{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":53,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":53,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"query_hash":"ab190219d928","filters":{"venue":"Mycopathologia"}},"results":[{"id":"W2133746904","doi":"10.1007/s11046-008-9109-0","title":"Update in Antifungal Therapy of Dermatophytosis","year":2008,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":325,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mediprobe Research (Canada); Sunnybrook Health Science Centre","funders":"","keywords":"Tinea capitis; Terbinafine; Dermatophyte; Medicine; Itraconazole; Dermatology; Antifungal; Antifungal drugs; Ketoconazole; Mycosis; Surgery","retraction":null,"screen_n_in":null,"score":{"opus":0.06484430462483853,"gpt":0.3654922756534763,"spread":0.3006479710286377,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005545326,0.0003273792,0.001866651,0.0002628659,0.00002126201,0.000004219415,0.0001218759,0.0002510139,0.0001244357],"category_scores_gemma":[0.00003280295,0.0002198298,0.0005568449,0.0003702213,0.00007168601,0.00002764493,0.0000431642,0.0002246888,0.0001627239],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000639545,"about_ca_system_score_gemma":0.0002275863,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001039024,"about_ca_topic_score_gemma":4.470604e-7,"domain_scores_codex":[0.998606,0.0001120274,0.0005390811,0.0003311865,0.0001719877,0.0002397094],"domain_scores_gemma":[0.9991444,0.00004630674,0.0002436982,0.0004526686,0.00003470348,0.00007820647],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004568307,0.0005845352,0.01542752,0.003604994,0.000109275,0.003522648,0.00001368607,3.074124e-8,0.000002421455,0.00001302774,0.0008143142,0.9758618],"study_design_scores_gemma":[0.002064082,0.0003130564,0.02199047,0.0110115,0.0004549088,0.001953589,0.000004411853,4.994143e-7,0.00002580542,0.00002232549,0.9618255,0.0003337874],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004654283,0.9933923,0.000001138448,0.000006546436,0.0001048868,0.0007467441,0.0001127053,0.00003491782,0.0009464672],"genre_scores_gemma":[0.002059003,0.9971528,0.0002181137,0.00007338821,0.00004404631,0.00008825229,0.0002316197,0.00004125271,0.00009154419],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9755281,"threshold_uncertainty_score":0.8964397,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3005239418","doi":"10.1007/s11046-020-00431-2","title":"Re-drawing the Maps for Endemic Mycoses","year":2020,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":311,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"National Institute of Neurological Disorders and Stroke; Medical Research Council","keywords":"Paracoccidioidomycosis; Histoplasmosis; Blastomycosis; Epidemiology; Endemic disease; Disease; Medical microbiology; Endemic diseases; Fungal disease; Medicine; Geography; Immunology; Dermatology; Environmental health; Pathology","retraction":null,"screen_n_in":null,"score":{"opus":0.1078369488844087,"gpt":0.3761982566235852,"spread":0.2683613077391766,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004101823,0.00036941,0.001638498,0.00008779165,0.0003117624,0.0000317405,0.0001799485,0.0002710257,0.00004145744],"category_scores_gemma":[0.00114165,0.0001941141,0.0007518917,0.0003113985,0.0001053123,0.00002332237,0.0001425785,0.0006241279,0.0001921372],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000111275,"about_ca_system_score_gemma":0.0001719208,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004664533,"about_ca_topic_score_gemma":0.000003067216,"domain_scores_codex":[0.9985402,0.0001160984,0.0004765279,0.000432887,0.0001281341,0.0003061348],"domain_scores_gemma":[0.9984945,0.0007283535,0.0002008188,0.0004356095,0.00007582688,0.00006489407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001901106,0.00004475506,0.00008434503,0.01389072,0.0002389892,0.000169738,0.0001789704,1.7545e-7,0.00000773627,0.0003996415,0.07969748,0.9052684],"study_design_scores_gemma":[0.0001592229,0.0002905768,0.00002142058,0.003580325,0.00157257,0.0003526541,0.0001278703,0.000001967457,0.000001728227,0.00008058619,0.9936227,0.0001883469],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.000003225925,0.9900594,0.0001249933,0.0004849687,0.0006800843,0.001572643,0.0001571153,0.0001750835,0.006742487],"genre_scores_gemma":[0.0000584029,0.9956104,0.0006737602,0.0005609191,0.0008677108,0.0007111139,0.0001118576,0.0000568513,0.001348995],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9139252,"threshold_uncertainty_score":0.7915743,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1985533724","doi":"10.1007/s11046-008-9099-y","title":"The New Species Concept in Dermatophytes—a Polyphasic Approach","year":2008,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":269,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Dermatophyte; Biology; Evolutionary biology; Taxonomy (biology); Phylogenetic tree; Species complex; Identification (biology); Zoology; Ecology; Genetics; Microbiology","retraction":null,"screen_n_in":null,"score":{"opus":0.04862389735595468,"gpt":0.3242173429087236,"spread":0.2755934455527689,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00006649727,0.0004762707,0.001558558,0.0001325142,0.0001385935,0.00003668137,0.0002676116,0.0002799922,0.00005924638],"category_scores_gemma":[0.0001233829,0.0002577147,0.000605938,0.0004299831,0.0001955453,0.00003614643,0.00009900001,0.0004603044,0.0003178094],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002009399,"about_ca_system_score_gemma":0.0006423954,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002057213,"about_ca_topic_score_gemma":0.000001321258,"domain_scores_codex":[0.9980971,0.0001504474,0.0005511061,0.0004715152,0.0002617186,0.0004680961],"domain_scores_gemma":[0.9987034,0.0001713992,0.0002207762,0.0006864926,0.00002492237,0.0001930347],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002389119,0.0002821288,0.0007847146,0.001490189,0.0001033745,0.002937551,0.00007392339,1.63067e-7,1.39947e-7,0.0002528989,0.02440858,0.9696425],"study_design_scores_gemma":[0.0009073819,0.00009634624,0.002240951,0.002189472,0.0004915279,0.002598365,0.00003103984,0.000001063621,5.926699e-7,0.00003426268,0.9911767,0.0002322675],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00002602574,0.98765,0.00001903298,0.00004485819,0.000236233,0.001239337,0.00004230662,0.00007490918,0.01066726],"genre_scores_gemma":[0.0001003417,0.9861568,0.0003211812,0.0001095313,0.0003307456,0.0001427601,0.0002450048,0.00005300191,0.01254065],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9694102,"threshold_uncertainty_score":0.9999875,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2510970655","doi":"10.1007/s11046-016-0045-0","title":"New Antifungal Agents and New Formulations Against Dermatophytes","year":2016,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":178,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mediprobe Research (Canada); University of Toronto","funders":"","keywords":"Terbinafine; Griseofulvin; Tinea capitis; Itraconazole; Ketoconazole; Dermatology; Medicine; Fluconazole; Antifungal; Dermatophyte; Antifungal drugs","retraction":null,"screen_n_in":null,"score":{"opus":0.0714317380953737,"gpt":0.3636699795396683,"spread":0.2922382414442947,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00004764877,0.0004184164,0.001211719,0.0001668918,0.00008973995,0.00003912103,0.0001012456,0.0002688181,0.0002946946],"category_scores_gemma":[0.0000969168,0.000255058,0.0003886916,0.000164516,0.00003323512,0.00008388497,0.0001049456,0.0001589062,0.000658425],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008741707,"about_ca_system_score_gemma":0.0005274661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009784377,"about_ca_topic_score_gemma":7.720016e-7,"domain_scores_codex":[0.998596,0.00004811307,0.00040762,0.0004478641,0.0001754737,0.0003249398],"domain_scores_gemma":[0.9987749,0.00008228836,0.0002014537,0.0004410746,0.00002956153,0.0004707226],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00000879535,0.00004752891,0.003430081,0.002062867,0.000119264,0.0006166299,0.000008299205,8.156583e-9,8.438792e-7,0.00007706489,0.01718264,0.976446],"study_design_scores_gemma":[0.001230127,0.00009912294,0.009919997,0.01150406,0.00164044,0.0004723083,0.000001334634,7.032988e-7,0.000001000667,0.0002624591,0.9745889,0.0002795411],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002079992,0.9952914,0.0001948222,0.00005332676,0.0002341506,0.0008653082,0.0001517709,0.0001116491,0.002889572],"genre_scores_gemma":[0.0001415013,0.9891307,0.001909083,0.0001868072,0.0003591187,0.00002765564,0.0003067785,0.00005668446,0.007881657],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9761664,"threshold_uncertainty_score":0.9999902,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2152274720","doi":"10.1007/s11046-005-2150-3","title":"Modeling effects of environment, insect damage, and Bt genotypes on fumonisin accumulation in maize in Argentina and the Philippines","year":2005,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":137,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph; Carleton University","funders":"","keywords":"Fumonisin; Biology; Insect; Genotype; Fusarium; Microbial ecology; Fumonisin B1; Gene–environment interaction; Agronomy; Ecology; Botany; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01098376585587211,"gpt":0.2361800508059536,"spread":0.2251962849500815,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002476819,0.00009891453,0.0001276128,0.00004770932,0.00003255162,0.00000854501,0.00006139974,0.00009000143,0.000002051776],"category_scores_gemma":[0.00006323605,0.00007430551,0.00002003775,0.00004104868,0.00007336107,0.000003340451,0.00006102744,0.00007198386,9.942203e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007679438,"about_ca_system_score_gemma":0.000007441001,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001659782,"about_ca_topic_score_gemma":0.0001279131,"domain_scores_codex":[0.9993574,0.00009574766,0.0001598939,0.0002015141,0.00005661097,0.0001288168],"domain_scores_gemma":[0.9997498,0.00002656537,0.00004073191,0.0001613817,0.000007703306,0.00001375983],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005828208,0.0000965935,0.05191582,0.00008426984,0.000008900428,0.00001315544,0.0004436706,0.02452581,0.9138111,0.0002526203,0.000008743581,0.008256499],"study_design_scores_gemma":[0.004941255,0.000461451,0.7184659,0.00009631788,0.00002803636,0.00001588075,0.00008961969,0.02017375,0.253974,0.0009811464,0.0004340978,0.0003385974],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960042,0.003299353,0.0002931088,0.00008264354,0.00001961039,0.0002062255,0.000002803551,0.000002404515,0.00008967053],"genre_scores_gemma":[0.9972256,0.002034016,0.0004693932,0.000146503,0.00004345571,0.00001405995,0.000008682147,0.000007696484,0.00005053333],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6665501,"threshold_uncertainty_score":0.3030091,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W309646519","doi":"10.1023/a:1014940523921","title":"Comparison of Canadian Fusarium graminearum isolates for aggressiveness, vegetative compatibility, and production of ergosterol and mycotoxins","year":2002,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":86,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true},"ca_institutions":"Canadian International Grains Institute; Agriculture and Agri-Food Canada","funders":"Western Grains Research Foundation","keywords":"Fusarium; Mycotoxin; Ergosterol; Biology; Inoculation; Trichothecene; Zearalenone; Veterinary medicine; Mycology; Fungi imperfecti; Horticulture; Agronomy; Botany; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.0496471004115602,"gpt":0.259220547688664,"spread":0.2095734472771038,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001942418,0.0001429919,0.0003525997,0.00004641787,0.0001396302,0.00001796738,0.0001139508,0.0001228201,0.00001860146],"category_scores_gemma":[0.0001485564,0.00005904543,0.00004528997,0.0003351471,0.0001936717,0.00008301066,0.00004701352,0.00008833007,0.00000116716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001161295,"about_ca_system_score_gemma":0.000003959622,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002564389,"about_ca_topic_score_gemma":0.0149356,"domain_scores_codex":[0.9990245,0.00007294465,0.0003009776,0.0003040001,0.00008384947,0.0002138065],"domain_scores_gemma":[0.99933,0.0001536868,0.0002185901,0.00006570468,0.0001441784,0.00008778121],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003772939,0.0001632323,0.2649576,0.00009797128,0.00001469562,0.000001299832,0.001069631,0.000004104028,0.7105411,0.000190638,0.000480892,0.02244104],"study_design_scores_gemma":[0.000260226,0.001711189,0.7861768,0.00006277112,0.0000473153,0.00002874415,0.0008611828,0.0004440487,0.2078854,0.0005664694,0.001712281,0.0002435666],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965461,0.001805834,0.000003229142,0.0004931727,0.0001351458,0.0005194204,0.0001998032,0.00001722359,0.0002800946],"genre_scores_gemma":[0.999072,0.000250466,0.0004126875,0.0000334597,0.00006478529,0.00002719502,0.00007199751,0.000001089944,0.00006627927],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5212192,"threshold_uncertainty_score":0.8334417,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2091769073","doi":"10.1007/s11046-011-9475-x","title":"A Decade of Experience: Cryptococcus gattii in British Columbia","year":2011,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"BC Centre for Disease Control; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Cryptococcus gattii; Cryptococcosis; Outbreak; Genotype; Biology; Cryptococcus; Virulence; Pathogen; Virology; Veterinary medicine; Immunology; Microbiology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.03721112855370502,"gpt":0.2783199178776995,"spread":0.2411087893239945,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000135355,0.00005686557,0.0002576571,0.00004659087,0.00004843031,0.00001148162,0.00005348548,0.00007865002,0.0007659892],"category_scores_gemma":[0.0002013293,0.00007525604,0.00005382875,0.0002360777,0.0001563163,0.00004119705,0.0000494068,0.0001318266,0.00002022557],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002683167,"about_ca_system_score_gemma":0.00002447025,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008652659,"about_ca_topic_score_gemma":0.007965799,"domain_scores_codex":[0.9992964,0.00002704559,0.0002360877,0.0001774389,0.00008464841,0.0001783696],"domain_scores_gemma":[0.999651,0.00002153229,0.00004805676,0.0001664158,0.00007146052,0.00004157299],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001684142,0.0002083623,0.9879213,0.00002951238,0.000005227954,0.0003799142,0.001843837,1.199223e-7,0.006023454,0.00001625182,0.001217131,0.002338057],"study_design_scores_gemma":[0.0005160295,0.0003590902,0.9958169,0.0001086173,0.00001186165,0.0002399486,0.001070226,0.000004081694,0.00140191,0.0001515912,0.0002458931,0.00007383565],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9839495,0.00037291,0.00002922673,0.000008519769,0.0001353236,0.0002433596,0.000006474488,0.00004139143,0.01521329],"genre_scores_gemma":[0.997329,0.00009476771,0.001620106,0.00009634386,0.00002221547,0.0001053839,0.000001556217,0.000007661769,0.0007229499],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01449034,"threshold_uncertainty_score":0.9979488,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1997627643","doi":"10.1007/s11046-008-9163-7","title":"Clinical Characteristics and Outcomes in Patients with Pulmonary Blastomycosis","year":2008,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"","keywords":"Blastomycosis; Medicine; Blastomyces dermatitidis; Chest radiograph; Pneumonia; Intensive care unit; Internal medicine; Retrospective cohort study; Blastomyces; Intensive care medicine; Lung; Dermatology","retraction":null,"screen_n_in":null,"score":{"opus":0.02015512623714954,"gpt":0.2781383887914025,"spread":0.2579832625542529,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001200857,0.0001043002,0.0003594346,0.00006940576,0.00007604904,0.000003475295,0.00002200636,0.00006774798,0.00001455844],"category_scores_gemma":[0.0001741429,0.00006734774,0.00003395173,0.00009789475,0.0001629893,0.00003532142,0.00004372895,0.0001883063,0.00001833603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001810269,"about_ca_system_score_gemma":0.00001596071,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008383139,"about_ca_topic_score_gemma":0.000002591752,"domain_scores_codex":[0.9993045,0.00003409004,0.0002373349,0.0001908182,0.00009184894,0.000141462],"domain_scores_gemma":[0.9996188,0.00008284704,0.0000479447,0.0001381148,0.00005949314,0.000052859],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001463119,0.0004609539,0.9966003,0.00001227636,0.00001329535,0.0002823859,0.00005327418,7.308034e-8,0.00001202831,0.000005285347,0.0000982004,0.002315663],"study_design_scores_gemma":[0.0009253148,0.0007600613,0.9978424,0.00002822772,0.00002359635,0.00008088074,0.00001656622,0.00000831395,0.000003049654,0.00000337809,0.0002290575,0.00007912461],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983705,0.00005240411,0.000009312423,0.000099833,0.000105784,0.0001750918,0.00001191058,0.00003675425,0.001138355],"genre_scores_gemma":[0.9985549,0.000179406,0.0005964991,0.0002843828,0.00003061177,0.00001415045,0.00001069486,0.00000894949,0.0003204448],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002236539,"threshold_uncertainty_score":0.2746361,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2015908287","doi":"10.1007/s11046-005-5257-7","title":"Isolation and metabolite production by Penicillium roqueforti, P. paneum and P. crustosum isolated in Canada","year":2005,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":58,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Agriculture and Agri-Food Canada; Carleton University","funders":"","keywords":"Penicillium roqueforti; Metabolite; Secondary metabolite; Penicillium; Silage; Food science; Biology; Chemistry; Animal science; Biochemistry","retraction":null,"screen_n_in":null,"score":{"opus":0.005022148653936325,"gpt":0.1660167521766677,"spread":0.1609946035227314,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001976358,0.0001513006,0.0001893642,0.00001172342,0.0001126975,0.00003573411,0.00008281598,0.00009704598,0.00005460332],"category_scores_gemma":[0.00004849449,0.00005940662,0.00001713957,0.0002321721,0.00003115611,0.000185525,0.00005060923,0.0001638904,0.00000374618],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007245142,"about_ca_system_score_gemma":0.00001682305,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1307939,"about_ca_topic_score_gemma":0.6416391,"domain_scores_codex":[0.9989403,0.00007249012,0.0002374274,0.000364815,0.0001227632,0.0002622399],"domain_scores_gemma":[0.9997344,0.0000375236,0.00008230572,0.00004170576,0.00003366702,0.0000703731],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003649542,0.0000404858,0.1048203,0.000006413693,0.00000446344,0.000007841153,0.0001070654,0.00001131604,0.8202423,0.00003545229,0.003634319,0.07105356],"study_design_scores_gemma":[0.0001710556,0.00015645,0.9582056,0.00001391775,0.0000176898,0.000117701,0.0003510382,0.0003472322,0.009367267,0.00008492228,0.03084916,0.0003179512],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943435,0.003158135,0.000003223496,0.00177807,0.0001027339,0.000221648,0.00003984337,0.00003577015,0.0003170322],"genre_scores_gemma":[0.9982991,0.0006662114,0.000126809,0.0003674614,0.0001518281,0.00001899107,0.00006307787,9.898182e-7,0.0003055625],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8533853,"threshold_uncertainty_score":0.8749942,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1974929033","doi":"10.1023/b:myco.0000012218.27359.ec","title":"Analysis of Fusarium Graminearum Mycotoxins in Different Biological Matrices by LC/MS","year":2004,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":48,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; University of Ottawa","funders":"","keywords":"Mycotoxin; Zearalenone; Fusarium; Biology; Larva; Extraction (chemistry); Food science; Chromatography; Chemistry; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.01252859986616862,"gpt":0.2131228173551843,"spread":0.2005942174890157,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003184181,0.0002901463,0.0006705213,0.00008898361,0.00009393913,0.00003791147,0.0004991511,0.0003158582,0.0002660684],"category_scores_gemma":[0.00006764603,0.00008197902,0.0003103395,0.00155903,0.0001223434,0.0000766654,0.0001650222,0.0002409796,0.00003099431],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005778173,"about_ca_system_score_gemma":0.000003661413,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003311816,"about_ca_topic_score_gemma":0.0003306199,"domain_scores_codex":[0.9980376,0.0001289854,0.0005227259,0.0005298592,0.000263456,0.0005174165],"domain_scores_gemma":[0.9994272,0.0001406891,0.0001505859,0.0001282419,0.00005205625,0.0001012329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002731889,0.0005047579,0.1441395,0.000004870933,0.00005506368,0.00002521614,0.0001067843,0.00004785027,0.8527371,0.0002334077,0.00008496987,0.002033184],"study_design_scores_gemma":[0.0002850424,0.0007286587,0.864342,0.000009201258,0.0001314082,0.000008153749,0.0002156968,0.00001729439,0.1322874,0.0005222858,0.001129557,0.0003233467],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973168,0.000536351,0.0000233236,0.0003988804,0.0001011414,0.0002557823,0.0003942059,0.00008624793,0.0008872225],"genre_scores_gemma":[0.9982626,0.0002654181,0.0000799904,0.0001766085,0.0000920763,0.00003828694,0.001021906,0.000001163306,0.00006199072],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7204497,"threshold_uncertainty_score":0.3343007,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W270292379","doi":"10.1023/a:1011964306510","title":"Production of culmorin compounds and other secondary metabolites by Fusarium culmorum and F. graminearum strains isolated from Norwegian cereals","year":2001,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":46,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University","funders":"","keywords":"Fusarium culmorum; Norwegian; Fusarium; Biology; Mycotoxin; Fungi imperfecti; Medical microbiology; Microbiology; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.01264580041155743,"gpt":0.2096987681362625,"spread":0.197052967724705,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002335064,0.0002268354,0.0003456079,0.00001788265,0.0001595041,0.00006292314,0.0001579972,0.0001837233,0.0001661644],"category_scores_gemma":[0.00004642269,0.00009026327,0.00005360417,0.0002827731,0.0001879109,0.0001410914,0.00009455014,0.0001953219,0.000007236784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008957109,"about_ca_system_score_gemma":0.000004170674,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004113231,"about_ca_topic_score_gemma":0.0001212718,"domain_scores_codex":[0.9986483,0.0001186521,0.0002964307,0.0004915773,0.0001467946,0.0002981722],"domain_scores_gemma":[0.9995244,0.00006482982,0.0001534737,0.00009976871,0.00006029296,0.00009719285],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003440361,0.0001095148,0.07237189,0.000006762508,0.00001936392,0.000007571342,0.0001582949,2.286534e-7,0.9113729,0.0000909039,0.001302361,0.01452578],"study_design_scores_gemma":[0.000339888,0.0006548861,0.8831351,0.00002421149,0.00006981873,0.0001957881,0.0009584295,0.00002122738,0.05797945,0.0009576984,0.0552128,0.0004507572],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994022,0.001826645,0.000006346399,0.0006771882,0.0001923151,0.0002488769,0.0006546077,0.00007847198,0.002293546],"genre_scores_gemma":[0.997915,0.0004186151,0.0002133938,0.0002465402,0.0002322964,0.00001248621,0.0003363814,0.00000228674,0.0006230532],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8533935,"threshold_uncertainty_score":0.3680829,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2031748785","doi":"10.1007/s11046-009-9196-6","title":"Invasive Fungal Infection in Haematopoietic Stem Cell Transplant Recipients: Epidemiology from the Transplant Physician’s Viewpoint","year":2009,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Manitoba Health","funders":"","keywords":"Stem cell; Transplantation; Medicine; Immunology; Hematopoietic stem cell transplantation; Graft-versus-host disease; Neutropenia; Hematopoietic stem cell; Haematopoiesis; Internal medicine; Biology; Chemotherapy","retraction":null,"screen_n_in":null,"score":{"opus":0.0721597278851675,"gpt":0.3310335910796381,"spread":0.2588738631944706,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002031353,0.0008341282,0.004206929,0.0001744159,0.0001409346,0.00001793024,0.0003940298,0.0009678618,0.00006856108],"category_scores_gemma":[0.0002049215,0.0004986408,0.001147628,0.0005078293,0.0002527601,0.00008600968,0.00004069841,0.001976321,0.0003541133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004480732,"about_ca_system_score_gemma":0.0004484833,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002310411,"about_ca_topic_score_gemma":0.0005264356,"domain_scores_codex":[0.9935505,0.002308122,0.00182097,0.001219134,0.0003106818,0.0007906326],"domain_scores_gemma":[0.995575,0.002410702,0.0006590522,0.001119996,0.00007226192,0.0001630198],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.000542938,0.001111987,0.1135981,0.01641913,0.0001786934,0.003899067,0.001874296,0.000004543686,0.00008027259,0.0001847532,0.001640456,0.8604658],"study_design_scores_gemma":[0.003632066,0.002539037,0.5451786,0.17337,0.008831571,0.001704711,0.0002786832,0.0000187278,0.0001573259,0.00170278,0.2598832,0.002703299],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.03555955,0.9599894,0.0002532464,0.0002108325,0.0005207341,0.002153068,0.0004327194,0.0001071398,0.0007733123],"genre_scores_gemma":[0.02897269,0.9678205,0.00009586854,0.001752757,0.000296679,0.0002041466,0.0006160021,0.00005795289,0.0001833818],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8577625,"threshold_uncertainty_score":0.9997465,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3175619933","doi":"10.1007/s11046-021-00575-9","title":"Update on Pulmonary Cryptococcosis","year":2021,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Hamilton Regional Laboratory Medicine Program; Hamilton General Hospital","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cryptococcosis; Medical microbiology; Cryptococcus neoformans; Epidemiology; Biology; Intensive care medicine; Immunology; Cryptococcus; Transmission (telecommunications); Medicine; Pathology; Microbiology","retraction":null,"screen_n_in":null,"score":{"opus":0.08044121590908095,"gpt":0.3816165010124911,"spread":0.3011752851034101,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002172022,0.0004311489,0.002137534,0.0002199855,0.0001454336,0.0000268082,0.0001006949,0.0003702079,0.000491655],"category_scores_gemma":[0.0002305688,0.0002934409,0.0007618145,0.0004565059,0.00007220654,0.00002153527,0.0001494753,0.0007189096,0.0014489],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001393759,"about_ca_system_score_gemma":0.0001472575,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003176611,"about_ca_topic_score_gemma":4.292449e-7,"domain_scores_codex":[0.9983677,0.0001561048,0.0004462032,0.0005550325,0.0001733104,0.0003016065],"domain_scores_gemma":[0.9988945,0.0001426019,0.0001501219,0.0006330183,0.00009147859,0.00008828664],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00000590842,0.0002296692,0.00006117489,0.005648108,0.0001368038,0.002675394,0.00000641,9.145079e-8,0.000001684348,0.0004259073,0.01603606,0.9747728],"study_design_scores_gemma":[0.0000811646,0.000209983,0.0001213622,0.01247799,0.0009881897,0.001389237,0.00001072219,5.280045e-7,0.000001708078,0.00001266246,0.9844549,0.0002515395],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00001119757,0.9657949,0.000009736258,0.00007709343,0.0005764677,0.0006676596,0.00006163613,0.000146722,0.03265463],"genre_scores_gemma":[0.00001424804,0.9955506,0.0004130531,0.0003888899,0.0003840589,0.0004024795,0.0002707495,0.00005535675,0.002520503],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9745212,"threshold_uncertainty_score":0.9999518,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2475392292","doi":"10.1007/s11046-016-0040-5","title":"Increased Risk of Tinea Pedis and Onychomycosis Among Swimming Pool Employees in Netanya Area, Israel","year":2016,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mediprobe Research (Canada); University of Toronto","funders":"","keywords":"Medicine; Population; Dermatology; Environmental health","retraction":null,"screen_n_in":null,"score":{"opus":0.01026545095670121,"gpt":0.2416303778978757,"spread":0.2313649269411745,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002000689,0.0001918992,0.000410839,0.0001666193,0.00004150172,0.000008692165,0.00006817804,0.0001025112,0.0001017125],"category_scores_gemma":[0.0005304471,0.0001179804,0.00009627486,0.0001724106,0.0001352849,0.00009320671,0.00006507496,0.00009321675,0.00002255355],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005224708,"about_ca_system_score_gemma":0.00003752865,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009500402,"about_ca_topic_score_gemma":0.0001007783,"domain_scores_codex":[0.9988151,0.00008332918,0.0003178246,0.0003375535,0.0001749917,0.0002712306],"domain_scores_gemma":[0.9991219,0.0001834378,0.0001565311,0.0003229831,0.00005511103,0.0001600472],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002663324,0.0003466801,0.984843,0.00004149207,0.00004214453,0.0003294017,0.00006702296,2.433526e-7,0.003534936,0.00001390095,0.0001031522,0.01041177],"study_design_scores_gemma":[0.003336331,0.0004344129,0.9933797,0.0003132308,0.0002801789,0.00002900938,0.0001107015,0.00001973545,0.001827388,0.0001128686,0.00003032294,0.0001261347],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978856,0.0008529156,0.00005970464,0.00006398647,0.00004663146,0.000329502,0.0001261658,0.00005056972,0.0005849664],"genre_scores_gemma":[0.9986696,0.0005091273,0.0004362063,0.00005648205,0.0000380135,0.00002805798,0.00001550249,0.00002128177,0.000225702],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01028563,"threshold_uncertainty_score":0.4811101,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2044177399","doi":"10.1007/s11046-007-0091-8","title":"Toxins from strains of Penicillium chrysogenum isolated from buildings and other sources","year":2007,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Danmarks Tekniske Universitet","keywords":"Clade; Penicillium chrysogenum; Biology; Dominance (genetics); Microbial ecology; Penicillin; Microbiology; Bacteria; Phylogenetics; Antibiotics; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.00969512074212919,"gpt":0.2282945770768303,"spread":0.2185994563347012,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000159565,0.0001633321,0.0001922691,0.00003648541,0.00004994908,0.00001540955,0.00015542,0.0001964192,0.00007324371],"category_scores_gemma":[0.00007182783,0.0001443514,0.00007433975,0.00005713293,0.0001126122,0.000003361415,0.0001053253,0.00007161565,0.000007053626],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004839164,"about_ca_system_score_gemma":0.00002123414,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002092265,"about_ca_topic_score_gemma":0.0001003654,"domain_scores_codex":[0.9990473,0.00003492434,0.0002252332,0.000361423,0.00009363324,0.0002374683],"domain_scores_gemma":[0.9994866,0.00002817564,0.0001066898,0.0002463828,0.00003602263,0.00009609256],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001199442,0.00004832667,0.1220463,0.000004483687,0.00002882292,0.00003317773,0.00007951289,0.000002583438,0.8766436,0.00002005544,0.0001904597,0.00078275],"study_design_scores_gemma":[0.0006277842,0.0003642735,0.5524777,0.000031102,0.00007643236,0.00002341398,0.0002789442,0.00003358997,0.4376963,0.0001499792,0.007900742,0.0003397733],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895655,0.002787613,0.002426829,0.0000111137,0.00008595824,0.00009331546,0.004340786,0.00002045957,0.0006684459],"genre_scores_gemma":[0.9975495,0.0001083431,0.001409873,0.0003195808,0.0001698605,0.000002481996,0.0003308789,0.00001880978,0.00009063095],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4389473,"threshold_uncertainty_score":0.5886478,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2090024645","doi":"10.1007/s11046-005-0087-1","title":"Reduction of Deoxynivalenol in Barley by Treatment with Aqueous Sodium Carbonate and Heat","year":2005,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":33,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba; Agriculture and Agri-Food Canada","funders":"","keywords":"Sodium carbonate; Chemistry; Animal science; Sodium; Hordeum vulgare; Aqueous solution; Food science; Poaceae; Agronomy; Biology","retraction":null,"screen_n_in":null,"score":{"opus":0.007001618341243279,"gpt":0.1851254432071271,"spread":0.1781238248658839,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009280167,0.0001413229,0.0001983095,0.00001259027,0.00005017706,0.0000140893,0.00008077321,0.0001020413,0.00005356237],"category_scores_gemma":[0.000005491027,0.00004397621,0.00002890747,0.0001731827,0.0000654901,0.00006808044,0.00002309611,0.00007433294,0.000005166065],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004481951,"about_ca_system_score_gemma":0.000004256626,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002763516,"about_ca_topic_score_gemma":0.0004932118,"domain_scores_codex":[0.9992177,0.00005352471,0.000167867,0.0002649275,0.00009810237,0.0001978746],"domain_scores_gemma":[0.9998037,0.00003075455,0.00004474543,0.00004901118,0.00002362101,0.00004820394],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009262688,0.0002222891,0.01670017,0.000004907288,0.000006684244,0.0000177006,0.0002493584,0.000009191925,0.8996644,0.0000369473,0.000325442,0.08267025],"study_design_scores_gemma":[0.002504718,0.01202742,0.4363795,0.0001502328,0.000093896,0.001239107,0.001756142,0.0001857479,0.4949283,0.0003317544,0.04924954,0.001153695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943735,0.001682069,6.676519e-7,0.0004967309,0.00003069767,0.0002141921,0.00003267956,0.00003603341,0.003133421],"genre_scores_gemma":[0.9987066,0.0005279566,0.0002248173,0.00004345416,0.00009735949,0.00002809002,0.0000298438,8.645018e-7,0.0003409811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4196793,"threshold_uncertainty_score":0.1793298,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2054195547","doi":"10.1007/s11046-006-0066-1","title":"Isolation of Cryptococcus laurentii from Canada Goose guano in rural upstate New York","year":2006,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Cryptococcus; Cryptococcus gattii; Guano; Biology; Cryptococcus neoformans; Microbiology; Cryptococcosis; Isolation (microbiology); Zoology; Ecology","retraction":null,"screen_n_in":null,"score":{"opus":0.01192088076699589,"gpt":0.2298990298564465,"spread":0.2179781490894507,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007459864,0.0001044951,0.000254167,0.00006445151,0.00003903431,0.000005919257,0.00003901796,0.00005532953,0.0001472375],"category_scores_gemma":[0.00005383108,0.00008571971,0.00004157106,0.0001990839,0.00003149255,0.00003016686,0.00002363165,0.0001194414,0.00001118583],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001074371,"about_ca_system_score_gemma":0.0001676956,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7677129,"about_ca_topic_score_gemma":0.5822314,"domain_scores_codex":[0.9992911,0.00003026336,0.0002736852,0.0001315488,0.0001162335,0.0001572232],"domain_scores_gemma":[0.9996369,0.00005122948,0.00007912494,0.0001569343,0.00004222444,0.00003351524],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007640282,0.0000685694,0.9436263,0.00001337608,0.000009912914,0.0000696108,0.0001209083,0.00009959424,0.03059699,0.0001704827,0.02431208,0.0008357494],"study_design_scores_gemma":[0.0008237968,0.0001087647,0.9947312,0.00006663045,0.00002767733,0.000008681426,0.00020767,0.00009575726,0.001979975,0.0007409498,0.001122602,0.00008625761],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937104,0.001029933,0.0001852923,0.0002382716,0.000304926,0.000192846,0.00003900913,0.00002853011,0.004270816],"genre_scores_gemma":[0.9972447,0.00001591272,0.001449257,0.00009382192,0.0001247394,0.00001029069,0.00006232655,0.000008198558,0.0009907259],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1854815,"threshold_uncertainty_score":0.4253918,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3023554914","doi":"10.1007/s11046-020-00451-y","title":"First Case of Rhinocerebral Mucormycosis Caused by Lichtheimia ornata, with a Review of Lichtheimia Infections","year":2020,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Natural Science Foundation of China","keywords":"Mucormycosis; Zygomycosis; Dermatology; Medicine; Biology; Amphotericin B; Surgery; Antifungal","retraction":null,"screen_n_in":null,"score":{"opus":0.03095999027508064,"gpt":0.3250769074308259,"spread":0.2941169171557453,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006590321,0.0007242565,0.004722173,0.0001778535,0.0001089867,0.0000118136,0.0003039004,0.0004886451,0.0005181324],"category_scores_gemma":[0.001169609,0.0004772607,0.0009458425,0.001214407,0.0003794267,0.00008806624,0.0001462947,0.0009274458,0.00007658192],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001892539,"about_ca_system_score_gemma":0.0008350651,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001538428,"about_ca_topic_score_gemma":0.0001583165,"domain_scores_codex":[0.9964318,0.0003208081,0.001592876,0.0008250696,0.0004106525,0.0004187691],"domain_scores_gemma":[0.9963917,0.0004021748,0.001252751,0.001283505,0.0003967052,0.0002731615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000154541,0.0009937851,0.005004539,0.7670132,0.0009671371,0.008027314,0.0002275137,1.693181e-7,0.00002860838,0.000133663,0.0247301,0.1927194],"study_design_scores_gemma":[0.0007559601,0.002103188,0.0002880401,0.2233855,0.008691955,0.007691248,0.00006113685,0.000003571568,0.00003677233,0.000006310623,0.756341,0.0006353331],"study_design_candidate":"systematic_review","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0008774806,0.9943285,0.00009288685,0.0001276247,0.00009014933,0.002114125,0.0009350125,0.0001004395,0.001333759],"genre_scores_gemma":[0.003346958,0.9950066,0.0004380074,0.0002804924,0.00008077452,0.0001669458,0.0002951528,0.0000958817,0.000289166],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.731611,"threshold_uncertainty_score":0.9997679,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3127882255","doi":"10.1007/s11046-020-00523-z","title":"Identification of Alkaloid Compounds Arborinine and Graveoline from Ruta angustifolia (L.) Pers for their Antifungal Potential against Isocitrate lyase (ICL1) gene of Candida albicans","year":2021,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Plant chemical constituents analysis","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Isocitrate lyase; Biology; Candida albicans; Glyoxylate cycle; Antifungal drug; Microbiology; Corpus albicans; Alkaloid; Pharmacology; Biochemistry; Enzyme; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.01138702106258406,"gpt":0.2065758998562673,"spread":0.1951888787936833,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002315335,0.0001633045,0.0004016047,0.00002015223,0.00009977227,0.00004031049,0.0001951298,0.0001202314,0.00008061471],"category_scores_gemma":[0.0001865153,0.00007817965,0.0001585123,0.0002770935,0.0002092214,0.00006048046,0.00008435201,0.00009053323,0.000001176573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001745317,"about_ca_system_score_gemma":0.00002338683,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002981599,"about_ca_topic_score_gemma":0.0001246378,"domain_scores_codex":[0.9987122,0.00005805791,0.0004627592,0.0003967878,0.0001579944,0.0002121541],"domain_scores_gemma":[0.9990878,0.0002148199,0.0002830983,0.0001104502,0.0002225628,0.00008133658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004385402,0.00009225225,0.01404107,0.00001179942,0.00005067371,0.00002372529,0.00004667363,0.00002142038,0.9836538,0.0000465709,0.00009429339,0.001873822],"study_design_scores_gemma":[0.0004439114,0.00005511038,0.08286588,0.00003420222,0.0001747676,0.0000181133,0.0004229882,0.001297423,0.9140674,0.0002338758,0.0001615235,0.0002247526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949693,0.0004758181,0.0001342691,0.0001874664,0.0001368318,0.0001290023,0.003884952,0.00002272135,0.00005965557],"genre_scores_gemma":[0.9971674,0.000169223,0.0004523603,0.00008028686,0.000103586,0.000009346025,0.001944293,0.000001686949,0.00007179327],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06958639,"threshold_uncertainty_score":0.3188074,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3044016389","doi":"10.1007/s11046-020-00475-4","title":"Intraspecific Diversity and Taxonomy of Emmonsia crescens","year":2020,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Natural Science Foundation of China","keywords":"Biology; Blastomyces; Intraspecific competition; Zoology; Taxonomy (biology); Genetic diversity; Lineage (genetic); Budding; Evolutionary biology; Rodent; Blastomyces dermatitidis; Ecology; Genetics; Population; Gene; Immunology; Blastomycosis","retraction":null,"screen_n_in":null,"score":{"opus":0.0327706309311335,"gpt":0.2033040482952096,"spread":0.1705334173640761,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004691679,0.00008311756,0.0001144157,0.00001265513,0.00009607856,0.000004908516,0.00009989309,0.00006722189,0.00001680166],"category_scores_gemma":[0.00007666172,0.00007679953,0.0000422044,0.00004204732,0.00008597216,0.000001990914,0.0004765294,0.00004390534,0.00000529296],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000001822621,"about_ca_system_score_gemma":0.00001254271,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003560677,"about_ca_topic_score_gemma":0.000001435136,"domain_scores_codex":[0.9994974,0.00003128345,0.00009290344,0.0002180798,0.00005092565,0.0001094408],"domain_scores_gemma":[0.9997172,0.000006642151,0.00004339071,0.0001135775,0.00002705932,0.00009208669],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008290838,0.00002183562,0.2296486,0.00001888965,0.00000864901,0.00003952928,0.00005180179,0.000002584658,0.7675593,0.00006369583,0.001902398,0.0005997404],"study_design_scores_gemma":[0.0005320333,0.00059797,0.9239175,0.00001166386,0.0000508632,0.00004686379,0.0002143436,0.00005004127,0.06214748,0.00002779934,0.01213172,0.0002717491],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972604,0.0006957636,0.0005492554,0.00005134937,0.00002981505,0.00009951597,0.0003539291,0.0000113442,0.0009486322],"genre_scores_gemma":[0.9987719,0.0001822116,0.0006252903,0.0002684454,0.00006881978,0.000003718525,0.00005365597,0.000004725551,0.00002123643],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7054119,"threshold_uncertainty_score":0.3131794,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2254051985","doi":"10.1023/a:1022968121285","title":"Immunocytochemical localization of stachylysin in Stachybotrys chartarum","year":2003,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Food Quality and Safety Studies","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Saint Mary's University","funders":"Case Western Reserve University","keywords":"Spore; Aspergillus fumigatus; Hemolysin; Microbiology; Biology; In vivo; Mycelium; Staining; Chemistry; Biochemistry; Virulence; Botany","retraction":null,"screen_n_in":null,"score":{"opus":0.01963490344886092,"gpt":0.2241638918670885,"spread":0.2045289884182276,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004739702,0.0001010972,0.0002172086,0.00001291894,0.00006450898,0.000007794091,0.0001167313,0.00009462675,0.0001371364],"category_scores_gemma":[0.0002433919,0.00004193908,0.00005407593,0.0003593534,0.00009043966,0.00005579493,0.00003822231,0.00009883693,0.00001603667],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002131408,"about_ca_system_score_gemma":0.00000568043,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000699248,"about_ca_topic_score_gemma":0.0001239205,"domain_scores_codex":[0.9989757,0.0001922078,0.0002930496,0.00019696,0.0001299852,0.0002121175],"domain_scores_gemma":[0.9996848,0.000112355,0.00007728555,0.00005739453,0.00004247461,0.00002574713],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000114525,0.0004255591,0.2237934,0.00003530361,0.00001256918,0.00003515658,0.0006285902,0.000105913,0.7572857,0.007258486,0.0003390029,0.009965813],"study_design_scores_gemma":[0.001123888,0.001414093,0.7353378,0.000116707,0.0000288755,0.00006572543,0.005732782,0.0002324717,0.2228218,0.008977873,0.02325382,0.0008941465],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970198,0.0004976416,0.00006353553,0.0002038639,0.00005942645,0.0001213785,0.00002459092,0.00002931844,0.001980444],"genre_scores_gemma":[0.9995349,0.00007704146,0.0001359702,0.0001232343,0.00001643965,0.00001050806,0.00003189709,5.63448e-7,0.00006943863],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5344638,"threshold_uncertainty_score":0.1710226,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2725608143","doi":"10.1007/s11046-017-0163-3","title":"Cryptococcosis in HIV-negative Patients with Renal Dialysis: A Retrospective Analysis of Pooled Cases","year":2017,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"National Key Research and Development Program of China; Science and Technology Commission of Shanghai Municipality; Second Military Medical University; National Natural Science Foundation of China","keywords":"Cryptococcosis; Cryptococcus neoformans; Dialysis; Peritoneal dialysis; Medicine; Cryptococcus gattii; Cryptococcus; Internal medicine; Hemodialysis; Medical microbiology; Mycosis; Intensive care medicine; Immunology; Biology; Microbiology","retraction":null,"screen_n_in":null,"score":{"opus":0.01442320396667073,"gpt":0.2756012537957698,"spread":0.2611780498290991,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001927026,0.0001552197,0.0007453397,0.0004541494,0.0002097667,0.0000223393,0.00009133528,0.00006858336,0.00008109465],"category_scores_gemma":[0.001322631,0.0001056102,0.0001676491,0.0006192452,0.0002482754,0.00009905715,0.00007935947,0.0001639209,0.000006718791],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001170357,"about_ca_system_score_gemma":0.00002949449,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004423859,"about_ca_topic_score_gemma":0.0007474105,"domain_scores_codex":[0.998968,0.00005858931,0.0002726631,0.0003071123,0.0002059258,0.0001876813],"domain_scores_gemma":[0.998688,0.0001056518,0.0002962701,0.0005163648,0.0003483569,0.0000453232],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003321689,0.0003463763,0.9969909,0.00001143413,0.0009234035,0.0001270579,0.0004537814,0.0000262235,0.0004278906,0.00005205515,0.00009966496,0.0002090092],"study_design_scores_gemma":[0.00157083,0.0008011913,0.9941317,0.00008484739,0.002303152,0.000003443027,0.0001564053,0.00008229705,0.0007026383,0.00004472955,0.00000708431,0.0001117105],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956281,0.00004703017,0.00007659638,0.00008815415,0.00003377768,0.0003346322,0.0001111027,0.00002231411,0.003658334],"genre_scores_gemma":[0.9988788,0.00002666186,0.0007883654,0.00003754603,0.00002176702,0.00008260679,0.00002465582,0.000008894337,0.0001307436],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003527591,"threshold_uncertainty_score":0.4306658,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2162777232","doi":"10.1023/a:1022920205355","title":"Histological, immunohistochemical and morphometric changes in lung tissue in juvenile mice experimentally exposed to Stachybotrys chartarum spores","year":2003,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":22,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Saint Mary's University","funders":"","keywords":"Spore; Cladosporium cladosporioides; Pathology; Biology; Lung; Hemosiderin; Microbiology; Immunology; Internal medicine; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.01298421879034154,"gpt":0.2503993486699551,"spread":0.2374151298796136,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006716801,0.0002299178,0.0003544633,0.0001973324,0.00008169701,0.00002471899,0.0002490728,0.000196105,0.001246125],"category_scores_gemma":[0.0002301674,0.0002226893,0.00002780785,0.0006854171,0.0002022182,0.0001026534,0.0002023382,0.0002620335,0.0001496029],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000496205,"about_ca_system_score_gemma":0.00001376224,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003476576,"about_ca_topic_score_gemma":0.0003007381,"domain_scores_codex":[0.9981824,0.0002066272,0.0003528236,0.0005678202,0.0001768508,0.0005135448],"domain_scores_gemma":[0.9994995,0.00006245452,0.00007838528,0.0002452973,0.000005419376,0.0001089477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005982699,0.0001980719,0.03220144,0.00001167103,0.000001187037,0.0002230524,0.002140958,0.0000268112,0.9629108,0.00007908197,0.001329005,0.0008180835],"study_design_scores_gemma":[0.001932161,0.0007586887,0.1298371,0.00006033446,0.00001134246,0.0002338823,0.001701752,0.00002643693,0.846148,0.0001366172,0.01824941,0.0009042154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955285,0.001063884,0.00005577261,0.0002276076,0.0001418351,0.0004876929,0.00001372246,0.00003872346,0.002442282],"genre_scores_gemma":[0.9956468,0.00004489987,0.002897727,0.000810709,0.00001173098,0.00008837099,0.00001385479,0.00001579601,0.0004701419],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1167628,"threshold_uncertainty_score":0.9996669,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3091758525","doi":"10.1007/s11046-020-00491-4","title":"Cryptococcus Neoformans Meningitis Cases Among China’s HIV-Infected Population may have been Severely Under-Reported","year":2020,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China","keywords":"Medical microbiology; Epidemiology; Cryptococcosis; Meningitis; Cryptococcus neoformans; Cryptococcal meningitis; Medicine; Population; Human immunodeficiency virus (HIV); China; Immunology; Cryptococcus; Virology; Pediatrics; Biology; Viral disease; Environmental health; Internal medicine; Microbiology; Geography","retraction":null,"screen_n_in":null,"score":{"opus":0.04063810224505317,"gpt":0.2876824613874181,"spread":0.2470443591423649,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001518567,0.0002692769,0.0004731049,0.0001148328,0.0003143322,0.00004337795,0.00006288086,0.0001682274,0.0003176018],"category_scores_gemma":[0.0005001372,0.0002258416,0.0001531541,0.0003233929,0.00009890625,0.0001664151,0.0001023663,0.0003514553,0.0001181507],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001118509,"about_ca_system_score_gemma":0.00003983835,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008813626,"about_ca_topic_score_gemma":0.0001269604,"domain_scores_codex":[0.9984693,0.00006955826,0.0004571342,0.0004068778,0.0002255409,0.0003715681],"domain_scores_gemma":[0.9991865,0.00006367028,0.0001888776,0.0002577835,0.0001213768,0.0001817467],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001335617,0.00008833958,0.9884149,0.00006368879,0.00009048239,0.00145209,0.0006931839,0.0002165242,0.002118455,0.0001423176,0.005881382,0.000705021],"study_design_scores_gemma":[0.0008765804,0.000725663,0.9945462,0.00006322129,0.0002095987,0.000765643,0.0002618863,0.0008678755,0.0006936663,0.000067102,0.0006765427,0.0002460743],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872879,0.00009983444,0.001027608,0.001588247,0.0002012957,0.0006362756,0.00005183406,0.0005240173,0.008582977],"genre_scores_gemma":[0.9973056,0.00003223512,0.0006252783,0.0004784813,0.0002207151,0.00006692587,0.0003095247,0.00003411804,0.0009271059],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0100177,"threshold_uncertainty_score":0.9209555,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1985450349","doi":"10.1007/s11046-007-9037-4","title":"The role of fungal proteinases in pathophysiology of Stachybotrys chartarum","year":2007,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Essential Oils and Antimicrobial Activity","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Saint Mary's University; St. Mary's University","funders":"National Institute of Environmental Health Sciences","keywords":"Microbial ecology; Medical microbiology; Microbiology; Pathophysiology; Biology; Bacteria; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.004300667625652471,"gpt":0.1928061144489647,"spread":0.1885054468233122,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005721775,0.00008609863,0.0001940462,0.00001020592,0.00007809887,0.000006379414,0.0002010302,0.00008037503,0.00002513764],"category_scores_gemma":[0.0000838692,0.00002792716,0.00007070311,0.0002183592,0.000163436,0.00004489418,0.00008043968,0.0001109482,0.000003571732],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006542219,"about_ca_system_score_gemma":0.000005957816,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003603247,"about_ca_topic_score_gemma":0.0007287604,"domain_scores_codex":[0.9991428,0.00009046701,0.0002676074,0.0001560806,0.00008856039,0.0002544776],"domain_scores_gemma":[0.9994592,0.0002488756,0.0001624924,0.00005709199,0.00004769608,0.00002463734],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008134008,0.0001138715,0.03526491,0.00000531972,0.000001373616,0.00001015467,0.00002834594,9.828454e-7,0.8893626,0.0004547148,0.000006729315,0.07466962],"study_design_scores_gemma":[0.00005152927,0.0002425827,0.4176697,0.00001292665,0.000001943672,0.00000311054,0.0001467026,0.000003756821,0.5798013,0.001612676,0.0003989719,0.00005480576],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987805,0.0003432564,0.000002160276,0.0001047048,0.00006457644,0.0001543027,0.00003227718,0.00001202891,0.0005061341],"genre_scores_gemma":[0.9997526,0.00007186517,0.00005045222,0.00002544365,0.00006061031,0.000004443884,0.00000618228,5.815381e-7,0.00002779667],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3824048,"threshold_uncertainty_score":0.1138837,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2903111832","doi":"10.1007/s11046-018-0306-1","title":"Eighty Years of Mycopathologia: A Retrospective Analysis of Progress Made in Understanding Human and Animal Fungal Pathogens","year":2018,"lang":"en","type":"editorial","venue":"Mycopathologia","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Medical microbiology; Microbial ecology; Biology; Ecology; Microbiology","retraction":null,"screen_n_in":null,"score":{"opus":0.01375186018101884,"gpt":0.2669776757669791,"spread":0.2532258155859602,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007967291,0.0004345619,0.001192102,0.0006162777,0.00007320534,0.00002653666,0.0003826806,0.001256623,0.00002053534],"category_scores_gemma":[0.0006627155,0.0004380589,0.0003591193,0.0006679959,0.0007282337,0.000008273988,0.0003960623,0.0004081631,0.000001237992],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001065348,"about_ca_system_score_gemma":0.0001654439,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002432447,"about_ca_topic_score_gemma":0.0001359416,"domain_scores_codex":[0.9970171,0.0002843094,0.0007232019,0.001034847,0.0004699352,0.0004705956],"domain_scores_gemma":[0.9982743,0.00009261185,0.0006776064,0.0006133023,0.0002350717,0.00010714],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005093814,0.0002662289,0.4042526,0.0001914494,0.0004936814,0.0005125797,0.0001364588,0.000003269455,0.5688321,0.0001191239,0.02460996,0.00007315102],"study_design_scores_gemma":[0.001078826,0.002866836,0.9875882,0.0002341838,0.002045567,0.00002548594,0.0002862587,0.00003432526,0.003600206,0.0002139319,0.001217957,0.0008082018],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9667087,0.002147129,0.00006911868,0.000002528014,0.01781364,0.0003334697,0.01265013,0.00002004202,0.0002553073],"genre_scores_gemma":[0.9747989,0.0005850091,0.0004023688,0.000007014556,0.02159727,0.00003495119,0.002481143,0.00004831279,0.00004506395],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5833356,"threshold_uncertainty_score":0.9998071,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2118632689","doi":"10.1007/s11046-010-9287-4","title":"Chlorella Infection in a Sheep in Mexico and Minireview of Published Reports from Humans and Domestic Animals","year":2010,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Prince Edward Island","funders":"Universidad de León; Universidad Autónoma de Nuevo León","keywords":"Chlorella; Medical microbiology; Biology; Microbial ecology; Microbiology; Ecology; Algae; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.01580895056032424,"gpt":0.2898170297900285,"spread":0.2740080792297043,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008686608,0.000470516,0.002086575,0.0004668148,0.00004666796,0.00004053521,0.0001619848,0.0009767775,0.0002315117],"category_scores_gemma":[0.0004785884,0.0003633648,0.0001779336,0.0003587287,0.0002959907,0.00009713722,0.0003041012,0.0008077459,0.00002944409],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000386408,"about_ca_system_score_gemma":0.00006550633,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002494005,"about_ca_topic_score_gemma":0.0004096186,"domain_scores_codex":[0.9972701,0.0004079994,0.001132534,0.0008302527,0.00003207125,0.0003270419],"domain_scores_gemma":[0.9985772,0.0001660886,0.0007101801,0.0004828624,0.00003585692,0.00002785964],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007930851,0.0005806618,0.08349339,0.02175048,0.0002947121,0.001756724,0.0008269947,1.519875e-7,0.006567292,0.0005677073,0.002438356,0.8816442],"study_design_scores_gemma":[0.0007950237,0.0001282724,0.04669099,0.01000205,0.0009869233,0.0005593848,0.0000289718,8.704963e-8,0.00003957219,0.0003975134,0.9397503,0.000620921],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.07349378,0.9245293,0.00000219904,0.00001367418,0.0003809962,0.001046325,0.00007430531,0.00003223839,0.0004271929],"genre_scores_gemma":[0.01637311,0.9824519,0.00004950082,0.00002997245,0.00002135281,0.00011561,0.0007398746,0.00002925811,0.0001893935],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9373119,"threshold_uncertainty_score":0.9998818,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W847486016","doi":"10.1007/s11046-015-9909-y","title":"Cutaneous Phaeohyphomycosis Caused by Exophiala attenuata in a Domestic Cat","year":2015,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Phaeohyphomycosis; Biology; Itraconazole; Chromoblastomycosis; Pathology; Conidium; Panniculitis; Sporotrichosis; Hypha; Mycosis; Microbiology; Botany; Medicine; Antifungal; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.03466017611165403,"gpt":0.3002245133390385,"spread":0.2655643372273845,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002549243,0.0001826471,0.0004029975,0.0001417175,0.0000618729,0.00001637432,0.00007860207,0.0001158535,0.00005142709],"category_scores_gemma":[0.0006747603,0.0001470939,0.00005804846,0.0003717279,0.0001132042,0.00004812307,0.00008191448,0.0001924681,0.000256862],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002076156,"about_ca_system_score_gemma":0.00008985335,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002767127,"about_ca_topic_score_gemma":0.00007113569,"domain_scores_codex":[0.998888,0.00006480323,0.0002623215,0.0002697352,0.0001875245,0.000327585],"domain_scores_gemma":[0.9992713,0.00009921718,0.00005206497,0.0003218958,0.0001018001,0.0001537041],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003463829,0.000954867,0.7785632,0.0001077308,0.00006395686,0.01199409,0.002695599,0.00003462972,0.06157954,0.00009043435,0.140642,0.002927602],"study_design_scores_gemma":[0.03276466,0.01378756,0.7320305,0.001236739,0.001407323,0.06920917,0.009598832,0.002263866,0.01343949,0.002624394,0.1178011,0.003836397],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913828,0.001076828,0.00004609782,0.0007775545,0.00037727,0.0003025356,0.00003308066,0.0001309818,0.005872864],"genre_scores_gemma":[0.9967545,0.0001492476,0.0003752889,0.0005020538,0.00009506126,0.00007069808,0.00003241913,0.00002126253,0.001999452],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05721509,"threshold_uncertainty_score":0.5998315,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2958392080","doi":"10.1007/s11046-019-00361-8","title":"Contemporary Gene Flow is a Major Force Shaping the Aspergillus fumigatus Population in Auckland, New Zealand","year":2019,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Aspergillus fumigatus; Gene flow; Biology; Population; Aspergillosis; Gene; Genetics; Evolutionary biology; Genetic variation; Microbiology; Immunology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02813158954264845,"gpt":0.2734439825776012,"spread":0.2453123930349527,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000506882,0.0001686298,0.0003628627,0.00006988759,0.00006085015,0.00002379621,0.0001221778,0.0001580055,0.0003030905],"category_scores_gemma":[0.0001469826,0.0001088955,0.0001065495,0.0002156481,0.00004198501,0.0001056756,0.00005431507,0.0002953821,0.000206601],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009535305,"about_ca_system_score_gemma":0.000122838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006672874,"about_ca_topic_score_gemma":0.0001720126,"domain_scores_codex":[0.9986641,0.00008036604,0.0003384866,0.0003831686,0.0002389464,0.0002948649],"domain_scores_gemma":[0.9992026,0.00007484798,0.00008667532,0.0005042439,0.00004116913,0.00009042842],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004916544,0.00003290559,0.9758859,0.00004020253,0.000009329584,0.0001101532,0.0005446146,0.00001036438,0.01614819,0.00002128371,0.005097027,0.001608344],"study_design_scores_gemma":[0.001727999,0.0001918526,0.9944212,0.0001168745,0.00002006531,0.00005086097,0.0001656316,0.0007578326,0.001059202,0.0003517229,0.0009998768,0.0001369205],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933208,0.00128725,0.000100037,0.001243639,0.0001961668,0.0006451928,0.00002008589,0.00005462654,0.003132232],"genre_scores_gemma":[0.9836817,0.00004022603,0.0005750243,0.001656148,0.0001281467,0.000009543009,0.00009208606,0.00001831318,0.01379879],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01853523,"threshold_uncertainty_score":0.444063,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2905094514","doi":"10.1007/s11046-018-0310-5","title":"Molecular Identification and Antifungal Susceptibility of Clinical Isolates of Sporothrix schenckii Complex in Medellin, Colombia","year":2018,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Universidad Nacional Autónoma de México; Fundación para la promoción de la investigación y la tecnología; Craft Ontario","keywords":"Sporotrichosis; Itraconazole; Sporothrix schenckii; Sporothrix; Biology; Microbiology; Medical microbiology; Antifungal drug; Species complex; Phylogenetic tree; Antifungal; Genetics; Gene; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.06302350624201485,"gpt":0.3829930678876135,"spread":0.3199695616455986,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00126941,0.00009634841,0.0005090741,0.00009796939,0.00004023362,0.000004363911,0.00005360462,0.0001231862,0.00007640724],"category_scores_gemma":[0.0007516518,0.00008174976,0.0000754003,0.0002437882,0.0007768864,0.00003834149,0.00006360516,0.000150779,0.000008023588],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001245635,"about_ca_system_score_gemma":0.00003649199,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001145664,"about_ca_topic_score_gemma":0.00009329428,"domain_scores_codex":[0.9985796,0.0001232455,0.0007895136,0.0002752796,0.0001024362,0.0001299836],"domain_scores_gemma":[0.9990239,0.0001194558,0.000219766,0.000289355,0.0003065452,0.00004101267],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001643932,0.0002514031,0.7137998,0.00007644747,0.00001362691,0.000009015491,0.0001231718,0.000001025615,0.284418,0.0001915332,0.0001198407,0.0008317882],"study_design_scores_gemma":[0.0006933676,0.000984884,0.9639571,0.00006019485,0.00004122259,0.00001793728,0.0001534521,0.0004909154,0.03323492,0.0002482646,0.0000540136,0.00006369617],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980117,0.000389834,0.0002822139,0.00008740611,0.0001359981,0.0002921163,0.00001542104,0.00001940357,0.0007658899],"genre_scores_gemma":[0.9980417,0.0001716256,0.001647254,0.00004149102,0.00003465047,0.000006128714,0.000009970084,0.000006818358,0.00004038442],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.251183,"threshold_uncertainty_score":0.3333659,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4396834740","doi":"10.1007/s11046-024-00856-z","title":"Mapping the Global Spread of T. indotineae: An Update on Antifungal Resistance, Mutations, and Strategies for Effective Management","year":2024,"lang":"en","type":"review","venue":"Mycopathologia","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mediprobe Research (Canada)","funders":"","keywords":"Itraconazole; Fluconazole; Medicine; Posaconazole; Drug resistance; Systematic review; Intensive care medicine; MEDLINE; Antifungal; Biology; Dermatology; Microbiology","retraction":null,"screen_n_in":null,"score":{"opus":0.03765485714603286,"gpt":0.3646091018154617,"spread":0.3269542446694289,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002247566,0.0003225855,0.0008553283,0.0001214851,0.00008379702,0.00006151648,0.000108988,0.0001173799,0.000005179786],"category_scores_gemma":[0.00003060092,0.0001777127,0.0002548606,0.0003090358,0.0001099295,0.00004600206,0.00006776146,0.0001453368,0.00001949397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001071125,"about_ca_system_score_gemma":0.0000992211,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003603204,"about_ca_topic_score_gemma":0.000004422945,"domain_scores_codex":[0.9987189,0.0001277442,0.0003418952,0.0004548141,0.0001595043,0.0001971177],"domain_scores_gemma":[0.9992409,0.0001016519,0.0001865622,0.0003631196,0.00004825001,0.00005949296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002778186,0.0003288511,0.0005266958,0.07174679,0.001103833,0.00102837,0.00007603274,6.443743e-7,5.175421e-7,0.02785001,0.001547852,0.8955126],"study_design_scores_gemma":[0.004082133,0.002518318,0.02788295,0.07965035,0.02883741,0.0003789503,0.001665747,0.00001594364,0.000003729938,0.01785344,0.8361609,0.0009501089],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001692777,0.9901181,0.00008238191,0.00002812858,0.0001857739,0.003502421,0.001231165,0.00005932045,0.003099944],"genre_scores_gemma":[0.008207962,0.9888542,0.0008982355,0.00005234215,0.00008366231,0.000869045,0.0006540911,0.00003530571,0.0003452136],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8945625,"threshold_uncertainty_score":0.7246912,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2034332824","doi":"10.1007/s11046-009-9226-4","title":"Characterization of a 52 kDa Exoantigen of Penicillium chrysogenum and Monoclonal Antibodies Suitable for its Detection","year":2009,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; National Academy of Sciences","keywords":"Penicillium chrysogenum; Biology; Clade; Aspergillus niger; Medical microbiology; Aspergillus; Monoclonal antibody; Microbiology; Antibody; Biochemistry; Gene; Phylogenetics; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.012623857201916,"gpt":0.2312330063159679,"spread":0.2186091491140519,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003519613,0.00009117891,0.0001828636,0.00002988124,0.00007942327,0.000007670901,0.00008391515,0.00009398645,0.00006864453],"category_scores_gemma":[0.00005961021,0.00008509158,0.00004565021,0.00009829331,0.00008383238,0.0001603332,0.00004203678,0.00005050075,0.000008313452],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002188756,"about_ca_system_score_gemma":0.000006879327,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002736108,"about_ca_topic_score_gemma":0.00002024657,"domain_scores_codex":[0.9992837,0.00004373694,0.0002357397,0.00018315,0.00008946659,0.0001642288],"domain_scores_gemma":[0.9996743,0.00002109502,0.0001524037,0.0001045347,0.00002442913,0.00002324693],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006770587,0.00005010989,0.006404372,0.00003226674,0.000002472268,0.000001059881,0.0004602433,0.00001570105,0.9885118,0.0000707876,0.00002153797,0.004361919],"study_design_scores_gemma":[0.0002210331,0.0003159816,0.2303561,0.00001198129,0.00001183715,0.00001285807,0.00003262905,0.0001218593,0.7683991,0.0001095809,0.0003261392,0.00008092388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964103,0.00005245206,0.002708668,0.00005021726,0.00007742334,0.0002886276,0.00008257313,0.00001639176,0.0003133855],"genre_scores_gemma":[0.9987816,0.0000480457,0.0007605887,0.00007545349,0.00002168958,0.000005653834,0.00002654321,0.000005053775,0.0002753887],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2239517,"threshold_uncertainty_score":0.3469934,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2052010765","doi":"10.1007/s11046-009-9222-8","title":"Using Human Sera to Identify a 52-kDa Exoantigen of Penicillium chrysogenum and Implications of Polyphasic Taxonomy of Anamorphic Ascomycetes in the Study of Antigenic Proteins","year":2009,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Penicillium chrysogenum; Biology; Clade; Fungus; Penicillium; Microbiology; Medical microbiology; Strain (injury); Antigen; Botany; Phylogenetics; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.06164459400552013,"gpt":0.3240411647644306,"spread":0.2623965707589104,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009034199,0.000132253,0.0003616099,0.0001070331,0.00008748371,0.000007955654,0.0004244245,0.00006835409,0.000048806],"category_scores_gemma":[0.00004327247,0.0001077843,0.00006390693,0.0005312102,0.0002127223,0.0001010638,0.0001451286,0.000113504,0.000002009852],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003095616,"about_ca_system_score_gemma":0.00002082331,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001926452,"about_ca_topic_score_gemma":0.0006874885,"domain_scores_codex":[0.998491,0.0002490009,0.0006114607,0.0002621234,0.000185762,0.000200636],"domain_scores_gemma":[0.9990859,0.00003457206,0.0003484364,0.0004736769,0.0000284108,0.00002897521],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001624677,0.0004776089,0.2656484,0.00002337216,0.000005357187,0.000002654843,0.00318147,0.0001154522,0.7298796,0.00007886626,0.00001247451,0.0005585044],"study_design_scores_gemma":[0.0004121651,0.0008451472,0.9111778,0.00003849227,0.00002938538,0.00001528167,0.001462939,0.000005938748,0.08573315,0.000165668,0.00001520443,0.0000988008],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978402,0.00007845086,0.0001703602,0.00006825299,0.0000154752,0.00153844,0.0000379834,0.000005792683,0.0002450858],"genre_scores_gemma":[0.9988083,0.00000419876,0.00107878,0.00005654254,0.0000076263,0.00002520022,0.000003349087,0.000005865375,0.00001017368],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6455294,"threshold_uncertainty_score":0.4395316,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1990118478","doi":"10.1007/s11046-014-9808-7","title":"The MAT1-1:MAT1-2 Ratio of Sporothrix globosa Isolates in Japan","year":2014,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Nihon University","keywords":"Heterothallic; Mating type; Biology; Sporothrix schenckii; Phylogenetic tree; Locus (genetics); Sporothrix; Mycology; Fungus; Genetics; Microbiology; Gene; Botany; Sporotrichosis","retraction":null,"screen_n_in":null,"score":{"opus":0.00933409460730748,"gpt":0.2560508338606258,"spread":0.2467167392533184,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005346225,0.0001037454,0.0002642361,0.00004296613,0.0001204886,0.00001208564,0.00006731989,0.000065195,0.00003186491],"category_scores_gemma":[0.0004574929,0.00006208876,0.00006194576,0.0002006467,0.0001408188,0.0000308626,0.0000476908,0.0001555224,0.00005328597],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002706969,"about_ca_system_score_gemma":0.00001577121,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001034567,"about_ca_topic_score_gemma":0.0001163559,"domain_scores_codex":[0.9992492,0.00006456169,0.000264933,0.0001465475,0.00008364356,0.0001910671],"domain_scores_gemma":[0.9993727,0.0001894801,0.0000736723,0.0002701514,0.00006700534,0.00002702296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001675391,0.0002077068,0.9259,0.0001034021,0.00003119104,0.00002230372,0.0009628561,0.00004027893,0.047707,0.007516637,0.002973876,0.01436715],"study_design_scores_gemma":[0.000822563,0.0008122413,0.9841596,0.00009976089,0.00003358054,0.0001113508,0.0005622544,0.0007098159,0.005512991,0.0007292089,0.006322302,0.0001243459],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9860782,0.000706379,0.0002059894,0.0006615181,0.0002124155,0.000213272,0.000002955908,0.00004795046,0.01187134],"genre_scores_gemma":[0.9986281,0.0001781031,0.0003338218,0.0001540737,0.00006851961,0.00002801283,0.000002700689,0.000008732138,0.0005979671],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05825952,"threshold_uncertainty_score":0.2531906,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2089306581","doi":"10.1007/s11046-007-9080-1","title":"Immunohistochemical and immunocytochemical detection of SchS34 antigen in Stachybotrys chartarum spores and spore impacted mouse lungs","year":2007,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Indoor Air Quality and Microbial Exposure","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University; Saint Mary's University","funders":"Dalhousie University","keywords":"Spore; Antigen; Biology; Microbiology; Immunohistochemistry; Cytoplasm; Pathology; Cell biology; Immunology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.004958879302604126,"gpt":0.2255097538957556,"spread":0.2205508745931515,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007938218,0.0001655777,0.0002530433,0.00006794753,0.00006960227,0.00001296407,0.0001254166,0.0002279568,0.00008155774],"category_scores_gemma":[0.0001037971,0.0001561523,0.00003724483,0.0001912456,0.0004902554,0.0001474364,0.0001921444,0.0002897772,0.00001155305],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001201977,"about_ca_system_score_gemma":0.000008506163,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005893297,"about_ca_topic_score_gemma":0.00007858632,"domain_scores_codex":[0.9987738,0.00004604802,0.0003763259,0.0003189295,0.0001394653,0.0003454418],"domain_scores_gemma":[0.9995516,0.00004284052,0.0001167314,0.0002031462,0.00001070259,0.00007500477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002499885,0.00005855622,0.08184046,0.00001745594,0.000002972338,0.0000417816,0.0007512271,0.000001645904,0.9143521,0.00001215756,0.00002921973,0.002642408],"study_design_scores_gemma":[0.0004861229,0.0001071823,0.3532867,0.00001593752,0.000005548297,0.0001234633,0.0001785867,0.00001825207,0.6454338,0.00005954162,0.0001360468,0.0001487889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998797,0.000309383,0.0001919561,0.00002648416,0.00004266129,0.0002244387,0.00001766446,0.00003463497,0.0003557563],"genre_scores_gemma":[0.9990245,0.00007755127,0.0007123358,0.00006625368,0.00001561273,0.000003342369,0.00001825445,0.00001232487,0.00006985911],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2714463,"threshold_uncertainty_score":0.6367705,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1997019081","doi":"10.1007/s11046-014-9747-3","title":"Prevalent Drug Resistance Among Oral Yeasts from Asymptomatic Patients in Hainan, China","year":2014,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Fluconazole; Itraconazole; Medical microbiology; Drug resistance; Ketoconazole; Biology; Microbiology; Amphotericin B; Asymptomatic; Drug; Antifungal drug; Antifungal drugs; Parasitology; Antifungal; Medicine; Pharmacology; Internal medicine; Zoology","retraction":null,"screen_n_in":null,"score":{"opus":0.006678173636672587,"gpt":0.2401860108999622,"spread":0.2335078372632896,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006859986,0.0002202567,0.0004937717,0.00008379763,0.00006687731,0.00002095403,0.0001727889,0.0001242305,0.0001290431],"category_scores_gemma":[0.000929188,0.0001802887,0.0001024597,0.0002064815,0.0001551168,0.0001157752,0.00007358569,0.0002938829,0.0001420515],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001536413,"about_ca_system_score_gemma":0.00003946598,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000166988,"about_ca_topic_score_gemma":0.001236748,"domain_scores_codex":[0.9979995,0.0002664387,0.000447288,0.0005280717,0.0003713864,0.0003873266],"domain_scores_gemma":[0.9989378,0.00009669118,0.0001318188,0.0006512898,0.00007556762,0.0001068147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00022653,0.0002871893,0.9946681,0.0001301569,0.000006014369,0.00005328277,0.0004380914,0.000001585712,0.0003207592,0.00006014409,0.001888747,0.001919373],"study_design_scores_gemma":[0.001463867,0.0001007632,0.9962782,0.0004240763,0.00003353543,8.007397e-7,0.00004216812,0.0001556919,0.0002894047,0.0006453074,0.000387906,0.0001783335],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931149,0.0002190487,0.0002344995,0.0001531937,0.0001961039,0.0004960923,0.00001885305,0.0001000448,0.005467291],"genre_scores_gemma":[0.9939204,0.00002577907,0.00154099,0.0002367889,0.00005719236,0.00003105008,0.00006409579,0.00002350662,0.004100161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001741039,"threshold_uncertainty_score":0.7351961,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2070868874","doi":"10.1007/s11046-013-9703-7","title":"Patterns of Human Oral Yeast Species Distribution on Hainan Island in China","year":2013,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"National Natural Science Foundation of China","keywords":"Yeast; Biology; Candida tropicalis; Microbiology; Medical microbiology; Candida parapsilosis; Candida albicans; Candida glabrata; Virulence; Corpus albicans; Zoology; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.008838693851949487,"gpt":0.2329275988964411,"spread":0.2240889050444916,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009532829,0.0001119447,0.0001492558,0.00002682793,0.00004906287,0.00001082032,0.0001004642,0.00008501442,0.0001056518],"category_scores_gemma":[0.00003863897,0.00008519732,0.00004753479,0.00004494671,0.00004871921,0.000002440207,0.00009009473,0.00007073201,0.00002246726],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001118794,"about_ca_system_score_gemma":0.00000681548,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001415131,"about_ca_topic_score_gemma":0.0001682404,"domain_scores_codex":[0.9993549,0.00004092548,0.0001563015,0.0002011099,0.00006901227,0.0001777609],"domain_scores_gemma":[0.9996948,0.00000298432,0.00005812577,0.0001897456,0.00003194404,0.00002245146],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002456504,0.0001373182,0.5893612,0.00002239999,0.00001001192,0.00001144802,0.0000929063,0.00001369472,0.40392,0.0004928972,0.004906262,0.00100726],"study_design_scores_gemma":[0.0002974794,0.0004442474,0.9622653,0.0000241468,0.000004049704,0.000004934555,0.0001032027,0.000004506079,0.03552068,0.00006836814,0.00115327,0.0001097812],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971888,0.0001052744,0.0001415017,0.00007428925,0.00007777645,0.0001352332,0.0001475791,0.000006744487,0.002122805],"genre_scores_gemma":[0.9982967,0.00005549176,0.00002127942,0.00003585071,0.00007683129,0.000019083,0.0002722139,0.000007695801,0.001214859],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3729041,"threshold_uncertainty_score":0.3474246,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2935944639","doi":"10.1007/s11046-019-00328-9","title":"Genotypic and Phenotypic Analyses of Two “Isogenic” Strains of the Human Fungal Pathogen Cryptococcus neoformans var. neoformans","year":2019,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Cryptococcus neoformans; Biology; Cryptococcosis; Medical microbiology; Genotype; Fungal pathogen; Phenotype; Mycology; Microbiology; Pathogen; Human pathogen; Cryptococcus; Fungi imperfecti; Microbial ecology; Genetics; Gene; Botany; Bacteria","retraction":null,"screen_n_in":null,"score":{"opus":0.03418776151006307,"gpt":0.3242052862508875,"spread":0.2900175247408244,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003208634,0.0002077004,0.0005355133,0.0001294223,0.0001834038,0.000009341648,0.0001464192,0.0001012537,0.0002034669],"category_scores_gemma":[0.00005397162,0.0001306409,0.0002082986,0.0003179848,0.0002678699,0.00007623521,0.0001888907,0.00024595,0.00002254517],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003384599,"about_ca_system_score_gemma":0.00005776013,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009671388,"about_ca_topic_score_gemma":0.00004063404,"domain_scores_codex":[0.9986832,0.00007559455,0.0004679057,0.0002502798,0.0002126646,0.0003103128],"domain_scores_gemma":[0.9989883,0.0000496148,0.000227708,0.0005246776,0.0001508746,0.00005886731],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003051466,0.0001075145,0.4300118,0.0001523588,0.00009098475,0.000007696008,0.000629451,0.00005927911,0.5669299,0.001257136,0.00008840569,0.0006349153],"study_design_scores_gemma":[0.0013455,0.0007275644,0.9707742,0.00008482169,0.0003327263,0.00009243553,0.0004767303,0.0001166532,0.02535502,0.0003666325,0.0001761377,0.0001516049],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9887531,0.0007259162,0.0001082737,0.00005054798,0.0001868034,0.0006025322,0.00007821259,0.00003716115,0.009457421],"genre_scores_gemma":[0.9986053,0.00006813583,0.0004554959,0.0001064133,0.00006394214,0.00001999571,0.00001280622,0.00001758579,0.0006503878],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5415749,"threshold_uncertainty_score":0.5327383,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2091586814","doi":"10.1007/s11046-007-9028-5","title":"Oral yeast flora and its ITS sequence diversity among a large cohort of medical students in Hainan, China","year":2007,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"College of Science and Engineering, University of Minnesota; National Science Foundation","keywords":"Flora (microbiology); Biology; Carriage; Yeast; Candida albicans; Population; Medical microbiology; Candida tropicalis; Corpus albicans; Microbiology; Oral microbiology; Commensalism; Mainland China; Ribosomal RNA; Internal transcribed spacer; Clade; Zoology; China; Phylogenetics; Gene; Genetics; Bacteria; Demography; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.02408248985498484,"gpt":0.3309174644384472,"spread":0.3068349745834623,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003890333,0.0001362796,0.0004139814,0.00009575063,0.00008834204,0.000008487091,0.0002709613,0.0002226307,0.0001310683],"category_scores_gemma":[0.0009649705,0.0001135551,0.00005187754,0.0002498583,0.0001686612,0.0001027849,0.0005865829,0.0003591488,0.00001502486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008185423,"about_ca_system_score_gemma":0.0000645802,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001141882,"about_ca_topic_score_gemma":0.0006103296,"domain_scores_codex":[0.997892,0.00008126427,0.0003150329,0.0003556451,0.0009933236,0.0003627093],"domain_scores_gemma":[0.999382,0.00004011836,0.00008021083,0.0002150041,0.00008995389,0.0001927265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002476063,0.0002852161,0.9940335,0.0001165022,0.00001038742,0.002016199,0.0005152095,1.381586e-7,0.00223642,0.0001731874,0.00005931293,0.0003063112],"study_design_scores_gemma":[0.001214394,0.0001730444,0.9969542,0.0001803701,0.00003132194,0.00003697265,0.0002705751,0.00009899568,0.0008986101,0.00002215268,0.00002157956,0.00009779798],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982209,0.0004400602,0.0001397203,0.00008256295,0.00008870171,0.0003767643,0.0000228992,0.00003152846,0.0005968933],"genre_scores_gemma":[0.999266,0.0001582004,0.00006862417,0.0001536508,0.0000272234,0.000002810468,0.00001057812,0.000007245664,0.0003056529],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002925363,"threshold_uncertainty_score":0.4630643,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2570560271","doi":"10.1007/s11046-016-0101-9","title":"Cryptococcosis in Patients with Nephrotic Syndrome: A Pooled Analysis of Cases","year":2017,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"National Key Research and Development Program of China; Science and Technology Commission of Shanghai Municipality; National Natural Science Foundation of China","keywords":"Cryptococcosis; Medicine; Epidemiology; Nephrotic syndrome; Medical microbiology; Internal medicine; Mycosis; Itraconazole; Mortality rate; Pediatrics; Immunology; Antifungal; Dermatology","retraction":null,"screen_n_in":null,"score":{"opus":0.01544012112646035,"gpt":0.2729484962593537,"spread":0.2575083751328934,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001174492,0.0001044656,0.000496163,0.0003213067,0.0001313479,0.00001560132,0.00007330564,0.00004985049,0.00007423848],"category_scores_gemma":[0.00035854,0.00007099838,0.00009137803,0.0003466406,0.0001361669,0.00006142718,0.00005777499,0.00009413053,0.000007748494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003722768,"about_ca_system_score_gemma":0.00001871015,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002538491,"about_ca_topic_score_gemma":0.0001733218,"domain_scores_codex":[0.9993236,0.00002508926,0.0001932513,0.0001810917,0.0001277548,0.0001492142],"domain_scores_gemma":[0.9991714,0.00005121768,0.0001423122,0.0004769908,0.0001231548,0.00003496508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001303842,0.0002982506,0.9981677,0.00002773599,0.0003898391,0.0003894172,0.00006423208,0.00002415034,0.0001151201,0.00001990298,0.00005608893,0.0003171924],"study_design_scores_gemma":[0.001111451,0.0009490206,0.9960542,0.0000743218,0.001543042,0.00002853107,0.00003854119,0.0000468346,0.00005860055,0.000006699091,0.00001319518,0.00007555325],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983089,0.00007305555,0.00002019487,0.00005985599,0.00003743848,0.0002969407,0.00002237313,0.0000182373,0.001162988],"genre_scores_gemma":[0.99942,0.00001246594,0.0003693003,0.00005119424,0.000005457818,0.00003941482,0.00001266796,0.000006811476,0.00008267156],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002113476,"threshold_uncertainty_score":0.289523,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4220902852","doi":"10.1007/s11046-022-00616-x","title":"Genotyping and Drug Resistance Profile of Clinical Isolates of Candida albicans from Vulvovaginal Candidiasis in the Eastern China","year":2022,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Anidulafungin; Micafungin; Fluconazole; Voriconazole; Caspofungin; Microbiology; Itraconazole; Posaconazole; Biology; Drug resistance; Echinocandin; Candida dubliniensis; Candida albicans; Amphotericin B; Genotype; Corpus albicans; Antifungal","retraction":null,"screen_n_in":null,"score":{"opus":0.02507947941709054,"gpt":0.3141324443976913,"spread":0.2890529649806008,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001671641,0.0001166495,0.0005150658,0.00005729643,0.00009152837,0.000006477016,0.0001872032,0.00005025898,0.0002070954],"category_scores_gemma":[0.0003672449,0.00008304775,0.00008445654,0.000238268,0.000262553,0.00004218101,0.0001106429,0.0004321253,0.000001415074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003406513,"about_ca_system_score_gemma":0.0001588888,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001802608,"about_ca_topic_score_gemma":0.001624919,"domain_scores_codex":[0.9982595,0.000350276,0.0006083596,0.0003287457,0.0002589939,0.0001941394],"domain_scores_gemma":[0.9989343,0.0003319733,0.00023443,0.0004112469,0.00004321037,0.00004483239],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001085204,0.0001703239,0.9903229,0.00009308053,0.00001525383,0.00009225974,0.003158389,0.000001563816,0.00304311,0.00007922166,0.0004045069,0.001534157],"study_design_scores_gemma":[0.0008126657,0.0002064627,0.994839,0.00008224812,0.00005300187,0.00001022442,0.002886774,0.00009561235,0.000294683,0.0002746053,0.0003652495,0.00007952093],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949617,0.002326175,0.00003586543,0.0005767399,0.00008090714,0.0003292184,0.0001377919,0.00001071836,0.001540929],"genre_scores_gemma":[0.9983801,0.0001089562,0.0007211571,0.0001890102,0.00003867308,0.00002843671,0.00002662493,0.00000924399,0.0004978308],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004516024,"threshold_uncertainty_score":0.3386589,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1995508638","doi":"10.1007/s11046-013-9614-7","title":"Detection of Cryptococcus gattii in Selected Urban Parks of the Willamette Valley, Oregon","year":2013,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"National Institutes of Health","keywords":"Cryptococcus gattii; Wildlife; Veterinary medicine; National park; Geography; Cryptococcosis; Biology; Ecology; Medicine","retraction":null,"screen_n_in":null,"score":{"opus":0.008167891340110903,"gpt":0.2257184655958635,"spread":0.2175505742557526,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001716969,0.0001015099,0.0002872203,0.0001043571,0.00004763729,0.000003614201,0.00006242905,0.00009611207,0.00007504505],"category_scores_gemma":[0.0004212978,0.00006212335,0.00007659275,0.0006154199,0.0001318449,0.0000368217,0.00005250494,0.0002040033,0.00001302142],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004147177,"about_ca_system_score_gemma":0.00002850573,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002814272,"about_ca_topic_score_gemma":0.00007077273,"domain_scores_codex":[0.9991926,0.000093519,0.0002941161,0.0001469924,0.0001163855,0.0001563822],"domain_scores_gemma":[0.9992939,0.00007296897,0.0001259482,0.0002575225,0.0002271527,0.00002249641],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003111585,0.0001019475,0.4976572,0.00005327907,0.00001600698,0.000003040453,0.0002484179,0.00001066484,0.4994556,0.00003236763,0.0008444852,0.001545868],"study_design_scores_gemma":[0.0004588896,0.0003743208,0.9124819,0.0000761808,0.00002949929,0.00002559782,0.0001007793,0.0001133922,0.08603207,0.00009456179,0.000157041,0.00005576328],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969977,0.0002776948,0.00008788231,0.0001615637,0.000163464,0.0005710445,0.000002371306,0.00002988263,0.001708379],"genre_scores_gemma":[0.9993781,0.00003825794,0.0001905923,0.00006373023,0.00003349116,0.00008325261,0.000001267923,0.000008775351,0.0002024921],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4148247,"threshold_uncertainty_score":0.2533317,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4246327363","doi":"10.1007/s11046-015-9948-4","title":"Coccidioidomycosis in Biopsies with Presumptive Diagnosis of Malignancy in Dogs: Report of Three Cases and Comparative Discussion of Published Reports","year":2015,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Prince Edward Island","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Medicine; Coccidioides; Pathology; Medical microbiology; Dermatology; Malignancy; Coccidioides immitis; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.06663596964811393,"gpt":0.3106028373583445,"spread":0.2439668677102306,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000658609,0.0001386986,0.0007842273,0.0002713316,0.00001695415,0.000004547564,0.00003159533,0.00007439182,0.000009451851],"category_scores_gemma":[0.001419578,0.00007630955,0.00004102228,0.0004606238,0.0003263884,0.000132121,0.0000831458,0.0001145253,1.379517e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003917375,"about_ca_system_score_gemma":0.00008100487,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001447245,"about_ca_topic_score_gemma":0.001342958,"domain_scores_codex":[0.9985693,0.00007093668,0.0007567727,0.0002765713,0.0001941332,0.0001322964],"domain_scores_gemma":[0.9986266,0.0001877411,0.0005217371,0.0002924651,0.0003243097,0.00004708747],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003791381,0.0004332843,0.9920596,0.0001595123,0.00003076564,0.002352418,0.002290135,0.00002070945,0.001788754,0.0000380576,0.0003471347,0.0001004819],"study_design_scores_gemma":[0.0009400668,0.001411064,0.9739059,0.0009504393,0.00006407847,0.001496545,0.002704453,0.00001048115,0.01826254,0.000140885,0.00002392777,0.00008958626],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958656,0.001926092,0.000009552609,0.0001620191,0.00005797801,0.0004690904,0.0000204078,0.00001145721,0.001477828],"genre_scores_gemma":[0.9987107,0.0001668043,0.0009284333,0.000006353582,0.000008066531,0.0001111901,0.00001181099,0.000005780631,0.0000508655],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01815368,"threshold_uncertainty_score":0.3111813,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2766836466","doi":"10.1007/s11046-017-0215-8","title":"Case Series: Report of the First Two Human Indigenous Cases of Cryptococcus gattii Infection in Eastern Canada","year":2017,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Ste. Anne's Hospital; Hôpital du Sacré-Cœur de Montréal; Centre Hospitalier Universitaire de Sherbrooke; Université de Montréal","funders":"","keywords":"Cryptococcus gattii; Outbreak; Geography; Cryptococcosis; Indigenous; East coast; Meningoencephalitis; Ecology; Archaeology; Biology; Virology; Immunology; Physical geography","retraction":null,"screen_n_in":null,"score":{"opus":0.03612801080458623,"gpt":0.3097136789751513,"spread":0.2735856681705651,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002324237,0.0001119378,0.0003128928,0.00005803468,0.0004911264,0.000009869953,0.00007558375,0.00005266625,0.00002075209],"category_scores_gemma":[0.0005085855,0.00007658562,0.00006406628,0.00009231514,0.000203956,0.00005942204,0.0001192259,0.0001587874,8.665249e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001149,"about_ca_system_score_gemma":0.0002044828,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7444974,"about_ca_topic_score_gemma":0.933988,"domain_scores_codex":[0.9991573,0.00003087939,0.0003668411,0.0001614114,0.00012772,0.0001558272],"domain_scores_gemma":[0.9987772,0.00003638207,0.000370112,0.0006495832,0.0001384527,0.00002827907],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002319346,0.00008526376,0.9730548,0.0001043582,0.00001688533,0.02475124,0.0005023274,0.00001674633,0.001075494,0.00001835542,0.0001942514,0.0001570805],"study_design_scores_gemma":[0.000474316,0.0003049873,0.9475075,0.0001387434,0.00004491775,0.04770607,0.0001871697,0.00000319592,0.00305108,0.0000224351,0.0004852988,0.00007429019],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963577,0.0000654967,0.000002589758,0.0001055311,0.0003764401,0.0003853984,0.00001778549,0.00001176506,0.002677341],"genre_scores_gemma":[0.9993869,0.00001423218,0.0000248361,0.00003380112,0.00004987381,0.00003733513,0.00000258096,0.000008371698,0.0004420588],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1894906,"threshold_uncertainty_score":0.3777397,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4291143803","doi":"10.1007/s11046-022-00650-9","title":"Development and Application of Loop-Mediated Isothermal Amplification (LAMP) Assays for Rapid Diagnosis of the Bat White-Nose Disease Fungus Pseudogymnoascus destructans","year":2022,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Bat Biology and Ecology Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"Institut Universitaire de France; Deutsche Forschungsgemeinschaft; Univerzita Karlova v Praze; Technische Universität München; Bat Conservation International","keywords":"Biology; Fungus; Mycelium; Microbiology; Spore; Pathogen; DNA extraction; Pathogenic fungus; Polymerase chain reaction; Botany; Gene; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.01507183748944412,"gpt":0.2061607088926396,"spread":0.1910888714031955,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004429918,0.000110548,0.00018871,0.0000133299,0.0004868273,0.000003940747,0.0002397163,0.00007404706,0.00008545503],"category_scores_gemma":[0.0001719157,0.00004505598,0.00006146052,0.0002078561,0.0002331005,0.00002704473,0.0001995814,0.00009068174,0.000001666452],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000262692,"about_ca_system_score_gemma":0.0000170765,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009548466,"about_ca_topic_score_gemma":0.00007988061,"domain_scores_codex":[0.999039,0.0001529427,0.0002699493,0.000267405,0.00009054991,0.0001801704],"domain_scores_gemma":[0.9992305,0.0003508133,0.000234175,0.00008822512,0.00006025054,0.00003601583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001283895,0.0001452218,0.9046987,0.00001904203,0.00001883135,7.251802e-7,0.0002815655,0.00001455019,0.05476242,0.0003326264,0.0002559239,0.03934198],"study_design_scores_gemma":[0.0001732556,0.0001545083,0.9933843,0.000003420823,0.00003076604,0.000003916614,0.0006240604,0.00006026815,0.002222401,0.0002668786,0.002979583,0.00009663915],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974622,0.0005679268,0.00004258216,0.0009249242,0.0001129425,0.0005480939,0.0002713322,0.00002424662,0.0000457668],"genre_scores_gemma":[0.9982575,0.00007301689,0.0003858299,0.0001636487,0.00002369348,0.0009229464,0.000132583,0.000001218976,0.00003953206],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08868557,"threshold_uncertainty_score":0.3744331,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2575430651","doi":"10.1007/s11046-017-0109-9","title":"A Case Report of Widespread Majocchi’s Granuloma in a Patient with Systemic Lupus Erythematosus","year":2017,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"University of Manitoba","keywords":"Terbinafine; Trichophyton rubrum; Medicine; Granuloma; Dermatology; Trichophyton; Granulomatous inflammation; Lesion; Lupus erythematosus; Pathology; Immunology; Antifungal","retraction":null,"screen_n_in":null,"score":{"opus":0.01603882765845573,"gpt":0.2701363066816931,"spread":0.2540974790232374,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001263892,0.0001781507,0.0004670496,0.0001019192,0.00009455693,0.00001954098,0.00008645577,0.00007492846,0.00001788172],"category_scores_gemma":[0.0002259102,0.0001184636,0.00008958347,0.00006656262,0.0001192861,0.0000686639,0.00006851187,0.00009788385,0.00001595701],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006899066,"about_ca_system_score_gemma":0.00007176301,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004258666,"about_ca_topic_score_gemma":0.0000791526,"domain_scores_codex":[0.9988168,0.00003739811,0.00038215,0.0003260334,0.0002034426,0.0002341171],"domain_scores_gemma":[0.9983076,0.00003259424,0.0004093007,0.001050399,0.00008416994,0.0001159383],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"case_report","study_design_gemma":"case_report","study_design_scores_codex":[0.0004075148,0.0002605831,0.4809805,0.000147534,0.00002283391,0.5166451,0.0001623682,8.936182e-7,0.0003696828,0.0000220427,0.0000476347,0.0009332986],"study_design_scores_gemma":[0.003389732,0.0008908604,0.1128293,0.0008427467,0.0001860464,0.8805933,0.0002675199,0.00001131156,0.0007991096,0.00006482564,0.00001062059,0.0001146456],"study_design_candidate":"case_report","study_design_consensus":"case_report","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961984,0.0004616422,0.00001633728,0.00004092831,0.0001689852,0.0006778397,0.00003518239,0.00003796855,0.002362696],"genre_scores_gemma":[0.9989457,0.00001406306,0.0005787358,0.00002488683,0.00001561129,0.00009554715,0.00001660499,0.00002076455,0.000288115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3681512,"threshold_uncertainty_score":0.4830807,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3186299630","doi":"10.1007/s11046-021-00597-3","title":"Phenotypic Plasticity in the Productions of Virulence Factors Within and Among Serotypes in the Cryptococcus neoformans Species Complex","year":2021,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; McMaster University","keywords":"Cryptococcus neoformans; Virulence; Biology; Microbiology; Serotype; Melanin; Virulence factor; Cryptococcosis; Phenotypic plasticity; Phenotype; Genetics; Gene","retraction":null,"screen_n_in":null,"score":{"opus":0.05039685807759026,"gpt":0.2755874145405923,"spread":0.2251905564630021,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002945135,0.00009652496,0.0002026571,0.00006339149,0.0001345467,0.0000174445,0.00007292613,0.00003927505,0.00003449613],"category_scores_gemma":[0.0004550288,0.00004964745,0.00002960048,0.0004028765,0.0002968489,0.00005658574,0.0000476235,0.0002624452,0.000002356215],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001786253,"about_ca_system_score_gemma":0.0000270531,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001328089,"about_ca_topic_score_gemma":0.0009980989,"domain_scores_codex":[0.9992359,0.0001299339,0.0002142361,0.0001588067,0.0001219961,0.000139073],"domain_scores_gemma":[0.9994854,0.0002097381,0.00005461147,0.0001776276,0.00006001947,0.00001257653],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00002056978,0.0001552737,0.9790043,0.00005181369,0.000007057919,0.00004351889,0.01090816,0.00008096299,0.008134934,0.001347598,0.0001950605,0.00005078242],"study_design_scores_gemma":[0.0002058494,0.0001348457,0.9852501,0.00004795889,0.00002331212,0.00006029096,0.01243741,0.0000605684,0.001381047,0.0001998696,0.0001478613,0.00005090825],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966501,0.0001322602,0.00005030198,0.0004549334,0.00008357935,0.0003325458,0.0000123134,0.00001269678,0.002271278],"genre_scores_gemma":[0.9994545,0.00006180619,0.0002014938,0.0001209454,0.00003859171,0.00003814423,0.000005950733,0.000003609472,0.00007494396],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006753888,"threshold_uncertainty_score":0.2024564,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1926655579","doi":"10.1007/s11046-015-9956-4","title":"Erratum to: Coccidioidomycosis in Biopsies with Presumptive Diagnosis of Malignancy in Dogs: Report of Three Cases and Comparative Discussion of Published Reports","year":2015,"lang":"en","type":"erratum","venue":"Mycopathologia","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Medicine; Coccidioides; Pathology; Dermatology; Malignancy; Medical microbiology; Coccidioides immitis; Immunology","retraction":null,"screen_n_in":null,"score":{"opus":0.04895516032767239,"gpt":0.3111948597702998,"spread":0.2622396994426274,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001028957,0.0004237859,0.002328472,0.000847111,0.00003514758,0.0000131612,0.00009495006,0.0004055288,0.00002096951],"category_scores_gemma":[0.002823857,0.0002469403,0.0001147931,0.0009851645,0.0004727023,0.0001478511,0.0002506617,0.0005958336,3.674174e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001212239,"about_ca_system_score_gemma":0.0003749976,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002256951,"about_ca_topic_score_gemma":0.004523206,"domain_scores_codex":[0.996761,0.0001425523,0.001624144,0.0007162496,0.0004644284,0.0002915778],"domain_scores_gemma":[0.996689,0.0002398363,0.001428816,0.0007175332,0.0008205665,0.0001042229],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004812739,0.0005459381,0.8030583,0.0008259753,0.00009577173,0.005150542,0.0020513,0.00001070424,0.0003923174,0.00001046478,0.1873048,0.00007259336],"study_design_scores_gemma":[0.001003929,0.003340443,0.9771827,0.008633449,0.0003035501,0.002540709,0.002306758,0.000007043228,0.002478994,0.0001605418,0.001684275,0.0003575672],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9664629,0.009800608,0.000006229669,0.0003818859,0.001877919,0.00181887,0.0002406358,0.00003096863,0.01937999],"genre_scores_gemma":[0.992892,0.0009460647,0.0007753588,0.00001667452,0.00007006875,0.0004209888,0.0001948336,0.00002666478,0.004657359],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1856205,"threshold_uncertainty_score":0.9999983,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4406235994","doi":"10.1007/s11046-024-00922-6","title":"Molecular Epidemiology and Clinical Aspects of Dermatophytosis in Guiyang, Southwest China (2017–2023): A Single-Institution Retrospective Study","year":2025,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Specialized Research Fund for the Doctoral Program of Higher Education of China; Natural Science Research Project of Guizhou Provincial Education Office; National Natural Science Foundation of China","keywords":"Microsporum canis; Dermatophyte; Epidemiology; Veterinary medicine; Trichophyton; Trichophyton rubrum; Medical microbiology; Retrospective cohort study; Biology; Population; Internal transcribed spacer; Medicine; Dermatology; Internal medicine; Phylogenetic tree; Microbiology; Environmental health; Genetics","retraction":null,"screen_n_in":null,"score":{"opus":0.03135610894762105,"gpt":0.3602265065419433,"spread":0.3288703975943222,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000613814,0.0001703512,0.0007454181,0.0002017554,0.00004561848,0.000004687883,0.00007016486,0.0001503884,0.00001080428],"category_scores_gemma":[0.00188422,0.0001390409,0.0001288295,0.0003255952,0.0002105298,0.00003778714,0.0001035846,0.0002104596,0.000009692505],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001166463,"about_ca_system_score_gemma":0.0000969666,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002276797,"about_ca_topic_score_gemma":0.00009525294,"domain_scores_codex":[0.998248,0.0003394349,0.0006059568,0.0004648817,0.0001005984,0.0002410853],"domain_scores_gemma":[0.9992015,0.0001106655,0.0001679342,0.0003692803,0.00006286974,0.00008769936],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002568382,0.002239296,0.9924369,0.00005157459,0.000106541,0.001583783,0.00009217919,0.000002792618,0.0002946933,0.001643913,0.00004240817,0.001249077],"study_design_scores_gemma":[0.003518085,0.001359563,0.9916663,0.0001543424,0.0003438274,0.000060841,0.000177611,0.00003473405,0.0001196705,0.002470977,0.000008124265,0.00008591482],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907462,0.001424257,0.0001611181,0.0002209914,0.0001857094,0.0007487022,0.00002288431,0.00003811734,0.006452037],"genre_scores_gemma":[0.999193,0.00008500135,0.0003581803,0.000241957,0.00002171016,0.00003642883,0.00001550399,0.000007799546,0.00004042873],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008446806,"threshold_uncertainty_score":0.5669922,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4413848852","doi":"10.1007/s11046-025-00988-w","title":"Genotypic and Phenotypic Investigation of Clinical Aspergillus isolates from Iran Indicates Nosocomial Transmission Events of Aspergillus flavus","year":2025,"lang":"en","type":"article","venue":"Mycopathologia","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"Aspergillosis; Aspergillus flavus; Biology; Aspergillus; Microbiology; Genotyping; Amphotericin B; Aspergillus fumigatus; Itraconazole; Genotype; Immunology; Genetics; Antifungal","retraction":null,"screen_n_in":null,"score":{"opus":0.0334117489666728,"gpt":0.3300322651124235,"spread":0.2966205161457506,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007294207,0.0001878505,0.0007902742,0.0001249352,0.00007010016,0.000004672128,0.0001379441,0.0003457966,0.0001036708],"category_scores_gemma":[0.0005743152,0.0001484741,0.0001730516,0.00025926,0.0004482661,0.00006706717,0.00006532363,0.0003209338,0.000007280171],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002892463,"about_ca_system_score_gemma":0.0001770848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001255378,"about_ca_topic_score_gemma":0.00002450563,"domain_scores_codex":[0.9979349,0.0002385615,0.000979019,0.0004473073,0.0002024378,0.0001977112],"domain_scores_gemma":[0.9987806,0.0003561706,0.000277569,0.0003471334,0.000118644,0.0001198483],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0011275,0.000127657,0.7895686,0.0002117574,0.00005342458,0.000009158728,0.0004418729,0.000001330035,0.1866882,0.0001103664,0.00007594677,0.02158422],"study_design_scores_gemma":[0.001938008,0.0004063968,0.9529651,0.0003761476,0.0002018405,0.00000223055,0.0001652685,0.0001356916,0.04062463,0.002997903,0.0000802401,0.0001065103],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949628,0.002316578,0.001128182,0.0002758183,0.0001936401,0.000393093,0.00003715229,0.00003886043,0.000653856],"genre_scores_gemma":[0.9951079,0.0004454493,0.003934127,0.0001872179,0.000058269,0.000006476584,0.00005574293,0.00001211748,0.0001926697],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1633965,"threshold_uncertainty_score":0.6054599,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}