{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":2,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":2,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"43cd925daf69","filters":{"venue":"Pacific Symposium on Biocomputing"}},"results":[{"id":"W3157439875","doi":"","title":"Pacific symposium on biocomputing 2011","year":2011,"lang":"en","type":"article","venue":"Pacific Symposium on Biocomputing","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Simon Fraser University","funders":"","keywords":"Computer science","authors":[{"name":"Gürkan Bebek","is_ca":false},{"name":"Mark R. Chance","is_ca":false},{"name":"Mehmet Koyutürk","is_ca":false},{"name":"Nathan D. Price","is_ca":false},{"name":"Francisco M. De La Vega","is_ca":false},{"name":"Carlos D. Bustamante","is_ca":false},{"name":"Suzanne M. Leal","is_ca":false},{"name":"James A. Foster","is_ca":false},{"name":"Jason H. Moore","is_ca":false},{"name":"Julie Bernauer","is_ca":false},{"name":"Samuel Coulbourn Flores","is_ca":false},{"name":"Xuhui Huang","is_ca":false},{"name":"Seokmin Shin","is_ca":false},{"name":"Ruhong Zhou","is_ca":false},{"name":"Can Alkan","is_ca":false},{"name":"Emidio Capriotti","is_ca":false},{"name":"Fereydoun Hormozdiari","is_ca":true},{"name":"Eleazar Eskin","is_ca":false},{"name":"Maricel G. Kann","is_ca":false},{"name":"Gil Alterovitz","is_ca":false},{"name":"Silvio Cavalcanti","is_ca":false},{"name":"May D. Wang","is_ca":false},{"name":"Marco Ramoni","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02335552476989084,"gpt":0.256085244653007,"spread":0.2327297198831161,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002859785,0.002011382,0.002185262,0.001910785,0.001851,0.008244449,0.001696433,0.002776189,0.09883227],"category_scores_gemma":[0.002817279,0.001073107,0.0011673,0.003502863,0.0009523996,0.004984927,0.002745192,0.005860408,0.09214805],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00161173,"about_ca_system_score_gemma":0.005234294,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009396881,"about_ca_topic_score_gemma":0.01673466,"domain_scores_codex":[0.9987923,0.0001599282,0.00005835945,0.0002080491,0.0006143116,0.000167094],"domain_scores_gemma":[0.996126,0.000404982,0.0001104714,0.0004157255,0.002020798,0.000921987],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009653185,0.0000610133,0.0001707924,0.0001688522,0.0000205898,0.00003798995,0.00003552906,0.0002806341,0.0007488488,0.007895813,0.9058002,0.08468323],"study_design_scores_gemma":[0.00002279199,0.00002822507,0.0005413202,0.0001154306,0.0000224905,0.00009797071,0.00003540648,0.001626609,0.0004656947,0.004623307,0.9924051,0.00001568668],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.004569095,0.09993768,0.09069015,0.1102209,0.1094366,0.0004700955,0.005196119,0.01468344,0.5647959],"genre_scores_gemma":[0.01204139,0.0843868,0.04134485,0.006593563,0.01559564,0.0003872627,0.008532061,0.002450142,0.8286682],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.09883227,"threshold_uncertainty_score":0.3306269,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W160861302","doi":"","title":"Beyond gap models: Reconstructing alignments and phylogenies under genomic-scale events","year":2008,"lang":"en","type":"article","venue":"Pacific Symposium on Biocomputing","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Scale (ratio); Evolutionary biology; Computer science; Computational biology; Biology; Geography; Cartography","authors":[{"name":"Michael Brudno","is_ca":true},{"name":"Bernard M. E. Moret","is_ca":false},{"name":"Randy Linder","is_ca":false},{"name":"Tandy Warnow","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02254495000606871,"gpt":0.2236989671893312,"spread":0.2011540171832625,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00942206,0.001286984,0.002644953,0.003102085,0.001820391,0.003692683,0.003592275,0.003949755,0.002156757],"category_scores_gemma":[0.04933349,0.0016831,0.002182897,0.004956506,0.003179439,0.009306517,0.00335377,0.005939413,0.000868606],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001055017,"about_ca_system_score_gemma":0.001783491,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004251834,"about_ca_topic_score_gemma":0.004710317,"domain_scores_codex":[0.9971614,0.001519822,0.0001269249,0.0007474631,0.000255322,0.0001890905],"domain_scores_gemma":[0.9654714,0.02802324,0.00155238,0.003422539,0.0006927694,0.0008376444],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.002260173,0.0004532218,0.04479932,0.000878847,0.001009403,0.00163166,0.002671196,0.6483529,0.008055409,0.1088649,0.007779224,0.1732438],"study_design_scores_gemma":[0.00008530002,0.00006464212,0.001714961,0.0000647609,0.0001250204,0.0001879858,0.000362667,0.7113945,0.001054566,0.2831682,0.001747353,0.00003001485],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.3215851,0.00300685,0.6646626,0.003219064,0.0001908649,0.0000798324,0.002135728,0.003028263,0.002091623],"genre_scores_gemma":[0.8128536,0.001581621,0.1773646,0.0006939796,0.0002666846,0.0001445124,0.004965023,0.001396836,0.000733099],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.00942206,"threshold_uncertainty_score":0.04982924,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}