{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":191,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":191,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"18a3e17ef234","filters":{"venue":"Mycologia"}},"results":[{"id":"W2530283331","doi":"10.3852/16-042","title":"A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data","year":2016,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":1308,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa; University of British Columbia","funders":"U.S. Department of Agriculture; National Institutes of Health; Agence Nationale de la Recherche; National Science Foundation","keywords":"Biology; Phylum; Ascomycota; Phylogenetic tree; Phylogenetics; Clade; Monophyly; Botany; Evolutionary biology; Zoology; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.06727296401792456,"gpt":0.2461595452126464,"spread":0.1788865811947218,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000209685,0.0001203996,0.0001557317,0.00003041953,0.00008960885,0.0000159522,0.0005377574,0.0001043885,0.005373473],"category_scores_gemma":[0.0001642269,0.00003895185,0.00005634206,0.0002724389,0.00001802303,0.00007158431,0.00007971449,0.00007052919,0.0007264913],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002272065,"about_ca_system_score_gemma":0.00001763627,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007837635,"about_ca_topic_score_gemma":0.0001152741,"domain_scores_codex":[0.9989597,0.00009049872,0.0002213575,0.0003541032,0.0001615202,0.0002128578],"domain_scores_gemma":[0.9979194,0.001585753,0.0001267774,0.0002413917,0.00005944222,0.00006720754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007868509,0.000114268,0.0260968,0.000004027797,0.000006892864,0.00000136461,0.000004336493,0.000005756263,0.9396158,0.0002075037,0.003965656,0.02989893],"study_design_scores_gemma":[0.0001311197,0.0008375298,0.894462,0.00006012998,0.00002674252,0.000006070315,0.00003747484,0.0012771,0.01220583,0.0002063925,0.09051573,0.0002338436],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9814687,0.0001121773,0.0002490863,0.001057688,0.0002336266,0.0002695111,0.009783969,0.00005879137,0.006766445],"genre_scores_gemma":[0.9971297,0.0001479516,0.0003357593,0.0002422954,0.0001519638,0.000015564,0.001339382,0.000001105081,0.0006362716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9274099,"threshold_uncertainty_score":0.9955357,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2154306114","doi":"10.1080/15572536.2003.11833196","title":"A multilocus gene genealogy concordant with host preference indicates segregation of a new species,<i>Magnaporthe oryzae</i>, from<i>M. grisea</i>","year":2002,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":533,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Magnaporthe grisea; Magnaporthe; Clade; Botany; Digitaria; Oryza sativa; Host (biology); Oryza; Genetics; Gene; Phylogenetic tree","retraction":null,"screen_n_in":null,"score":{"opus":0.0270439635790782,"gpt":0.2024900216746769,"spread":0.1754460580955987,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005272205,0.000205275,0.0002429275,0.00003600898,0.00005933404,0.00001681168,0.0002371452,0.000163352,0.0003303518],"category_scores_gemma":[0.00006374786,0.0001586156,0.00006428787,0.0001180375,0.0001369985,0.000005861038,0.00008042262,0.00008425374,0.00002896676],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001263344,"about_ca_system_score_gemma":0.00008429346,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001961107,"about_ca_topic_score_gemma":0.0001303779,"domain_scores_codex":[0.9988593,0.0000563167,0.0002495848,0.0004152421,0.0001550581,0.0002644906],"domain_scores_gemma":[0.9992262,0.00003155372,0.0002115492,0.0003007248,0.00007646545,0.000153493],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001828016,0.0001494448,0.04656934,0.000009220537,0.00007212615,0.00002200096,0.00004355266,0.00001430053,0.9310622,0.00001081103,0.02083541,0.001028846],"study_design_scores_gemma":[0.001684063,0.001385484,0.1486174,0.00002744502,0.0001305294,0.00003184794,0.00006513207,0.000181722,0.8234414,0.00004365445,0.02394736,0.0004439765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921838,0.003592267,0.000747416,0.0000536774,0.00006025975,0.0002724461,0.002163894,0.00002172273,0.0009045258],"genre_scores_gemma":[0.9944306,0.001128954,0.00169594,0.0002825762,0.0001023128,0.00002740426,0.0009675928,0.0000184093,0.001346188],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1076208,"threshold_uncertainty_score":0.6468154,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2142274926","doi":"10.3852/mycologia.98.6.982","title":"Major clades of Agaricales: a multilocus phylogenetic overview","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":504,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto; Royal Ontario Museum","funders":"","keywords":"Agaricales; Clade; Biology; Evolutionary biology; Agaricomycetes; Phylogenetics; Phylogenetic tree; Zoology; Taxonomy (biology); Botany; Genetics; Basidiomycota; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01212762404077752,"gpt":0.2391833066765756,"spread":0.2270556826357981,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005909482,0.0001205861,0.000157862,0.00003042211,0.00003690039,0.000007424543,0.0001477984,0.0001299863,0.00005207744],"category_scores_gemma":[0.00004728787,0.0001019058,0.0001080147,0.00007955469,0.00007521742,0.000001072057,0.00007404485,0.00003863022,0.00001697715],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005997603,"about_ca_system_score_gemma":0.00003457283,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003968241,"about_ca_topic_score_gemma":0.00003430502,"domain_scores_codex":[0.9992528,0.0000459584,0.0001912308,0.000232242,0.0000840206,0.0001937815],"domain_scores_gemma":[0.9995981,0.00001793793,0.00007558267,0.0002181075,0.00004643248,0.00004376764],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004844632,0.0001539874,0.03017603,0.0000377329,0.00002208929,0.00001671252,0.000001887809,0.00003392272,0.9656448,0.0001695543,0.002957661,0.0007371493],"study_design_scores_gemma":[0.0006785067,0.0004614479,0.766858,0.00002618699,0.00007987615,0.00003257892,0.00001860189,0.00005717176,0.20695,0.0003085769,0.02422688,0.0003021862],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874033,0.00938081,0.0002009983,0.00001756687,0.0000579374,0.0001452349,0.000437503,0.00001338431,0.002343253],"genre_scores_gemma":[0.997922,0.000330591,0.0008627132,0.0001402948,0.0001111273,0.00002047807,0.0001890453,0.00001065443,0.0004131146],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7586948,"threshold_uncertainty_score":0.4155599,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2170817105","doi":"10.3852/mycologia.98.6.838","title":"Dating divergences in the Fungal Tree of Life: review and new analyses","year":2006,"lang":"en","type":"review","venue":"Mycologia","topic":"Plant Diversity and Evolution","field":"Agricultural and Biological Sciences","cited_by":395,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Ascomycota; Biology; Basidiomycota; Taxon; Divergence (linguistics); Phylogenetic tree; Tree of life (biology); Ecology; Evolutionary biology; Botany; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.2472353807748137,"gpt":0.3372259741353409,"spread":0.0899905933605272,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003609097,0.000135983,0.0006963217,0.00001584538,0.0000879514,0.00001633455,0.000357991,0.0001306714,0.0001728565],"category_scores_gemma":[0.0001454815,0.00003724666,0.0001336917,0.000489263,0.00004578939,0.00005621316,0.00009840629,0.0001445037,0.00001038147],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001090547,"about_ca_system_score_gemma":0.00002152564,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001207643,"about_ca_topic_score_gemma":0.001366388,"domain_scores_codex":[0.9990209,0.0002463674,0.000288045,0.0001859891,0.0001206355,0.0001380797],"domain_scores_gemma":[0.9992465,0.0004295325,0.0002425491,0.00003873915,0.00001280566,0.00002983095],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000001872839,0.00003019308,0.002459372,0.002820383,0.00002701916,0.000006470897,0.000007574231,2.888244e-7,0.000009851058,0.00002675871,0.04159816,0.953012],"study_design_scores_gemma":[0.0000326249,0.00009527244,0.04152154,0.003744096,0.0007044888,0.00001176006,0.00005295711,0.000001219194,2.039339e-7,0.00003891965,0.9536229,0.0001740331],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001041467,0.9975399,1.591714e-7,0.00009899228,0.00003440663,0.0002597908,0.00008742749,0.000008899287,0.0009289188],"genre_scores_gemma":[0.0004687537,0.9990159,0.00001721505,0.0001165844,0.00007844497,0.00000484835,0.0001956444,2.225833e-7,0.0001023984],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.952838,"threshold_uncertainty_score":0.1892657,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2155113087","doi":"10.3852/mycologia.98.6.1018","title":"A five-gene phylogeny of Pezizomycotina","year":2006,"lang":"es","type":"article","venue":"Mycologia","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":318,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brandon University","funders":"","keywords":"Dothideomycetes; Monophyly; Biology; Polyphyly; Paraphyly; Maximum parsimony; Evolutionary biology; Phylogenetics; Clade; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.009113649917911802,"gpt":0.20652328729761,"spread":0.1974096373796982,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002904777,0.0002541841,0.0004800015,0.0000315596,0.0001754786,0.00004530595,0.0004550964,0.0004131545,0.002207569],"category_scores_gemma":[0.00009615906,0.0001111234,0.0002242625,0.0004894051,0.0003021225,0.00006255019,0.0002034161,0.0001977089,0.0003489664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004130071,"about_ca_system_score_gemma":0.00002894519,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001529372,"about_ca_topic_score_gemma":0.0002787315,"domain_scores_codex":[0.9981777,0.0001798252,0.0004809402,0.0004370049,0.0001838519,0.000540698],"domain_scores_gemma":[0.9989998,0.0003745837,0.0002921723,0.0001168593,0.0001344955,0.00008209598],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000658085,0.0004577083,0.1728105,0.00003087283,0.00003157939,0.00002563802,0.00002856445,0.00001448914,0.8079486,0.0072979,0.007737348,0.003550985],"study_design_scores_gemma":[0.0002503519,0.001042952,0.9514493,0.00001340954,0.00004585704,0.00001440789,0.0000971374,0.00003690886,0.02998678,0.001128147,0.01568551,0.0002492141],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9811564,0.0009259512,0.00000175413,0.0007327416,0.0004105887,0.0002895021,0.0001894293,0.00005771422,0.01623588],"genre_scores_gemma":[0.9949647,0.0001186307,0.0002168656,0.0002934105,0.0007513391,0.00001771878,0.00008315466,0.000002376275,0.003551766],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7786388,"threshold_uncertainty_score":0.9987046,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2149184690","doi":"10.3852/mycologia.98.6.1076","title":"An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":315,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Hypocreales; Monophyly; Paraphyly; Incertae sedis; Systematics; Dothideomycetes; Clade; Zoology; Botany; Ascomycota; Phylogenetics; Taxonomy (biology); Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02318859029188682,"gpt":0.2445681285142277,"spread":0.2213795382223409,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001448372,0.0001015606,0.0001540129,0.00001492854,0.00005829848,0.000006036002,0.0003372951,0.00009065207,0.000008951777],"category_scores_gemma":[0.00007796736,0.00005351426,0.0001594896,0.0001051575,0.00008156951,9.763493e-7,0.00006074535,0.00003936479,9.67079e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006451423,"about_ca_system_score_gemma":0.0000743577,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002410821,"about_ca_topic_score_gemma":0.00003350139,"domain_scores_codex":[0.9992331,0.0001591049,0.0002063026,0.0001431431,0.0001378525,0.0001204918],"domain_scores_gemma":[0.9991676,0.00003117664,0.0001776915,0.0005438325,0.00005980816,0.00001987704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002798728,0.0001403737,0.04191425,0.0001367813,0.00001474029,9.27312e-7,0.000002265668,0.001027002,0.9559804,0.000282337,0.0004404576,0.00003250964],"study_design_scores_gemma":[0.0002390348,0.0002577644,0.5404885,0.00009007966,0.0000640081,0.000004340274,0.0000114157,0.0007066424,0.4575689,0.0000938775,0.0003816184,0.00009377868],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973565,0.0009013793,0.00005741924,0.00002522828,0.0001011529,0.0002625745,0.0007208514,0.000004266837,0.0005706653],"genre_scores_gemma":[0.9994253,0.00002016363,0.0001715692,0.0002215092,0.00004829591,0.00001499391,0.00003875449,0.000007758732,0.0000516462],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4985743,"threshold_uncertainty_score":0.2182248,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2111276348","doi":"10.3852/mycologia.98.6.1041","title":"A multigene phylogeny of the Dothideomycetes using four nuclear loci","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":304,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Dothideomycetes; Biology; Clade; Phylogenetics; Evolutionary biology; Taxon; Botany; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01233258875722457,"gpt":0.2112596122432751,"spread":0.1989270234860505,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006327328,0.00009616412,0.0001035501,0.00001622058,0.00008488987,0.000008533632,0.0001842587,0.0001045973,0.00002812505],"category_scores_gemma":[0.00005603883,0.00006767087,0.0001179385,0.00007101867,0.00008420474,0.000001348853,0.0001136435,0.00004180093,0.000004760101],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007764505,"about_ca_system_score_gemma":0.00003467944,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000669259,"about_ca_topic_score_gemma":0.00002106512,"domain_scores_codex":[0.9994012,0.00004647339,0.00013755,0.0001715635,0.00007770448,0.0001655714],"domain_scores_gemma":[0.9996017,0.00001011889,0.00008463831,0.0002334981,0.00004508158,0.0000249716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000283013,0.00004886529,0.0199894,0.00000943241,0.00001746,0.00000433118,0.000003147022,0.0002908281,0.9780189,0.00008158542,0.001403555,0.000104155],"study_design_scores_gemma":[0.0003233765,0.00009971619,0.7346033,0.00001087823,0.00004564573,0.00002716264,0.00002489934,0.0004767163,0.2554716,0.0001030465,0.008644967,0.0001685924],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998215,0.0004783482,0.00006347099,0.000008292795,0.00007830055,0.000116114,0.0002652135,0.000008375775,0.0007668597],"genre_scores_gemma":[0.9985104,0.00002105636,0.0009906917,0.0001639003,0.0001336138,0.000003073842,0.00003027344,0.00001181028,0.0001352183],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7225473,"threshold_uncertainty_score":0.2759538,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4242930767","doi":"10.1080/15572536.2006.11832635","title":"An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":275,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Hypocreales; Monophyly; Incertae sedis; Dothideomycetes; Ascomycota; Systematics; Paraphyly; Sister group; Clade; Zoology; Botany; Phylogenetics; Taxon; Taxonomy (biology); Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02318859029188682,"gpt":0.2445681285142277,"spread":0.2213795382223409,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001448372,0.0001015606,0.0001540129,0.00001492854,0.00005829848,0.000006036002,0.0003372951,0.00009065207,0.000008951777],"category_scores_gemma":[0.00007796736,0.00005351426,0.0001594896,0.0001051575,0.00008156951,9.763493e-7,0.00006074535,0.00003936479,9.67079e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006451423,"about_ca_system_score_gemma":0.0000743577,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002410821,"about_ca_topic_score_gemma":0.00003350139,"domain_scores_codex":[0.9992331,0.0001591049,0.0002063026,0.0001431431,0.0001378525,0.0001204918],"domain_scores_gemma":[0.9991676,0.00003117664,0.0001776915,0.0005438325,0.00005980816,0.00001987704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002798728,0.0001403737,0.04191425,0.0001367813,0.00001474029,9.27312e-7,0.000002265668,0.001027002,0.9559804,0.000282337,0.0004404576,0.00003250964],"study_design_scores_gemma":[0.0002390348,0.0002577644,0.5404885,0.00009007966,0.0000640081,0.000004340274,0.0000114157,0.0007066424,0.4575689,0.0000938775,0.0003816184,0.00009377868],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973565,0.0009013793,0.00005741924,0.00002522828,0.0001011529,0.0002625745,0.0007208514,0.000004266837,0.0005706653],"genre_scores_gemma":[0.9994253,0.00002016363,0.0001715692,0.0002215092,0.00004829591,0.00001499391,0.00003875449,0.000007758732,0.0000516462],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4985743,"threshold_uncertainty_score":0.2182248,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2108232020","doi":"10.3852/mycologia.98.6.1088","title":"New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":261,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Museum of Nature","funders":"National Science Foundation","keywords":"Biology; Monophyly; Phylogenetic tree; Taxon; Evolutionary biology; Supermatrix; Phylogenetics; Dothideomycetes; Botany; Genetics; Gene; Clade","retraction":null,"screen_n_in":null,"score":{"opus":0.02575446970581066,"gpt":0.2345271422298937,"spread":0.2087726725240831,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009527913,0.0001266212,0.0002336437,0.00002148221,0.0001571928,0.00002165363,0.0001903019,0.0001207508,0.0000467469],"category_scores_gemma":[0.00005929075,0.00004805317,0.00005403205,0.000281991,0.0001846172,0.00006923245,0.0001297607,0.00007741849,0.000001308106],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003105506,"about_ca_system_score_gemma":0.00002490245,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01000656,"about_ca_topic_score_gemma":0.01123827,"domain_scores_codex":[0.9990433,0.0001151545,0.0003034475,0.0002665006,0.0001203542,0.0001512053],"domain_scores_gemma":[0.999339,0.0002055926,0.0002643724,0.00007872928,0.00007232059,0.00003991455],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001306243,0.00002128215,0.3725611,0.000005464896,0.00001122781,1.93665e-7,0.00002081758,0.000004363153,0.6212423,0.001257237,0.00001548278,0.004847466],"study_design_scores_gemma":[0.0001705637,0.0001810419,0.8442517,0.00001497238,0.00003772917,9.257464e-7,0.00006526339,0.0002530544,0.144405,0.01046144,0.00007480635,0.00008350531],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963013,0.002750318,0.00005312651,0.0002444744,0.00006028263,0.0003011709,0.00001028738,0.00001690853,0.0002621405],"genre_scores_gemma":[0.9989049,0.00003282545,0.000846942,0.00001579789,0.0001377473,0.00001397384,0.00001194461,0.000001054928,0.00003482935],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4768373,"threshold_uncertainty_score":0.9965859,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2121382857","doi":"10.3852/mycologia.98.6.926","title":"Hymenochaetales: a molecular phylogeny for the hymenochaetoid clade","year":2006,"lang":"es","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":201,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Artdatabanken, Sveriges Lantbruksuniversitet; National Science Foundation","keywords":"Biology; Clade; Synapomorphy; Botany; Basidiocarp; Molecular phylogenetics; Phylogenetic tree; Zoology; Subclade; Taxonomy (biology)","retraction":null,"screen_n_in":null,"score":{"opus":0.009833386083637303,"gpt":0.2214697314897127,"spread":0.2116363454060754,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002521874,0.0003445878,0.0003214061,0.00002820626,0.0007709147,0.0002586704,0.0006184559,0.0003019962,0.003937773],"category_scores_gemma":[0.0001942061,0.0001277136,0.0003741017,0.0003670766,0.00006662271,0.00008318507,0.0001236982,0.0002830118,0.001026205],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005045366,"about_ca_system_score_gemma":0.00002415245,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00155034,"about_ca_topic_score_gemma":0.0001367856,"domain_scores_codex":[0.9980668,0.0001270609,0.0004089342,0.0005033105,0.0002264617,0.0006674181],"domain_scores_gemma":[0.9950194,0.004401462,0.0002040221,0.0001754299,0.000114713,0.00008501517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001658528,0.0002527324,0.005726519,0.00003613203,0.0001157872,0.00003030946,0.00003217484,0.00019704,0.8056688,0.077878,0.1023208,0.007575822],"study_design_scores_gemma":[0.0001948011,0.001010502,0.03352176,0.00007994121,0.0002611617,0.00009473013,0.0003782898,0.001076049,0.01849162,0.01028943,0.9339768,0.0006248808],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9384613,0.02095949,0.001108006,0.009912549,0.002211243,0.002681725,0.007513572,0.0002272528,0.01692488],"genre_scores_gemma":[0.9911127,0.001332899,0.0002416871,0.001314028,0.001414534,0.000274452,0.001096271,0.000005590713,0.003207803],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.831656,"threshold_uncertainty_score":0.9997516,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2134285853","doi":"10.3852/mycologia.98.6.1053","title":"Eurotiomycetes: Eurotiomycetidae and Chaetothyriomycetidae","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":199,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brandon University","funders":"National Science Foundation","keywords":"Biology; Dothideomycetes; Ascocarp; Marine fungi; Ascomycota; Monophyly; Clade; Sister group; Botany; Phylogenetic tree; Genetics; Taxonomy (biology); Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.004097979094757815,"gpt":0.1496903922550016,"spread":0.1455924131602438,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002093991,0.0001674626,0.0001994146,0.00001991256,0.0002203001,0.00006445264,0.0001869152,0.0001470137,0.001085762],"category_scores_gemma":[0.0000573349,0.00006657778,0.00005593024,0.0003098407,0.0001311349,0.00009593726,0.0001227398,0.0001377124,0.0002494452],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001825936,"about_ca_system_score_gemma":0.000005740004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003333548,"about_ca_topic_score_gemma":0.0004071794,"domain_scores_codex":[0.9988227,0.00009445337,0.000215359,0.0003674933,0.0001137674,0.0003862217],"domain_scores_gemma":[0.9994962,0.00023826,0.00007355851,0.00005863917,0.00005106161,0.00008234482],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003681609,0.0001809369,0.4767456,0.00001022348,0.00001355501,0.00005290952,0.00002804554,0.000003514319,0.4854147,0.009093059,0.009790399,0.01863017],"study_design_scores_gemma":[0.0001685867,0.0002948805,0.9495562,0.000003340225,0.000008378776,0.00004373137,0.00003596175,0.00002898875,0.001411147,0.001491894,0.04677097,0.000185871],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9752387,0.0002342657,0.000003786284,0.001529211,0.0001675582,0.0002333874,0.00002226716,0.000196412,0.0223744],"genre_scores_gemma":[0.9972292,0.00002617543,0.0001884815,0.0008237633,0.0004146577,0.00003265455,0.00004376162,0.000001451574,0.001239874],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4840036,"threshold_uncertainty_score":0.9998274,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2148000872","doi":"10.3852/mycologia.98.6.937","title":"The cantharelloid clade: dealing with incongruent gene trees and phylogenetic reconstruction methods","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":151,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"","keywords":"Biology; Clade; Phylogenetic tree; Phylogenetics; Evolutionary biology; Cladistics; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.008045139673868787,"gpt":0.2210401054350972,"spread":0.2129949657612284,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001598666,0.00009627877,0.00009607749,0.000008169715,0.0004466492,0.00007751763,0.00008990469,0.00006385299,0.0004199813],"category_scores_gemma":[0.00003067188,0.00002826277,0.00002618138,0.0001145547,0.00002743173,0.0000372757,0.00002531849,0.0001026049,0.0000184712],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001554119,"about_ca_system_score_gemma":0.000005137114,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002987958,"about_ca_topic_score_gemma":0.005863035,"domain_scores_codex":[0.9993393,0.0001012801,0.0001395484,0.0001766999,0.00006329193,0.0001798094],"domain_scores_gemma":[0.9984809,0.001337446,0.0000707502,0.00003745738,0.00003520789,0.00003821027],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005386253,0.00001519632,0.07677108,0.000001437019,0.00001433951,0.000004710854,0.000006842706,0.00005342329,0.71942,0.0008067592,0.0007240437,0.2021284],"study_design_scores_gemma":[0.000164827,0.0008724441,0.6575708,0.00005282991,0.0000911474,0.001111878,0.0005623973,0.001046583,0.09210775,0.004616955,0.2412553,0.0005470922],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950345,0.001308614,0.00005801283,0.0004291982,0.0002401159,0.0001463423,0.00009755493,0.00004107005,0.002644575],"genre_scores_gemma":[0.9950262,0.001114042,0.003191462,0.0000763124,0.0001941164,0.00002253012,0.00009018611,8.446913e-7,0.0002842754],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6273122,"threshold_uncertainty_score":0.4598501,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4253413107","doi":"10.1080/15572536.2006.11832622","title":"Hymenochaetales: a molecular phylogeny for the hymenochaetoid clade","year":2006,"lang":"es","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":143,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Artdatabanken, Sveriges Lantbruksuniversitet; National Science Foundation","keywords":"Biology; Clade; Synapomorphy; Botany; Basidiocarp; Molecular phylogenetics; Zoology; Phylogenetic tree; Subclade; Taxonomy (biology)","retraction":null,"screen_n_in":null,"score":{"opus":0.009833386083637303,"gpt":0.2214697314897127,"spread":0.2116363454060754,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0002521874,0.0003445878,0.0003214061,0.00002820626,0.0007709147,0.0002586704,0.0006184559,0.0003019962,0.003937773],"category_scores_gemma":[0.0001942061,0.0001277136,0.0003741017,0.0003670766,0.00006662271,0.00008318507,0.0001236982,0.0002830118,0.001026205],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005045366,"about_ca_system_score_gemma":0.00002415245,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00155034,"about_ca_topic_score_gemma":0.0001367856,"domain_scores_codex":[0.9980668,0.0001270609,0.0004089342,0.0005033105,0.0002264617,0.0006674181],"domain_scores_gemma":[0.9950194,0.004401462,0.0002040221,0.0001754299,0.000114713,0.00008501517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001658528,0.0002527324,0.005726519,0.00003613203,0.0001157872,0.00003030946,0.00003217484,0.00019704,0.8056688,0.077878,0.1023208,0.007575822],"study_design_scores_gemma":[0.0001948011,0.001010502,0.03352176,0.00007994121,0.0002611617,0.00009473013,0.0003782898,0.001076049,0.01849162,0.01028943,0.9339768,0.0006248808],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9384613,0.02095949,0.001108006,0.009912549,0.002211243,0.002681725,0.007513572,0.0002272528,0.01692488],"genre_scores_gemma":[0.9911127,0.001332899,0.0002416871,0.001314028,0.001414534,0.000274452,0.001096271,0.000005590713,0.003207803],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.831656,"threshold_uncertainty_score":0.9997516,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2037154535","doi":"10.3852/mycologia.98.6.1006","title":"Phylogenetics of Saccharomycetales, the ascomycete yeasts","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":128,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Agricultural Research Service; National Science Foundation","keywords":"Biology; Ascomycota; Phylogenetics; Phylogenetic tree; Lineage (genetic); Monophyly; Evolutionary biology; Phylum; Synapomorphy; Zoology; Botany; Genetics; Clade; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.006746467093591372,"gpt":0.216241745241687,"spread":0.2094952781480956,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107667,0.0001061179,0.0001209578,0.0000166306,0.00007904247,0.000007448728,0.0001959355,0.00008805071,0.00003849562],"category_scores_gemma":[0.00002769425,0.00006661929,0.00008079296,0.00006978861,0.0001585455,6.632895e-7,0.0001431029,0.00005197512,0.0000176654],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004523612,"about_ca_system_score_gemma":0.00002527791,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003512944,"about_ca_topic_score_gemma":0.00004660898,"domain_scores_codex":[0.9993711,0.00003584021,0.000159795,0.0001664599,0.00008827094,0.0001784929],"domain_scores_gemma":[0.9995636,0.00001544088,0.0000778084,0.0002679955,0.00005840338,0.00001675589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003755996,0.00008402092,0.05098553,0.0000159539,0.00007757973,0.000003299192,0.00001686989,0.0001207934,0.9156461,0.001112738,0.03037753,0.001522053],"study_design_scores_gemma":[0.0005899488,0.0004643771,0.4768876,0.00001145211,0.00006378377,0.00002880467,0.0001002214,0.00002576645,0.3523813,0.0004915482,0.1686672,0.0002879545],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9876027,0.003154769,0.0001245355,0.0001620447,0.0001677542,0.0001511061,0.00002853288,0.000009457104,0.008599076],"genre_scores_gemma":[0.997617,0.0001721044,0.0004018678,0.0001148222,0.0002652718,0.00001370686,0.00002831889,0.00001045532,0.001376475],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5632647,"threshold_uncertainty_score":0.2716656,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2156670992","doi":"10.1080/15572536.2005.11832922","title":"Phylogenetic analysis of<i>Ganoderma</i>based on nearly complete mitochondrial small-subunit ribosomal DNA sequences","year":2004,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":120,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"Ministry of Education and Human Resources Development","keywords":"Biology; Monophyly; Phylogenetic tree; Ganoderma; Subgenus; Botany; Phylogenetics; Ribosomal DNA; Taxonomy (biology); Clade; Genetics; Ganoderma lucidum; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02209843336266944,"gpt":0.213765236332183,"spread":0.1916668029695136,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00009289512,0.000187021,0.0003505952,0.0000846438,0.0002025699,0.00005504789,0.0003539323,0.000141349,0.003073171],"category_scores_gemma":[0.0001220973,0.00007944153,0.0002821662,0.001159176,0.00003479387,0.00004579509,0.00003416619,0.0001645488,0.0002607422],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003657574,"about_ca_system_score_gemma":0.00002626637,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001818462,"about_ca_topic_score_gemma":0.001441006,"domain_scores_codex":[0.9987088,0.0001159953,0.0003052524,0.000339484,0.000222636,0.0003078461],"domain_scores_gemma":[0.9982815,0.00127345,0.0001541847,0.0001052197,0.0000850902,0.0001005849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001863672,0.0002196064,0.03973309,0.000004914106,0.000183059,0.00002549047,0.00004115712,0.01123084,0.9459613,0.0006656547,0.0003577462,0.001390751],"study_design_scores_gemma":[0.0008574217,0.005124293,0.8709972,0.0001475136,0.001841674,0.00003549927,0.0003297701,0.009734899,0.07866702,0.00225576,0.02864155,0.001367383],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945745,0.00006431851,0.00007060116,0.000499625,0.0003412924,0.0002140795,0.001869555,0.00006445561,0.002301601],"genre_scores_gemma":[0.9971985,0.00003012112,0.0005446845,0.0006924107,0.0001715916,0.00002094217,0.001279271,0.000001137143,0.00006133052],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8672943,"threshold_uncertainty_score":0.9978381,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1971294916","doi":"10.1080/00275514.2000.12061187","title":"Comparison of AFLP fingerprints and ITS sequences as phylogenetic markers in Ustilaginomycetes","year":2000,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":118,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Amplified fragment length polymorphism; Phylogenetic tree; Evolutionary biology; Phylogenetics; DNA profiling; Genetics; Computational biology; Genetic diversity; Gene; DNA","retraction":null,"screen_n_in":null,"score":{"opus":0.01500916855605132,"gpt":0.2758539651232412,"spread":0.2608447965671899,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007877686,0.00009830658,0.000155491,0.00003418355,0.00002504583,0.000007557086,0.000106099,0.00009792547,0.0002012882],"category_scores_gemma":[0.00005798931,0.00009056338,0.0000301979,0.00006527868,0.00006093616,0.000002035911,0.00003959728,0.00004580509,0.00001379876],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004780622,"about_ca_system_score_gemma":0.0000353312,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001675566,"about_ca_topic_score_gemma":0.00001884977,"domain_scores_codex":[0.9993449,0.00004888747,0.0001612816,0.0002218296,0.00006019726,0.00016284],"domain_scores_gemma":[0.999763,0.00002258861,0.00004161971,0.0001038443,0.00001882715,0.00005013244],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000102884,0.00005438627,0.298594,0.00001907255,0.00001129381,0.000008508907,0.00001787942,0.0001194684,0.697593,0.00001065141,0.000124352,0.003344473],"study_design_scores_gemma":[0.000283693,0.0003845574,0.8644567,0.00002476503,0.00001775281,0.00001326327,0.00006930308,0.0003090051,0.1328713,0.00004434293,0.001366625,0.0001586417],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934899,0.003377996,0.000001269519,0.00001411075,0.00002480591,0.0001152131,0.00009144497,0.000004950566,0.002880281],"genre_scores_gemma":[0.9989169,0.0005956574,0.0001253295,0.00007806043,0.00001953167,0.00001209307,0.00003734887,0.000005190929,0.0002098637],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5658627,"threshold_uncertainty_score":0.3693067,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2141027040","doi":"10.3852/11-375","title":"Taxonomic revision of true morels ( <i>Morchella</i> ) in Canada and the United States","year":2012,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":102,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Phylogenetic tree; Nomen dubium; Octocorallia; Taxonomy (biology); Botany; Clade; Ecology","retraction":null,"screen_n_in":null,"score":{"opus":0.01152094414331969,"gpt":0.1881896130542989,"spread":0.1766686689109792,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000251075,0.00005833116,0.0001200743,0.000009223872,0.00004618784,0.000007322847,0.00008979278,0.00002890417,0.0007531376],"category_scores_gemma":[0.0001154301,0.00001698898,0.00001843001,0.0001779894,0.00001270937,0.00003960679,0.00003489281,0.00009088348,0.0000128345],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003385447,"about_ca_system_score_gemma":0.00001355172,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9082425,"about_ca_topic_score_gemma":0.5421639,"domain_scores_codex":[0.9994717,0.0001087214,0.0001468388,0.00006892945,0.00005292,0.0001508382],"domain_scores_gemma":[0.9974876,0.002367976,0.00006050623,0.00002948708,0.00001528251,0.00003914159],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002169553,0.00003993949,0.9469615,0.00001116789,0.00001145171,0.000002400772,0.0001394144,0.0001277945,0.0114704,0.002052401,0.03104698,0.007919649],"study_design_scores_gemma":[0.0003394479,0.000140459,0.5508507,0.00008189261,0.00002722704,0.00003707941,0.002251139,0.001432745,0.00361454,0.00044903,0.4405009,0.0002748268],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980291,0.0004245063,7.502638e-7,0.0004757952,0.0001135919,0.0001374436,0.0002026036,0.000004859048,0.000611356],"genre_scores_gemma":[0.9978208,0.001400213,0.00002059987,0.0004602468,0.00003864499,0.00000422215,0.0002081828,2.707375e-7,0.00004684985],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4094539,"threshold_uncertainty_score":0.8246328,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2130763234","doi":"10.3852/08-120","title":"Melanin synthesis by Sclerotinia sclerotiorum","year":2009,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":93,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Sclerotinia sclerotiorum; Mycelium; Melanin; Biology; Fungus; Hypha; Chrysosporium; Phanerochaete; Microbiology; Botany; Biochemistry; Enzyme","retraction":null,"screen_n_in":null,"score":{"opus":0.01149333440022367,"gpt":0.1849108534878717,"spread":0.173417519087648,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002152311,0.0001404882,0.0001816003,0.000008550074,0.000225843,0.00005157841,0.000266353,0.0001399771,0.001459229],"category_scores_gemma":[0.00005104237,0.00004879423,0.00007609114,0.0002148924,0.00002558067,0.00005702616,0.00002543284,0.00009584428,0.0002794311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001949696,"about_ca_system_score_gemma":0.000003486971,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001499118,"about_ca_topic_score_gemma":0.00006434942,"domain_scores_codex":[0.9989807,0.0000520282,0.000161081,0.000280558,0.0001620481,0.0003635819],"domain_scores_gemma":[0.9996481,0.0001116094,0.00006660847,0.00005358908,0.00002580392,0.00009426914],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001566036,0.0000717502,0.0005883936,6.569397e-7,0.000003741455,0.000008821986,0.000003621209,6.263707e-7,0.9317232,0.0004292602,0.02617814,0.04097614],"study_design_scores_gemma":[0.0001934279,0.0009009125,0.6777637,0.00005374625,0.00002855658,0.00002458688,0.000168128,0.00005428162,0.2214413,0.001759857,0.0969813,0.00063014],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911035,0.0001597775,0.00001529328,0.002444163,0.0001198424,0.0001754554,0.0001601988,0.0001694954,0.005652272],"genre_scores_gemma":[0.997334,0.00005015817,0.0002358138,0.001099388,0.00009146109,0.00001688455,0.00003753157,5.975746e-7,0.00113416],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7102818,"threshold_uncertainty_score":0.9994535,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4231143468","doi":"10.2307/3761678","title":"Life-History Strategies of Arbuscular Mycorrhizal Fungi in Relation to Their Successional Dynamics","year":2001,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":88,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Ecological succession; Arbuscular mycorrhizal fungi; Context (archaeology); Ecosystem; Ecology; Colonization; Arbuscular mycorrhizal; Life history; Life history theory; Symbiosis; Community","retraction":null,"screen_n_in":null,"score":{"opus":0.01576813583506623,"gpt":0.2104215741867873,"spread":0.1946534383517211,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001879698,0.0001198464,0.0001782973,0.00004706573,0.00005571797,0.00001679936,0.0001961463,0.0001356325,0.005833642],"category_scores_gemma":[0.0002562562,0.00005035924,0.00007337482,0.0003417617,0.000008308029,0.0001744483,0.00004706118,0.0001695775,0.0001747135],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001226411,"about_ca_system_score_gemma":0.00004608732,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00106384,"about_ca_topic_score_gemma":0.001325547,"domain_scores_codex":[0.9990994,0.00008164237,0.0002672262,0.0002092177,0.0001332238,0.0002092515],"domain_scores_gemma":[0.9987646,0.0009258272,0.00008565287,0.00005554932,0.00005758717,0.0001108041],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002620863,0.0002184651,0.8418193,0.000009912624,0.00001411904,0.00002591882,0.0001745214,0.001438388,0.1244124,0.01624994,0.0112368,0.004138148],"study_design_scores_gemma":[0.00005336681,0.0002832161,0.9381377,0.00006026573,0.000007508972,0.00001957936,0.001153409,0.002502267,0.0001376653,0.001232784,0.05622444,0.0001878679],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9843153,0.0005130052,0.00006930711,0.0003756598,0.0004262135,0.0001771259,0.0002358428,0.00004219157,0.01384533],"genre_scores_gemma":[0.9981974,0.0003447955,0.00009860603,0.0002593963,0.0001067449,0.00001804702,0.0006553692,9.850319e-7,0.0003186168],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1242747,"threshold_uncertainty_score":0.9950752,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2168145862","doi":"10.1080/15572536.2005.11833010","title":"Cretaceous and Eocene poroid hymenophores from Vancouver Island, British Columbia","year":2004,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":86,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Alberta","funders":"","keywords":"Hymenium; Basidium; Basidiocarp; Biology; Botany; Agaricomycetes; Hypha; Taxonomy (biology); Basidiomycota","retraction":null,"screen_n_in":null,"score":{"opus":0.005461311229028802,"gpt":0.1726352784125723,"spread":0.1671739671835435,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00005379385,0.00008898086,0.0001584297,0.000004388186,0.0002502548,0.0002582028,0.0001263508,0.0001205961,0.01496598],"category_scores_gemma":[0.0001507375,0.0000539805,0.00004426682,0.0001150724,0.00001518383,0.00009481925,0.0000585808,0.0001351066,0.0001986616],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002377505,"about_ca_system_score_gemma":0.000007485062,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1424609,"about_ca_topic_score_gemma":0.6651977,"domain_scores_codex":[0.9992162,0.00002909525,0.0001461066,0.0002758264,0.000103855,0.000228945],"domain_scores_gemma":[0.9989328,0.0008496578,0.00005212844,0.00004086817,0.00003167721,0.00009288555],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.00003855741,0.0001481818,0.2550611,0.00000400862,0.00003659879,0.0001866411,0.00004460614,0.00001363875,0.06537278,0.00002407876,0.6535577,0.02551211],"study_design_scores_gemma":[0.0002390244,0.0005089169,0.5302624,0.00005976815,0.00003409909,0.00009713792,0.0001565789,0.00001609948,0.0005143943,0.008101493,0.459634,0.000376082],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917463,0.001067475,0.000003138234,0.0002054822,0.0004761305,0.0001455748,0.002222975,0.00007919259,0.004053731],"genre_scores_gemma":[0.9952452,0.0009809907,0.0001614161,0.0008192646,0.0002664632,0.00001451312,0.000546806,0.000001080293,0.001964332],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5227368,"threshold_uncertainty_score":0.9859345,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2148932187","doi":"10.3852/09-264","title":"Shifting fungal endophyte communities colonize<i>Bouteloua gracilis</i>: effect of host tissue and geographical distribution","year":2010,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Biology; Endophyte; Bouteloua gracilis; Host (biology); Botany; Ecology","retraction":null,"screen_n_in":null,"score":{"opus":0.00420984649274792,"gpt":0.2227852774287647,"spread":0.2185754309360168,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002786117,0.0001512556,0.0002036741,0.00002766199,0.0001571593,0.000023775,0.0001469819,0.0002112499,0.00001989157],"category_scores_gemma":[0.0002041509,0.0001278681,0.00006640275,0.00007822136,0.000269061,0.000004365927,0.0001586142,0.0001969823,0.000002590155],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002712161,"about_ca_system_score_gemma":0.00001833417,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005500342,"about_ca_topic_score_gemma":0.0001360906,"domain_scores_codex":[0.9992194,0.0001338082,0.0001641133,0.0001750166,0.0000887115,0.0002189487],"domain_scores_gemma":[0.9994261,0.000128892,0.00007638584,0.0002302824,0.0000567488,0.00008162794],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001987906,0.00003802317,0.1750179,0.0000425839,0.0000262945,0.000009092341,0.00001254655,8.480589e-7,0.8231995,0.0001420406,0.0002505394,0.001061786],"study_design_scores_gemma":[0.000693106,0.001420411,0.6244245,0.00001726953,0.0000768796,0.0000776043,0.00004437584,0.00002559658,0.3595903,0.00001621916,0.01338456,0.0002292183],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967921,0.0005573797,0.00007938151,0.00002113321,0.0001737535,0.0002097707,0.001953543,0.00001888699,0.0001940401],"genre_scores_gemma":[0.9985751,0.0001510296,0.0001311401,0.00004812953,0.00009495813,0.00002969571,0.0009343663,0.000008849776,0.00002673227],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4636092,"threshold_uncertainty_score":0.5214309,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2314475256","doi":"10.3852/14-157","title":"Detection of phytohormones in temperate forest fungi predicts consistent abscisic acid production and a common pathway for cytokinin biosynthesis","year":2015,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":83,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; Trent University","funders":"","keywords":"Abscisic acid; Biology; Cytokinin; Temperate climate; Botany; Biosynthesis; Auxin; Biochemistry; Enzyme; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02831501876556236,"gpt":0.2189010627465648,"spread":0.1905860439810025,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003436374,0.0001026146,0.000189202,0.00003365317,0.00007736832,0.00002206696,0.00006904828,0.0001003821,0.00002151428],"category_scores_gemma":[0.0005019508,0.00004460391,0.00004283619,0.0002070346,0.00001731557,0.0001088213,0.00002709352,0.0000732362,0.00001046785],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002852709,"about_ca_system_score_gemma":0.00001028066,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004224788,"about_ca_topic_score_gemma":0.003361956,"domain_scores_codex":[0.9992373,0.00006890341,0.0002287375,0.0002147646,0.00008953091,0.0001607818],"domain_scores_gemma":[0.9991701,0.0005331343,0.000105134,0.00004364931,0.00008843122,0.00005953744],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003101339,0.00008307482,0.1410934,0.00001265332,0.000009527541,0.000001380932,0.00007253301,0.00001529091,0.843848,0.00006733763,0.000489876,0.01399677],"study_design_scores_gemma":[0.000204913,0.001825614,0.4120377,0.0001216589,0.00003600309,0.00006129556,0.001023343,0.0007891864,0.5760267,0.001303041,0.006309312,0.000261245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979081,0.0004296842,0.000006188036,0.0002248313,0.000308285,0.0004769943,0.0004260484,0.0000363999,0.0001834298],"genre_scores_gemma":[0.9993004,0.0002326149,0.00007005404,0.00003209316,0.0001090258,0.0000946636,0.0001122884,9.799633e-7,0.00004786504],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2709443,"threshold_uncertainty_score":0.187605,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2164266966","doi":"10.3852/12-137","title":"<i>Phialemoniopsis</i> , a new genus of Sordariomycetes, and new species of <i>Phialemonium</i> and <i>Lecythophora</i>","year":2013,"lang":"ru","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Incertae sedis; Monophyly; Internal transcribed spacer; Botany; Phylogenetic tree; Genus; Taxonomy (biology); Type species; Taxon; Zoology; Clade; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01283996016568073,"gpt":0.2057435879781637,"spread":0.192903627812483,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001616835,0.0004451533,0.0007339873,0.0001055706,0.00009277603,0.00006766008,0.0002869133,0.0004791569,0.0002291177],"category_scores_gemma":[0.0001882228,0.0004200426,0.0001835596,0.0002190895,0.0004891697,0.0000195825,0.0004292283,0.0001683779,0.00001563047],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001288006,"about_ca_system_score_gemma":0.0005236576,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001066494,"about_ca_topic_score_gemma":0.00008193721,"domain_scores_codex":[0.9978269,0.0001096551,0.0006694454,0.0006605404,0.0002202058,0.0005132399],"domain_scores_gemma":[0.9983454,0.0000985468,0.0004219884,0.0004830196,0.0001595267,0.000491555],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002473226,0.0001316843,0.0395186,0.0002468666,0.0001689269,0.00001310345,0.00008414003,0.000003784578,0.8843244,0.0001625643,0.06698503,0.008113613],"study_design_scores_gemma":[0.004484561,0.003558577,0.3836773,0.0003210942,0.0008401937,0.0001760248,0.0004623931,0.00006611176,0.4493754,0.00101548,0.1545958,0.001427065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9434309,0.05110933,0.0001285369,0.0004164295,0.000277369,0.0006465889,0.001147441,0.00001440806,0.002829026],"genre_scores_gemma":[0.9744499,0.01768008,0.002230396,0.0005263119,0.0004152606,0.00001233852,0.0001578127,0.00003875764,0.004489146],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.434949,"threshold_uncertainty_score":0.9998251,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2002252243","doi":"10.2307/3761557","title":"Phylogenetic Analyses and the Distribution of Nematophagy Support a Monophyletic Pleurotaceae within the Polyphyletic Pleurotoid-Lentinoid Fungi","year":2000,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"University of Alberta","keywords":"Polyphyly; Biology; Monophyly; Clade; Botany; Zoology; Phylogenetic tree","retraction":null,"screen_n_in":null,"score":{"opus":0.01591550915915818,"gpt":0.2362953789507177,"spread":0.2203798697915595,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003414035,0.0001666292,0.0002481271,0.00001005995,0.000335981,0.00006773807,0.0003228576,0.00007594752,0.005171129],"category_scores_gemma":[0.0001215398,0.00004707109,0.0001327839,0.0003623739,0.0001136818,0.00004480442,0.00004689394,0.0001832943,0.0001998157],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000805447,"about_ca_system_score_gemma":0.000009669369,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006553672,"about_ca_topic_score_gemma":0.00007326524,"domain_scores_codex":[0.9986773,0.0003003456,0.0003531901,0.0002455173,0.0001831408,0.0002404796],"domain_scores_gemma":[0.9977834,0.001831574,0.0001537494,0.0001259061,0.00004740511,0.00005794083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0019577,0.0004698501,0.06459576,0.00006745324,0.0002686917,0.00005183923,0.0008565035,0.0006439035,0.8669074,0.01349214,0.01667029,0.03401847],"study_design_scores_gemma":[0.0009612903,0.001702087,0.9027819,0.00008475459,0.0005545773,0.0005109252,0.0009368466,0.004543844,0.03200829,0.005398447,0.04975358,0.0007634575],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959109,0.001160407,0.000006106141,0.0006979747,0.0001166165,0.0005129745,0.0005156868,0.00003190502,0.001047471],"genre_scores_gemma":[0.9976726,0.0009270872,0.00001011906,0.000386774,0.00009493226,0.00006346355,0.0002773276,0.000001286009,0.0005664135],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8381861,"threshold_uncertainty_score":0.9957383,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1981741911","doi":"10.3852/08-071","title":"<i>Pleospora</i>species with<i>Stemphylium</i>anamorphs: a four locus phylogeny resolves new lineages yet does not distinguish among species in the<i>Pleospora herbarum</i>clade","year":2009,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Dothideomycetes; Clade; Species complex; Intergenic region; Phylogenetic tree; Phylogenetics; Botany; Genetics; Zoology; Gene; Genome","retraction":null,"screen_n_in":null,"score":{"opus":0.0142639060840202,"gpt":0.212082338871083,"spread":0.1978184327870628,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003308409,0.0005212061,0.0005043228,0.0001031325,0.0002364275,0.0001853063,0.0008054095,0.0003032745,0.00006822134],"category_scores_gemma":[0.0004801471,0.0003232961,0.0002136204,0.0003804923,0.0002991287,0.0000197714,0.0001261529,0.0003152059,0.00001444105],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003061841,"about_ca_system_score_gemma":0.0001856064,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001631904,"about_ca_topic_score_gemma":0.00168716,"domain_scores_codex":[0.9973338,0.0001892782,0.0005168455,0.0008132439,0.0004011911,0.0007456616],"domain_scores_gemma":[0.9984739,0.0001210827,0.0002709438,0.0007788502,0.0001121154,0.0002430912],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006856544,0.0003193018,0.1582236,0.00004056489,0.00007721338,0.0007878412,0.000247658,0.0001046569,0.8063946,0.0003312053,0.03229239,0.0004952959],"study_design_scores_gemma":[0.001009733,0.0009476797,0.9230993,0.00008740457,0.00008672992,0.00006117916,0.0007997162,0.00001347824,0.03696543,0.0002030491,0.03604886,0.0006774355],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904811,0.001731399,0.0001168931,0.000813334,0.0002229408,0.0006075423,0.001045864,0.00007479887,0.004906177],"genre_scores_gemma":[0.9908643,0.0005442373,0.0006759551,0.002619308,0.0008350609,0.00003579737,0.0004965104,0.00003493281,0.00389392],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7694292,"threshold_uncertainty_score":0.9999219,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2316271205","doi":"10.1080/00275514.2001.12063226","title":"Phylogenetics of Helotiales and Rhytismatales based on partial small subunit nuclear ribosomal DNA sequences","year":2001,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Forest Service; University of Toronto; Natural Resources Canada","funders":"","keywords":"Biology; Ribosomal DNA; Ribosomal RNA; Phylogenetics; Protein subunit; Molecular phylogenetics; Nuclear DNA; Evolutionary biology; DNA; Genetics; Computational biology; Mitochondrial DNA; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01649738071613863,"gpt":0.2202563229423101,"spread":0.2037589422261715,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007378994,0.0001345084,0.0001448834,0.0000368645,0.00006724217,0.00001499651,0.0001265458,0.0001296623,0.00003989311],"category_scores_gemma":[0.00007069568,0.0001182614,0.00005608884,0.00005712029,0.0001776545,0.000001722632,0.00005863513,0.0000440387,0.00000707374],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004283437,"about_ca_system_score_gemma":0.00004076535,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001173722,"about_ca_topic_score_gemma":0.00003629498,"domain_scores_codex":[0.9992619,0.00006210101,0.0001483254,0.0002504101,0.00008135477,0.0001959652],"domain_scores_gemma":[0.9996039,0.00003003008,0.00006944259,0.0001820198,0.0000360158,0.00007862053],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002580606,0.0001087534,0.06115447,0.00002224956,0.0000201555,0.00004192325,0.000007112923,0.0001753886,0.936958,0.0001562335,0.000181596,0.0009160872],"study_design_scores_gemma":[0.00128883,0.003024461,0.6358188,0.00006478134,0.0001072935,0.00009037653,0.0001213167,0.001912645,0.3394444,0.00009927039,0.01742463,0.0006031506],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980773,0.0004667854,0.000102349,0.00003771284,0.00006568539,0.0001093169,0.0004917565,0.00001408634,0.0006349574],"genre_scores_gemma":[0.9984914,0.000365734,0.000571947,0.0002604142,0.00009674938,0.000006830418,0.0001539484,0.00001266721,0.00004029452],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5975136,"threshold_uncertainty_score":0.4822562,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2011919193","doi":"10.3852/12-119","title":"<i>Phytophthora niederhauserii</i> sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries","year":2014,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"North Carolina Department of Agriculture and Consumer Services","keywords":"Biology; Botany; Ornamental plant; Phytophthora","retraction":null,"screen_n_in":null,"score":{"opus":0.01188683862155386,"gpt":0.1905631237474907,"spread":0.1786762851259369,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023629,0.0001788616,0.0002892721,0.00001898444,0.0001896572,0.00008203441,0.0001528404,0.0001217913,0.0001035224],"category_scores_gemma":[0.00006577545,0.00006437772,0.00003140541,0.0002058693,0.0001594199,0.00008817881,0.00005265531,0.0001196402,0.000009004255],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004624783,"about_ca_system_score_gemma":0.000008293757,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001450441,"about_ca_topic_score_gemma":0.01532187,"domain_scores_codex":[0.9989054,0.00009953864,0.0001709269,0.0003024087,0.0001888771,0.0003328719],"domain_scores_gemma":[0.9993595,0.0003874492,0.0001176368,0.00003977244,0.00003105338,0.00006453508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003647678,0.0002438395,0.53131,0.00001110486,0.00006383036,0.0001922786,0.0001470044,0.00001129905,0.4627386,0.0004285189,0.00165808,0.002830734],"study_design_scores_gemma":[0.0003197637,0.0003786711,0.9909124,0.00006542856,0.000008854471,0.00001932931,0.0004154958,0.00002383467,0.002202856,0.000091526,0.00535614,0.0002056989],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957953,0.0003201854,0.000001129868,0.0003145158,0.00006201953,0.0001895756,0.0003636843,0.00005334556,0.002900234],"genre_scores_gemma":[0.9984327,0.0002001424,0.00002769292,0.0003896022,0.00006316345,0.00001744428,0.00007238662,0.000001296298,0.0007955842],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4605357,"threshold_uncertainty_score":0.8549962,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4229038753","doi":"10.1080/00275514.2022.2045116","title":"Whole genome sequencing and phylogenomic analysis show support for the splitting of genus <i>Pythium</i>","year":2022,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"National Brain Research Centre; Agriculture and Agri-Food Canada; Ministry of Agriculture, Forestry and Fisheries; Government of Jiangsu Province","keywords":"Biology; Genus; Genome; Pythium; Evolutionary biology; Whole genome sequencing; DNA sequencing; Phylogenomics; Phylogenetics; Computational biology; Botany; Genetics; Clade; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01999988669648507,"gpt":0.2049109306349776,"spread":0.1849110439384925,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006094025,0.00008078881,0.0001900629,0.00001551643,0.0005367959,0.00002043143,0.0002315348,0.00003394222,0.0001931021],"category_scores_gemma":[0.00002533833,0.00002818835,0.0001556013,0.0003836599,0.00005481119,0.00001920048,0.0001393714,0.0000834329,0.000001106653],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003734319,"about_ca_system_score_gemma":0.00001245772,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005771956,"about_ca_topic_score_gemma":0.0001518309,"domain_scores_codex":[0.9992343,0.0000554066,0.0001769007,0.000217357,0.0001084455,0.0002075553],"domain_scores_gemma":[0.9993946,0.0003609552,0.0001303036,0.00005684041,0.00002705201,0.00003028255],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002229109,0.00001201024,0.006625423,0.000005493247,0.00009583701,0.000005367,0.00004913273,0.0005347901,0.9898474,0.00005969156,0.00009843872,0.002644094],"study_design_scores_gemma":[0.0001978086,0.0005750352,0.8863545,0.000002254084,0.0005618439,0.00003475644,0.0027207,0.002492727,0.002456883,0.0001668872,0.104147,0.0002896147],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971543,0.0008480076,0.00002297732,0.0002874596,0.00005266308,0.000223727,0.001191534,0.00001543367,0.0002039064],"genre_scores_gemma":[0.9988295,0.0000436228,0.0001541748,0.0002663885,0.00006043251,0.00005459803,0.0001221813,6.800411e-7,0.0004684124],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9873906,"threshold_uncertainty_score":0.4128654,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2112993072","doi":"10.3852/mycologia.98.1.94","title":"Molecular systematics of Helicoma, Helicomyces and Helicosporium and their teleomorphs inferred from rDNA sequences","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Croucher Foundation; New York Botanical Garden","keywords":"Biology; Monophyly; Clade; Sensu; Maximum parsimony; Systematics; Phylogenetic tree; Genus; Botany; Ribosomal DNA; Phylogenetics; Zoology; Molecular phylogenetics; Evolutionary biology; Taxonomy (biology); Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.006382852797823179,"gpt":0.199781710679196,"spread":0.1933988578813728,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001005704,0.0001806279,0.0002754585,0.00003702632,0.00005112989,0.00002857884,0.0001168375,0.0001492563,0.000007042563],"category_scores_gemma":[0.00005262696,0.0001379111,0.00005245814,0.00005924988,0.0001382958,0.000004620042,0.0001095636,0.00004628463,0.000001526593],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004684271,"about_ca_system_score_gemma":0.0000327282,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001793888,"about_ca_topic_score_gemma":0.0000431896,"domain_scores_codex":[0.9991307,0.00006797547,0.000260196,0.000282131,0.00008243354,0.0001765654],"domain_scores_gemma":[0.9994881,0.00004696679,0.0001331432,0.0002080912,0.00005952314,0.00006413441],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003238551,0.00005171897,0.04265663,0.00009445962,0.00004680533,0.00001630933,0.00001744902,0.00001809623,0.9564751,0.0001729588,0.0002385645,0.0001794619],"study_design_scores_gemma":[0.000691852,0.0004899352,0.233467,0.0001283732,0.00009370213,0.00007318102,0.000386727,0.0003486463,0.7612889,0.001056665,0.001529291,0.0004457239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9884471,0.009450907,0.0003834539,0.00003223709,0.00005676351,0.0001959101,0.001116859,0.00001535958,0.000301353],"genre_scores_gemma":[0.9986047,0.0003410042,0.0004481709,0.0001518274,0.00006792125,0.00001841489,0.000327326,0.00001124377,0.00002944044],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1951863,"threshold_uncertainty_score":0.562385,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4241783054","doi":"10.2307/3761599","title":"Pathogenic Properties of Fungal Melanins","year":2001,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"","keywords":"Melanin; Biology; Hypha; Cell wall; Virulence; Spore; Microbiology; Botany; Cell biology; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.01700416075006201,"gpt":0.2149226584092698,"spread":0.1979184976592078,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007342837,0.00009312143,0.0001121325,0.00002475763,0.00003813479,0.000006058899,0.0001302179,0.00009586747,0.00005024041],"category_scores_gemma":[0.00007079428,0.00007286666,0.00007834646,0.00006306673,0.00005477222,0.000001773078,0.00006835406,0.00003693213,0.00001956799],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000435756,"about_ca_system_score_gemma":0.00004433197,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006247762,"about_ca_topic_score_gemma":0.00001340005,"domain_scores_codex":[0.9994103,0.00003639566,0.0001319594,0.0001770583,0.0000741816,0.0001700877],"domain_scores_gemma":[0.9996637,0.000004046839,0.00004835856,0.0001845832,0.00004880931,0.00005047479],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001318292,0.0000749459,0.05037537,0.00001113164,0.00002615525,0.00002394332,0.000008140613,0.00001031759,0.9477682,0.00005284635,0.0009976762,0.0005194747],"study_design_scores_gemma":[0.0006184024,0.0008534936,0.3865603,0.00002845219,0.00006683567,0.0001887216,0.0001167838,0.00005713705,0.5804762,0.00003701904,0.03063865,0.0003579568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949701,0.002116519,0.00006137817,0.00001758753,0.00007815144,0.00009973772,0.0001611404,0.00001363385,0.002481745],"genre_scores_gemma":[0.9985446,0.0003944613,0.000122013,0.0001298162,0.00009186345,0.00001506404,0.00005977769,0.00000877089,0.0006336012],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3672919,"threshold_uncertainty_score":0.2971416,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2153061334","doi":"10.3852/12-056","title":"How well do ITS rDNA sequences differentiate species of true morels ( <i>Morchella</i> )?","year":2012,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"","keywords":"Biology; GenBank; Clade; Phylogenetic tree; Locus (genetics); Botany; Evolutionary biology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.02460474220151359,"gpt":0.2083389106698664,"spread":0.1837341684683528,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001675784,0.0001592917,0.000233369,0.00001844176,0.0001293419,0.00007182046,0.000269607,0.0001255266,0.01080929],"category_scores_gemma":[0.0001412367,0.00005738313,0.0001247283,0.0002344952,0.00002272453,0.0002358549,0.00007161049,0.000153329,0.0005825266],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001621924,"about_ca_system_score_gemma":0.000004526934,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009609724,"about_ca_topic_score_gemma":0.00002932166,"domain_scores_codex":[0.9989694,0.00009877575,0.0001885732,0.0001849981,0.0001775883,0.0003806392],"domain_scores_gemma":[0.9986266,0.0009970348,0.0001381358,0.00006244401,0.00006002537,0.0001157852],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003378587,0.0001303669,0.1923874,0.00001475326,0.00002505603,0.000003141596,0.00008201384,0.000001990552,0.7862681,0.004422813,0.0151229,0.001507768],"study_design_scores_gemma":[0.0001032635,0.0005262167,0.3923183,0.00008046602,0.00007692825,0.00005743813,0.001445812,0.00003946022,0.2938564,0.000999125,0.309933,0.0005636227],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9769039,0.001132197,0.000004555858,0.000569578,0.0006918238,0.0001681153,0.0005909425,0.00005592105,0.01988304],"genre_scores_gemma":[0.9922853,0.000989613,0.00005298839,0.0001249498,0.0004207213,0.00001317583,0.000235757,9.480665e-7,0.005876581],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4924117,"threshold_uncertainty_score":0.990095,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2315288848","doi":"10.1080/00275514.2000.12061228","title":"Some fungi express β-1,3-glucanases similar to thaumatin-like proteins","year":2000,"lang":"en","type":"article","venue":"Mycologia","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":61,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"National Science Council","keywords":"Rhizoctonia solani; Thaumatin; Lentinus; Rhizoctonia; Biology; Biochemistry; Glucanase; Mycelium; Microbiology; Schizophyllum commune; Enzyme; Mushroom; Food science; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.01652117026467152,"gpt":0.2149857269516208,"spread":0.1984645566869493,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001809637,0.0002159326,0.0002366306,0.0000175607,0.00025828,0.00008840279,0.0005239724,0.0001502474,0.00714491],"category_scores_gemma":[0.00006034887,0.00008470535,0.0001123226,0.0003913624,0.00004927281,0.0001727152,0.00009897857,0.0001375916,0.001443617],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005241758,"about_ca_system_score_gemma":0.00001107871,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000434945,"about_ca_topic_score_gemma":0.0002126925,"domain_scores_codex":[0.9984162,0.000104221,0.0002366549,0.0004449783,0.0002680944,0.0005298133],"domain_scores_gemma":[0.9994068,0.0001648754,0.00005190352,0.0001315007,0.00004517574,0.0001997052],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005806713,0.0001736945,0.003710102,0.000006849408,0.00002320327,0.0000245676,0.0001225653,0.000007986891,0.9230202,0.0001181579,0.02555117,0.04718342],"study_design_scores_gemma":[0.0004552017,0.001962477,0.5061174,0.00008413071,0.00005317096,0.0000284557,0.0003648224,0.00003058645,0.2533345,0.001477989,0.2348167,0.001274564],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952227,0.0002906526,3.150443e-7,0.001610334,0.0001341218,0.0006194292,0.00008496724,0.0002821964,0.001755286],"genre_scores_gemma":[0.9924042,0.00002030918,0.0006984927,0.003555281,0.0004391156,0.0001879584,0.00003579233,0.0000023542,0.002656493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6696857,"threshold_uncertainty_score":0.9993339,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2017721268","doi":"10.3852/13-032","title":"Morphological and phylogenetic identification of <i>Botrytis sinoviticola</i> , a novel cryptic species causing gray mold disease of table grapes ( <i>Vitis vinifera</i> ) in China","year":2014,"lang":"en","type":"article","venue":"Mycologia","topic":"Fungal Plant Pathogen Control","field":"Agricultural and Biological Sciences","cited_by":59,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Botrytis cinerea; Botrytis; Mycelium; Botany; Potato dextrose agar; Phylogenetic tree; Species complex; Horticulture; Gene; Agar; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.008897824750627377,"gpt":0.1837971068969946,"spread":0.1748992821463672,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004596815,0.0001779572,0.0003877695,0.00003987713,0.00008439576,0.00004144274,0.0001853518,0.000120024,0.00008470824],"category_scores_gemma":[0.0003761782,0.00008469282,0.00006868113,0.000406669,0.0002151564,0.00009179636,0.00008856924,0.0001152672,0.000003250228],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001900351,"about_ca_system_score_gemma":0.00001147643,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001529327,"about_ca_topic_score_gemma":0.000176335,"domain_scores_codex":[0.9984661,0.0001373417,0.0004949831,0.0003784319,0.0002135926,0.0003095761],"domain_scores_gemma":[0.9990452,0.0004418009,0.0002485658,0.0000995579,0.00006420948,0.0001006589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007633612,0.0002080245,0.09654817,0.00003454906,0.000007003178,0.0000167337,0.00001880855,0.0001357886,0.901661,0.0003459671,0.00003636195,0.0009112264],"study_design_scores_gemma":[0.0003353229,0.0003378384,0.9598295,0.00003877333,0.00003585086,0.00001987425,0.00002926349,0.001185144,0.03749406,0.000428104,0.00009866523,0.0001675688],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984053,0.0003622375,0.00009615725,0.0002044293,0.00008017909,0.0003482988,0.0003427584,0.00002540915,0.000135226],"genre_scores_gemma":[0.9994043,0.00005454416,0.0002067208,0.0001414817,0.00006012223,0.00002664019,0.00005167607,0.000001661381,0.00005289784],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.864167,"threshold_uncertainty_score":0.3453673,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4240874746","doi":"10.2307/3762088","title":"Toward a Better Understanding of the Infrageneric Relationships in Cortinarius (Agaricales, Basidiomycota)","year":2004,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":59,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Royal Ontario Museum","funders":"National Science Foundation","keywords":"Biology; Clade; Subgenus; Taxon; Phylogenetic tree; Genus; Phylogenetics; Agaricales; Molecular phylogenetics; Botany; Zoology; Evolutionary biology; Taxonomy (biology)","retraction":null,"screen_n_in":null,"score":{"opus":0.06793525746295016,"gpt":0.2193458565480014,"spread":0.1514105990850512,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001889439,0.00008438864,0.0001236764,0.00002028316,0.0001530606,0.00001819925,0.0001998605,0.0001060268,0.0007886204],"category_scores_gemma":[0.0003032809,0.00002917465,0.00007504433,0.0006040655,0.00001821749,0.00006610754,0.00006276333,0.0002647598,0.00006250219],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001212461,"about_ca_system_score_gemma":0.00001585213,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006403137,"about_ca_topic_score_gemma":0.0007896319,"domain_scores_codex":[0.9992133,0.0001068954,0.0002341822,0.0001467937,0.0001209498,0.0001779014],"domain_scores_gemma":[0.9989022,0.000888286,0.0001013032,0.00005532958,0.00001959037,0.00003331038],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00003741162,0.0001231172,0.9075896,0.000007777923,0.00001050448,0.00001719447,0.0002272555,0.0004471545,0.07020615,0.0176917,0.003049669,0.0005924992],"study_design_scores_gemma":[0.000113876,0.0001504576,0.9618361,0.00007757907,0.00001519329,0.00004956608,0.0006936142,0.0000630193,0.00155045,0.02969393,0.005592971,0.0001632476],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9925102,0.00008953891,0.0001124283,0.002440796,0.0002324664,0.0001776425,0.00009082756,0.00002532483,0.004320798],"genre_scores_gemma":[0.9993011,0.00005209426,0.0001506843,0.0003099072,0.00004991875,0.00001187534,0.00005319956,6.065106e-7,0.00007055523],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0686557,"threshold_uncertainty_score":0.863484,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2313132546","doi":"10.3852/12-035","title":"Phylogenetic classification of <i>Pleurothecium</i> and <i>Pleurotheciella</i> gen. nov. and its dactylaria-like anamorph (Sordariomycetes) based on nuclear ribosomal and protein-coding genes","year":2012,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Phylogenetic tree; Internal transcribed spacer; Clade; Monophyly; Ribosomal DNA; Phylogenetics; Botany; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.01650354863459138,"gpt":0.2206983975150284,"spread":0.204194848880437,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002029948,0.0002210044,0.000210075,0.00006941664,0.000130471,0.00003177319,0.0001091397,0.0001787177,0.00001760522],"category_scores_gemma":[0.00008497517,0.0001993075,0.00004465368,0.00008412026,0.0001231008,0.000009987287,0.0001102333,0.0000847437,0.00000399094],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007186085,"about_ca_system_score_gemma":0.00003118116,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004565136,"about_ca_topic_score_gemma":0.000003538932,"domain_scores_codex":[0.9988418,0.0001140364,0.0002124272,0.00039803,0.0001227088,0.0003109901],"domain_scores_gemma":[0.9993795,0.00004163061,0.0001287679,0.0002340084,0.00004882816,0.0001673131],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002063367,0.0001091595,0.04117277,0.00007630329,0.00002170031,0.000003342578,0.000015139,0.000006316876,0.9569877,0.0002570959,0.00014655,0.0009975877],"study_design_scores_gemma":[0.001503918,0.001329034,0.6984454,0.00005848221,0.0001272479,0.00006567176,0.00006142557,0.003568254,0.2811684,0.00001853876,0.01305409,0.0005995571],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955865,0.002786698,0.0000807144,0.00004747982,0.0000631131,0.0004670895,0.0003603816,0.00001628932,0.0005916918],"genre_scores_gemma":[0.9982699,0.0004228714,0.0006296526,0.000391017,0.0001034987,0.00002982394,0.00005849385,0.00002995332,0.00006480524],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6758193,"threshold_uncertainty_score":0.8127524,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2308754061","doi":"10.3852/15-136","title":"Sexual and asexual states of some endophytic <i>Phialocephala</i> species of <i>Picea</i>","year":2016,"lang":"yi","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Clade; Ascocarp; Botany; Internal transcribed spacer; Plant use of endophytic fungi in defense; DNA sequencing; Ribosomal RNA; Ribosomal DNA; Ecology; Taxonomy (biology); Gene; Phylogenetics; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.009905792889703016,"gpt":0.2120354684234176,"spread":0.2021296755337146,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001829819,0.000296467,0.0004869169,0.00007047399,0.00005407361,0.00001296307,0.0002330026,0.0002644033,0.00009783547],"category_scores_gemma":[0.000195277,0.0002130484,0.0001012924,0.00007387631,0.0006227056,0.00001293699,0.0002621817,0.00006852488,0.00001125183],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001305302,"about_ca_system_score_gemma":0.0001482628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001948229,"about_ca_topic_score_gemma":0.0000139374,"domain_scores_codex":[0.9983179,0.0001178609,0.0004852366,0.0004842049,0.0001916672,0.0004031519],"domain_scores_gemma":[0.9988561,0.0001740341,0.0003115449,0.0003705606,0.0001354219,0.0001523022],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004204215,0.0002775477,0.03681581,0.0002842779,0.0001782729,0.00002864079,0.00003986946,0.000003327618,0.9561376,0.0003963003,0.003232347,0.002185572],"study_design_scores_gemma":[0.002774719,0.004614454,0.1455803,0.0001460897,0.0003792805,0.00004689807,0.0004735033,0.00001493003,0.8319881,0.0003988794,0.01289443,0.0006884447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.980698,0.009142332,0.00006469969,0.0001151544,0.0002737617,0.0002224797,0.008966277,0.000009925076,0.0005073479],"genre_scores_gemma":[0.9931586,0.004542554,0.0001166428,0.0001819886,0.0002743857,0.000009725691,0.0001652005,0.00002216665,0.001528725],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1241495,"threshold_uncertainty_score":0.8687862,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2310281020","doi":"10.3852/14-275","title":"Cytology and molecular phylogenetics of Monoblepharidomycetes provide evidence for multiple independent origins of the hyphal habit in the Fungi","year":2015,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":53,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Hypha; Phylogenetics; Lineage (genetic); Evolutionary biology; Chytridiomycota; Botany; Ascomycota; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.05537428779367645,"gpt":0.2668395089873377,"spread":0.2114652211936613,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003756571,0.00008177436,0.0001494069,0.00001150472,0.00005082806,0.00001190302,0.0003223497,0.00008217464,0.00002955024],"category_scores_gemma":[0.0009745392,0.00002498725,0.00005834223,0.000171244,0.00003497411,0.00004021656,0.00007473178,0.00009924416,0.000002840451],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002047958,"about_ca_system_score_gemma":0.00002247599,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009615917,"about_ca_topic_score_gemma":0.0007070215,"domain_scores_codex":[0.9992276,0.0001458561,0.0002063072,0.000146872,0.0001232429,0.0001501211],"domain_scores_gemma":[0.9964083,0.00328879,0.000120543,0.00007164751,0.00008158666,0.00002907406],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001365479,0.00006407634,0.4824735,0.00001269643,0.000008682151,0.000001889019,0.0001329382,0.00009933152,0.5138786,0.001408627,0.0005369619,0.00124613],"study_design_scores_gemma":[0.0006092591,0.002865442,0.748549,0.0001730434,0.0001196087,0.0001188044,0.001948176,0.002974215,0.2060911,0.0074243,0.02877543,0.0003515217],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971032,0.001272112,0.00002473875,0.0005787018,0.0001363975,0.0005640951,0.000226354,0.000005257724,0.00008918267],"genre_scores_gemma":[0.9993681,0.0001306005,0.0002066353,0.0001750936,0.00003242255,0.00005742889,0.00001834254,5.674601e-7,0.00001084733],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3077875,"threshold_uncertainty_score":0.1453645,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1983899549","doi":"10.3852/mycologia.98.2.307","title":"Two new species of Pseudogymnoascus with Geomyces anamorphs and their phylogenetic relationship with Gymnostellatospora","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Zoology; Botany; Ascospore; Monophyly; Genus; Phylogenetic tree; Clade; Spore","retraction":null,"screen_n_in":null,"score":{"opus":0.01138427732584892,"gpt":0.1798493647168817,"spread":0.1684650873910328,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007282456,0.0001474181,0.0001880064,0.0000212079,0.0001354102,0.00003653967,0.0001099445,0.0000629261,0.001482297],"category_scores_gemma":[0.00002300301,0.000045242,0.00003166346,0.0002999114,0.00003937293,0.00006914851,0.00002464213,0.0001060728,0.00003513436],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008352005,"about_ca_system_score_gemma":0.00001528052,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002781343,"about_ca_topic_score_gemma":0.002394018,"domain_scores_codex":[0.9992928,0.00004215593,0.0001636412,0.0002160042,0.00009781661,0.0001875875],"domain_scores_gemma":[0.9986146,0.001101439,0.0001147422,0.00005865722,0.00005044171,0.00006012697],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001221569,0.00003979775,0.9387142,0.000004935995,0.00001491014,0.000007713484,0.00003627536,0.0001369088,0.05423896,0.002928284,0.002487066,0.001268754],"study_design_scores_gemma":[0.0001411181,0.0007476869,0.9793456,0.00004014824,0.0000275333,0.0001096254,0.0003867882,0.00003376587,0.00789978,0.001506348,0.009570402,0.0001911768],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9860712,0.0005811403,0.00002516736,0.0002698747,0.00003768135,0.0001824103,0.0001660255,0.00003915411,0.01262737],"genre_scores_gemma":[0.9972678,0.00008063068,0.0004709093,0.00004582494,0.0001416443,0.000004793759,0.0002075135,0.000001198953,0.001779636],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04633918,"threshold_uncertainty_score":0.9994305,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2144285058","doi":"10.3852/09-030","title":"<i>Cladonia pyxidata</i>and<i>C. pocillum</i>; genetic evidence to regard them as conspecific","year":2010,"lang":"en","type":"article","venue":"Mycologia","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"Parks Canada","keywords":"Biology; Internal transcribed spacer; Botany; Cladonia; Lichen; Phylogenetic tree; Monophyly; Thallus; Ribosomal DNA; Phylogenetics; Restriction fragment length polymorphism; Algae; Ecology; Clade; Gene; Polymerase chain reaction; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02611622684048241,"gpt":0.2276460169878195,"spread":0.2015297901473371,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003368041,0.0001783798,0.000238242,0.00001230507,0.0002330345,0.00009743334,0.0004584712,0.0002290663,0.003240597],"category_scores_gemma":[0.0006003864,0.00007019773,0.00005652765,0.0002768108,0.0001751932,0.00009740827,0.0002669854,0.0003290024,0.002031856],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000168527,"about_ca_system_score_gemma":0.00002130846,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002446836,"about_ca_topic_score_gemma":0.001440024,"domain_scores_codex":[0.9986025,0.00008334962,0.0002473517,0.0004893111,0.0001529917,0.0004244828],"domain_scores_gemma":[0.9988156,0.0006427809,0.00007435754,0.0001395231,0.00008172128,0.0002460035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005651382,0.0000485356,0.09460945,0.00000456227,0.000009093087,0.00003429779,0.00008279109,3.685767e-7,0.8677054,0.001424732,0.01034617,0.02567807],"study_design_scores_gemma":[0.0001007153,0.0005471205,0.8438506,0.00001088335,0.00001255811,0.0001043677,0.0001008361,0.00000589806,0.004910859,0.001077816,0.1490164,0.000261915],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.988798,0.0001299777,0.000001812041,0.005163919,0.0005273382,0.0003261837,0.00002263598,0.0001288374,0.004901291],"genre_scores_gemma":[0.9925765,0.0001183356,0.0009117642,0.004863918,0.0003245741,0.00004777186,0.000007436,0.000001635753,0.001147997],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8627946,"threshold_uncertainty_score":0.9987452,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2107562418","doi":"10.3852/mycologia.98.4.593","title":"An optimized method for mycelial compatibility testing in Sclerotinia sclerotiorum","year":2006,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; U.S. Department of Agriculture","keywords":"Sclerotinia sclerotiorum; Mycelium; Biology; Compatibility (geochemistry); Genotyping; Population; Hypha; Germplasm; Biotechnology; Horticulture; Botany; Food science; Genetics; Genotype","retraction":null,"screen_n_in":null,"score":{"opus":0.03720371324003924,"gpt":0.2616898386584972,"spread":0.224486125418458,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009583463,0.0001457328,0.000269112,0.00001620784,0.0002119608,0.00005553017,0.0002353392,0.0001412195,0.0001177014],"category_scores_gemma":[0.0001051153,0.00005826116,0.00006936246,0.0003158204,0.00003007301,0.00007780118,0.00003249084,0.00009884329,0.000007704383],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003660624,"about_ca_system_score_gemma":0.000009905917,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006062815,"about_ca_topic_score_gemma":0.003388389,"domain_scores_codex":[0.9986208,0.0001490608,0.0003079507,0.0004054519,0.0001172681,0.0003994443],"domain_scores_gemma":[0.9991927,0.0005022796,0.0001061663,0.00006686559,0.00007500661,0.00005699364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001007489,0.0001989797,0.01614657,0.000005474476,0.00000167616,0.000004476854,0.000005379046,0.0008188299,0.9728721,0.0003278096,0.000212377,0.009305554],"study_design_scores_gemma":[0.0006890387,0.0005690135,0.958887,0.00002366285,0.000009000245,0.000004595111,0.0000897799,0.02139907,0.01475716,0.002723323,0.0005834826,0.0002648148],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958991,0.00001988541,0.002319357,0.0001579214,0.0001406709,0.0006494492,0.0001898585,0.0001135655,0.0005101938],"genre_scores_gemma":[0.8780286,0.000001101667,0.1213913,0.0001180914,0.0001967029,0.00007924148,0.0001264514,0.000001132181,0.0000573905],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.958115,"threshold_uncertainty_score":0.2375821,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2147965705","doi":"10.3852/mycologia.99.1.7","title":"Patterns in the occurrence of saprophytic fungi carried by arthropods caught in traps baited with rotted wood and dung","year":2007,"lang":"en","type":"article","venue":"Mycologia","topic":"Forest Ecology and Biodiversity Studies","field":"Agricultural and Biological Sciences","cited_by":49,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Basidiocarp; Woodland; Longhorn beetle; Taxon; Botany; Hyphomycetes; Ecology; Taxonomy (biology)","retraction":null,"screen_n_in":null,"score":{"opus":0.0101651217411847,"gpt":0.1990177742713286,"spread":0.1888526525301439,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004080602,0.00009648699,0.0001626827,0.0000202186,0.0001028465,0.000008534608,0.000147114,0.00009808809,0.00005762819],"category_scores_gemma":[0.00003556458,0.00003077213,0.00001860205,0.0004063101,0.0001826665,0.00004210272,0.00004350425,0.0001531031,0.000002085671],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001438277,"about_ca_system_score_gemma":0.000004077081,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003773092,"about_ca_topic_score_gemma":0.02638829,"domain_scores_codex":[0.9992583,0.00009045564,0.0001438934,0.0001804055,0.00008903338,0.0002378692],"domain_scores_gemma":[0.9995284,0.0003336795,0.00005895069,0.00003291421,0.00002343993,0.00002259538],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001305539,0.0001063847,0.9903316,0.000007752637,0.000008384585,0.00003729562,0.0004417292,6.57776e-7,0.006162051,0.00001756194,0.0004488638,0.002307133],"study_design_scores_gemma":[0.0002706002,0.0004378495,0.9958405,0.00001289487,0.000007507902,0.000004192845,0.00229859,0.000003035878,0.0005578538,0.00002704294,0.0004558415,0.00008406116],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99861,0.0002291526,9.443247e-7,0.0007008058,0.0000313669,0.000237692,0.00009149004,0.00001023347,0.00008832781],"genre_scores_gemma":[0.9996229,0.00007037618,0.00001175903,0.0002284685,0.00001015766,0.000006757691,0.00003168167,1.924105e-7,0.00001772115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02601098,"threshold_uncertainty_score":0.9913776,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2143156308","doi":"10.3852/mycologia.99.3.356","title":"Plant community influences on soil microfungal assemblages in boreal mixed-wood forests","year":2007,"lang":"en","type":"article","venue":"Mycologia","topic":"Lichen and fungal ecology","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Mount Saint Vincent University; Concordia University","funders":"","keywords":"Microfungi; Understory; Biology; Botany; Ecology; Canopy","retraction":null,"screen_n_in":null,"score":{"opus":0.02408922355267432,"gpt":0.2483238929259103,"spread":0.2242346693732359,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001172745,0.0001686982,0.0002355325,0.00003554565,0.0002710617,0.00003707784,0.0004393679,0.0002778217,0.00009883898],"category_scores_gemma":[0.0001563847,0.00006612754,0.00006322009,0.0003199204,0.0001128127,0.00007913989,0.0001314788,0.0005506318,0.00008444282],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006463058,"about_ca_system_score_gemma":0.00001191786,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002353,"about_ca_topic_score_gemma":0.1272308,"domain_scores_codex":[0.9985863,0.0002787223,0.0002531109,0.0002192267,0.0001399095,0.0005227554],"domain_scores_gemma":[0.998345,0.001355067,0.00008971988,0.00007832449,0.00003205859,0.00009982668],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001791113,0.000429695,0.8490132,0.000006008756,0.00001150626,0.00006883197,0.0002040982,0.00000749524,0.1346849,0.0005351186,0.004188841,0.01067113],"study_design_scores_gemma":[0.0001916695,0.0008595869,0.9841076,0.000009761181,0.000004134995,0.000008846197,0.0007584308,0.000006491213,0.01150158,0.0003326549,0.002053156,0.0001661205],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918968,0.00004454628,6.819466e-7,0.0006260811,0.000248921,0.0001609627,0.00004235429,0.00007716665,0.006902492],"genre_scores_gemma":[0.9984075,0.000013069,0.00001875874,0.001209586,0.0001358639,0.00001377575,0.0000953896,9.846485e-7,0.0001050118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1350943,"threshold_uncertainty_score":0.8886949,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2124279734","doi":"10.3852/mycologia.99.2.240","title":"The systematic position of Phaeocryptopus gaeumannii","year":2007,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Oregon State University","keywords":"Biology; Internal transcribed spacer; Mycosphaerella; Botany; Clade; Genus; Type species; Phylogenetic tree; Ribosomal DNA; Evolutionary biology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.005941303055554267,"gpt":0.2321121850309439,"spread":0.2261708819753897,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003586886,0.00006266339,0.0000915111,0.00001545468,0.00008087327,0.000007903354,0.0001149299,0.0000630649,0.00000449142],"category_scores_gemma":[0.0001311181,0.00003963812,0.00006188498,0.00004474658,0.00004858875,0.000001028028,0.00003643032,0.00002656004,0.00000828577],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000594634,"about_ca_system_score_gemma":0.00001842687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000208272,"about_ca_topic_score_gemma":0.000008976982,"domain_scores_codex":[0.999463,0.00003853026,0.000179575,0.00009974142,0.00007593141,0.0001431968],"domain_scores_gemma":[0.9996109,0.00005156873,0.00008375581,0.0001781607,0.00004952847,0.00002608863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008193831,0.00003387405,0.002412684,0.0002889871,0.00003046294,0.00000946868,0.000006218144,0.000003401059,0.9951822,0.0008786914,0.0009258566,0.0001462167],"study_design_scores_gemma":[0.0008400506,0.001200292,0.3587027,0.0005031131,0.0001986058,0.0001811212,0.0004118537,0.00007932738,0.6323755,0.0006018462,0.004447814,0.0004578058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947612,0.001993451,0.001141181,0.00001610402,0.0001313431,0.000210747,0.00006050733,0.000008300167,0.001677139],"genre_scores_gemma":[0.9993829,0.00009299791,0.0001218728,0.00008045917,0.00005344683,0.00001027008,0.00004697091,0.000004605356,0.0002065256],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3628067,"threshold_uncertainty_score":0.1616396,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2161865036","doi":"10.1080/15572536.2004.11833055","title":"Comparative morphology and phylogenetic placement of two microsclerotial black fungi from<i>Sphagnum</i>","year":2003,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta; Canadian Forest Service; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Dothideomycetes; Botany; Conidium; Ribosomal DNA; Spore; Chlamydospore; Sphagnum; Morphology (biology); Phylogenetics; Zoology; Genetics; Ecology","retraction":null,"screen_n_in":null,"score":{"opus":0.01624691063597863,"gpt":0.2548874197761111,"spread":0.2386405091401324,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008215802,0.0001531377,0.0002355477,0.00002464308,0.00004201402,0.000008315699,0.00009866777,0.0001086335,0.000126732],"category_scores_gemma":[0.00003137994,0.0001404029,0.000053457,0.00004878357,0.000201294,0.0000015425,0.0000701218,0.00005363769,0.00001715358],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006547245,"about_ca_system_score_gemma":0.00004450378,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000158661,"about_ca_topic_score_gemma":0.00001825224,"domain_scores_codex":[0.9990854,0.0001259138,0.0001877211,0.0003233782,0.00006477257,0.0002128144],"domain_scores_gemma":[0.999563,0.0000355138,0.00008824276,0.0001898633,0.00004407085,0.00007929942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000126541,0.0001246023,0.03194426,0.000007731946,0.00006840001,0.000007675181,0.00003587769,0.0001415604,0.9653746,0.00009550533,0.002023284,0.00004990571],"study_design_scores_gemma":[0.001488038,0.000694939,0.1473726,0.000008479174,0.00007336058,0.00001533521,0.0001240571,0.0000376682,0.8464881,0.0001080687,0.003353076,0.0002363187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946301,0.002636587,0.0003476535,0.000005617547,0.0001057338,0.0002106897,0.0008514833,0.000006152777,0.001205989],"genre_scores_gemma":[0.9978197,0.0002683739,0.001294632,0.0002457883,0.0000488859,0.00001667519,0.0001993977,0.000008457057,0.00009808219],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1188866,"threshold_uncertainty_score":0.5725464,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2119554360","doi":"10.3852/06-157","title":"<i>Phytophthora × pelgrandis</i>, a new natural hybrid pathogenic to<i>Pelargonium grandiflorum</i>hort.","year":2009,"lang":"yi","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Phytophthora; Phytophthora nicotianae; Botany; Cultivar; Nicotiana tabacum; Pelargonium; Pathogenicity; Genetics; Gene; Microbiology","retraction":null,"screen_n_in":null,"score":{"opus":0.01027977094806927,"gpt":0.2149041891957222,"spread":0.2046244182476529,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005704115,0.0008059671,0.0009733255,0.00008777105,0.0008265554,0.0003903566,0.001152948,0.0004278558,0.0008716984],"category_scores_gemma":[0.0001871489,0.0003734591,0.0008197309,0.001034559,0.0001317407,0.000218996,0.0001964905,0.0007691205,0.001006812],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001280908,"about_ca_system_score_gemma":0.0001075511,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001238633,"about_ca_topic_score_gemma":0.0003998036,"domain_scores_codex":[0.995122,0.0002804111,0.0008016787,0.001381289,0.0006692393,0.001745395],"domain_scores_gemma":[0.9980507,0.0002609148,0.0002986398,0.0003406295,0.0001438967,0.0009051863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009326285,0.0003678308,0.001738845,0.00002181679,0.00007259873,0.0008879483,0.00006789517,0.0000206422,0.8501205,0.00039729,0.07104451,0.07432752],"study_design_scores_gemma":[0.001270678,0.003183684,0.8031712,0.000249609,0.0002650354,0.0005909391,0.0001817624,0.00008312394,0.008652596,0.002188178,0.1783,0.001863212],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.969718,0.01241384,0.00005056502,0.00977217,0.002706086,0.001195697,0.0008979086,0.0002713305,0.002974366],"genre_scores_gemma":[0.9772713,0.000937659,0.0006334072,0.005450008,0.001936784,0.00001883417,0.0002544366,0.000007214295,0.01349035],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8414679,"threshold_uncertainty_score":0.9998717,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2111006260","doi":"10.3852/11-403","title":"<i>Epichloë canadensis</i> , a new interspecific epichloid hybrid symbiotic with Canada wildrye ( <i>Elymus canadensis</i> )","year":2012,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant and fungal interactions","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Biology; Epichloë; Neotyphodium; Phylogenetic tree; Botany; Interspecific competition; Elymus; Phylogenetics; Endophyte; Gene; Genetics; Symbiosis; Poaceae","retraction":null,"screen_n_in":null,"score":{"opus":0.0126120679053167,"gpt":0.1768982606111346,"spread":0.164286192705818,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000128426,0.0003043701,0.0003289928,0.00002445489,0.0003285215,0.00008184386,0.0003713912,0.00009460268,0.001090068],"category_scores_gemma":[0.00006871245,0.0001261954,0.00007484971,0.000386417,0.0000656357,0.0002298908,0.00007545868,0.0003532919,0.00008265529],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004198199,"about_ca_system_score_gemma":0.0002869718,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9021015,"about_ca_topic_score_gemma":0.9890781,"domain_scores_codex":[0.9980135,0.00007289006,0.0002845902,0.0003709389,0.0003253274,0.0009327661],"domain_scores_gemma":[0.998653,0.0003656464,0.0001351805,0.000123907,0.00008612634,0.0006361541],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001335126,0.0001785792,0.04928852,0.00000724139,0.0001176286,0.0002159314,0.0001043998,0.000006971191,0.0551109,0.000304036,0.8883514,0.006180844],"study_design_scores_gemma":[0.0004878983,0.0004083862,0.2074243,0.00007057513,0.0001277595,0.0009283876,0.001273774,0.00002409794,0.01445647,0.00004860555,0.7738095,0.000940253],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9867106,0.0004804431,0.000003863238,0.004369081,0.001298452,0.0002620255,0.0002505331,0.0001053424,0.006519622],"genre_scores_gemma":[0.9905779,0.00002975232,0.00007119987,0.003478816,0.0008303103,0.00001328677,0.0001564016,0.000003431009,0.004838864],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1581358,"threshold_uncertainty_score":0.9998231,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2155804863","doi":"10.3852/mycologia.100.2.227","title":"DNA sequence analysis of herbarium specimens facilitates the revival of Botrytis mali, a postharvest pathogen of apple","year":2008,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Washington State University","keywords":"Biology; Botrytis cinerea; Herbarium; Botrytis; Clade; Botany; Sequence analysis; Pathogen; DNA sequencing; Phylogenetics; Gene; Microbiology; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02455167240927407,"gpt":0.2423023326857735,"spread":0.2177506602764994,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001663896,0.0001225026,0.0003477221,0.00006171776,0.00004330845,0.000002510919,0.0002576016,0.00009775367,0.0000658535],"category_scores_gemma":[0.0001473709,0.00008731986,0.0002566804,0.0003365987,0.000281296,0.000002954625,0.0001006714,0.00004472712,0.000002282186],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006384573,"about_ca_system_score_gemma":0.00006580117,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006266167,"about_ca_topic_score_gemma":0.0000380228,"domain_scores_codex":[0.9990435,0.00009385612,0.0003290062,0.0002259803,0.0001438624,0.000163772],"domain_scores_gemma":[0.9991756,0.00005180909,0.0002048418,0.0003894933,0.0001335751,0.00004469096],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007845367,0.00007183458,0.1022567,0.00003334634,0.0003553902,0.00001725167,0.00004698781,0.0002044708,0.8961936,0.0000497217,0.0006582093,0.00003405705],"study_design_scores_gemma":[0.0002052536,0.0004361921,0.7961149,0.00001329206,0.0005118996,0.00002383701,0.00017852,0.0001035346,0.1999944,0.00001467061,0.002248867,0.0001546461],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890332,0.001231906,0.0001123013,0.00002287909,0.00002606135,0.0001518968,0.008984812,0.000004375662,0.0004325933],"genre_scores_gemma":[0.9981756,0.0005732548,0.0003045558,0.00005008982,0.0000234917,0.00001037922,0.0006621401,0.000005917851,0.0001945572],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6961992,"threshold_uncertainty_score":0.3560801,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1955076713","doi":"10.3852/14-084","title":"Phylogenetic relationships and morphological evolution in <i>Lentinus</i> , <i>Polyporellus</i> and <i>Neofavolus</i> , emphasizing southeastern Asian taxa","year":2015,"lang":"en","type":"article","venue":"Mycologia","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Lentinus; Biology; Clade; Phylogenetic tree; Sensu; Cladistics; Phylogenetics; Internal transcribed spacer; Maximum parsimony; Sister group; Botany; Zoology; Evolutionary biology; Gene; Mushroom; Genus; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.02692778957038883,"gpt":0.2101746608531817,"spread":0.1832468712827929,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000516974,0.0001857124,0.0002207479,0.00003962523,0.0002014019,0.00007868702,0.0001323549,0.0002204126,0.0001487976],"category_scores_gemma":[0.000355565,0.00008791329,0.00003774208,0.0003148138,0.0000427676,0.0001349063,0.0001235603,0.0003347073,0.0001460903],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003324334,"about_ca_system_score_gemma":0.00001289656,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006369938,"about_ca_topic_score_gemma":0.0007719897,"domain_scores_codex":[0.9985446,0.0002573637,0.0002910077,0.0004026131,0.0001569149,0.0003475187],"domain_scores_gemma":[0.9989558,0.0006182579,0.0001042143,0.00006484594,0.00004506348,0.0002118237],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008428237,0.00008055879,0.9335145,0.000005118952,0.000005994385,0.00005006424,0.0001988254,0.00001188526,0.05953284,0.0006240847,0.002068125,0.003823704],"study_design_scores_gemma":[0.0004087238,0.000580666,0.9646121,0.00007269078,0.00003644248,0.0007225597,0.002465906,0.0006185069,0.000350837,0.005767426,0.02388099,0.0004831583],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.993434,0.001306771,0.00003839799,0.0008854828,0.000196154,0.0002739324,0.0002189456,0.00007348568,0.003572809],"genre_scores_gemma":[0.9987208,0.0001632828,0.0002613564,0.0002887244,0.0001357741,0.00002720047,0.0001823645,0.000001821793,0.0002186246],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.059182,"threshold_uncertainty_score":0.3585,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2120053388","doi":"10.1080/15572536.2005.11832882","title":"Molecular and morphological characterization of the willow rust fungus,<i>Melampsora epitea,</i>from arctic and temperate hosts in North America","year":2004,"lang":"en","type":"article","venue":"Mycologia","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Biology; Willow; Internal transcribed spacer; Botany; Temperate climate; Arctic; Urediniospore; Salicaceae; Rust (programming language); Phylogenetic tree; Taxonomy (biology); Temperate rainforest; Ecology; Woody plant; Spore","retraction":null,"screen_n_in":null,"score":{"opus":0.004477844536240211,"gpt":0.1930950885749479,"spread":0.1886172440387077,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000479071,0.0001252082,0.0001678219,0.00002236949,0.00005958324,0.00001228341,0.0000910215,0.0001013577,0.000008732668],"category_scores_gemma":[0.00007029992,0.00008261182,0.00003190878,0.0001214276,0.0002181042,0.000003513627,0.0001873696,0.00008595471,0.000001376276],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001073436,"about_ca_system_score_gemma":0.00002182246,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008967297,"about_ca_topic_score_gemma":0.00007140599,"domain_scores_codex":[0.9993075,0.00005301231,0.0001551015,0.0002645955,0.00006544333,0.0001544168],"domain_scores_gemma":[0.9996768,0.00000953457,0.00008000687,0.0001651804,0.00003584017,0.00003265842],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003687276,0.00004657146,0.2348523,0.000008986292,0.00002377687,0.00001092871,0.00009576573,0.00004334204,0.764273,0.00001941329,0.000006706722,0.0005823631],"study_design_scores_gemma":[0.0004670481,0.0002145394,0.9561542,0.00001631488,0.00001767541,0.00001050114,0.0000579379,0.000006077008,0.04225424,0.00003552051,0.000648942,0.0001170573],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986087,0.0006467503,0.00006355501,0.0003446624,0.0000612425,0.0001886824,0.00004951379,0.000005223772,0.00003165384],"genre_scores_gemma":[0.998296,0.0008737964,0.0001630083,0.0005149344,0.00003064185,0.00001680848,0.00007508293,0.000008390663,0.00002131023],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7220187,"threshold_uncertainty_score":0.3368812,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2100931348","doi":"10.3852/mycologia.99.4.592","title":"Baudoinia, a new genus to accommodate Torula compniacensis","year":2007,"lang":"en","type":"article","venue":"Mycologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Brandon University; Toronto Public Health; University of Toronto","funders":"","keywords":"Biology; Botany; Conidium; Genus; Dehiscence","retraction":null,"screen_n_in":null,"score":{"opus":0.01260988143068881,"gpt":0.2564848277794667,"spread":0.2438749463487779,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001767361,0.000145687,0.0001424291,0.00005031596,0.00006942124,0.00002222901,0.0002105125,0.0001365139,0.00008082785],"category_scores_gemma":[0.0001083246,0.0001347076,0.00008391785,0.0001150708,0.00002244559,0.000002055046,0.0001670434,0.00006000542,0.0002087665],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001464356,"about_ca_system_score_gemma":0.00006212835,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002989593,"about_ca_topic_score_gemma":0.0001238202,"domain_scores_codex":[0.9990542,0.00002450273,0.0001446698,0.000311421,0.00009856918,0.0003666248],"domain_scores_gemma":[0.9992957,0.00002197322,0.00003940405,0.0003048174,0.00004355725,0.0002945776],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002049444,0.00005004657,0.01411388,0.00000418087,0.00002976998,0.00005767178,0.00001257037,0.0000247059,0.8841501,0.00006171186,0.09298991,0.008300518],"study_design_scores_gemma":[0.0003949481,0.0003578458,0.3535303,0.000008085186,0.00002782225,0.0000376295,0.00003347139,0.000009949876,0.05964677,0.00002307786,0.5856217,0.0003083784],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914024,0.0004960501,0.003397635,0.0002267465,0.0002533619,0.0001963171,0.000242845,0.00003473093,0.003749882],"genre_scores_gemma":[0.9909079,0.00004626142,0.003842656,0.002889681,0.0003953977,0.000006205484,0.0002038027,0.00001731203,0.001690799],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8245033,"threshold_uncertainty_score":0.5493216,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}