.0001235923,0.0002104887,0.000282738,0.00001327436,0.0004675164,0.0003340868,0.0000534007],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008401906,"about_ca_system_score_gemma":0.0001967859,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005450886,"about_ca_topic_score_gemma":0.0000251648,"domain_scores_codex":[0.997272,0.0005990781,0.0002652332,0.0007757021,0.0004458428,0.0006421249],"domain_scores_gemma":[0.9984632,0.00002056957,0.00007443087,0.0009362196,0.0003163994,0.0001892181],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001736401,0.00009032555,0.0003256242,0.00001592309,0.00004375756,0.00007838251,0.0002643138,0.00001130109,0.9650559,0.000004897704,0.03101139,0.001361724],"study_design_scores_gemma":[0.0004319869,0.0003451327,0.0007110386,0.00008436517,0.000008351952,0.000008499674,0.0001031622,0.00002606084,0.9712063,0.00007973676,0.02674152,0.0002538181],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901474,0.00654443,0.0009313899,0.00026943,0.0001245359,0.0002518098,0.0000433419,0.00002171519,0.001665933],"genre_scores_gemma":[0.9937854,0.0004140752,0.0005115619,0.0002837899,0.00007752188,0.0001240672,0.00007346729,0.00006001111,0.004670107],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006150369,"threshold_uncertainty_score":0.8743996,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2120622571","doi":"10.1158/1541-7786.mcr-10-0457","title":"Notch1 Inhibition Alters the CD44hi/CD24lo Population and Reduces the Formation of Brain Metastases from Breast Cancer","year":2011,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":146,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; Robarts Research Institute; National Institutes of Health","keywords":"CD44; Medicine; Cancer research; Cancer; Phenotype; Breast cancer; Matrigel; Cancer stem cell; Metastasis; Population; Gene knockdown; Cancer cell; Cell; Pathology; Internal medicine; Biology; Cell culture; Angiogenesis; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.0895629571686109,"gpt":0.3774363293595678,"spread":0.2878733721909569,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000886558,0.0001198442,0.0002015213,0.0001274593,0.0001850028,0.00003468361,0.0001103366,0.00004867928,0.000382739],"category_scores_gemma":[0.00005806868,0.00007000518,0.00008336628,0.0004163439,0.0002508307,0.0001487191,0.00008663146,0.0002656973,0.000003040121],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001370325,"about_ca_system_score_gemma":0.0001233739,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04891932,"about_ca_topic_score_gemma":0.0009499213,"domain_scores_codex":[0.9982613,0.0002880763,0.0002580831,0.0002440709,0.0006742645,0.0002742478],"domain_scores_gemma":[0.9991516,0.0000947499,0.0001119198,0.0002882712,0.0002668293,0.0000866515],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009665976,0.0001044725,0.001490762,0.0001770034,0.0002347081,0.00002794472,0.0041547,0.00004478164,0.8524702,0.0004641038,0.004049269,0.1358154],"study_design_scores_gemma":[0.001209196,0.0001416737,0.03350623,0.0003581756,0.0002457707,0.00003761564,0.001539832,0.0002357319,0.9594686,0.0008284396,0.002287721,0.000141044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984202,0.005460544,0.0002410687,0.008612617,0.00007941999,0.0006807224,0.0003674384,0.00001223375,0.0003439588],"genre_scores_gemma":[0.9974235,0.001366746,0.0001508522,0.000551681,0.0001210004,0.0002290014,0.00006931396,0.00002164122,0.00006620998],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1356744,"threshold_uncertainty_score":0.957414,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1986247091","doi":"10.1158/1541-7786.mcr-14-0536","title":"mTOR/MYC Axis Regulates O-GlcNAc Transferase Expression and O-GlcNAcylation in Breast Cancer","year":2015,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":146,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"National Cancer Institute","keywords":"PI3K/AKT/mTOR pathway; Carcinogenesis; Cancer research; Transferase; Protein kinase B; Biology; Glutamine; Chemistry; Cancer; Cell biology; Molecular biology; Signal transduction; Enzyme; Biochemistry; Amino acid; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.04136380636154376,"gpt":0.3680830664362955,"spread":0.3267192600747517,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001027785,0.0001852301,0.0001853699,0.000301959,0.0001237735,0.00008824734,0.0002563963,0.0002294984,0.0001404102],"category_scores_gemma":[0.0001149091,0.0001813971,0.00005513563,0.0005186144,0.0002032096,0.00002102601,0.0002028011,0.000376263,0.00001277878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001532627,"about_ca_system_score_gemma":0.0004643275,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002400785,"about_ca_topic_score_gemma":0.0007715329,"domain_scores_codex":[0.9972399,0.0004136009,0.0002552959,0.0006433392,0.0008398845,0.0006079169],"domain_scores_gemma":[0.9986661,0.00001663917,0.00003141333,0.0004284729,0.0004996574,0.000357699],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000654827,0.00007441562,0.01007671,0.00004919671,0.00002010932,0.00003483346,0.0002038145,0.0005201534,0.9728264,0.00006392474,0.001711586,0.01376401],"study_design_scores_gemma":[0.002485404,0.0002067454,0.01870853,0.0001368241,0.000005518343,0.00002028124,0.0002040019,0.0008343335,0.9600462,0.0003396929,0.01668789,0.0003245933],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901732,0.005512267,0.0002889448,0.002659855,0.00007005886,0.0006412238,0.00006281074,0.0000151596,0.0005764853],"genre_scores_gemma":[0.9970677,0.001309754,0.0001639528,0.0001208079,0.0001494585,0.0004374997,0.00006871457,0.00004506835,0.0006370459],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0149763,"threshold_uncertainty_score":0.7397157,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2127766722","doi":"10.1158/1541-7786.mcr-06-0095","title":"Baseline Gene Expression Predicts Sensitivity to Gefitinib in Non–Small Cell Lung Cancer Cell Lines","year":2006,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":140,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute","keywords":"Gefitinib; Lung cancer; Cancer research; Epidermal growth factor receptor; Microarray; Biology; Gene expression profiling; Gene expression; Gene; Microarray analysis techniques; Cancer; Oncology; Medicine; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02592032282648933,"gpt":0.3855937390332659,"spread":0.3596734162067766,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006741912,0.0002405769,0.0003388889,0.0002936625,0.0001455945,0.00004598378,0.0001157231,0.0001361175,0.0002537459],"category_scores_gemma":[0.00004821358,0.0002112329,0.00009619988,0.0006953061,0.0000550512,0.0000743819,0.0001459572,0.0003946625,0.0000224396],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001017804,"about_ca_system_score_gemma":0.0008515044,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.04094923,"about_ca_topic_score_gemma":0.008015593,"domain_scores_codex":[0.9971796,0.0002562854,0.0003312219,0.0006703575,0.000792495,0.0007700104],"domain_scores_gemma":[0.9985431,0.0001054743,0.00005359065,0.0004826377,0.0005049265,0.000310229],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002716537,0.0005740009,0.02626738,0.0003447059,0.00003245357,0.001082284,0.0004098929,0.005410364,0.9547139,0.000005823775,0.00869999,0.002187496],"study_design_scores_gemma":[0.003245188,0.0001739228,0.01858263,0.0005421003,0.0001063813,0.000006852117,0.0001062786,0.003604887,0.9696297,0.00001531822,0.003751036,0.0002356886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9808189,0.007136744,0.002749666,0.002113817,0.0001571975,0.001913611,0.0002075374,0.00004892397,0.004853637],"genre_scores_gemma":[0.9895782,0.0005448735,0.002738294,0.0005468139,0.0004845189,0.001211809,0.0001524655,0.00007433911,0.004668691],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03293363,"threshold_uncertainty_score":0.9654372,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2154929365","doi":"10.1158/1541-7786.mcr-07-0160","title":"Increased Expression and Activity of Nuclear Cathepsin L in Cancer Cells Suggests a Novel Mechanism of Cell Transformation","year":2007,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":140,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada); McGill University","funders":"","keywords":"Cathepsin L; Cathepsin L1; Cathepsin; Cathepsin A; Cancer cell; Cell biology; Biology; Cell growth; Cathepsin S; Cathepsin H; Cathepsin O; Molecular biology; Chemistry; Biochemistry; Cancer; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.02444309676657646,"gpt":0.3243272596427655,"spread":0.2998841628761891,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008950604,0.0001125446,0.000164956,0.0001695389,0.00004143701,0.000007641365,0.0001483949,0.0001765874,0.00002153983],"category_scores_gemma":[0.00002118326,0.0001111557,0.0000521133,0.0002072863,0.00008164877,0.00001054601,0.00009703328,0.0001842927,4.957477e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004711016,"about_ca_system_score_gemma":0.0001525953,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002944462,"about_ca_topic_score_gemma":0.0002935053,"domain_scores_codex":[0.9987319,0.0001100527,0.0002147828,0.0002676753,0.0003688034,0.0003068322],"domain_scores_gemma":[0.9994299,0.00001432039,0.00008000363,0.0002327691,0.0001515839,0.00009144458],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004314227,0.0001800982,0.00002560508,0.000156197,0.000009292457,0.000004197106,0.0002439783,0.00001932024,0.9978209,0.0002078122,0.00002066555,0.0008805293],"study_design_scores_gemma":[0.0009893458,0.0002623628,0.0001672291,0.0001132692,0.000005896978,9.539106e-7,0.00008273611,0.0001677449,0.9978024,0.0001106511,0.0001896175,0.000107786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993307,0.0006492863,0.005138152,0.00004331014,0.00003490876,0.000431631,0.0000534009,0.000003446721,0.0003388531],"genre_scores_gemma":[0.9989468,0.0004388393,0.000465554,0.00003213703,0.00002611957,0.00004279683,0.000008001316,0.00002363293,0.00001610206],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005639806,"threshold_uncertainty_score":0.4532796,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2167487237","doi":"10.1158/1541-7786.mcr-08-0578","title":"β-Arrestin/Ral Signaling Regulates Lysophosphatidic Acid–Mediated Migration and Invasion of Human Breast Tumor Cells","year":2009,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":138,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Children’s Health Research Institute; Western University","funders":"","keywords":"Lysophosphatidic acid; Cell migration; Cancer research; Biology; Metastasis; Ectopic expression; Cancer cell; Gene knockdown; Cell biology; Cell; Cancer; Receptor; Cell culture","retraction":null,"screen_n_in":null,"score":{"opus":0.02254976923853134,"gpt":0.3108297296958961,"spread":0.2882799604573648,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000617831,0.0001578038,0.0001895496,0.0001238225,0.0001676484,0.00005012989,0.0001939073,0.0001254787,0.00009052918],"category_scores_gemma":[0.00005492658,0.0001509702,0.00007045043,0.0002525716,0.0001137522,0.00000829406,0.00008717307,0.0001785721,0.000002449261],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002793762,"about_ca_system_score_gemma":0.0001174364,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003391408,"about_ca_topic_score_gemma":0.00004496384,"domain_scores_codex":[0.9983025,0.0001837009,0.0002687039,0.0004270439,0.0004486374,0.0003694521],"domain_scores_gemma":[0.9992017,0.00001531706,0.00009179585,0.0002704611,0.0002843317,0.0001363697],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009295101,0.0000430959,0.0003867564,0.0000328799,0.00002176485,0.00001509556,0.00006994979,0.000120409,0.9969511,0.0001034722,0.000161432,0.0020011],"study_design_scores_gemma":[0.0004452772,0.0005253386,0.0006816082,0.0001016293,0.00001059957,0.000008918535,0.00006926325,0.0001961308,0.9971702,0.0004558965,0.0001780038,0.0001571498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950157,0.004016992,0.0003574725,0.0002027258,0.00004550679,0.0002700355,0.00002415044,0.00001068812,0.00005668564],"genre_scores_gemma":[0.9988936,0.0002487551,0.0004398778,0.00009658336,0.00009814673,0.00002513124,0.0001078385,0.00002396644,0.00006605609],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003877901,"threshold_uncertainty_score":0.6156387,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2162048408","doi":"10.1158/1541-7786.557.2.10","title":"Low-Dose Radiation Hypersensitivity Is Associated With p53-Dependent Apoptosis","year":2004,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Effects of Radiation Exposure","field":"Medicine","cited_by":131,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Alberta Cancer Foundation","funders":"National Cancer Institute; Wayne State University; Lawrence Livermore National Laboratory; U.S. Department of Energy","keywords":"Annexin; Apoptosis; Cancer research; Flow cytometry; Clonogenic assay; Cell culture; Phosphatidylserine; Medicine; Molecular biology; Biology; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.02581647498758387,"gpt":0.3516469908073371,"spread":0.3258305158197532,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009568105,0.0001725605,0.0002843557,0.0003090074,0.0001692829,0.00005566035,0.0001125669,0.0001624111,0.00009993863],"category_scores_gemma":[0.0005234114,0.0001541247,0.00008886943,0.0008180721,0.0001401677,0.00008895136,0.0000481653,0.0006252803,0.00009745899],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001321583,"about_ca_system_score_gemma":0.000791455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009905233,"about_ca_topic_score_gemma":0.000146149,"domain_scores_codex":[0.9968505,0.0002844252,0.0001737495,0.0004632851,0.001662847,0.0005651776],"domain_scores_gemma":[0.9984852,0.0001066929,0.00006793382,0.0004530673,0.0006129132,0.0002742082],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008133571,0.0008033753,0.00694623,0.0001715422,0.0006833234,0.001029011,0.001298854,0.002660388,0.9631444,0.0002979615,0.001402632,0.02074888],"study_design_scores_gemma":[0.006414711,0.0009522403,0.03046967,0.00034558,0.00009576798,0.00002988606,0.0001204119,0.0002183747,0.9605006,0.0001148158,0.0004852579,0.0002526862],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9878513,0.0004991998,0.0003529687,0.00849405,0.00007032784,0.0009306426,0.0000290752,0.00006943868,0.001702987],"genre_scores_gemma":[0.9977489,0.0001250966,0.0001378629,0.001187435,0.00009950208,0.0001498537,0.00004128248,0.00005905066,0.0004509879],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02352343,"threshold_uncertainty_score":0.6285025,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2106990621","doi":"10.1158/1541-7786.mcr-07-0095","title":"HMGA2 Participates in Transformation in Human Lung Cancer","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute","keywords":"HMGA2; Cancer research; Biology; Lung cancer; Oncogene; Malignant transformation; Cancer; Phenotype; Pathology; Cell cycle; Gene; Medicine; microRNA; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.06081967475451056,"gpt":0.4256309861601683,"spread":0.3648113114056578,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001044031,0.0002404428,0.000269317,0.000627216,0.000202339,0.00004056116,0.0004841533,0.0003099315,0.0002307337],"category_scores_gemma":[0.00009702763,0.0002654989,0.0001127965,0.001185157,0.0002412595,0.00001819415,0.0001928461,0.0008035927,0.00001091158],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004640862,"about_ca_system_score_gemma":0.0006910987,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005884352,"about_ca_topic_score_gemma":0.006354506,"domain_scores_codex":[0.9962137,0.0005224538,0.0004518258,0.0007013469,0.0009476076,0.001163098],"domain_scores_gemma":[0.9989398,0.00001758608,0.00004655874,0.0005336047,0.0002665463,0.0001959637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001983815,0.0001321668,0.002972051,0.00007135981,0.00004609661,0.0002124025,0.0005808435,0.006229164,0.9869198,0.0002245241,0.0006714545,0.001741822],"study_design_scores_gemma":[0.001900383,0.0001922799,0.003145507,0.0001418611,0.000006977615,0.00001313641,0.0001012109,0.001997811,0.9886314,0.0001269329,0.003418639,0.000323844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9862343,0.007983859,0.002318057,0.0008203401,0.00008609,0.001050229,0.00002464271,0.00001737485,0.001465092],"genre_scores_gemma":[0.9941397,0.003245015,0.00004961602,0.0001593865,0.0001022259,0.001736159,0.00007623204,0.00007212866,0.0004195664],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007905356,"threshold_uncertainty_score":0.9999797,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2115421008","doi":"10.1158/1541-7786.mcr-08-0193","title":"Mutation of ERBB2 Provides a Novel Alternative Mechanism for the Ubiquitous Activation of RAS-MAPK in Ovarian Serous Low Malignant Potential Tumors","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":129,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Cancer Agency","funders":"National Institutes of Health","keywords":"Serous fluid; KRAS; Cancer research; Neuroblastoma RAS viral oncogene homolog; Ovarian cancer; MAPK/ERK pathway; Serous carcinoma; Carcinogenesis; Biology; HMGA2; Cancer; Medicine; Internal medicine; Signal transduction; Colorectal cancer; Gene; Genetics; microRNA","retraction":null,"screen_n_in":null,"score":{"opus":0.06228791382504891,"gpt":0.364613128376661,"spread":0.3023252145516121,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004439345,0.0001232056,0.0002804048,0.0002462365,0.00009054199,0.00001004806,0.000137354,0.00006344598,0.00002537896],"category_scores_gemma":[0.0001697391,0.0000898415,0.0001072048,0.0004252288,0.000132745,0.00006266961,0.00004862152,0.0001739688,8.452528e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003721485,"about_ca_system_score_gemma":0.0006847667,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009447502,"about_ca_topic_score_gemma":0.0001980329,"domain_scores_codex":[0.9982319,0.00009147788,0.0003240044,0.0003044206,0.0007452723,0.0003029232],"domain_scores_gemma":[0.998688,0.0001643658,0.0001414229,0.000277792,0.0006700308,0.00005841091],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001714423,0.001001313,0.0008699599,0.0004736962,0.000420779,0.0003588512,0.002169499,0.003188747,0.9768326,0.007975755,0.00008501791,0.004909348],"study_design_scores_gemma":[0.004139432,0.0007956288,0.009329782,0.0005540801,0.00005597185,0.00003125197,0.0003020581,0.004467354,0.9789585,0.001267243,0.00001855523,0.00008011995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9611943,0.0002936763,0.03283126,0.002786699,0.00008902379,0.002667343,0.00006033693,0.000007126408,0.00007027344],"genre_scores_gemma":[0.9971964,0.0001890933,0.001039192,0.00009618632,0.00007651996,0.001292836,0.00002075955,0.00002965865,0.00005938518],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03600211,"threshold_uncertainty_score":0.9971487,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2171286940","doi":"10.1158/1541-7786.mcr-09-0277","title":"Clusterin Facilitates COMMD1 and I-κB Degradation to Enhance NF-κB Activity in Prostate Cancer Cells","year":2010,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Clusterin in disease pathology","field":"Medicine","cited_by":127,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Cancer Institute","keywords":"Clusterin; Gene knockdown; Prostate cancer; Cancer research; Ubiquitin; NF-κB; Ubiquitin ligase; Chemistry; Apoptosis; Cancer; Biology; Medicine; Internal medicine; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04065767453203583,"gpt":0.4377920355030051,"spread":0.3971343609709692,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007948515,0.0001817434,0.0002978478,0.0003421646,0.00009621004,0.00004855675,0.0001787507,0.0001106427,0.000263953],"category_scores_gemma":[0.0002513326,0.0001794582,0.00004056687,0.0005469233,0.0002809454,0.00008899053,0.0003850387,0.0008719162,0.00004067072],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002803739,"about_ca_system_score_gemma":0.0003558669,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0055062,"about_ca_topic_score_gemma":0.008121671,"domain_scores_codex":[0.997673,0.0002833765,0.0002193429,0.0006205081,0.0005639678,0.0006398116],"domain_scores_gemma":[0.9987046,0.0001220035,0.00003740371,0.0005360338,0.0002628832,0.00033712],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008235187,0.0001055521,0.012972,0.0002702216,0.00001877228,0.0002281242,0.0007904897,0.00005666287,0.9496056,0.000008298079,0.0004760527,0.03464469],"study_design_scores_gemma":[0.0009165027,0.0002361755,0.04546908,0.0001756347,0.00001430158,0.00001562653,0.0001157581,0.0005465399,0.9475502,0.00008163178,0.004671936,0.000206558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990268,0.0006337842,0.0001780944,0.006782134,0.0001994474,0.001504109,0.0001193938,0.00003104842,0.0002839851],"genre_scores_gemma":[0.9962887,0.0002944782,0.0005891455,0.0004180477,0.00005187216,0.001171576,0.00001272446,0.00003887486,0.001134563],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03443813,"threshold_uncertainty_score":0.8323764,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2525061549","doi":"10.1158/1541-7786.mcr-16-0192","title":"Senescent Carcinoma-Associated Fibroblasts Upregulate IL8 to Enhance Prometastatic Phenotypes","year":2016,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":123,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Sinai Hospital; Princess Margaret Cancer Centre; Ontario Institute for Cancer Research; University of Toronto; University Health Network","funders":"","keywords":"Pancreatic cancer; Cancer research; Metastasis; Stromal cell; Cancer-Associated Fibroblasts; Cancer; Biology; Stroma; Interleukin 8; Downregulation and upregulation; Cancer cell; Tumor progression; Tissue microarray; Cytokine; Pathology; Medicine; Immunology; Immunohistochemistry; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04007526625776147,"gpt":0.3895211482643345,"spread":0.349445882006573,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000811411,0.0002849365,0.0004794789,0.0004408911,0.000178176,0.00005043191,0.0003444944,0.0001217688,0.000524605],"category_scores_gemma":[0.0006698355,0.0002042238,0.000137493,0.001306373,0.0002289729,0.0000967847,0.0002187488,0.0003368507,0.0003760579],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007793021,"about_ca_system_score_gemma":0.0007118647,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001072565,"about_ca_topic_score_gemma":0.0003036908,"domain_scores_codex":[0.9956539,0.0003704347,0.0003857079,0.0008275409,0.001540596,0.001221856],"domain_scores_gemma":[0.9975671,0.0001464106,0.00007004879,0.0007988616,0.0007790179,0.0006386309],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004863288,0.0002014911,0.006295054,0.0001980672,0.0001322106,0.000398969,0.000538488,0.00001173351,0.9393612,0.00009646729,0.002906344,0.04937372],"study_design_scores_gemma":[0.001389688,0.0007145926,0.05678937,0.001249288,0.00005410796,0.0000184979,0.00008219236,0.00006207389,0.9317943,0.0002233126,0.007230888,0.0003916989],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9876714,0.001377217,0.00120779,0.007689731,0.0001419688,0.001270796,0.0000482324,0.000106791,0.0004860416],"genre_scores_gemma":[0.9912831,0.0001600099,0.0005262863,0.0005276671,0.0001088989,0.0003014825,0.00001138657,0.00008317173,0.006998065],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05049432,"threshold_uncertainty_score":0.8328003,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2013623922","doi":"10.1158/1541-7786.mcr-06-0273","title":"Down-Regulation of Sprouty2 in Non–Small Cell Lung Cancer Contributes to Tumor Malignancy via Extracellular Signal-Regulated Kinase Pathway-Dependent and -Independent Mechanisms","year":2007,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Fibroblast Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Cancer research; MAPK/ERK pathway; Biology; Receptor tyrosine kinase; Signal transduction; Cell growth; Kinase; Protein kinase A; Tyrosine kinase; Ectopic expression; Cell biology; Cell culture; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01344246419805344,"gpt":0.2990442572970737,"spread":0.2856017930990203,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00254107,0.000366698,0.0004241383,0.0007154412,0.0001320999,0.00007507538,0.0005431017,0.0003308813,0.0001295071],"category_scores_gemma":[0.00008760636,0.0003784872,0.0001178505,0.0009276486,0.0001666216,0.00001500623,0.0006385365,0.0005204172,0.000007714666],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003776583,"about_ca_system_score_gemma":0.0004824476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00320234,"about_ca_topic_score_gemma":0.001854066,"domain_scores_codex":[0.9954311,0.00036046,0.0006619549,0.001059327,0.001192696,0.001294468],"domain_scores_gemma":[0.9979876,0.00006145638,0.000141929,0.0006563065,0.0007603371,0.0003923486],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007870507,0.00019105,0.007425135,0.0003446962,0.00008266904,0.0002194841,0.000127289,0.001227716,0.9864591,0.0002037201,0.0000632716,0.002868799],"study_design_scores_gemma":[0.001835937,0.0004311559,0.01992797,0.0002680918,0.00001948884,0.000006910401,0.0001030735,0.001000594,0.9755648,0.0002854093,0.0001941722,0.0003623991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9314218,0.008255893,0.05768114,0.0001936577,0.0000836046,0.002157665,0.00008117181,0.00001364211,0.0001114422],"genre_scores_gemma":[0.997883,0.0001209521,0.0006226433,0.00006554003,0.000060574,0.000416142,0.00005799142,0.00009336657,0.0006798347],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06646118,"threshold_uncertainty_score":0.9998667,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2140740264","doi":"10.1158/1541-7786.mcr-07-0294","title":"Transforming Growth Factor-β1, Transforming Growth Factor-β2, and Transforming Growth Factor-β3 Enhance Ovarian Cancer Metastatic Potential by Inducing a Smad3-Dependent Epithelial-to-Mesenchymal Transition","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"TGF-β signaling in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Science North","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institutes of Health","keywords":"Transforming growth factor; Epithelial–mesenchymal transition; Cancer research; Ovarian cancer; Carcinogenesis; Biology; Small interfering RNA; Metastasis; Cancer cell; microRNA; Transforming growth factor beta; Transfection; Cancer; Endocrinology; Cell culture; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02882556907520099,"gpt":0.321598381548112,"spread":0.292772812472911,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000652134,0.0009148043,0.0008235701,0.0005910706,0.001070592,0.0002222598,0.0008362495,0.0004815429,0.000245152],"category_scores_gemma":[0.0001657444,0.00094183,0.0004462705,0.0008093047,0.0004366869,0.0001549748,0.0001214728,0.001059955,0.00001256198],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003890886,"about_ca_system_score_gemma":0.001139599,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006157465,"about_ca_topic_score_gemma":0.0008107129,"domain_scores_codex":[0.9925707,0.0006139912,0.0009823544,0.00185345,0.001975049,0.002004453],"domain_scores_gemma":[0.9975098,0.00008908535,0.0001576658,0.0005655576,0.0007436986,0.0009341305],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007688189,0.0002108302,0.000613087,0.0005217687,0.0004926007,0.0002250134,0.00518335,0.0001626571,0.9838284,0.00002955416,0.0000673281,0.007896567],"study_design_scores_gemma":[0.002223961,0.0005965143,0.001285993,0.0003199547,0.0001333144,0.00008236403,0.0004069993,0.0001018814,0.9930142,0.00008739645,0.000632373,0.001115116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9122939,0.00488561,0.07779389,0.0007951356,0.0002363882,0.001937473,0.001873013,0.00008923961,0.00009536386],"genre_scores_gemma":[0.9946483,0.002628769,0.0005619218,0.0003188621,0.0003436817,0.0008016238,0.0002773719,0.0002469846,0.000172522],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08235437,"threshold_uncertainty_score":0.9993032,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2973636623","doi":"10.1158/1541-7786.mcr-19-0264","title":"A Unique Morphological Phenotype in Chemoresistant Triple-Negative Breast Cancer Reveals Metabolic Reprogramming and PLIN4 Expression as a Molecular Vulnerability","year":2019,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":111,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre Hospitalier de l’Université de Montréal; McGill University; University of Victoria; McGill Genome Centre; Hôpital du Sacré-Cœur de Montréal; Hôpital Maisonneuve-Rosemont; McGill University and Génome Québec Innovation Centre; Montreal General Hospital; Jewish General Hospital","funders":"Biotalent Canada; National Cancer Institute; Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Fondation de l'Hôpital général juif; McGill University","keywords":"Cancer research; Triple-negative breast cancer; Breast cancer; Cancer; Chemotherapy; Phenotype; Biology; Perilipin; Doxorubicin; Reprogramming; Cancer cell; Lipid droplet; Cell; Cell biology; Adipose tissue; Endocrinology; Gene; Lipolysis; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.0235576029281825,"gpt":0.3532811209858057,"spread":0.3297235180576232,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001880821,0.0003432813,0.0005310858,0.0002011343,0.0001363534,0.00008712726,0.0004579753,0.0003764316,0.0002336898],"category_scores_gemma":[0.0004853064,0.0002845643,0.0001416113,0.0006328575,0.0003171679,0.00001720786,0.0005756042,0.0005859909,0.00001564912],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008732374,"about_ca_system_score_gemma":0.0004021239,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001802134,"about_ca_topic_score_gemma":0.0001504541,"domain_scores_codex":[0.9957219,0.0009627831,0.0004387384,0.001330987,0.0006877949,0.0008578117],"domain_scores_gemma":[0.9982859,0.00006497549,0.0001149125,0.0009059759,0.0003600216,0.0002681828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006715407,0.0001648607,0.0114807,0.0001012963,0.00006857202,0.00006764726,0.0001525651,0.00003064678,0.9756463,0.0002238907,0.00007426703,0.01131778],"study_design_scores_gemma":[0.001308043,0.0001053714,0.02256029,0.0001584687,0.00002394726,0.00002036021,0.0001512438,0.00002756251,0.969947,0.0005332856,0.004785945,0.000378441],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9863679,0.01113773,0.000125717,0.0006002305,0.0001002055,0.001215185,0.00007321857,0.0000219283,0.0003578768],"genre_scores_gemma":[0.9955576,0.001427085,0.001337093,0.0003199851,0.0001443105,0.0007088646,0.00002960802,0.00005789366,0.0004175354],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0110796,"threshold_uncertainty_score":0.9999607,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2138284475","doi":"10.1158/1541-7786.mcr-07-2170","title":"The Multifunctional Protein Glyceraldehyde-3-Phosphate Dehydrogenase Is Both Regulated and Controls Colony-Stimulating Factor-1 Messenger RNA Stability in Ovarian Cancer","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Cancer Institute; National Institutes of Health; University of Arizona Cancer Center","keywords":"Glyceraldehyde 3-phosphate dehydrogenase; Messenger RNA; Untranslated region; Biology; Molecular biology; Ovarian cancer; RNA; Three prime untranslated region; Cancer research; Cancer; Gene; Biochemistry; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.04286471398036281,"gpt":0.3536136448559579,"spread":0.3107489308755951,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007280865,0.000248415,0.0002386049,0.00007598208,0.0006669823,0.00005243873,0.0003298109,0.0002901245,0.0001136578],"category_scores_gemma":[0.0001536678,0.0002036162,0.0001002015,0.0003609781,0.0006322533,0.000008673372,0.0002669077,0.0004738673,0.000002802324],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001357793,"about_ca_system_score_gemma":0.0004072145,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002291469,"about_ca_topic_score_gemma":0.0006805863,"domain_scores_codex":[0.9973,0.0004280239,0.0003762122,0.0007947927,0.0004225251,0.0006784666],"domain_scores_gemma":[0.9986968,0.00005593723,0.00009985807,0.0006547916,0.0003252237,0.0001673899],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003385708,0.00006397647,0.008204236,0.00001637986,0.0000858097,0.00002641339,0.00006729274,0.00009306236,0.9892299,0.0002278366,0.000386589,0.00125998],"study_design_scores_gemma":[0.001223106,0.0001763439,0.01386917,0.00003556498,0.000008835546,0.0000121426,0.00002026893,0.001301868,0.9693156,0.0002499217,0.01351223,0.0002749318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890137,0.005436743,0.001019398,0.002452587,0.00003216412,0.00176336,0.0001104814,0.00002353177,0.0001479798],"genre_scores_gemma":[0.9950539,0.00121675,0.0004368228,0.0003601912,0.00006572787,0.002317006,0.00005318169,0.00004512202,0.0004512263],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01991424,"threshold_uncertainty_score":0.8303228,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2141808185","doi":"10.1158/1541-7786.mcr-10-0214","title":"Mouse Snail Is a Target Gene for HIF","year":2011,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":105,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Snail; Biology; Transcription factor; Gene knockdown; Gene; Cell biology; Molecular biology; Hypoxia-inducible factors; Reporter gene; Gene expression; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.07420348739496922,"gpt":0.3625160852510524,"spread":0.2883125978560832,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005575044,0.0002012315,0.0002126694,0.00012661,0.0001866889,0.0000376047,0.0004752481,0.00020881,0.0003633343],"category_scores_gemma":[0.00009498611,0.0002020094,0.0002105513,0.0002372549,0.0001877588,0.000005702099,0.0002259815,0.0002144046,0.00002829997],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004753977,"about_ca_system_score_gemma":0.0004068355,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005992225,"about_ca_topic_score_gemma":0.00009317983,"domain_scores_codex":[0.997808,0.0001148706,0.0002099305,0.0006597563,0.0004323152,0.0007751334],"domain_scores_gemma":[0.9985325,0.000009074905,0.00004821335,0.000711174,0.0004688231,0.0002302096],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003418697,0.00008296775,0.0001216427,0.00004163413,0.0001211122,0.000004559166,0.0002328956,0.00000741679,0.9407444,0.0002239891,0.05304681,0.005030716],"study_design_scores_gemma":[0.0005812124,0.0001497735,0.00008215485,0.000005204582,0.00001175858,0.000003122827,0.00002915116,0.00001710742,0.5913157,0.000339377,0.4073095,0.0001559688],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9345226,0.03873799,0.01593589,0.0007927965,0.001598672,0.001750433,0.000556039,0.00004790695,0.006057704],"genre_scores_gemma":[0.9350024,0.009052381,0.01612861,0.003385171,0.005386926,0.003115862,0.0003505546,0.0003142976,0.02726374],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3542627,"threshold_uncertainty_score":0.8237705,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100927775","doi":"10.1158/1541-7786.mcr-07-2175","title":"Sox7 Is an Independent Checkpoint for β-Catenin Function in Prostate and Colon Epithelial Cells","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":89,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Immunovaccine (Canada)","funders":"National Cancer Institute","keywords":"Cancer research; Ectopic expression; Biology; Wnt signaling pathway; Catenin; Gene silencing; Prostate cancer; Prostate; Adenomatous polyposis coli; Chromoplexy; Epigenetics; Colorectal cancer; Cancer; Cell culture; Gene; PCA3; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.05095470686040408,"gpt":0.3384337767221741,"spread":0.28747906986177,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007463885,0.0001653609,0.0001601116,0.00009731097,0.0001810228,0.00003821802,0.0001899909,0.0001575802,0.00006325643],"category_scores_gemma":[0.00002450495,0.0001650045,0.00005699363,0.000167581,0.0001695112,0.00001254716,0.0001381691,0.0001959917,0.000005931843],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001134536,"about_ca_system_score_gemma":0.0003769811,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005613297,"about_ca_topic_score_gemma":0.0003946496,"domain_scores_codex":[0.9981316,0.0001250231,0.0002339016,0.0006055465,0.0003919683,0.0005119206],"domain_scores_gemma":[0.9993195,0.00001038216,0.00004845687,0.0002316911,0.0002620332,0.0001279656],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008954701,0.00006480989,0.001597473,0.00003824678,0.00004113722,0.00002036691,0.0004253485,0.00006818387,0.9936251,0.00002587881,0.001232665,0.001965303],"study_design_scores_gemma":[0.001398921,0.000521922,0.002019897,0.00001984714,0.000007563269,0.000009960013,0.0001161158,0.0001258968,0.9784052,0.0002692329,0.01688248,0.0002229013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954695,0.002336062,0.0007830127,0.0003186172,0.0001450994,0.000751311,0.00004311015,0.00001025669,0.0001430137],"genre_scores_gemma":[0.9948421,0.001676519,0.0004252981,0.0002521489,0.000144713,0.0007559582,0.00008153544,0.00004478214,0.001776919],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01564982,"threshold_uncertainty_score":0.6728689,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2328043056","doi":"10.1158/1541-7786.mcr-14-0450","title":"Interferon Receptor Signaling in Malignancy: A Network of Cellular Pathways Defining Biological Outcomes","year":2014,"lang":"en","type":"review","venue":"Molecular Cancer Research","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":87,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University Health Network","funders":"National Cancer Institute","keywords":"Signal transduction; Biology; MAPK/ERK pathway; stat; PI3K/AKT/mTOR pathway; JAK-STAT signaling pathway; Cancer research; Immune system; Interferon; Cell biology; Immunology; Receptor tyrosine kinase; STAT3","retraction":null,"screen_n_in":null,"score":{"opus":0.2049390859221344,"gpt":0.4474902508916858,"spread":0.2425511649695514,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002200541,0.0004785953,0.002736202,0.0005973246,0.00009573316,0.00004113817,0.0004328533,0.0005325355,0.0006976115],"category_scores_gemma":[0.0006134436,0.0003578196,0.0009159018,0.001186386,0.0001878911,0.00003291152,0.0003231573,0.002002788,0.0001065778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005683165,"about_ca_system_score_gemma":0.0009382489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003806459,"about_ca_topic_score_gemma":0.00002280283,"domain_scores_codex":[0.9951735,0.001074234,0.001266557,0.0008019087,0.0007647425,0.0009190588],"domain_scores_gemma":[0.9977469,0.0006471218,0.0003438207,0.000693535,0.0003625924,0.0002060259],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000417966,0.0006513958,0.001381807,0.03320386,0.001265876,0.0008050446,0.0003747222,0.0001942484,0.08698115,0.00504034,0.00253055,0.867153],"study_design_scores_gemma":[0.000755508,0.001149217,0.0000122034,0.08278913,0.0002796973,0.00002487909,0.00004892691,0.00003525677,0.007066682,0.0001794978,0.9071438,0.0005151476],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004389126,0.9925312,0.0005421327,0.00009678062,0.0003363513,0.001240038,0.00007394725,0.00004180833,0.0007485469],"genre_scores_gemma":[0.02505208,0.9726568,0.0006926834,0.00007841667,0.0002898336,0.0007354352,0.000244143,0.0001336755,0.0001169519],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9046133,"threshold_uncertainty_score":0.9998874,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2151862407","doi":"10.1158/1541-7786.mcr-08-0274","title":"The Human Host Defense Peptide LL-37 Induces Apoptosis in a Calpain- and Apoptosis-Inducing Factor–Dependent Manner Involving Bax Activity","year":2009,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; University of Alberta; University of British Columbia","funders":"National Institutes of Health; Genome Prairie; Fondation pour la Recherche Médicale; Genome British Columbia; Genome Canada; Foundation for the National Institutes of Health","keywords":"Apoptosis; Calpain; Peptide; Cell biology; Cancer research; Biology; Chemistry; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.03857336187241687,"gpt":0.3426574925103474,"spread":0.3040841306379305,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001064392,0.0002049687,0.0001682989,0.0001517689,0.0005970857,0.0001820249,0.0002272683,0.000229794,0.00001945098],"category_scores_gemma":[0.000209984,0.0001665545,0.00008709293,0.0003090509,0.0001724846,0.0000155547,0.000195507,0.0005167242,0.000003118515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001646072,"about_ca_system_score_gemma":0.0001294977,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001014779,"about_ca_topic_score_gemma":0.0007328641,"domain_scores_codex":[0.9974898,0.0005493512,0.000227454,0.0006000794,0.0005569456,0.0005764411],"domain_scores_gemma":[0.9991115,0.00004585481,0.00007024647,0.0004495691,0.0001637554,0.0001591037],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001133275,0.00006213013,0.001464245,0.00001910475,0.00003583028,0.000004969761,0.0001480029,0.00006996487,0.9894628,0.0001793565,0.0003291751,0.008111107],"study_design_scores_gemma":[0.0006253992,0.0002176262,0.02480762,0.00006788182,0.000008774703,0.000004068348,0.000269343,0.0001061807,0.9714566,0.0002083981,0.001983214,0.0002448442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952784,0.001867974,0.0001811425,0.001632692,0.00009010468,0.000555174,0.000007774734,0.00001566013,0.0003711136],"genre_scores_gemma":[0.9981246,0.0005902614,0.00002997357,0.000207944,0.0001553398,0.0001415581,0.00001627256,0.0000275884,0.0007064822],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02334337,"threshold_uncertainty_score":0.6791895,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2133410449","doi":"10.1158/1541-7786.mcr-08-0577","title":"K-Ras Promotes Angiogenesis Mediated by Immortalized Human Pancreatic Epithelial Cells through Mitogen-Activated Protein Kinase Signaling Pathways","year":2009,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; University of Toronto","keywords":"Cancer research; Angiogenesis; Signal transduction; Mitogen-activated protein kinase; Protein kinase A; Kinase; Cell biology; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.04013239463399054,"gpt":0.3415678542085472,"spread":0.3014354595745567,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008621909,0.0005166237,0.0004964118,0.0001696835,0.0004371727,0.0001443517,0.0008000261,0.0004474959,0.0002447061],"category_scores_gemma":[0.0002311897,0.0005147021,0.0002986084,0.0007976435,0.0003098226,0.00002043063,0.0001857705,0.000463806,0.00003284855],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002324919,"about_ca_system_score_gemma":0.0005483449,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001082741,"about_ca_topic_score_gemma":0.00003477205,"domain_scores_codex":[0.9949506,0.0007664387,0.0005617528,0.001233848,0.001199837,0.001287554],"domain_scores_gemma":[0.9979168,0.00004194645,0.0001922742,0.0009655725,0.0005778627,0.0003055908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004062905,0.0002138801,0.00008335667,0.00006727636,0.0002722968,0.0001083937,0.0001816905,0.0000842801,0.9957622,0.00004813711,0.001994403,0.0007777644],"study_design_scores_gemma":[0.001625345,0.0009816149,0.00004001088,0.0001470254,0.00005317097,0.000004204133,0.00005219258,0.00002925449,0.9882501,0.0004213137,0.007793499,0.0006022819],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9877614,0.008450281,0.00101926,0.0003027437,0.000141916,0.001591063,0.0003565386,0.00008671327,0.0002901363],"genre_scores_gemma":[0.9966007,0.0002296257,0.0005693639,0.0003198289,0.0003484936,0.0007263533,0.0005644789,0.0001405566,0.0005006049],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008839346,"threshold_uncertainty_score":0.9997305,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2137956088","doi":"10.1158/1541-7786.mcr-08-0094","title":"Autoubiquitination of BCA2 RING E3 Ligase Regulates Its Own Stability and Affects Cell Migration","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"National Cancer Institute; National Institutes of Health; Canadian Breast Cancer Research Alliance","keywords":"Ubiquitin ligase; Ubiquitin; Mutant; Cell biology; Chemistry; Mutation; Ring finger; Biochemistry; Biology; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04951150497822344,"gpt":0.3250030935211776,"spread":0.2754915885429542,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007255736,0.0001275038,0.0001431782,0.00009803576,0.0001651854,0.00002025316,0.0001485236,0.0001420376,0.00004664329],"category_scores_gemma":[0.0001844386,0.0001282703,0.00005853503,0.0002100453,0.0001938302,0.000009186122,0.0001703675,0.0001735789,0.000003357886],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003949656,"about_ca_system_score_gemma":0.0002044418,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001612242,"about_ca_topic_score_gemma":0.00007149039,"domain_scores_codex":[0.9983935,0.0003029267,0.0001705959,0.0004063011,0.0003995673,0.000327087],"domain_scores_gemma":[0.9991289,0.00002948429,0.00006794221,0.0003188051,0.0003435241,0.0001113225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008905584,0.00005790449,0.001454199,0.0001935875,0.00001463298,0.00001207222,0.0002462552,0.0000323824,0.996385,0.0000864797,0.000171426,0.001256968],"study_design_scores_gemma":[0.0004383905,0.0003132677,0.002663471,0.00003804215,0.000005705201,0.000008073518,0.00004647509,0.0003008665,0.9947102,0.00007291912,0.001273437,0.0001291249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923522,0.005261523,0.0001552174,0.0002299458,0.00002947196,0.0004827958,0.00002713614,0.00001256586,0.001449169],"genre_scores_gemma":[0.9981911,0.001011975,0.000199237,0.00003516704,0.00006959774,0.0001213863,0.0000458562,0.00002337096,0.0003023784],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005838856,"threshold_uncertainty_score":0.5230709,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2404978977","doi":"10.1158/1541-7786.595.2.11","title":"Src Regulates Actin Dynamics and Invasion of Malignant Glial Cells in Three Dimensions","year":2004,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"SickKids Foundation; University of Toronto; McGill University; Hospital for Sick Children; Montreal Neurological Institute and Hospital","funders":"","keywords":"Proto-oncogene tyrosine-protein kinase Src; Glioma; Cancer research; Actin; Cell biology; Biology; Actin cytoskeleton; Focal adhesion; Cell migration; Cytoskeleton; Cell; Kinase; Signal transduction; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.02646231766480064,"gpt":0.3227769104588065,"spread":0.2963145927940058,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003527371,0.0001071594,0.0001325327,0.0001470813,0.00007510284,0.00002082363,0.0001516391,0.0001294142,0.00002372351],"category_scores_gemma":[0.00005812076,0.0001040116,0.00005865439,0.0002261429,0.00009675579,0.000005058845,0.0002646112,0.0002196652,0.000002915867],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008878208,"about_ca_system_score_gemma":0.0001838139,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00167852,"about_ca_topic_score_gemma":0.004030946,"domain_scores_codex":[0.998829,0.00007213204,0.0001920481,0.0003492864,0.0002605018,0.0002970316],"domain_scores_gemma":[0.999377,0.00001306842,0.00004382249,0.0003323089,0.0001515498,0.00008226129],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008568141,0.00007879012,0.0001880715,0.00002226308,0.00002162588,0.0000227347,0.00003437698,0.0004690372,0.9952347,0.002785655,0.00004280461,0.001014307],"study_design_scores_gemma":[0.0005492122,0.0002369897,0.0003125713,0.00008558137,0.000006266914,0.000007562462,0.00008897443,0.0007023292,0.9951774,0.002105762,0.0006164556,0.0001108522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960626,0.001327853,0.00155817,0.0004572512,0.0000979305,0.0002558655,0.00002976609,0.000003474535,0.0002071174],"genre_scores_gemma":[0.9982223,0.001116065,0.0003540681,0.00003554024,0.00003110881,0.00003739102,0.00003515997,0.00002355308,0.0001448327],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002352426,"threshold_uncertainty_score":0.424147,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2803341036","doi":"10.1158/1541-7786.mcr-17-0410","title":"SREBF1 Activity Is Regulated by an AR/mTOR Nuclear Axis in Prostate Cancer","year":2018,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer, Lipids, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Prostate cancer; PI3K/AKT/mTOR pathway; Androgen receptor; Biology; Cancer research; Androgen; Prostate; Endocrinology; Transcription factor; Cancer; Internal medicine; Signal transduction; Cell biology; Biochemistry; Medicine; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02524539947518853,"gpt":0.3623108276050286,"spread":0.3370654281298401,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006676898,0.0002691761,0.0002892429,0.0001785281,0.0002127226,0.00009761781,0.0005035224,0.0002501902,0.0005195386],"category_scores_gemma":[0.00006428211,0.0002761297,0.0001039201,0.0006013284,0.000498257,0.00002220134,0.0002753729,0.0004301775,0.00003473032],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000192439,"about_ca_system_score_gemma":0.0005354309,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01020916,"about_ca_topic_score_gemma":0.0031081,"domain_scores_codex":[0.9967933,0.0003738718,0.000243993,0.0009883057,0.0006415226,0.0009590382],"domain_scores_gemma":[0.9982905,0.000007811904,0.00007088375,0.0008634636,0.0004676176,0.0002997668],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000694347,0.000127391,0.0007329199,0.00003137003,0.0000615264,0.000001790437,0.0004237895,0.00001348859,0.8870717,0.00001928708,0.0919821,0.01884032],"study_design_scores_gemma":[0.0008171745,0.0003040759,0.00184287,0.00003301382,0.000008835996,0.000002373548,0.00006309429,0.0001430172,0.4833358,0.00004104521,0.5131588,0.0002499192],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905471,0.00512425,0.00003981695,0.001234307,0.001381789,0.0006186442,0.0002273747,0.00002711414,0.0007996037],"genre_scores_gemma":[0.9881646,0.003333141,0.00007495133,0.0008208872,0.003704839,0.0003196055,0.00005896092,0.0001106906,0.003412334],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4211767,"threshold_uncertainty_score":0.9999691,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2928270062","doi":"10.1158/1541-7786.mcr-18-1101","title":"Whole-Genome and Transcriptional Analysis of Treatment-Emergent Small-Cell Neuroendocrine Prostate Cancer Demonstrates Intraclass Heterogeneity","year":2019,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Cancer Institute","keywords":"Prostate cancer; Genome; Biology; Cancer research; Cancer; Computational biology; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.05592137243632544,"gpt":0.3712267327711843,"spread":0.3153053603348589,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002728694,0.0002836038,0.0006481219,0.0008271439,0.0001168155,0.00004688859,0.0001661527,0.00006351847,0.0006107853],"category_scores_gemma":[0.00001057108,0.0002226264,0.0002948229,0.001602282,0.0003118711,0.00007278082,0.00008907109,0.0003550834,0.00001537635],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005872939,"about_ca_system_score_gemma":0.0009935009,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004490101,"about_ca_topic_score_gemma":0.00101236,"domain_scores_codex":[0.9970545,0.0002385785,0.000382416,0.0007359482,0.0007815766,0.000806941],"domain_scores_gemma":[0.9985552,0.00005302801,0.00007462897,0.0004732882,0.0004658309,0.0003780002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001038663,0.0003650809,0.2018353,0.0003269383,0.002430681,0.0001598929,0.0002683581,0.0008490305,0.7890272,0.00005443715,0.00001395093,0.003630564],"study_design_scores_gemma":[0.009205978,0.003474583,0.2639425,0.0001568142,0.002587749,0.00002544494,0.0004916464,0.003762041,0.7060032,0.00005659674,0.009815674,0.0004778193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9697523,0.02506259,0.00002320958,0.0024774,0.00006695156,0.001601131,0.0006389105,0.00002398634,0.0003535166],"genre_scores_gemma":[0.9792148,0.01646635,0.00007765948,0.00007587109,0.00003854698,0.0004635125,0.0003521869,0.00004703544,0.003263959],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08302396,"threshold_uncertainty_score":0.9078442,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2189465456","doi":"10.1158/1541-7786.495.2.9","title":"Minimal 16q Genomic Loss Implicates <i>Cadherin-11</i> in Retinoblastoma","year":2004,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"University of Toronto; National Cancer Institute; Helen Keller Foundation for Research and Education","keywords":"Retinoblastoma; Loss of heterozygosity; Biology; Exon; Cancer research; Intron; Gene; Tumor suppressor gene; Molecular biology; Allele; Genetics; Carcinogenesis","retraction":null,"screen_n_in":null,"score":{"opus":0.03676943961259602,"gpt":0.3980286493038151,"spread":0.3612592096912191,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000415749,0.0001624508,0.0002885767,0.0002526083,0.00009586909,0.00001885051,0.0001897249,0.000181599,0.0001772354],"category_scores_gemma":[0.00005840185,0.0001502541,0.0001009598,0.0005331359,0.000284398,0.00004042366,0.0001472216,0.0005171858,0.000290085],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008642217,"about_ca_system_score_gemma":0.0006528423,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001965428,"about_ca_topic_score_gemma":0.0007569394,"domain_scores_codex":[0.9979835,0.0001317355,0.0002267859,0.0004879333,0.0004568268,0.0007132105],"domain_scores_gemma":[0.9991657,0.00003633852,0.00003067333,0.0004336248,0.0001287167,0.0002049482],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009913265,0.0008875323,0.3788936,0.0001430513,0.0002157819,0.01149322,0.0004298369,0.0001311863,0.6008109,0.001177731,0.0003536865,0.004472224],"study_design_scores_gemma":[0.0131353,0.001733837,0.344575,0.0003249742,0.0000810875,0.0004153202,0.0001923959,0.00001890562,0.619217,0.002025333,0.01791538,0.0003654155],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9888963,0.002308402,0.0000311177,0.006072949,0.00005380986,0.0006703413,0.00001011555,0.00003464433,0.001922328],"genre_scores_gemma":[0.9979718,0.0002339707,0.0004795962,0.0004542922,0.0000714788,0.0003195133,0.00001581445,0.00004457367,0.0004089664],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0343185,"threshold_uncertainty_score":0.6127185,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2119543578","doi":"10.1158/1541-7786.mcr-07-0080","title":"Down-Regulation of Mcl-1 by Small Interfering RNA Sensitizes Resistant Melanoma Cells to Fas-Mediated Apoptosis","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Institut National de la Santé et de la Recherche Médicale; Canadian Institutes of Health Research; Cancer Research Society; Association pour la Recherche sur le Cancer","keywords":"MAPK/ERK pathway; Protein kinase A; Cancer research; Protein kinase B; Cycloheximide; UVB-induced apoptosis; Fas ligand; Apoptosis; Kinase; Melanoma; Small interfering RNA; Signal transduction; Biology; Fas receptor; Cell biology; Cell culture; Programmed cell death; Molecular biology; Transfection; Caspase; Protein biosynthesis; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.02808131905398659,"gpt":0.2904974139507689,"spread":0.2624160948967824,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000378977,0.0001681616,0.0002004692,0.0001770217,0.0001425706,0.00002097942,0.0002117941,0.0001822162,0.00005474376],"category_scores_gemma":[0.0000569558,0.0001641701,0.0001198455,0.000342061,0.0001140337,0.0000042697,0.0002047368,0.0001425476,0.00001070998],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008083426,"about_ca_system_score_gemma":0.0001213476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006451322,"about_ca_topic_score_gemma":0.00008860825,"domain_scores_codex":[0.9981737,0.0001802855,0.0002878293,0.0004708392,0.000465029,0.000422275],"domain_scores_gemma":[0.9989397,0.00002034498,0.00006757611,0.0004312353,0.0003757117,0.0001654339],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002962937,0.00004275664,0.00004840932,0.00004102879,0.00006833032,0.000006563203,0.0001168867,0.0005757129,0.9944361,0.00003982781,0.002932274,0.001395856],"study_design_scores_gemma":[0.0004113946,0.0003824773,0.0006232465,0.00004596871,0.00001057709,0.000003333473,0.00004819552,0.0002205824,0.9880105,0.00002433253,0.01003651,0.0001828888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9884096,0.001820486,0.008480755,0.0002750546,0.0001105263,0.0004078936,0.00006083398,0.00001384223,0.0004209815],"genre_scores_gemma":[0.9967253,0.0008823281,0.0007603464,0.00007831576,0.00008868424,0.00006475316,0.0001674746,0.0000427633,0.001190087],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00831562,"threshold_uncertainty_score":0.6694663,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2522355464","doi":"10.1158/1541-7786.mcr-16-0103","title":"Oncofetal Chondroitin Sulfate Glycosaminoglycans Are Key Players in Integrin Signaling and Tumor Cell Motility","year":2016,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Cancer Institute; Lundbeckfonden","keywords":"Glycosaminoglycan; Motility; Cell biology; Chondroitin sulfate; Integrin; Cancer research; Chemistry; Cell; Biology; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.03066667134273571,"gpt":0.3343713922350975,"spread":0.3037047208923618,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001623764,0.0003617295,0.0003782861,0.0004191284,0.0001909754,0.0001074243,0.0006787336,0.0002556247,0.000151879],"category_scores_gemma":[0.0004024666,0.0002896382,0.0001320433,0.000576359,0.000609626,0.00002271768,0.0006467581,0.00069458,0.00002788732],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002883672,"about_ca_system_score_gemma":0.0005782136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001990813,"about_ca_topic_score_gemma":0.002022068,"domain_scores_codex":[0.9953813,0.0006297551,0.0004421957,0.001224924,0.0009427825,0.001379068],"domain_scores_gemma":[0.9982605,0.00009286395,0.00009543843,0.000764482,0.0003612289,0.0004254933],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006072195,0.000129468,0.02167669,0.0001067119,0.00003630481,0.0003656413,0.00008587631,0.00003977257,0.967768,0.00007457621,0.0004024832,0.008707241],"study_design_scores_gemma":[0.002559928,0.000454909,0.01054916,0.0002369773,0.000007622863,0.00002651553,0.0003039654,0.000121349,0.9765329,0.0002023912,0.008600197,0.0004040313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922146,0.003092255,0.001478514,0.00106363,0.00008433082,0.0008051647,0.0001868206,0.00002019969,0.001054476],"genre_scores_gemma":[0.9964612,0.0007871859,0.0002844623,0.0001410598,0.0001455075,0.0004302651,0.00002718286,0.00007692714,0.001646225],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01112753,"threshold_uncertainty_score":0.9999556,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2001975245","doi":"10.1158/1541-7786.mcr-09-0178","title":"Protein Kinase G Type Iα Activity in Human Ovarian Cancer Cells Significantly Contributes to Enhanced Src Activation and DNA Synthesis/Cell Proliferation","year":2010,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Nitric Oxide and Endothelin Effects","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Proto-oncogene tyrosine-protein kinase Src; cGMP-dependent protein kinase; Biology; Cell biology; Tyrosine kinase; Small interfering RNA; Cancer research; Protein kinase R; Kinase; Autophosphorylation; Tyrosine phosphorylation; Molecular biology; Protein kinase A; Mitogen-activated protein kinase kinase; Chemistry; Signal transduction; Biochemistry; Transfection","retraction":null,"screen_n_in":null,"score":{"opus":0.02856324191131962,"gpt":0.3575667936863324,"spread":0.3290035517750128,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001004707,0.000168169,0.0002908572,0.000425672,0.0001445823,0.00007170559,0.0001132371,0.0001727782,0.0001270534],"category_scores_gemma":[0.000550825,0.00015536,0.00003416731,0.0008248558,0.00008195159,0.00009830743,0.00006670284,0.0007435345,0.00001542758],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002548708,"about_ca_system_score_gemma":0.0004633234,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003596232,"about_ca_topic_score_gemma":0.001118742,"domain_scores_codex":[0.9980252,0.0002864042,0.0001894348,0.0004788576,0.0005264416,0.0004936181],"domain_scores_gemma":[0.9988642,0.0001574221,0.00005073498,0.0003415792,0.0003854331,0.0002006225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009257821,0.0001900169,0.0006955402,0.0002264143,0.00002726989,0.00003973673,0.0001657115,0.00002308209,0.9888877,0.00009685934,0.0001179092,0.008603956],"study_design_scores_gemma":[0.001274285,0.0002421032,0.004742604,0.0002710563,0.00002045627,5.749912e-7,0.00003322352,0.0001375231,0.9926255,0.0001387797,0.0003648455,0.0001490689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9935678,0.0001049834,0.000786273,0.002199967,0.00007560536,0.002724868,0.00001141634,0.00002967558,0.0004994361],"genre_scores_gemma":[0.9972766,0.00002886084,0.0001968396,0.0001765188,0.0001322941,0.001658228,0.000005526139,0.00003995791,0.0004851775],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008454887,"threshold_uncertainty_score":0.6335395,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2082875440","doi":"10.1158/1541-7786.mcr-14-0543","title":"COX-2 Elevates Oncogenic miR-526b in Breast Cancer by EP4 Activation","year":2015,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Inflammatory mediators and NSAID effects","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"SKBR3; Cancer research; Downregulation and upregulation; Gene knockdown; microRNA; Biology; PI3K/AKT/mTOR pathway; Protein kinase B; Signal transduction; Cancer; Breast cancer; Cell biology; Cell culture; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.04903246695425778,"gpt":0.4001163361995769,"spread":0.3510838692453191,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001244439,0.0001706995,0.0002917977,0.0003022406,0.00006429131,0.00003207715,0.0001609941,0.000162595,0.0003033269],"category_scores_gemma":[0.00017167,0.0001524034,0.00006438422,0.0007921936,0.0001243719,0.0001063992,0.00007831185,0.0006484656,0.0000836023],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001132538,"about_ca_system_score_gemma":0.001208349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006212349,"about_ca_topic_score_gemma":0.000238261,"domain_scores_codex":[0.9972172,0.0002997492,0.0002363922,0.0003929558,0.001173099,0.0006805921],"domain_scores_gemma":[0.9986604,0.00006959212,0.00004769141,0.0003363994,0.0004857287,0.0004002272],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001017574,0.000170957,0.05902775,0.0001875483,0.00008015155,0.0002811429,0.0004694065,0.000049685,0.8768107,0.00006427287,0.05204796,0.009792797],"study_design_scores_gemma":[0.00515953,0.0003008228,0.0232167,0.0005776825,0.00003329965,0.00003248012,0.0002362279,0.0008371542,0.930145,0.000154026,0.03897415,0.0003328864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895023,0.003270573,0.00004194506,0.005423652,0.000164861,0.000756073,0.00003574343,0.00003547894,0.0007693686],"genre_scores_gemma":[0.9974724,0.0003375525,0.00002735582,0.0005312797,0.0002534782,0.0006024079,0.0000418329,0.00005368351,0.0006799928],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05333428,"threshold_uncertainty_score":0.9391254,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2808040230","doi":"10.1158/1541-7786.mcr-17-0681","title":"S1P Stimulates Proliferation by Upregulating CTGF Expression through S1PR2-Mediated YAP Activation","year":2018,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Johns Hopkins University; Canadian Institutes of Health Research; American Association for Cancer Research","keywords":"CTGF; Hippo signaling pathway; Cell growth; Downregulation and upregulation; Cell biology; Cancer research; Biology; Gene knockdown; Signal transduction; Growth factor; Receptor; Apoptosis","retraction":null,"screen_n_in":null,"score":{"opus":0.04596475383822941,"gpt":0.3849844331743165,"spread":0.3390196793360871,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006032761,0.0002016355,0.0001553095,0.00008011286,0.0004156723,0.0001089713,0.0002732495,0.0002752468,0.0001102894],"category_scores_gemma":[0.0003957136,0.0001909708,0.00006856918,0.0003489746,0.000222966,0.00002076584,0.0001704702,0.0002810821,0.00004722774],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007155447,"about_ca_system_score_gemma":0.0002222603,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002269534,"about_ca_topic_score_gemma":0.00001792352,"domain_scores_codex":[0.9975071,0.0003683416,0.0002604206,0.000635705,0.0006639026,0.0005645094],"domain_scores_gemma":[0.9986324,0.00003557454,0.00008327744,0.0004633121,0.0006642722,0.0001211794],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001802233,0.00005889963,0.0004957071,0.00002632006,0.00003239757,0.000002697159,0.0002704374,0.0002581228,0.9941412,0.00002784506,0.002884291,0.001621919],"study_design_scores_gemma":[0.0005613741,0.0004009393,0.00008707584,0.0001043877,0.000005756345,0.000001562318,0.00006004789,0.0009386691,0.977455,0.0002431808,0.01992127,0.0002207241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9853883,0.000878585,0.01143792,0.000448304,0.00009829299,0.0004877756,0.00003319958,0.00004391795,0.001183728],"genre_scores_gemma":[0.9969037,0.00008846215,0.0008349613,0.000279618,0.0004283451,0.000201278,0.000493957,0.00005910679,0.0007105571],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01703697,"threshold_uncertainty_score":0.7787564,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2148996678","doi":"10.1158/1541-7786.mcr-04-0211","title":"CrkI and CrkII Function as Key Signaling Integrators for Migration and Invasion of Cancer Cells","year":2005,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":71,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre; Immunovaccine (Canada)","funders":"","keywords":"Adapter molecule crk; Signal transducing adaptor protein; Gene knockdown; Cell migration; Biology; Cancer research; Cell biology; Cell; Cancer cell; Cancer; Signal transduction; Cell culture","retraction":null,"screen_n_in":null,"score":{"opus":0.05356620367687001,"gpt":0.3978477607119842,"spread":0.3442815570351142,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008833411,0.0001515424,0.0002665095,0.0003395017,0.0001469577,0.00005192812,0.00009253981,0.0001422888,0.0002520453],"category_scores_gemma":[0.0002301324,0.000132573,0.00007170215,0.0004616983,0.0002219679,0.00009429997,0.0001185667,0.0004070498,0.000007976511],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002213145,"about_ca_system_score_gemma":0.0003702688,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002751022,"about_ca_topic_score_gemma":0.001335323,"domain_scores_codex":[0.9977652,0.0001596961,0.0002835461,0.000468739,0.0008997473,0.0004230078],"domain_scores_gemma":[0.9985169,0.0001642982,0.00005985508,0.000253632,0.0007464839,0.0002588125],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009029445,0.0000686917,0.003665462,0.000349829,0.00005945497,0.00001073163,0.000254351,0.00007154091,0.9290634,0.0001239253,0.00082075,0.06460889],"study_design_scores_gemma":[0.00149925,0.0007611439,0.001582732,0.0002885425,0.00005075293,0.00000473778,0.000280599,0.002705478,0.9758514,0.0001551349,0.01669946,0.0001207374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9866862,0.007577599,0.001175716,0.003150124,0.00004659947,0.001150882,0.00001490247,0.00001729782,0.0001806845],"genre_scores_gemma":[0.9946775,0.002968473,0.0009392868,0.0002354802,0.0001304504,0.0003569087,0.00001640262,0.00004550796,0.0006299834],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06448816,"threshold_uncertainty_score":0.5406169,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2152189731","doi":"10.1158/1541-7786.mcr-07-2033","title":"MUC1 Initiates Src-CrkL-Rac1/Cdc42–Mediated Actin Cytoskeletal Protrusive Motility after Ligating Intercellular Adhesion Molecule-1","year":2008,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; Heritage Medical Research Clinic","funders":"","keywords":"Cell biology; Cytoskeleton; Motility; RAC1; Proto-oncogene tyrosine-protein kinase Src; Biology; Actin cytoskeleton; CDC42; Actin; Cancer cell; Cell adhesion; Chemistry; Kinase; Signal transduction; Cell; Cancer; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.0496016227623516,"gpt":0.3634438494893335,"spread":0.3138422267269819,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001169167,0.0004182412,0.0003553134,0.0004028693,0.0004825983,0.0001185633,0.0006886171,0.0004261029,0.0005411797],"category_scores_gemma":[0.00132126,0.0004084662,0.0002771801,0.0009405449,0.0006254011,0.00003084819,0.0008460295,0.001079862,0.0002368167],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001887536,"about_ca_system_score_gemma":0.0006852582,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005697608,"about_ca_topic_score_gemma":0.0001205436,"domain_scores_codex":[0.9944807,0.000991941,0.000528767,0.001180812,0.001555483,0.001262262],"domain_scores_gemma":[0.9971932,0.00007098672,0.0001199051,0.0009848414,0.001171382,0.0004596814],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006828874,0.0001919091,0.00404657,0.0001402967,0.00010148,0.0007271966,0.0003382397,0.00004227514,0.9911631,0.00001583668,0.0005390848,0.002011094],"study_design_scores_gemma":[0.001190879,0.0006063005,0.003306697,0.0001579192,0.00000879943,0.00006278135,0.000161126,0.0006874101,0.9873204,0.00007802995,0.006009752,0.0004098764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916487,0.003013906,0.001054484,0.0006239707,0.0000898465,0.001651501,0.00009039002,0.00005530334,0.00177184],"genre_scores_gemma":[0.9951305,0.0008680035,0.0004453359,0.000292132,0.0002412228,0.001357871,0.0003182407,0.0001126108,0.001234093],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005470668,"threshold_uncertainty_score":0.9998367,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2228251759","doi":"10.1158/1541-7786.mcr-15-0456","title":"Transcriptional Regulation of miR-31 by Oncogenic KRAS Mediates Metastatic Phenotypes by Repressing RASA1","year":2016,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"St. Michael's Hospital; Princess Margaret Cancer Centre","funders":"National Cancer Institute; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"KRAS; microRNA; Cancer research; Gene knockdown; Biology; Pancreatic cancer; Carcinogenesis; RHOA; Transcription factor; MAPK/ERK pathway; Competing endogenous RNA; Regulation of gene expression; Promoter; Effector; Cancer; Gene expression; Signal transduction; Long non-coding RNA; Cell biology; Gene; Colorectal cancer; Genetics; RNA","retraction":null,"screen_n_in":null,"score":{"opus":0.030047662101553,"gpt":0.344846996201386,"spread":0.314799334099833,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005994837,0.0001560774,0.0001757485,0.00009804115,0.00009147516,0.00002486973,0.000259195,0.000117037,0.0002033418],"category_scores_gemma":[0.0001737035,0.0001288011,0.0001214976,0.0002050938,0.0002978033,0.00001432715,0.00007466312,0.0000907725,0.00001052394],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000104696,"about_ca_system_score_gemma":0.0002887708,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001171987,"about_ca_topic_score_gemma":0.00001476366,"domain_scores_codex":[0.9978103,0.0003328068,0.0003149041,0.0004990943,0.0006691537,0.0003737318],"domain_scores_gemma":[0.9989218,0.00004600345,0.000109442,0.0004377622,0.0003569395,0.0001280174],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001907094,0.0000730231,0.0002420591,0.00005179263,0.00013726,0.000001613465,0.00002631156,0.00003816607,0.9794154,0.00008488823,0.01469019,0.00504866],"study_design_scores_gemma":[0.000809623,0.000088773,0.0008030671,0.00007055174,0.0000310119,0.000002210909,0.0000126078,0.00004385163,0.9799807,0.0006127773,0.01738843,0.00015641],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9711448,0.01814365,0.008855268,0.00089137,0.00006267815,0.0003678853,0.0003393122,0.00001218332,0.0001828636],"genre_scores_gemma":[0.9974048,0.0004621766,0.0004698687,0.00004858132,0.00007121241,0.0001221276,0.0003367223,0.00004206461,0.001042416],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02626004,"threshold_uncertainty_score":0.5252358,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2562978947","doi":"10.1158/1541-7786.mcr-16-0323-t","title":"A Systematic Analysis of Negative Growth Control Implicates the DREAM Complex in Cancer Cell Dormancy","year":2016,"lang":"en","type":"article","venue":"Molecular Cancer Research","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":70,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Children’s Health Research Institute; London Health Sciences Centre; Western University","funders":"","keywords":"Biology; Ovarian cancer; Cancer research; Cell cycle; Cell biology; Cell growth; Cancer cell; Viability assay; Programmed cell death; Cancer; Cell; Genetics; Apoptosis","retraction":null,"screen_n_in":null,"score":{"opus":0.05662686534577482,"gpt":0.3968402718138334,"spread":0.3402134064680585,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001160255,0.0001653174,0.0008267346,0.0004744949,0.00006850668,0.00001986653,0.0003065593,0.00006025538,0.0007625564],"category_scores_gemma":[0.0001754375,0.00008516795,0.0002928977,0.00217502,0.0002765096,0.0000520966,0.0000868705,0.000208086,0.00001045608],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000580297,"about_ca_system_score_gemma":0.0003759334,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03113402,"about_ca_topic_score_gemma":0.004376853,"domain_scores_codex":[0.997243,0.0004814925,0.0004974396,0.0003767834,0.0008724072,0.0005288855],"domain_scores_gemma":[0.997915,0.0005369448,0.0001542903,0.0006136234,0.0006379792,0.0001421982],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006945985,0.0003242367,0.01787095,0.006589341,0.003781918,0.00006461702,0.001271076,0.0001020421,0.9651178,0.0006214515,0.001118674,0.002443259],"study_design_scores_gemma":[0.01408331,0.0007865229,0.08680763,0.008728474,0.007334114,0.000009245146,0.001941053,0.001674092,0.8765424,0.0006019734,0.0008616413,0.0006294775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.963394,0.02060422,0.001278241,0.00827613,0.00007166333,0.003329127,0.0003696061,0.00002425317,0.002652803],"genre_scores_gemma":[0.9950601,0.002849145,0.00003859513,0.0002975638,0.00003537387,0.001339426,0.00000453235,0.0000272788,0.0003479502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08857537,"threshold_uncertainty_score":0.9753177,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}