{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":60,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":60,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"73d83b334fcd","filters":{"venue":"Probiotics and Antimicrobial Proteins"}},"results":[{"id":"W2593244669","doi":"10.1007/s12602-017-9264-z","title":"Lactobacillus plantarum and Its Probiotic and Food Potentialities","year":2017,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":416,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"","keywords":"Lactobacillus plantarum; Probiotic; Bacteriocin; Biology; Food Preservatives; Antimicrobial; Adaptation (eye); Microbiology; Biotechnology; Bacteria; Lactic acid; Genetics; Neuroscience","authors":[{"name":"Hamza Ait Seddik","is_ca":false},{"name":"Farida Bendali","is_ca":false},{"name":"Frédérique Gancel","is_ca":false},{"name":"Ismaı̈l Fliss","is_ca":true},{"name":"Giuseppe Spano","is_ca":false},{"name":"Djamel Drider","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.08164279938985401,"gpt":0.2700355008862205,"spread":0.1883927014963664,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002924581,0.0007007812,0.001410287,0.00005612115,0.000877673,0.0008163392,0.0003778897,0.0006218789,0.00001748208],"category_scores_gemma":[0.00004578731,0.0003083664,0.0002022556,0.0001059936,0.0003073102,0.0001796457,0.0007038225,0.0005298624,0.00001017938],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002563519,"about_ca_system_score_gemma":0.00005122655,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004030007,"about_ca_topic_score_gemma":0.0001382804,"domain_scores_codex":[0.997699,0.0000922645,0.0005715766,0.0008709942,0.0001369878,0.0006291739],"domain_scores_gemma":[0.9989856,0.0000619757,0.0004876452,0.0001528676,0.00006676892,0.0002451757],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002568691,0.0002036195,0.0000152434,0.01733207,0.0003765494,0.00002362983,0.00008129391,6.901091e-8,0.004122783,0.00240544,0.0001678651,0.9752458],"study_design_scores_gemma":[0.0004651633,0.001485548,0.000114875,0.01293943,0.0007717372,0.0005990948,0.00002731825,0.00002156133,0.0004778442,0.0003823249,0.9811232,0.001591874],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.004410472,0.9901317,0.000001889039,0.0004074328,0.0002318906,0.002719732,0.001747568,0.00008053188,0.0002687278],"genre_scores_gemma":[0.02755782,0.9711529,0.0001098272,0.00006184194,0.0002982185,0.00002162742,0.0002969478,0.00001157874,0.0004892115],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9809554,"threshold_uncertainty_score":0.9999368,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2913132188","doi":"10.1007/s12602-019-9521-4","title":"Probiotics as an Adjunct Therapy for the Treatment of Halitosis, Dental Caries and Periodontitis","year":2019,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":142,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Fondo Nacional de Desarrollo Científico y Tecnológico","keywords":"Medicine; Periodontitis; Oral cavity; Population; Genitourinary system; Dentistry; Probiotic; Intensive care medicine; Internal medicine; Biology; Environmental health","authors":[{"name":"Mariela Bustamante","is_ca":false},{"name":"B. Dave Oomah","is_ca":true},{"name":"Yohanna Mosi-Roa","is_ca":false},{"name":"Mónica Rubilar","is_ca":false},{"name":"César Burgos‐Díaz","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06724171660405119,"gpt":0.3581437995784152,"spread":0.290902082974364,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002847659,0.0006918482,0.001870782,0.0001498089,0.0005213358,0.0004081182,0.0004310024,0.0007087908,0.00006986334],"category_scores_gemma":[0.00003462549,0.000432872,0.0005252961,0.0001645589,0.000854719,0.0001385314,0.0001560156,0.0003323152,0.00003023562],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007089565,"about_ca_system_score_gemma":0.0003865937,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005290761,"about_ca_topic_score_gemma":0.0007840224,"domain_scores_codex":[0.9975324,0.0002497537,0.0007192904,0.0008134473,0.0001220136,0.0005630994],"domain_scores_gemma":[0.9985064,0.0002059632,0.0004008573,0.000609683,0.0001616715,0.0001154281],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000567764,0.001556158,0.0006535998,0.03178618,0.001985834,0.00003893541,0.0008981025,0.000001261215,0.004900582,0.001326491,0.0008719631,0.9554131],"study_design_scores_gemma":[0.001689647,0.004313078,0.00007994631,0.002712579,0.0007838699,0.0005020568,0.00007153301,0.00001298491,0.004279994,0.0000287957,0.9848645,0.0006609889],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01342251,0.9740207,0.00004801607,0.00007506254,0.0007207458,0.008877925,0.002772789,0.00003034219,0.00003190408],"genre_scores_gemma":[0.003876239,0.9922886,0.0007442036,0.00003446809,0.0003130811,0.0001623494,0.0006187069,0.000106651,0.001855724],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9839926,"threshold_uncertainty_score":0.9998123,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2799547591","doi":"10.1007/s12602-018-9427-6","title":"Whey and Its Derivatives for Probiotics, Prebiotics, Synbiotics, and Functional Foods: a Critical Review","year":2018,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Protein Hydrolysis and Bioactive Peptides","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Fonds de recherche du Québec – Nature et technologies","keywords":"Prebiotic; Lactulose; Synbiotics; Maillard reaction; Functional food; Food science; Lactose; Probiotic; Seasoning; Sugar; Chemistry; Biotechnology; Biology; Biochemistry; Bacteria","authors":[{"name":"Ourdia Kareb","is_ca":true},{"name":"Mohammed Aïder","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0517314778955339,"gpt":0.3137159497480971,"spread":0.2619844718525632,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006411623,0.0009304003,0.001680009,0.0001126789,0.000448133,0.0002491021,0.0002507661,0.0007903034,0.00001092155],"category_scores_gemma":[0.001023964,0.0007651317,0.0003844847,0.0001515085,0.0008971765,0.00002744658,0.0006849838,0.0003822696,0.000005812747],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003046671,"about_ca_system_score_gemma":0.0002809421,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003488911,"about_ca_topic_score_gemma":0.00001467696,"domain_scores_codex":[0.9964994,0.0002097211,0.0009210855,0.001528665,0.0001632801,0.000677885],"domain_scores_gemma":[0.9982635,0.00008938902,0.0004628361,0.0004374264,0.0004660148,0.0002808224],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004782979,0.001343917,0.00003314306,0.6879843,0.003354189,0.00001590728,0.0001037029,7.203716e-7,0.06210801,0.005124049,0.01951873,0.219935],"study_design_scores_gemma":[0.0008512945,0.002542349,0.000009318824,0.05404071,0.002275852,0.0003489523,0.00001140781,0.00006525368,0.02179967,0.0002352878,0.9158552,0.00196469],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001751091,0.9909424,0.001550313,0.0005996756,0.0002164024,0.00555493,0.0008947203,0.00003290097,0.0000335952],"genre_scores_gemma":[0.001308963,0.9874474,0.008816157,0.0003975692,0.0008694247,0.000125965,0.0005888485,0.0001297851,0.0003158597],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.8963365,"threshold_uncertainty_score":0.9994799,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2928359284","doi":"10.1007/s12602-019-09543-8","title":"Characterization of Probiotic Properties of Antifungal Lactobacillus Strains Isolated from Traditional Fermenting Green Olives","year":2019,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":99,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Probiotic; Antifungal; Fermentation; Biology; Lactobacillus; Traditional medicine; Microbiology; Food science; Bacteria; Medicine","authors":[{"name":"Houssam Abouloifa","is_ca":false},{"name":"Yahya Rokni","is_ca":false},{"name":"Reda Bellaouchi","is_ca":false},{"name":"Nabil Ghabbour","is_ca":false},{"name":"Salwa Karboune","is_ca":true},{"name":"Milena Brasca","is_ca":false},{"name":"Riadh Ben Salah","is_ca":false},{"name":"Nour‐Eddine Chihib","is_ca":false},{"name":"Ennouamane Saalaoui","is_ca":false},{"name":"Abdeslam Asehraou","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02221076206180223,"gpt":0.1743328120759128,"spread":0.1521220500141106,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001276232,0.0002027699,0.0003498837,0.00003214002,0.0001034536,0.00005370323,0.0001834791,0.0001524489,0.0001110323],"category_scores_gemma":[0.000009836355,0.0001003403,0.00009439304,0.0002014855,0.0001523743,0.0001746478,0.000103822,0.0001455508,0.000005439308],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001253524,"about_ca_system_score_gemma":0.00002222844,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001712652,"about_ca_topic_score_gemma":0.00003639829,"domain_scores_codex":[0.9987621,0.00004489789,0.00046017,0.0003299887,0.0001452131,0.0002575969],"domain_scores_gemma":[0.9994013,0.00001444304,0.0003254173,0.00007432025,0.0001265489,0.00005794447],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007866523,0.0003339818,0.00272974,0.0002245186,0.00005916302,6.358565e-7,0.0002024264,0.000002820343,0.9944519,0.0002593035,0.000001601016,0.001655286],"study_design_scores_gemma":[0.0004293616,0.0007014237,0.06014154,0.0005654409,0.00003496974,0.000005109409,0.00006424329,0.000671473,0.936961,0.0001168161,0.00004341504,0.0002652107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975917,0.00003956303,0.00002526325,0.0002800291,0.0001007511,0.0009934751,0.0008429515,0.00002985038,0.0000963936],"genre_scores_gemma":[0.9991035,0.00004773201,0.0002146346,0.00004367766,0.00008059014,0.000002769573,0.0003994572,0.000003790751,0.0001037749],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05749086,"threshold_uncertainty_score":0.409176,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2732070176","doi":"10.1007/s12602-017-9299-1","title":"The Effects of Synbiotic Supplementation on Glucose Metabolism and Lipid Profiles in Patients with Diabetes: a Systematic Review and Meta-Analysis of Randomized Controlled Trials","year":2017,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Diet and metabolism studies","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Meta-analysis; Medicine; Strictly standardized mean difference; Internal medicine; Randomized controlled trial; Insulin resistance; Confidence interval; Cochrane Library; Homeostatic model assessment; Quantitative insulin sensitivity check index; Diabetes mellitus; Glucose homeostasis; Insulin; Endocrinology; Insulin sensitivity","authors":[{"name":"Reza Tabrizi","is_ca":false},{"name":"Mahmood Moosazadeh","is_ca":false},{"name":"Kamran Bagheri Lankarani","is_ca":false},{"name":"Maryam Akbari","is_ca":false},{"name":"Seyed Taghi Heydari","is_ca":false},{"name":"Fariba Kolahdooz","is_ca":true},{"name":"Zatollah Asemi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03681631202563736,"gpt":0.3218074669649559,"spread":0.2849911549393186,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.005832992,0.0006003078,0.03787848,0.0004502147,0.0001330013,0.00008212966,0.0001281704,0.0001382535,0.000003111365],"category_scores_gemma":[0.006780234,0.0002356061,0.002252949,0.0002709598,0.0004322506,0.00005399859,0.00009930767,0.0001986675,2.127915e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001136245,"about_ca_system_score_gemma":0.00008624965,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001102862,"about_ca_topic_score_gemma":0.000009014884,"domain_scores_codex":[0.9941595,0.001991407,0.002897487,0.0004148878,0.0002866878,0.0002500268],"domain_scores_gemma":[0.992052,0.002729693,0.004410099,0.0004614084,0.0002790464,0.00006774979],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.0026209,0.0002360531,0.000009425054,0.7903154,0.2049715,7.411723e-7,0.00007400021,4.009444e-8,0.00001409146,0.000135094,0.0000101371,0.001612592],"study_design_scores_gemma":[0.04957508,0.0002704805,0.00003189854,0.1006882,0.8489186,3.120782e-7,0.000004404524,0.000002454212,0.00007256969,0.000004248844,0.0002376356,0.0001941778],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0005677351,0.9509679,0.000003895103,0.0001297548,0.00005410773,0.04804099,0.0002201337,0.000005624093,0.000009853426],"genre_scores_gemma":[0.002693342,0.9954549,0.0001894276,0.00005794785,0.00002076211,0.001346227,0.0001228064,0.00003101752,0.00008354212],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6896272,"threshold_uncertainty_score":0.9764052,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2558734776","doi":"10.1007/s12602-016-9241-y","title":"Current Perspectives on Antihypertensive Probiotics","year":2016,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Blood pressure; Inflammation; Gut flora; Medicine; Renin–angiotensin system; Metabolic syndrome; Pharmacology; Immunology; Internal medicine; Obesity","authors":[{"name":"Eric Banan‐Mwine Daliri","is_ca":false},{"name":"Byong H. Lee","is_ca":true},{"name":"Deog‐Hwan Oh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02599006706798701,"gpt":0.3114881680228479,"spread":0.2854981009548609,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002217318,0.000882617,0.001394389,0.0002199707,0.0003057873,0.0001309144,0.0004012779,0.000715983,0.00001485873],"category_scores_gemma":[0.00009198695,0.0006238365,0.0004933217,0.0001706209,0.0003534904,0.000006930608,0.0003832987,0.0005880831,0.0001288397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007526798,"about_ca_system_score_gemma":0.0006034199,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003488184,"about_ca_topic_score_gemma":0.00000601644,"domain_scores_codex":[0.9969224,0.0001763868,0.0006737918,0.00134244,0.0001322021,0.0007527936],"domain_scores_gemma":[0.9983588,0.00002394606,0.0004645935,0.0006984869,0.000233682,0.0002204414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001782952,0.00116051,0.000006058953,0.03671207,0.0006338259,0.00002880074,0.0002343292,6.903698e-7,0.04380887,0.00210785,0.01560146,0.8995273],"study_design_scores_gemma":[0.0005043109,0.0008500774,0.000003079034,0.01490495,0.0002074177,0.0001410244,0.00002130411,5.725398e-7,0.001692902,0.00001373118,0.9807608,0.0008998624],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002786725,0.9950487,0.0001620773,0.0002013185,0.00051482,0.002950113,0.0006147755,0.00004350459,0.0001859955],"genre_scores_gemma":[0.0004686937,0.9965578,0.0007369184,0.0001449607,0.001036842,0.00003331384,0.0003310702,0.0001577938,0.0005325606],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9651593,"threshold_uncertainty_score":0.9996213,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2946081661","doi":"10.1007/s12602-019-09555-4","title":"Quorum Sensing Circuits in the Communicating Mechanisms of Bacteria and Its Implication in the Biosynthesis of Bacteriocins by Lactic Acid Bacteria: a Review","year":2019,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":80,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; Université Laval","funders":"Fonds de recherche du Québec – Nature et technologies","keywords":"Quorum sensing; Bacteria; Bacteriocin; Lactic acid; Biology; Biochemistry; Autoinducer; Microbiology; Chemistry; Biofilm; Genetics","authors":[{"name":"Ourdia Kareb","is_ca":true},{"name":"Mohammed Aïder","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0435061905777471,"gpt":0.2668978919642819,"spread":0.2233917013865348,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001320943,0.0003363475,0.001134853,0.00004003343,0.0001195914,0.00009404032,0.0006351369,0.0002626686,0.000007915843],"category_scores_gemma":[0.00008699348,0.0001241542,0.0001575337,0.0004939326,0.00009624583,0.00008360062,0.0002451554,0.0004088911,0.000001587683],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002182592,"about_ca_system_score_gemma":0.00003410846,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007367378,"about_ca_topic_score_gemma":0.00007893644,"domain_scores_codex":[0.9977528,0.0005717762,0.0008786435,0.0003707009,0.0001240769,0.0003020414],"domain_scores_gemma":[0.9985843,0.0002639368,0.0008169005,0.0002476201,0.00005768621,0.00002959733],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"systematic_review","study_design_scores_codex":[0.000005777604,0.0002003313,0.000004625962,0.02111541,0.0000376094,0.000001023365,0.0001590142,8.601964e-9,0.6238048,0.000307973,0.00002937983,0.354334],"study_design_scores_gemma":[0.001915553,0.003880094,0.003253861,0.5034789,0.003769415,0.001014941,0.001158109,0.0001069908,0.1404711,0.0006536076,0.3354318,0.004865696],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01943136,0.9732107,0.000005747603,0.001970442,0.00006117067,0.00465939,0.000598046,0.00001000423,0.00005316732],"genre_scores_gemma":[0.1597023,0.8397495,0.0001464592,0.0001772379,0.00002210632,0.0000146291,0.0001791102,0.000004967152,0.000003746102],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.4833337,"threshold_uncertainty_score":0.506286,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2948631669","doi":"10.1007/s12602-019-09559-0","title":"The Effects of Probiotic Supplementation on Clinical Symptom, Weight Loss, Glycemic Control, Lipid and Hormonal Profiles, Biomarkers of Inflammation, and Oxidative Stress in Women with Polycystic Ovary Syndrome: a Systematic Review and Meta-analysis of Randomized Controlled Trials","year":2019,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Ovarian function and disorders","field":"Medicine","cited_by":73,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"","keywords":"Polycystic ovary; Medicine; Internal medicine; Insulin resistance; Strictly standardized mean difference; Glycemic; Meta-analysis; Gastroenterology; Cochrane Library; Weight loss; Insulin; Randomized controlled trial; Endocrinology; Obesity","authors":[{"name":"Reza Tabrizi","is_ca":false},{"name":"Vahidreza Ostadmohammadi","is_ca":false},{"name":"Maryam Akbari","is_ca":false},{"name":"Kamran Bagheri Lankarani","is_ca":false},{"name":"Sina Vakili","is_ca":false},{"name":"Payam Peymani","is_ca":false},{"name":"Maryam Karamali","is_ca":false},{"name":"Fariba Kolahdooz","is_ca":true},{"name":"Zatollah Asemi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02506256365811734,"gpt":0.3102967781582918,"spread":0.2852342145001745,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.006402394,0.0005551007,0.02101214,0.000611064,0.00005990132,0.00004531903,0.00009783653,0.000250412,0.00001308624],"category_scores_gemma":[0.003333788,0.0002623061,0.001080483,0.0005585877,0.0006789329,0.00006886805,0.00005525571,0.0002705125,2.754194e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003501724,"about_ca_system_score_gemma":0.0003145418,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000166735,"about_ca_topic_score_gemma":0.000006025473,"domain_scores_codex":[0.9915322,0.003139673,0.004289169,0.0005075036,0.0002900304,0.0002414333],"domain_scores_gemma":[0.9888412,0.005781032,0.004678198,0.0003431702,0.0002517241,0.000104612],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.06401127,0.0002837572,0.00002199996,0.7237245,0.2109066,0.000005246056,0.00008821896,9.377746e-7,0.000136569,0.000161363,0.0000129784,0.000646601],"study_design_scores_gemma":[0.1249319,0.002496895,0.00003094129,0.09116382,0.7808089,0.00004907855,0.00003389617,0.00008809596,0.00006361184,0.00001164304,0.00002402822,0.0002971495],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00366763,0.9463899,0.0001110888,0.0003288079,0.00004231796,0.04903544,0.0004089571,0.000008408229,0.000007423873],"genre_scores_gemma":[0.04750681,0.9510744,0.0001899302,0.00006186015,0.00001214462,0.0009292067,0.0001505191,0.00003279676,0.00004231804],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6325607,"threshold_uncertainty_score":0.9999829,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2790367325","doi":"10.1007/s12602-018-9389-8","title":"Protective Efficacy of a Pseudoalteromonas Strain in European Abalone, Haliotis tuberculata, Infected with Vibrio harveyi ORM4","year":2018,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Région Bretagne; Conseil Régional de Bretagne","keywords":"Abalone; Pseudoalteromonas; Microbiology; Biology; Vibrio harveyi; Vibrio; Hemolymph; Marine bacteriophage; Haliotis; Bacteria; Fishery; 16S ribosomal RNA; Ecology","authors":[{"name":"Clément Offret","is_ca":true},{"name":"Vincent Rochard","is_ca":false},{"name":"Hélène Laguerre","is_ca":false},{"name":"Jérôme Mounier","is_ca":false},{"name":"Sylvain Huchette","is_ca":false},{"name":"Benjamin Brillet","is_ca":false},{"name":"Patrick Le Chevalier","is_ca":false},{"name":"Yannick Fleury","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007850536854189575,"gpt":0.2121976915617961,"spread":0.2043471547076065,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003417357,0.0003953147,0.0004830519,0.0002573525,0.0002056871,0.00006671965,0.0002700629,0.0001875032,0.0001129779],"category_scores_gemma":[0.00005556329,0.0003182215,0.00009203306,0.0004395162,0.0008157515,0.0001696629,0.0002580015,0.0003675578,0.000123909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003454564,"about_ca_system_score_gemma":0.00007562796,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003376503,"about_ca_topic_score_gemma":0.0006779654,"domain_scores_codex":[0.9980205,0.000281245,0.0004912261,0.0006183248,0.00004911264,0.0005395398],"domain_scores_gemma":[0.9991538,0.00002694624,0.0002531613,0.0003401986,0.0001767396,0.00004915602],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006817127,0.0006687321,0.001917588,0.0002246908,0.0002619156,0.00003069265,0.001099934,0.000006492321,0.9916744,0.0007191916,0.0004476608,0.002267016],"study_design_scores_gemma":[0.0120299,0.00283183,0.1550896,0.001599025,0.0002783346,0.0002452916,0.0001913243,0.00002392716,0.8224896,0.0001024324,0.003810824,0.001307947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941725,0.0001530935,0.001131551,0.0002175943,0.0001220975,0.002554937,0.0002699318,0.00009592677,0.001282423],"genre_scores_gemma":[0.9982347,0.00001920732,0.0008052166,0.0001145283,0.00005883885,0.00001186629,0.000259433,0.00005177988,0.0004444001],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1691848,"threshold_uncertainty_score":0.999927,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2050552711","doi":"10.1007/s12602-009-9033-8","title":"Nisin A and Polymyxin B as Synergistic Inhibitors of Gram-positive and Gram-negative Bacteria","year":2010,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Nisin; Polymyxin; Polymyxin B; Microbiology; Antagonism; Listeria monocytogenes; Bacteria; Listeria; Bacteriocin; Escherichia coli; Biology; Chemistry; Antibiotics; Antimicrobial; Biochemistry","authors":[{"name":"Karim Naghmouchi","is_ca":true},{"name":"Djamel Drider","is_ca":false},{"name":"J. Baah","is_ca":true},{"name":"R. M. Teather","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.003286248628440109,"gpt":0.2118379752600934,"spread":0.2085517266316533,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001547086,0.0002604776,0.0002940439,0.00005878335,0.0001410485,0.0001011102,0.0001043662,0.0002593285,0.000008168786],"category_scores_gemma":[0.0001745805,0.0002393915,0.00004813346,0.00007719641,0.000795386,0.00001310479,0.0002266951,0.0001933538,0.000001357503],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004763018,"about_ca_system_score_gemma":0.00007202358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001455883,"about_ca_topic_score_gemma":0.0001229279,"domain_scores_codex":[0.9988158,0.00005155278,0.0003050156,0.0004769036,0.00007434029,0.0002763632],"domain_scores_gemma":[0.999333,0.00002573747,0.0001891282,0.0002221535,0.0001062926,0.0001236648],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001941504,0.00009556441,0.002488086,0.0001432028,0.00005393246,0.000004939232,0.0001255883,2.247012e-7,0.9946575,0.001008729,0.00006353427,0.001164526],"study_design_scores_gemma":[0.0007523213,0.0005196016,0.01597443,0.0001504744,0.00004202234,0.00006466737,0.00004562003,0.00001327138,0.9814389,0.0003127975,0.0003764958,0.0003094186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998335,0.0001068542,0.0001913475,0.0002439173,0.0001687124,0.0006344584,0.0001194661,0.00001083826,0.0001893997],"genre_scores_gemma":[0.9931612,0.0002092577,0.006093187,0.0000900741,0.0001502735,0.000003113199,0.00004928069,0.00003282507,0.0002107977],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01348634,"threshold_uncertainty_score":0.9762101,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2738328393","doi":"10.1007/s12602-017-9309-3","title":"Isolation and Selection of Potential Probiotic Bacteria from the Pig Gastrointestinal Tract","year":2017,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":42,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Agriculture and Agri-Food Canada","funders":"Fonds de recherche du Québec – Nature et technologies","keywords":"Microbiology; Antimicrobial; Probiotic; Biology; Bacteriocin; Bacteria; Salmonella; Agar; Lactobacillus salivarius; Escherichia coli; Pathogenic bacteria; Gastrointestinal tract; Antimicrobial peptides; Gene; Biochemistry","authors":[{"name":"Luca Lo Verso","is_ca":true},{"name":"Martin Lessard","is_ca":true},{"name":"Guylaine Talbot","is_ca":true},{"name":"Benoît Fernandez","is_ca":true},{"name":"Ismaı̈l Fliss","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0131882697610832,"gpt":0.203932425349111,"spread":0.1907441555880278,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001767332,0.0001566751,0.0001761771,0.00000831477,0.0007409817,0.0003370492,0.0002135966,0.00007946154,0.00003697653],"category_scores_gemma":[0.00004773369,0.00006392588,0.00005254894,0.00004567741,0.0002334275,0.0001628797,0.0001585058,0.0001652087,0.000001918574],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008105114,"about_ca_system_score_gemma":0.00001219799,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000378262,"about_ca_topic_score_gemma":0.0001904001,"domain_scores_codex":[0.9991632,0.00003737271,0.0002306965,0.0002785185,0.00007653029,0.0002136514],"domain_scores_gemma":[0.9994849,0.00003043234,0.0002778203,0.00007564681,0.00007470229,0.00005647795],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005650434,0.0001047993,0.01365505,0.00002040758,0.00001012406,0.000001113593,0.00002935836,0.000001908437,0.9809133,0.0001203014,0.00003655771,0.005050608],"study_design_scores_gemma":[0.0004420911,0.0008036349,0.8872842,0.0002752608,0.00005773385,0.00009328949,0.00003770267,0.001549532,0.108502,0.0005107853,0.0001935873,0.0002501548],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966481,0.00002683362,0.0002524939,0.002245268,0.00007027612,0.0005498645,0.0001314318,0.00002024975,0.00005547783],"genre_scores_gemma":[0.9968195,0.00004667365,0.002785561,0.00005421424,0.0002138224,0.000002278974,0.00003916968,0.000002190744,0.00003661972],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8736292,"threshold_uncertainty_score":0.5699107,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4282971232","doi":"10.1007/s12602-022-09959-9","title":"Screening and Characterization of Some Lactobacillaceae for Detection of Cholesterol-Lowering Activities","year":2022,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":40,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institut National de la Recherche Scientifique; Bio-K+ International (Canada)","funders":"","keywords":"Probiotic; Cholesterol; Dyslipidemia; Lactobacillaceae; Bacteria; Lactobacillus plantarum; Biology; In vitro; Biochemistry; Microbiology; Lactobacillus; Food science; Lactic acid; Endocrinology; Diabetes mellitus","authors":[{"name":"Martin Frappier","is_ca":true},{"name":"Julie Auclair","is_ca":true},{"name":"Samir Bouasker","is_ca":true},{"name":"Sathursha Gunaratnam","is_ca":true},{"name":"Carine Diarra","is_ca":true},{"name":"Mathieu Millette","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01243748031150121,"gpt":0.1920153314110757,"spread":0.1795778510995744,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001479644,0.00008870926,0.0001591712,0.00002249513,0.0002332059,0.00002730325,0.0000624691,0.00004173994,0.000004868583],"category_scores_gemma":[0.000005900368,0.00004994191,0.0000411009,0.00008917712,0.00005962844,0.0001023841,0.0001349973,0.00007491139,2.513266e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000744818,"about_ca_system_score_gemma":0.000004181867,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002248131,"about_ca_topic_score_gemma":0.00001208381,"domain_scores_codex":[0.9994461,0.00001779488,0.000183514,0.0001616453,0.00006126175,0.0001296716],"domain_scores_gemma":[0.9997342,0.00001963055,0.0001658272,0.00002851324,0.00002614286,0.0000256849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000854133,0.00006234085,0.000373488,0.0001018969,0.00001352984,8.01573e-8,0.00007122076,0.000006030363,0.9798245,0.00008206202,6.051981e-7,0.01937883],"study_design_scores_gemma":[0.0002876906,0.0007962819,0.009972023,0.00004502117,0.00001456246,0.000005587633,0.00007862395,0.0003104016,0.9878849,0.00006054335,0.0004275974,0.0001167298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983601,0.00002909719,0.0004822027,0.0001874251,0.00005515047,0.0005521938,0.0003152608,0.00001324784,0.000005342826],"genre_scores_gemma":[0.9995801,0.00005074,0.0001986141,0.00003746869,0.00004225673,0.00001184983,0.00005171894,0.000001849653,0.00002543782],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0192621,"threshold_uncertainty_score":0.2036572,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2092037360","doi":"10.1007/s12602-012-9109-8","title":"Identification and Partial Characterization of Antilisterial Compounds Produced by Dairy Yeasts","year":2012,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":39,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada; Université Laval","funders":"","keywords":"Debaryomyces hansenii; Geotrichum; Candida tropicalis; Biology; Candida parapsilosis; Yeast; Microbiology; Food science; Pichia; Bacteria; Listeria monocytogenes; Listeria; Bacteriocin; Antimicrobial; Candida albicans; Biochemistry","authors":[{"name":"Rima Hatoum","is_ca":true},{"name":"Steve Labrie","is_ca":true},{"name":"Ismaı̈l Fliss","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01257138043359101,"gpt":0.2047157287645721,"spread":0.192144348330981,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002071494,0.0001258485,0.0001653975,0.0000126291,0.000143289,0.00009163113,0.00007862872,0.00009370126,0.00001380826],"category_scores_gemma":[0.00001380536,0.00006434043,0.00002794565,0.0001055958,0.000111046,0.0002002661,0.0000885553,0.00006802231,0.000001900766],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006485863,"about_ca_system_score_gemma":0.000004886317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001381215,"about_ca_topic_score_gemma":0.000001984699,"domain_scores_codex":[0.9991815,0.00003371051,0.0002668711,0.0002135406,0.00007722952,0.0002271356],"domain_scores_gemma":[0.9996384,0.000008039536,0.0001680743,0.00005097672,0.00005521651,0.00007924638],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004342657,0.0002072773,0.002468459,0.00005766783,0.000009972985,8.532634e-8,0.000107,3.750156e-8,0.9941106,0.0001578786,0.00007587533,0.002761657],"study_design_scores_gemma":[0.0001980751,0.0001511144,0.03051389,0.00004101764,0.00001808259,0.000005648094,0.00001327526,0.00006529217,0.9672209,0.00001102128,0.001604051,0.000157605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984182,0.00005604987,0.00005796698,0.0005278243,0.0001876324,0.0005170451,0.0001908276,0.00002343849,0.00002108294],"genre_scores_gemma":[0.9993289,0.00008010329,0.0000587541,0.00004796592,0.0002227378,0.000004428812,0.0001863085,0.00000208156,0.00006876892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02804543,"threshold_uncertainty_score":0.2623726,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4206294744","doi":"10.1007/s12602-021-09901-5","title":"Effects of Treatment with Lactobacilli on Necrotic Enteritis in Broiler Chickens","year":2022,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Animal Nutrition and Physiology","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Egg Farmers of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Canadian Poultry Research Council","keywords":"Broiler; Biology; Microbiology; Lactobacillus salivarius; Immune system; Clostridium perfringens; Ileum; Lactobacillus; Enteritis; CD8; Virginiamycin; Antibiotics; Immunology; Bacteria; Food science; Endocrinology","authors":[{"name":"Bahram Shojadoost","is_ca":true},{"name":"Mohammadali Alizadeh","is_ca":true},{"name":"Nitish Boodhoo","is_ca":true},{"name":"Jake Astill","is_ca":true},{"name":"Seyed Hossein Karimi","is_ca":true},{"name":"Janan Shoja Doost","is_ca":true},{"name":"Khaled Taha-Abdelaziz","is_ca":true},{"name":"Raveendra R. Kulkarni","is_ca":false},{"name":"Shayan Sharif","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007365058640997178,"gpt":0.1768552040347099,"spread":0.1694901453937128,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003486929,0.0001073988,0.0001781186,0.00001593166,0.0001269035,0.00001257796,0.00006503939,0.00003410735,0.00007299092],"category_scores_gemma":[0.000002829828,0.0000448672,0.00003788338,0.0001325212,0.00006417544,0.00002016203,0.00004856571,0.00010056,0.000002060683],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002945946,"about_ca_system_score_gemma":0.000007953346,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002528556,"about_ca_topic_score_gemma":0.0002030765,"domain_scores_codex":[0.999405,0.00006679618,0.000118153,0.000195204,0.00005449211,0.0001603789],"domain_scores_gemma":[0.9998341,0.00003711896,0.00005442047,0.00002593507,0.00001443333,0.00003395445],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002741919,0.0006649126,0.001419925,0.00005254803,0.000009941756,0.00001097913,0.00007966717,0.00001195193,0.9937709,0.0002792016,0.00003726024,0.003388549],"study_design_scores_gemma":[0.007575915,0.08729479,0.3529807,0.0007091128,0.0000692699,0.0001419525,0.0003848208,0.0002156198,0.5229219,0.0008206973,0.02559356,0.00129168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985679,0.00003984917,0.000001048784,0.0005549054,0.00002636516,0.0006297065,0.00008493107,0.00001255016,0.00008274615],"genre_scores_gemma":[0.9994264,0.00008682703,0.00007321753,0.0002498015,0.00002899785,0.000030475,0.00003566151,0.000001280248,0.00006733929],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.470849,"threshold_uncertainty_score":0.1829631,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2950011640","doi":"10.1007/s12602-019-09560-7","title":"Application of Probiotics in Folate Bio-Fortification of Yoghurt","year":2019,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Mount Saint Vincent University","funders":"Tabriz University of Medical Sciences","keywords":"Streptococcus thermophilus; Probiotic; Lactobacillus plantarum; Food science; Fermentation; Lactococcus lactis; Lactobacillus acidophilus; Starter; Lactobacillus; Bifidobacterium; Biology; Lactic acid; Chemistry; Bacteria","authors":[{"name":"Mohammad Khalili","is_ca":false},{"name":"Aziz Homayouni Rad","is_ca":false},{"name":"Ahmad Yari Khosroushahi","is_ca":false},{"name":"Hadi Khosravi","is_ca":true},{"name":"Somayeh Jafarzadeh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007616886089949431,"gpt":0.1929639775036042,"spread":0.1853470914136548,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002396854,0.0001369055,0.000268491,0.00004056898,0.00003793574,0.00002011777,0.0001735678,0.0001449691,0.00001543482],"category_scores_gemma":[0.00001214054,0.00006914259,0.00006072686,0.0003562457,0.00008907476,0.00007753323,0.00008848923,0.0001159384,0.000006704777],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001421582,"about_ca_system_score_gemma":0.00001365901,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001091108,"about_ca_topic_score_gemma":0.00009680133,"domain_scores_codex":[0.9989347,0.00002372578,0.0004598579,0.0002822014,0.00009257654,0.0002069108],"domain_scores_gemma":[0.9994652,0.0000221826,0.0002796254,0.00009981153,0.00009407044,0.00003907213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005331474,0.0002568748,0.0168585,0.0001852213,0.000009898586,1.642879e-7,0.00005363231,0.00002414836,0.9692213,0.002374311,0.000005750435,0.01095687],"study_design_scores_gemma":[0.0005130226,0.001093242,0.06539405,0.000243893,0.0000209788,0.000004512843,0.00006049209,0.002363423,0.9284346,0.001017197,0.0005542561,0.00030031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978245,0.00005713376,0.0001345209,0.0003357132,0.00005145783,0.001301658,0.00007028395,0.00001627761,0.0002084147],"genre_scores_gemma":[0.998765,0.00007975897,0.0009748546,0.00002798677,0.00002281783,0.000005416444,0.0000711964,0.000002252422,0.0000507293],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04853555,"threshold_uncertainty_score":0.2819553,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2056717825","doi":"10.1007/s12602-010-9056-1","title":"Cloning and Characterization of the Gene Cluster Involved in the Production of the Circular Bacteriocin Carnocyclin A","year":2010,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacteriocin; Gene; Biology; Homology (biology); Gene cluster; Genetics; Gene family; Cloning (programming); Genome; Bacteria","authors":[{"name":"Marco J. van Belkum","is_ca":true},{"name":"Leah A. Martin‐Visscher","is_ca":true},{"name":"John C. Vederas","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009054174010903998,"gpt":0.1830961955713122,"spread":0.1740420215604082,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003512432,0.00009500214,0.0001226919,0.000009471357,0.0001744108,0.00004310673,0.0002114397,0.00009142886,0.000002694045],"category_scores_gemma":[0.0000472082,0.00002843704,0.0000485357,0.0002230588,0.0002075182,0.00005425985,0.0001431969,0.0002207646,1.198946e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004025694,"about_ca_system_score_gemma":0.00001131076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007331229,"about_ca_topic_score_gemma":0.0003454723,"domain_scores_codex":[0.9993103,0.00007852511,0.0002271175,0.0001721126,0.00008392329,0.0001280302],"domain_scores_gemma":[0.9996405,0.00001694376,0.0001793644,0.0001001643,0.0000480807,0.00001489962],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001154431,0.00006694686,0.009741546,0.00004256086,0.000004981034,7.86597e-8,0.0002822452,0.000001101307,0.9886526,0.000105817,0.000002262185,0.001088315],"study_design_scores_gemma":[0.0001077078,0.00005599673,0.3296347,0.00009595886,0.00001296038,0.000008494341,0.00004121753,0.00007116712,0.6696309,0.00006000534,0.0002100242,0.00007089993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947302,0.00001344476,0.000002788849,0.004118337,0.0001972889,0.0008965364,0.00002651815,0.00000393271,0.0000109451],"genre_scores_gemma":[0.9996071,0.0000394122,0.00007569345,0.0001608194,0.00008065809,0.000004568121,0.00001069052,0.000001317337,0.00001978172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3198932,"threshold_uncertainty_score":0.1341444,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2054755226","doi":"10.1007/s12602-010-9043-6","title":"Evidence of Antibacterial Activities in Peptide Fractions Originating from Snow Crab (Chionoecetes opilio) By-Products","year":2010,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université Laval; Université du Québec à Rimouski","funders":"","keywords":"Peptide; Biochemistry; Antibacterial activity; Microbiology; Vibrio parahaemolyticus; Vibrio vulnificus; Bacteria; Biology; Chemistry; Chromatography","authors":[{"name":"Lucie Beaulieu","is_ca":true},{"name":"Jacinthe Thibodeau","is_ca":true},{"name":"M. Desbiens","is_ca":true},{"name":"Richard Saint‐Louis","is_ca":true},{"name":"Céline Zatylny‐Gaudin","is_ca":false},{"name":"Sharon Thibault","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0140136090824912,"gpt":0.2379702306691853,"spread":0.2239566215866941,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002879333,0.0003548725,0.0005811491,0.000188928,0.0003072612,0.0001084493,0.0002859584,0.0003613326,0.0002207069],"category_scores_gemma":[0.0003406688,0.000339984,0.00009565496,0.0002182618,0.0007180912,0.0006130358,0.0002133477,0.0008479288,0.00002465031],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002380443,"about_ca_system_score_gemma":0.0001391482,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001627909,"about_ca_topic_score_gemma":0.0005169954,"domain_scores_codex":[0.9981713,0.0001194551,0.0005569925,0.0005947962,0.00005337986,0.0005040409],"domain_scores_gemma":[0.9988599,0.0002802809,0.0003687981,0.0003466383,0.000108964,0.00003536687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002029858,0.0003210321,0.004263272,0.0001598016,0.00006303016,0.000002442664,0.0003506165,0.000003856293,0.9910537,0.0003622666,0.001522159,0.001694857],"study_design_scores_gemma":[0.0008873579,0.0002021298,0.003425506,0.0008335059,0.00003845255,0.00002566064,0.0001643163,0.00001397987,0.9918072,0.0001457665,0.002051895,0.0004042406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963179,0.0004438166,0.0001399457,0.0007656251,0.001082135,0.0006650909,0.0003448568,0.0000619634,0.0001786587],"genre_scores_gemma":[0.9951922,0.0004574329,0.003149197,0.0000810174,0.0001807623,0.00001043981,0.000118349,0.00003814308,0.0007724033],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003009251,"threshold_uncertainty_score":0.9999052,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2768577770","doi":"10.1007/s12602-017-9355-x","title":"Study and Understanding Behavior of Alginate-Inulin Synbiotics Beads for Protection and Delivery of Antimicrobial-Producing Probiotics in Colonic Simulated Conditions","year":2017,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Microbial Metabolites in Food Biotechnology","field":"Nursing","cited_by":31,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Cegep de Saint Hyacinthe; Université Laval","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Synbiotics; Antimicrobial; Inulin; Microbiology; Probiotic; Chemistry; Biology; Food science; Bacteria","authors":[{"name":"Abdelbasset Atia","is_ca":true},{"name":"Ahmed Gomaa","is_ca":true},{"name":"Benoît Fernandez","is_ca":true},{"name":"Muriel Subirade","is_ca":true},{"name":"Ismaı̈l Fliss","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05475104159756906,"gpt":0.3016981417463199,"spread":0.2469471001487509,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007244639,0.000400573,0.0008557351,0.0004873008,0.0006654379,0.0001910998,0.0003216866,0.0004760042,0.00000199747],"category_scores_gemma":[0.000392328,0.0004230124,0.0000796801,0.0002371665,0.001180917,0.0002659434,0.0003620687,0.0004585608,4.049666e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001444146,"about_ca_system_score_gemma":0.00007062666,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004024154,"about_ca_topic_score_gemma":0.0003693206,"domain_scores_codex":[0.9975706,0.0001177711,0.0009028977,0.0007688421,0.0001216147,0.0005182847],"domain_scores_gemma":[0.9981258,0.00008250042,0.0008732002,0.0005887105,0.0002522343,0.00007757879],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005716071,0.001015799,0.008714644,0.001416355,0.00008838569,0.000008342337,0.001028598,0.00007054803,0.9855253,0.0005388618,0.00001726837,0.001004291],"study_design_scores_gemma":[0.004678344,0.002773092,0.0101306,0.001245324,0.0004695837,0.00007587881,0.0005830225,0.001281112,0.9778227,0.0003327159,0.00002014243,0.0005874977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9899328,0.0001263904,0.0005690508,0.0007684645,0.0003822797,0.007847053,0.0003101081,0.00005605694,0.000007747189],"genre_scores_gemma":[0.9945682,0.00006589675,0.005171286,0.00002869328,0.00004496631,0.00002117946,0.00002320088,0.00006525774,0.0000113406],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007825874,"threshold_uncertainty_score":0.9998221,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2101195657","doi":"10.1007/s12602-009-9015-x","title":"Determination of Differentially Expressed Genes Involved in Arabinoxylan Degradation by Bifidobacterium longum NCC2705 Using Real-Time RT-PCR","year":2009,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"","keywords":"Arabinoxylan; Bifidobacterium longum; Bifidobacterium; Arabinose; Biology; Gene; Xylose; Gene expression; Real-time polymerase chain reaction; Molecular biology; Genetics; Biochemistry; Fermentation; Bacteria; Polysaccharide","authors":[{"name":"Patricia Savard","is_ca":true},{"name":"Denis Roy","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009291798795724582,"gpt":0.2380067201945074,"spread":0.2287149213987828,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001104736,0.000177218,0.0002013645,0.00007357303,0.00006695891,0.00003046459,0.0001380689,0.0002255462,0.000003350979],"category_scores_gemma":[0.00001376067,0.0001751917,0.00005440533,0.00009725308,0.00008881269,0.000008451816,0.00006520444,0.00007320976,5.257382e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000012356,"about_ca_system_score_gemma":0.00003871846,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004974418,"about_ca_topic_score_gemma":0.00002280079,"domain_scores_codex":[0.9990153,0.0000570895,0.0003172961,0.0003515682,0.00005454228,0.0002041448],"domain_scores_gemma":[0.999464,0.000003354529,0.0001795762,0.0002313722,0.00007798344,0.00004365147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004535541,0.0001750225,0.0005572174,0.00003727757,0.00000698443,6.902271e-7,0.00001277664,0.000005456479,0.9964805,0.00005150691,0.00007804987,0.002549152],"study_design_scores_gemma":[0.0003903452,0.0002593628,0.001220736,0.00005629436,0.00001594593,0.000004620388,0.000003520355,0.0009656644,0.9965801,0.0001085988,0.0001934626,0.0002013529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9722957,0.00007607783,0.02663109,0.0001751827,0.00001819684,0.0006656438,0.00007173649,0.00001770188,0.00004868076],"genre_scores_gemma":[0.976792,0.0004000256,0.02203386,0.00006908882,0.00004080493,0.00001130352,0.0005627559,0.00001682149,0.00007335605],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004597229,"threshold_uncertainty_score":0.714411,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1971204479","doi":"10.1007/s12602-014-9177-z","title":"Membrane Interactions of Synthetic Peptides with Antimicrobial Potential: Effect of Electrostatic Interactions and Amphiphilicity","year":2014,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Regroupement Québécois sur les Matériaux de Pointe; Université Laval; PROTEO","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Centre québécois sur les matériaux fonctionnels","keywords":"Chemistry; Cationic polymerization; Antimicrobial peptides; Peptide; Vesicle; Protein secondary structure; Calcein; Membrane; Biophysics; Stereochemistry; Combinatorial chemistry; Biochemistry; Organic chemistry; Biology","authors":[{"name":"Matthieu Fillion","is_ca":true},{"name":"Geneviève Valois-Paillard","is_ca":true},{"name":"Aurélien Lorin","is_ca":true},{"name":"Mathieu Noël","is_ca":true},{"name":"Normand Voyer","is_ca":true},{"name":"Michéle Auger","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.004170492805990276,"gpt":0.2067715472255112,"spread":0.2026010544195209,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003162853,0.0003939401,0.0008195755,0.0002501444,0.0002977991,0.00005221894,0.0001665867,0.0001485323,0.00004896867],"category_scores_gemma":[0.00008836747,0.000310539,0.0001418542,0.0001837306,0.001094931,0.0002365221,0.000155323,0.0004267129,0.000008211965],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001887402,"about_ca_system_score_gemma":0.00004621478,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003240325,"about_ca_topic_score_gemma":0.0001401256,"domain_scores_codex":[0.9982315,0.0002669567,0.000555395,0.0004656297,0.0000507459,0.0004297335],"domain_scores_gemma":[0.9988136,0.0002536459,0.0004570218,0.000284305,0.0001445947,0.00004682208],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007222341,0.0002493946,0.0009213523,0.0009714083,0.000256076,0.000001705108,0.0002568064,0.00006031406,0.9943514,0.0005225725,0.0001949839,0.00149178],"study_design_scores_gemma":[0.001617853,0.001415699,0.0008132228,0.0008092239,0.0002807042,0.0004168273,0.00005503749,0.0001034441,0.9937152,0.00004500137,0.0003864865,0.0003413006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955725,0.00007028013,0.002427756,0.0004802376,0.0002072642,0.0008524631,0.0001257031,0.00005510537,0.0002086985],"genre_scores_gemma":[0.998086,0.0001387452,0.001217398,0.00007038423,0.0000398783,0.00001017529,0.00005080784,0.00004508394,0.0003415015],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002513533,"threshold_uncertainty_score":0.9999347,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2260716647","doi":"10.1007/s12602-015-9204-8","title":"Influence of Environmental Factors on Bacteriocin Production by Human Isolates of Lactococcus lactis MM19 and Pediococcus acidilactici MM33","year":2015,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Bio-K+ International (Canada); Institut National de la Recherche Scientifique","funders":"","keywords":"Pediococcus acidilactici; Nisin; Bacteriocin; Food science; Lactococcus lactis; Pediococcus; Yeast extract; Chemistry; Fructose; Microbiology; Biology; Bacteria; Fermentation; Lactic acid; Lactobacillus; Antimicrobial","authors":[{"name":"Mélanie Turgis","is_ca":true},{"name":"Khanh Dang Vu","is_ca":true},{"name":"Mathieu Millette","is_ca":true},{"name":"Claude Dupont","is_ca":true},{"name":"Monique Lacroix","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01422408887857999,"gpt":0.2062155404180089,"spread":0.1919914515394289,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001660326,0.0002071219,0.000278165,0.00002426567,0.0001316397,0.00004058554,0.0001237142,0.0001345412,0.00001083361],"category_scores_gemma":[0.00003651683,0.000101366,0.00004453805,0.0001074892,0.0002518714,0.0001522839,0.0001131912,0.0001588012,0.000001238981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002138803,"about_ca_system_score_gemma":0.000009404,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001053733,"about_ca_topic_score_gemma":0.00002245697,"domain_scores_codex":[0.9989662,0.00004192525,0.0003151548,0.0003337025,0.0001162779,0.0002267078],"domain_scores_gemma":[0.9994875,0.00002303732,0.0002518647,0.0000764721,0.00004297742,0.0001181317],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007311942,0.0003093797,0.01083571,0.00005438089,0.00002052326,3.989717e-7,0.0001962205,0.00001032011,0.9872478,0.00003387657,0.00006042931,0.001157896],"study_design_scores_gemma":[0.0003141518,0.001742522,0.06724194,0.0001001852,0.00002646857,0.000004534236,0.0001407985,0.00000889109,0.9295985,0.00006408556,0.0005223308,0.0002355669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985268,0.00005717251,0.000001183612,0.0003105949,0.00004737997,0.000715035,0.000276338,0.00001818461,0.00004731346],"genre_scores_gemma":[0.9996258,0.000092682,0.00006279079,0.00003091941,0.00004533054,0.000003645894,0.00006951627,0.000003174729,0.00006616422],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05764922,"threshold_uncertainty_score":0.4133586,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3091627914","doi":"10.1007/s12602-020-09711-1","title":"Anti-Proliferative and Anti-Biofilm Potentials of Bacteriocins Produced by Non-Pathogenic Enterococcus sp.","year":2020,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Regina","funders":"","keywords":"Bacteriocin; Enterococcus faecium; Biofilm; Microbiology; Antimicrobial; Biology; Virulence; Enterococcus; Antibiotics; Bacteria; Gene; Genetics","authors":[{"name":"Fatma Molham","is_ca":false},{"name":"Ahmed S. Khairalla","is_ca":true},{"name":"Ahmed F. Azmy","is_ca":false},{"name":"Eman El-Gebaly","is_ca":false},{"name":"Ahmed O. El‐Gendy","is_ca":false},{"name":"Sameh AbdelGhani","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006263107165034552,"gpt":0.1986736472968209,"spread":0.1924105401317864,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005968234,0.0002364901,0.0003255657,0.00002172256,0.000094561,0.00005897842,0.0001208666,0.0001869358,0.000007680007],"category_scores_gemma":[0.00003794537,0.0002045126,0.00006572893,0.00008793965,0.0001685564,0.00001375304,0.0001952479,0.0001146536,0.000001325037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003372425,"about_ca_system_score_gemma":0.00003238586,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005846669,"about_ca_topic_score_gemma":6.436437e-7,"domain_scores_codex":[0.9988347,0.00003513995,0.0003166065,0.0005088358,0.00007271652,0.0002320502],"domain_scores_gemma":[0.9994622,0.000002385787,0.0001713159,0.0001381723,0.00009729994,0.0001286092],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008631635,0.00004903422,0.002286445,0.0002749352,0.00004676195,0.000001165311,0.00009170461,8.604046e-7,0.9965504,0.00000889579,0.0002156277,0.0003878644],"study_design_scores_gemma":[0.0005841013,0.0004026972,0.003748737,0.00004721269,0.0000293202,0.00001213424,0.00001085,0.00007259545,0.9945348,0.000004557479,0.0003052854,0.0002477117],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969689,0.000165002,0.000634682,0.00105801,0.0000543998,0.0007318606,0.0003633284,0.00001234835,0.00001149741],"genre_scores_gemma":[0.9977867,0.0003845945,0.000797959,0.0004545967,0.0001683597,0.000005341211,0.0003537778,0.00002339636,0.00002526235],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002015591,"threshold_uncertainty_score":0.8339782,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1977083219","doi":"10.1007/s12602-012-9111-1","title":"Stability and Inhibitory Activity of Pediocin PA-1 Against Listeria sp. in Simulated Physiological Conditions of the Human Terminal Ileum","year":2012,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Pediococcus acidilactici; Bacteriocin; Listeria; Microbiology; Ileum; Listeria monocytogenes; Chemistry; Bacteria; Minimum inhibitory concentration; Biology; Lactic acid; Antibiotics; Biochemistry; Antimicrobial","authors":[{"name":"Gwenaëlle Le Blay","is_ca":false},{"name":"Riadh Hammami","is_ca":true},{"name":"Christophe Lacroix","is_ca":false},{"name":"Ismaı̈l Fliss","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0498975869421033,"gpt":0.2991219848508973,"spread":0.249224397908794,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002155863,0.0001468853,0.0002293216,0.00002231259,0.00008652037,0.0000089349,0.0001155831,0.0001744271,0.000005289726],"category_scores_gemma":[0.00004493901,0.000112184,0.00006265659,0.00006196538,0.0005116436,0.00001138103,0.0004157957,0.0001167868,1.360175e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001638289,"about_ca_system_score_gemma":0.00003870486,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003423177,"about_ca_topic_score_gemma":0.00002675755,"domain_scores_codex":[0.9991297,0.0001082154,0.0002751318,0.0002288185,0.00005454287,0.000203572],"domain_scores_gemma":[0.999458,0.000009139917,0.0001768646,0.000256776,0.000052307,0.00004693147],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007503197,0.0002991095,0.01955109,0.0002059271,0.00001590722,3.202498e-7,0.00008782238,0.00001076819,0.9796109,0.00005147471,0.00001390608,0.00007776028],"study_design_scores_gemma":[0.0004707135,0.0001776291,0.08841663,0.00006158786,0.00001348699,0.000004860369,0.00002249847,0.00002536846,0.9106132,0.0000219202,0.00004786323,0.0001242006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990038,0.00005928114,0.00001562336,0.00004222865,0.00009331766,0.0005420971,0.0001691875,0.000004227362,0.00007021229],"genre_scores_gemma":[0.9996154,0.00002983895,0.00016029,0.0000416195,0.00009008338,0.000003747725,0.00003744815,0.00001123913,0.00001037609],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06899764,"threshold_uncertainty_score":0.4574732,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2010105699","doi":"10.1007/s12602-009-9032-9","title":"Probiotic-Induced Priming of Innate Immunity to Protect Against Rotaviral Infection","year":2009,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Probiotic; Biology; Rotavirus; Innate immune system; Immune system; Priming (agriculture); Microbiology; Immunity; Pathogen; Lactobacillus plantarum; Immunology; Virology; Gene; Virus; Genetics; Bacteria","authors":[{"name":"Alison Thompson","is_ca":true},{"name":"Elaine Van Moorlehem","is_ca":true},{"name":"Palok Aich","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02591178252248953,"gpt":0.298984706980628,"spread":0.2730729244581385,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004882958,0.0002230981,0.0005195401,0.0002310715,0.0001498443,0.00003616975,0.00009980535,0.0001562612,0.000005581179],"category_scores_gemma":[0.0003761188,0.0001945827,0.000110312,0.0002809952,0.0001004685,0.0001065994,0.0001215121,0.0004727614,0.000008807433],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005865806,"about_ca_system_score_gemma":0.000115627,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001688765,"about_ca_topic_score_gemma":0.00002121473,"domain_scores_codex":[0.9983868,0.0001290573,0.0004890058,0.0003369021,0.0001269666,0.0005312954],"domain_scores_gemma":[0.999194,0.000006536818,0.0001414778,0.0002618227,0.0001695668,0.0002266475],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005393795,0.0003577821,0.00185932,0.0003883125,0.00003383468,0.00001378811,0.0001241863,0.00002037802,0.9683806,0.0000723317,0.0001168514,0.02809319],"study_design_scores_gemma":[0.002549587,0.00983699,0.07536642,0.001874847,0.00004832893,0.0001558068,0.0000183995,0.0004421864,0.9087157,0.0001522035,0.0004784633,0.0003610177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9919703,0.00002145815,0.001181803,0.00326447,0.00005876516,0.00307697,0.00001465757,0.00006393272,0.0003476721],"genre_scores_gemma":[0.9893945,0.00008884129,0.00939058,0.0008893452,0.00009899971,0.00001596614,0.0000271898,0.00001996936,0.00007458683],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07350711,"threshold_uncertainty_score":0.7934852,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4381716743","doi":"10.1007/s12602-023-10105-2","title":"Anti-Inflammatory, Antioxidant, Metabolic and Gut Microbiota Modulation Activities of Probiotic in Cardiac Remodeling Condition: Evidence from Systematic Study and Meta-Analysis of Randomized Controlled Trials","year":2023,"lang":"en","type":"review","venue":"Probiotics and Antimicrobial Proteins","topic":"Cardiac Health and Mental Health","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Carleton University","funders":"","keywords":"Probiotic; Medicine; Ejection fraction; Internal medicine; Heart failure; Randomized controlled trial; Gut flora; Ventricular remodeling; Cardiology; Biology; Immunology","authors":[{"name":"Nurpudji Astuti Taslim","is_ca":false},{"name":"Muhammad Yusuf","is_ca":false},{"name":"Ade Meidian Ambari","is_ca":false},{"name":"Imke Maria Del Rosario Puling","is_ca":false},{"name":"Filzatuz Zahro Ibrahim","is_ca":false},{"name":"Hardinsyah Hardinsyah","is_ca":false},{"name":"Rudy Kurniawan","is_ca":false},{"name":"William Ben Gunawan","is_ca":false},{"name":"Nelly Mayulu","is_ca":false},{"name":"Victor F. F. Joseph","is_ca":false},{"name":"Nindy Sabrina","is_ca":false},{"name":"Mochammad Rizal","is_ca":false},{"name":"Trina Ekawati Tallei","is_ca":false},{"name":"Bonglee Kim","is_ca":false},{"name":"Apollinaire Tsopmo","is_ca":true},{"name":"Fahrul Nurkolis","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1287386720844574,"gpt":0.3969553165361382,"spread":0.2682166444516808,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.01433455,0.0007848596,0.04630606,0.001682683,0.0001203115,0.0000895498,0.0001109846,0.0004243808,0.000007081155],"category_scores_gemma":[0.001923548,0.0005071067,0.00406984,0.0009240643,0.000308813,0.0001547047,0.0001578157,0.0004340046,7.687455e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007282173,"about_ca_system_score_gemma":0.0005545044,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007063399,"about_ca_topic_score_gemma":0.00007475316,"domain_scores_codex":[0.9871968,0.005099273,0.006014796,0.0008804543,0.0003946539,0.0004140036],"domain_scores_gemma":[0.9910389,0.003755241,0.004220481,0.0005459452,0.0002384942,0.000200923],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","study_design_scores_codex":[0.007537897,0.0005778371,0.0001478736,0.7470511,0.23289,0.00001636038,0.001382001,0.00004173836,0.009027139,0.00008118086,0.000004936795,0.001241958],"study_design_scores_gemma":[0.03924517,0.0002213568,0.0002050275,0.05277168,0.9055016,0.00002219183,0.0002458548,0.0009877627,0.0002695616,0.00001836392,0.00001215649,0.0004992781],"study_design_candidate":"meta_analysis","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.09520455,0.8575665,0.0001032921,0.00005884035,0.0001377578,0.04590733,0.0009858491,0.0000321269,0.000003793501],"genre_scores_gemma":[0.2658248,0.7329291,0.0004782428,0.00001422966,0.00005835433,0.0004672884,0.0001381199,0.0000563375,0.00003353443],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.6942794,"threshold_uncertainty_score":0.999738,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2900843389","doi":"10.1007/s12602-018-9484-x","title":"Identification of Peptides Implicated in Antibacterial Activity of Snow Crab Hepatopancreas Hydrolysates by a Bioassay-Guided Fractionation Approach Combined with Mass Spectrometry","year":2018,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Protein Hydrolysis and Bioactive Peptides","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vibrio parahaemolyticus; Antimicrobial peptides; Hepatopancreas; Biochemistry; Antibacterial activity; Biology; Chemistry; Peptide; Microbiology; Bacteria","authors":[{"name":"Emna El Menif","is_ca":true},{"name":"Clément Offret","is_ca":true},{"name":"Steve Labrie","is_ca":true},{"name":"Lucie Beaulieu","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007150474573841251,"gpt":0.224903708260747,"spread":0.2177532336869058,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003514335,0.0002241933,0.0003575941,0.0001532071,0.00008355536,0.0000416675,0.0001609993,0.0001906516,0.000003862638],"category_scores_gemma":[0.00007431179,0.0001938386,0.0000686224,0.0003283132,0.0004180204,0.00002886381,0.00007888707,0.0001110869,7.120968e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002145039,"about_ca_system_score_gemma":0.00006420838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001678432,"about_ca_topic_score_gemma":0.00003352096,"domain_scores_codex":[0.9986174,0.00009786017,0.0004390994,0.0004744765,0.000137084,0.000234062],"domain_scores_gemma":[0.9988991,0.00001214081,0.0005053939,0.0002812319,0.0002541391,0.0000480149],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009032913,0.0005334395,0.006803744,0.0001366365,0.00009558292,2.851391e-7,0.00002765817,0.000005628847,0.9910623,0.00006096956,0.00005395577,0.0003164377],"study_design_scores_gemma":[0.0010883,0.001001416,0.01071273,0.00006887841,0.0000338537,0.00001161872,0.00001309817,0.000643195,0.9860896,0.00008620445,0.0000262386,0.0002248152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896702,0.00003546098,0.009000224,0.0001274071,0.00002914346,0.0008790304,0.0001594182,0.0000118564,0.00008732563],"genre_scores_gemma":[0.9963871,0.0000758196,0.003146163,0.00001715459,0.00008043353,0.00002074888,0.0002075042,0.00002492036,0.00004014904],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006716974,"threshold_uncertainty_score":0.7904509,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3203954285","doi":"10.1007/s12602-021-09849-6","title":"Enumeration of Probiotic Strain Lacticaseibacillus rhamnosus GG (ATCC 53103) Using Viability Real-time PCR","year":2021,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Enumeration; Probiotic; Lactobacillus rhamnosus; Strain (injury); Plate count; Biology; Mathematics; Bacteria","authors":[{"name":"Hanan R. Shehata","is_ca":true},{"name":"Steven G. Newmaster","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01853911568734253,"gpt":0.2216910289764291,"spread":0.2031519132890866,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003799362,0.0002791844,0.0004195723,0.00002463958,0.0003040175,0.0001545027,0.0001643376,0.0002367172,0.0001758781],"category_scores_gemma":[0.00009577693,0.0001500407,0.0001415079,0.0004024736,0.0002153887,0.0001621814,0.000201598,0.0002192722,0.000009661182],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004942416,"about_ca_system_score_gemma":0.00008725771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001436986,"about_ca_topic_score_gemma":0.00009526599,"domain_scores_codex":[0.9981699,0.0001344654,0.0005378959,0.0005643699,0.0001541401,0.0004392215],"domain_scores_gemma":[0.999122,0.0000640664,0.0002427883,0.0001517485,0.0002799632,0.0001393836],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004924278,0.0004409905,0.0002842528,0.0001589734,0.00003895819,0.0000114039,0.0000737271,0.00003371393,0.9946649,0.0005577488,0.00002751618,0.003658593],"study_design_scores_gemma":[0.0005989955,0.000642084,0.003320342,0.0002347959,0.00009628136,0.0001159047,0.00009870047,0.002604013,0.9905294,0.0006913659,0.0004958338,0.0005723198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99674,0.0000597937,0.0001117803,0.0009686104,0.0001145816,0.000914855,0.0005082758,0.0000595335,0.000522579],"genre_scores_gemma":[0.9942906,0.00009474299,0.004975991,0.00007892011,0.0001365862,0.000003411657,0.0002171531,0.000005031578,0.0001975202],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004864211,"threshold_uncertainty_score":0.6118483,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2075436907","doi":"10.1007/s12602-010-9054-3","title":"The Effect of Various Probiotic Strains or Avilamycin Feed Additive on Immune Defense Markers and Acute-Phase Response to Salmonella Infection in Chickens","year":2010,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Animal Nutrition and Physiology","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Hôtel-Dieu de Montréal; Université de Montréal; Université du Québec à Montréal","funders":"","keywords":"Biology; Immune system; Probiotic; Salmonella; Microbiology; Antimicrobial; Lysozyme; Immunology; Bacteria; Biochemistry","authors":[{"name":"M. Bielecka","is_ca":false},{"name":"Wanda Smoragiewicz","is_ca":true},{"name":"Andrzej K. Siwicki","is_ca":false},{"name":"Roman Wójcik","is_ca":false},{"name":"Elżbieta Biedrzycka","is_ca":false},{"name":"Andrzej Orłowski","is_ca":false},{"name":"Signe Kask","is_ca":false},{"name":"J. Jankowski","is_ca":false},{"name":"Barbara Karska-Wysocki","is_ca":true},{"name":"Daniela Ham","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006282841220562365,"gpt":0.2336076530498175,"spread":0.2273248118292551,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005373237,0.000193686,0.0002694793,0.00003591341,0.0002813292,0.00006434161,0.00009923613,0.0001705798,0.00002451017],"category_scores_gemma":[0.0001806348,0.00007262345,0.00005927238,0.0002357573,0.0002402294,0.00004183282,0.00008032413,0.0003433584,0.000005053224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001176335,"about_ca_system_score_gemma":0.00001515448,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002170156,"about_ca_topic_score_gemma":0.001461713,"domain_scores_codex":[0.9988266,0.0002635491,0.0002624279,0.0003019625,0.0000709443,0.0002744995],"domain_scores_gemma":[0.9993344,0.000354029,0.0001089063,0.0000674245,0.00004624779,0.00008898282],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.009252918,0.0001950904,0.0004085562,0.00003031098,0.00002012551,0.000008190778,0.0000836758,0.000001420059,0.98311,0.0001104498,0.00006847629,0.006710845],"study_design_scores_gemma":[0.00449163,0.03445237,0.5296506,0.0003870282,0.00006996977,0.0001273842,0.00007604923,0.0001707359,0.4277942,0.0001997559,0.001929813,0.0006504633],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968506,0.00000910204,0.00000232138,0.001261116,0.00008406359,0.00154497,0.0001859409,0.00002227775,0.00003961388],"genre_scores_gemma":[0.9995121,0.00009615922,0.0001022846,0.000108985,0.00005298298,0.00001909305,0.00003142646,0.000002982656,0.00007395376],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5553157,"threshold_uncertainty_score":0.2961498,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4386271980","doi":"10.1007/s12602-023-10148-5","title":"A Two Bacteriocinogenic Ligilactobacillus Strain Association Inhibits Growth, Adhesion, and Invasion of Salmonella in a Simulated Chicken Gut Environment","year":2023,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"","keywords":"Salmonella; Strain (injury); Microbiology; Biology; Adhesion; Enterobacteriaceae; Bacteria; Gene; Genetics; Escherichia coli; Chemistry; Anatomy","authors":[{"name":"Saba Miri","is_ca":true},{"name":"Hebatoallah Hassan","is_ca":true},{"name":"Galal Ali Esmail","is_ca":true},{"name":"Emmanuel N. Njoku","is_ca":true},{"name":"Mariem Chiba","is_ca":true},{"name":"Basit Yousuf","is_ca":true},{"name":"Tamer A. Ahmed","is_ca":true},{"name":"Maxwell T. Hincke","is_ca":true},{"name":"Walid Mottawea","is_ca":true},{"name":"Riadh Hammami","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01161951155521749,"gpt":0.1941414216118226,"spread":0.1825219100566051,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004187248,0.0001836989,0.000269089,0.0000525679,0.0001232076,0.00006234492,0.0001012323,0.0001796659,0.00001716702],"category_scores_gemma":[0.000056787,0.0000972022,0.00005401869,0.0003584725,0.00006493265,0.00008347508,0.0002116673,0.0001699993,0.000009338436],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004516878,"about_ca_system_score_gemma":0.00001239167,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001458426,"about_ca_topic_score_gemma":0.0001674689,"domain_scores_codex":[0.998734,0.00006633277,0.0003729928,0.0003570628,0.0001378939,0.0003317136],"domain_scores_gemma":[0.9995769,0.00006065089,0.0001893734,0.00005188676,0.00003958206,0.00008155237],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003965946,0.0001193373,0.01435309,0.00006042878,0.00001640483,0.000003745042,0.0001417795,0.000026869,0.9827122,0.00006607758,0.00002193523,0.002438461],"study_design_scores_gemma":[0.002080136,0.001211855,0.4022703,0.0005519276,0.00004918583,0.00001344498,0.0001619179,0.001420667,0.5899653,0.001215025,0.0003366351,0.0007235755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978808,0.00005453661,0.000001713642,0.001057118,0.00003499901,0.0007119889,0.0001767479,0.00003636242,0.00004572472],"genre_scores_gemma":[0.9987953,0.0007658353,0.0001227954,0.0000699349,0.00003911779,0.000003167641,0.0001295074,0.000003184815,0.0000712155],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3927469,"threshold_uncertainty_score":0.3963791,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2346611901","doi":"10.1007/s12602-016-9216-z","title":"Enhancement of Nisin Production by Lactococcus lactis subsp. lactis","year":2016,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Nisin; Lactococcus lactis; Food science; Lactobacillus sakei; Fermentation; Skimmed milk; Chemistry; Starter; Bacteriocin; Agar; Bacteria; Lactobacillus; Lactic acid; Biology; Antimicrobial","authors":[{"name":"Dominic Dussault","is_ca":true},{"name":"Khanh Dang Vu","is_ca":true},{"name":"Monique Lacroix","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008836025635884578,"gpt":0.1897726382579834,"spread":0.1809366126220988,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001982241,0.0001937923,0.0002360565,0.00001825578,0.0001603466,0.00004826131,0.0001560086,0.0001258288,0.0001284254],"category_scores_gemma":[0.00003508668,0.00007269166,0.00006875498,0.000176376,0.0001556989,0.0001425169,0.0001040147,0.00009530659,0.00001410792],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002748783,"about_ca_system_score_gemma":0.00001248699,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000777971,"about_ca_topic_score_gemma":0.00007624559,"domain_scores_codex":[0.9987953,0.00003809214,0.0003153439,0.0003966368,0.0001298721,0.0003247304],"domain_scores_gemma":[0.9995061,0.00002821005,0.0001952772,0.00008797109,0.00009543432,0.00008707206],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006365405,0.0002677227,0.0006889448,0.00004146502,0.00002273175,6.861263e-7,0.00002374696,9.916921e-8,0.9601801,0.0001430942,0.001823084,0.03674467],"study_design_scores_gemma":[0.0002728039,0.0005607532,0.001630628,0.0001570193,0.00001616488,0.00000674711,0.0000130943,0.00000280833,0.986321,0.0001627204,0.01063395,0.0002223083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99254,0.0001155421,0.0001607346,0.005536297,0.0001825696,0.0009420346,0.0002011281,0.00004291443,0.0002787552],"genre_scores_gemma":[0.9979668,0.0004306886,0.0003680534,0.00008771911,0.0001207257,0.00001167106,0.00003000672,0.000002918197,0.0009813693],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03652236,"threshold_uncertainty_score":0.296428,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3044148189","doi":"10.1007/s12602-020-09685-0","title":"Effect of Dermaseptin S4 on C. albicans Growth and EAP1 and HWP1 Gene Expression","year":2020,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"","keywords":"Candida albicans; Gene; Biology; Gene expression; Microbiology; Genetics","authors":[{"name":"Johan Samot","is_ca":true},{"name":"Mahmoud Rouabhia","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008403690631011158,"gpt":0.2339309673919267,"spread":0.2255272767609156,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007098306,0.0001296811,0.0002454375,0.00002724975,0.0001015933,0.00001123862,0.00003406701,0.000107005,0.000004700938],"category_scores_gemma":[0.0000565592,0.00009432733,0.00002745095,0.00006527235,0.0001932627,0.00002183168,0.00006643351,0.0001521237,0.000002075923],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002546805,"about_ca_system_score_gemma":0.00001518945,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000725401,"about_ca_topic_score_gemma":3.85686e-7,"domain_scores_codex":[0.9993896,0.00004133851,0.0001477856,0.0002552122,0.00004064006,0.0001253463],"domain_scores_gemma":[0.9996665,0.00005222047,0.00005868731,0.00008259925,0.00002144739,0.0001186204],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003217553,0.00005665193,0.004439604,0.0006574051,0.00001639807,0.000004579808,0.0001065799,4.508339e-7,0.9932292,0.0002117681,0.0001810259,0.0007745955],"study_design_scores_gemma":[0.0011641,0.001629279,0.002502728,0.0001860964,0.00005401774,0.00003109198,0.000004978481,0.00007057306,0.9940794,0.00001730413,0.0001665066,0.00009396323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9943758,0.000143385,0.0001448968,0.004160446,0.00001201331,0.0008715242,0.00004178251,0.00002389828,0.000226295],"genre_scores_gemma":[0.9966552,0.0001488538,0.002401946,0.0006631666,0.00006286925,0.000009435245,0.00002336202,0.00001151297,0.00002360566],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00349728,"threshold_uncertainty_score":0.3846557,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3027754021","doi":"10.1007/s12602-020-09660-9","title":"Divergicin M35-Chitosan Film: Development and Characterization","year":2020,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Nanocomposite Films for Food Packaging","field":"Materials Science","cited_by":15,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université Laval","funders":"","keywords":"Chitosan; Characterization (materials science); Materials science; Nanotechnology; Chemical engineering; Engineering","authors":[{"name":"Rajaa Benabbou","is_ca":true},{"name":"Muriel Subirade","is_ca":true},{"name":"M. Desbiens","is_ca":true},{"name":"Ismaı̈l Fliss","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0129662659014069,"gpt":0.1950079420231995,"spread":0.1820416761217926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007846139,0.000171726,0.0001941879,0.00003787866,0.0002639751,0.0002087192,0.0001131575,0.00006271675,0.00002775207],"category_scores_gemma":[0.00001214104,0.0001595285,0.00001875606,0.0001048081,0.00007878337,0.0001741699,0.0002358627,0.00009597288,0.00003241037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007427822,"about_ca_system_score_gemma":0.00003678609,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007094143,"about_ca_topic_score_gemma":0.000002106091,"domain_scores_codex":[0.9990336,0.00002814071,0.0002383702,0.0003590645,0.00009307509,0.000247725],"domain_scores_gemma":[0.9996467,0.00000691531,0.0001029278,0.00008540907,0.00002311553,0.0001349448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003104328,0.00003004937,0.0005190834,0.0001816199,0.000006244758,0.000005357031,0.001305117,0.000004538549,0.9963744,0.0001624488,0.00002663808,0.001353407],"study_design_scores_gemma":[0.0003570093,0.00009902883,0.001495142,0.0000863868,0.00001077538,0.0000124504,0.00001581417,0.0003166646,0.9953933,0.000006867472,0.001981149,0.0002253503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954882,0.00002889694,0.00212128,0.001431183,0.0001020111,0.0005836688,0.00004556056,0.00009349913,0.0001057286],"genre_scores_gemma":[0.985429,0.00001856152,0.01372363,0.0006153178,0.00009576887,0.000005082626,0.00005866874,0.00002075809,0.00003313825],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01160235,"threshold_uncertainty_score":0.6505384,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3044545125","doi":"10.1007/s12602-020-09687-y","title":"Compatibility, Cytotoxicity, and Gastrointestinal Tenacity of Bacteriocin-Producing Bacteria Selected for a Consortium Probiotic Formulation to Be Used in Livestock Feed","year":2020,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"Région Hauts-de-France","keywords":"Bacteriocin; Probiotic; Enterococcus faecalis; Microbiology; Escherichia coli; Biology; Bacteria; Antibiotics; Antimicrobial; Biochemistry","authors":[{"name":"Mégane Eveno","is_ca":true},{"name":"Patricia Savard","is_ca":true},{"name":"Yanath Belguesmia","is_ca":false},{"name":"Laurent Bazinet","is_ca":true},{"name":"Frédérique Gancel","is_ca":false},{"name":"Djamel Drider","is_ca":false},{"name":"Ismaı̈l Fliss","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03642649413409967,"gpt":0.2324261456390465,"spread":0.1959996515049469,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002683234,0.0002338502,0.0004248984,0.00003371396,0.0001445749,0.0001061542,0.0001465426,0.00008921712,0.000009199022],"category_scores_gemma":[0.0002318293,0.0001300772,0.00005306372,0.0004029718,0.00009347642,0.0001184698,0.0001986851,0.0001573978,6.552898e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002533661,"about_ca_system_score_gemma":0.00003192464,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001143298,"about_ca_topic_score_gemma":0.0004863556,"domain_scores_codex":[0.9984393,0.00005132626,0.0004990777,0.0005447441,0.0000939905,0.0003716002],"domain_scores_gemma":[0.9993146,0.00007116038,0.000191173,0.00006518703,0.000177584,0.0001802909],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002815334,0.000218863,0.02208868,0.0002864303,0.00001101498,8.444188e-7,0.0003883781,0.00001359017,0.9761401,0.00009785823,0.00001232828,0.0004603862],"study_design_scores_gemma":[0.001384328,0.003978895,0.4784607,0.0004221867,0.00003395609,0.00002734712,0.00009719342,0.003336722,0.511644,0.0001037868,0.00003703547,0.0004738079],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9922214,0.000006060276,0.0004338606,0.004026732,0.00002006595,0.002995981,0.0002505924,0.00003967985,0.000005633597],"genre_scores_gemma":[0.9890104,0.000003841059,0.01049346,0.000307802,0.00006225354,0.00001449479,0.00009754489,0.000004270979,0.000005928057],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4644961,"threshold_uncertainty_score":0.5304393,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2908889834","doi":"10.1007/s12602-018-9508-6","title":"The Effect of Synbiotic Supplementation on Growth Parameters in Mild to Moderate FTT Children Aged 2–5 Years","year":2019,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Child Nutrition and Feeding Issues","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Concordia University","funders":"","keywords":"Placebo; Prebiotic; Medicine; Probiotic; Synbiotics; Internal medicine; Gastroenterology; Nutritional Supplementation; Randomized controlled trial; Placebo group; Appetite; Weight gain; Placebo-controlled study; Body weight; Biology; Food science; Double blind; Bacteria","authors":[{"name":"Majid Aflatoonian","is_ca":false},{"name":"Abbas Taghavi Ardakani","is_ca":false},{"name":"Seyedeh Zalfa Modarresi","is_ca":false},{"name":"Vajiheh Modaresi","is_ca":false},{"name":"Mehran Karimi","is_ca":false},{"name":"Mahtab Ordooei","is_ca":false},{"name":"Mahmood Vakili","is_ca":false},{"name":"Bahar Pakseresht","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006918996442925159,"gpt":0.2408724733855125,"spread":0.2339534769425874,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002346664,0.0001206032,0.0002382858,0.0001135595,0.0000543158,0.0000406408,0.00006009651,0.00005393897,0.000005866261],"category_scores_gemma":[0.00004567517,0.0000868635,0.00005143215,0.0001459437,0.00005079373,0.00002922723,0.00003316113,0.0001479946,0.00001458195],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002365057,"about_ca_system_score_gemma":0.00001065358,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006985795,"about_ca_topic_score_gemma":0.00001419788,"domain_scores_codex":[0.9992482,0.00005151875,0.000211957,0.0002061212,0.0001019456,0.0001802715],"domain_scores_gemma":[0.9996804,0.00005781319,0.00005734689,0.0001283131,0.00002264688,0.00005346799],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.007917153,0.0006872023,0.2823395,0.001480991,0.0002397959,0.00001411626,0.00167164,0.0003761814,0.6977318,0.0006637733,0.003865892,0.003011947],"study_design_scores_gemma":[0.004732538,0.002880658,0.1762925,0.0008563458,0.00003996756,0.00001029704,0.00002005928,0.0001396809,0.8147991,0.00004360257,0.0000243266,0.0001608941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955073,0.00002169898,0.00001697579,0.001774966,0.00007085941,0.002507285,0.00002415485,0.00001599725,0.00006074322],"genre_scores_gemma":[0.9987831,0.00007576191,0.0006746047,0.0002891398,0.00002932625,0.000007052055,0.00003833932,0.00001596015,0.0000866909],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1170673,"threshold_uncertainty_score":0.354219,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2742334263","doi":"10.1007/s12602-017-9302-x","title":"Evaluation of Lactic Acid Bacteria Isolated from Fermented Plant Products for Antagonistic Activity Against Urinary Tract Pathogen Staphylococcus saprophyticus","year":2017,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Beef Cattle Research Council; Ministry of Science and Technology, Taiwan","keywords":"Staphylococcus saprophyticus; Microbiology; Pathogen; Antimicrobial; Biology; Bacteria; Antibiotics; Urinary system; Staphylococcus aureus; Staphylococcus","authors":[{"name":"Cheng‐Chih Tsai","is_ca":false},{"name":"Tzu-Min Lai","is_ca":false},{"name":"Peipei Lin","is_ca":false},{"name":"You-Miin Hsieh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03837784315234393,"gpt":0.2503010795012973,"spread":0.2119232363489534,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006815792,0.0002922179,0.0003917528,0.00002386945,0.0007205991,0.0002734087,0.0003323877,0.0001913521,0.00001710442],"category_scores_gemma":[0.0002052769,0.0001496461,0.0001034416,0.00008146565,0.000175235,0.0002282769,0.0001712898,0.0001744905,0.000002657152],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005296804,"about_ca_system_score_gemma":0.00008014382,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001111523,"about_ca_topic_score_gemma":0.00004852885,"domain_scores_codex":[0.9983256,0.0001084959,0.0003525174,0.0005713992,0.000253547,0.0003884404],"domain_scores_gemma":[0.9986607,0.00003810973,0.0005535863,0.0002357927,0.0004187866,0.00009304815],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004182475,0.001037756,0.0003221481,0.0001163838,0.00008227979,0.000005098304,0.00004838163,0.000002075878,0.9707462,0.00001669136,0.00002834548,0.02717639],"study_design_scores_gemma":[0.001580824,0.002159155,0.0673639,0.0002744865,0.0003053971,0.00001052721,0.0000210662,0.004556164,0.922565,0.0003174366,0.0003406665,0.0005053451],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9924632,0.0001545584,0.00004874863,0.0008034269,0.0003181081,0.002570673,0.003549643,0.00003517813,0.00005645581],"genre_scores_gemma":[0.9982777,0.00008798736,0.0006791004,0.00003632423,0.0002918007,0.00003694635,0.0005673929,0.000006047318,0.0000167485],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06704175,"threshold_uncertainty_score":0.6102391,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3048628285","doi":"10.1007/s12602-020-09695-y","title":"Real-Time PCR Assays for the Specific Identification of Probiotic Strains Lactobacillus gasseri BNR17 and Lactobacillus reuteri LRC (NCIMB 30242)","year":2020,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Lactobacillus reuteri; Lactobacillus gasseri; Probiotic; Lactobacillus; Repeatability; Biology; Microbiology; Bacteria; Chemistry; Genetics","authors":[{"name":"Hanan R. Shehata","is_ca":true},{"name":"Subramanyam Ragupathy","is_ca":true},{"name":"Shara Allen","is_ca":false},{"name":"Gregory Leyer","is_ca":false},{"name":"Steven G. Newmaster","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02601833527811758,"gpt":0.2146844985335568,"spread":0.1886661632554393,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004434648,0.0003157004,0.0004003949,0.00002104788,0.0004326733,0.0002746897,0.0003582328,0.0002037035,0.00003455165],"category_scores_gemma":[0.00007093447,0.0001431812,0.0001374599,0.0002934721,0.0003135914,0.0001485954,0.0002121718,0.0002107985,0.000009548151],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002430853,"about_ca_system_score_gemma":0.00002788948,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004199633,"about_ca_topic_score_gemma":0.00004008972,"domain_scores_codex":[0.9981523,0.00006020199,0.0005932347,0.000595274,0.0001622511,0.000436803],"domain_scores_gemma":[0.9990553,0.0001042387,0.0003542099,0.000147516,0.0001725908,0.0001661591],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001150724,0.0001250963,0.0001183427,0.0001854084,0.00005223012,0.00000159841,0.0002141652,0.000009915486,0.9908264,0.001008218,0.0004743235,0.006869172],"study_design_scores_gemma":[0.002630759,0.004240786,0.03921048,0.0004595684,0.0003351823,0.00006924965,0.0006800393,0.007414575,0.921435,0.001114776,0.02059846,0.00181114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9813813,0.0002717412,0.0006640949,0.01219956,0.0001705778,0.003687412,0.001257029,0.0001194344,0.0002488495],"genre_scores_gemma":[0.9970285,0.0009958599,0.001208083,0.0001987842,0.000251659,0.00001904765,0.0001405751,0.000008284087,0.0001492203],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06939147,"threshold_uncertainty_score":0.5838761,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2006642407","doi":"10.1007/s12602-011-9066-7","title":"Lactobacillus plantarum 299v Prevents Caspase-Dependent Apoptosis In Vitro","year":2011,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Apoptosis; Lactobacillus plantarum; Cytokine; TUNEL assay; Biology; Caspase 3; Caspase; Probiotic; Inflammation; Programmed cell death; Molecular biology; Microbiology; Chemistry; Cell biology; Immunology; Biochemistry; Lactic acid; Bacteria","authors":[{"name":"Natalie S. Dykstra","is_ca":true},{"name":"Lucie Hyde","is_ca":true},{"name":"Alexander MacKenzie","is_ca":true},{"name":"David R. Mack","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03420598037330348,"gpt":0.2601777206065607,"spread":0.2259717402332573,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000297277,0.0001982045,0.0004409538,0.000156194,0.0000695155,0.00002044384,0.0001090219,0.000140339,0.00008166548],"category_scores_gemma":[0.00008435288,0.0001700633,0.00007656662,0.00009847386,0.0001413065,0.000080809,0.0001545844,0.0003736241,0.00003564594],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005707628,"about_ca_system_score_gemma":0.00006042999,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008435083,"about_ca_topic_score_gemma":0.0001415704,"domain_scores_codex":[0.9984312,0.00009557001,0.0003631055,0.0003716598,0.0001138841,0.0006245795],"domain_scores_gemma":[0.999456,0.00000665994,0.00007416582,0.000195026,0.00003885195,0.0002292263],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002323109,0.0007342921,0.01330687,0.0004305327,0.0000746915,0.0002083283,0.0002401008,0.000001176653,0.9788501,0.00004822081,0.0007225674,0.003059983],"study_design_scores_gemma":[0.00449958,0.001787432,0.02278703,0.0005776336,0.00005452173,0.0005113049,0.00006649343,0.0001903285,0.9686111,0.0002118181,0.0003400939,0.0003627118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963556,0.00006582157,0.0002347865,0.0009057605,0.00009808056,0.001155177,0.00009534144,0.00003958562,0.001049829],"genre_scores_gemma":[0.9932825,0.0002637244,0.005384366,0.0005353685,0.00007246749,0.00001969546,0.00005700811,0.00002511087,0.0003597783],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01023907,"threshold_uncertainty_score":0.693498,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2781529115","doi":"10.1007/s12602-017-9374-7","title":"Identification and Heterologous Expression of the sec-Dependent Bacteriocin Faerocin MK from Enterococcus faecium M3K31","year":2018,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Bacteriocin; Enterococcus faecium; Heterologous; Biology; Heterologous expression; Operon; Gene; Peptide sequence; Signal peptide; Biochemistry; Plasmid; Microbiology; Genetics; Bacteria; Escherichia coli; Recombinant DNA","authors":[{"name":"Sorina Chiorean","is_ca":true},{"name":"John C. Vederas","is_ca":true},{"name":"Marco J. van Belkum","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008293565083001697,"gpt":0.1896523353313152,"spread":0.1813587702483135,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001312039,0.0001705611,0.0001936982,0.00001258763,0.0003078129,0.000116837,0.0002527936,0.0001490868,0.00003681233],"category_scores_gemma":[0.00001795377,0.00006770078,0.00005921916,0.0001021028,0.0002741732,0.00008968238,0.0003545852,0.0001463277,0.00000404858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001166586,"about_ca_system_score_gemma":0.000006628147,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001443846,"about_ca_topic_score_gemma":0.0002957369,"domain_scores_codex":[0.9989118,0.00006465353,0.0003158819,0.0003680246,0.000112097,0.0002275728],"domain_scores_gemma":[0.999502,0.00002278899,0.0002174584,0.0001140591,0.00007998785,0.00006373149],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004494362,0.0001204883,0.003115513,0.00002128158,0.00001110391,3.89401e-7,0.0001576576,2.834176e-7,0.9915898,0.00001978699,0.00005088855,0.004867835],"study_design_scores_gemma":[0.0002503066,0.0003064172,0.08405022,0.0001287921,0.00001932662,0.000005441085,0.00005876881,0.00006345772,0.9144539,0.0001963431,0.000317399,0.000149616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978263,0.00005477768,0.00006739376,0.00083995,0.0002054286,0.0006130903,0.0003404583,0.00002329186,0.00002929566],"genre_scores_gemma":[0.9991966,0.00007022449,0.0002095886,0.000196188,0.0001784483,0.000004404414,0.00004662759,0.000002499909,0.00009534507],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0809347,"threshold_uncertainty_score":0.2760758,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2803497813","doi":"10.1007/s12602-018-9426-7","title":"Survival of Planktonic and Sessile Cells of Lactobacillus rhamnosus and Lactobacillus reuteri upon Exposure to Simulated Fasting-State Gastrointestinal Conditions","year":2018,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Toronto Metropolitan University","funders":"National Research Foundation","keywords":"Lactobacillus reuteri; Lactobacillus rhamnosus; Microbiology; Biofilm; Gastrointestinal tract; Biology; Probiotic; Lactobacillus; Bacteria; Food science; Biochemistry","authors":[{"name":"Kyle B. Klopper","is_ca":false},{"name":"Elanna Bester","is_ca":false},{"name":"Shelly M. Deane","is_ca":false},{"name":"Gideon Wolfaardt","is_ca":true},{"name":"Leon M. T. Dicks","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01435944858015618,"gpt":0.2195551624458676,"spread":0.2051957138657115,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001979273,0.0002205818,0.0003462072,0.00003660738,0.0002028763,0.00006999335,0.0001254901,0.00008898826,0.00002887712],"category_scores_gemma":[0.00004225222,0.0001174441,0.000043573,0.0002168161,0.0003350752,0.00007507306,0.000227247,0.0001372653,0.000002091788],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001020864,"about_ca_system_score_gemma":0.00001986362,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001258167,"about_ca_topic_score_gemma":0.000277369,"domain_scores_codex":[0.9987619,0.00004868108,0.0003847496,0.0003634128,0.0001089844,0.0003323071],"domain_scores_gemma":[0.9992936,0.00007017767,0.0002049829,0.0000787331,0.0001948036,0.0001577457],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001522475,0.0001256886,0.002434514,0.0001043428,0.00002129403,0.000004174883,0.0001410141,0.00003095609,0.994947,0.00007812537,0.00002364474,0.001937035],"study_design_scores_gemma":[0.001463766,0.009276257,0.06608853,0.001164263,0.00007555232,0.0001376985,0.0002068943,0.001080863,0.9189654,0.0002852685,0.0005375544,0.0007179606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977973,0.00004273111,0.00007822958,0.0003573285,0.00007713009,0.0006013392,0.0009160114,0.0000282139,0.0001016969],"genre_scores_gemma":[0.9986047,0.0000462248,0.001134319,0.0000505911,0.00006098877,0.000001529411,0.00004266108,0.000003626514,0.00005535456],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07598156,"threshold_uncertainty_score":0.478923,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2038750391","doi":"10.1007/s12602-013-9129-z","title":"Partial Characterization of Bacteriocins Produced by Two New Enterococcus faecium Isolated from Human Intestine","year":2013,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Bacteriocin; Listeria monocytogenes; Probiotic; Antimicrobial; Enterococcus faecium; Microbiology; Bacteria; Enterococcus; Biology; Lactic acid; Listeria; Antibiotics","authors":[{"name":"Mélanie Turgis","is_ca":true},{"name":"Khanh Dang Vu","is_ca":true},{"name":"Monique Lacroix","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01035229897953122,"gpt":0.1988279575503397,"spread":0.1884756585708085,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007251238,0.0002291347,0.00028646,0.00001750178,0.0001682718,0.0001649752,0.0002080743,0.00011757,0.0002353226],"category_scores_gemma":[0.00001638362,0.0001128698,0.0000632526,0.0001737592,0.00008848985,0.0001884101,0.0001527253,0.0001575699,0.00001874602],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001309018,"about_ca_system_score_gemma":0.00001269801,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001212814,"about_ca_topic_score_gemma":0.00005485215,"domain_scores_codex":[0.998717,0.00003772201,0.0004366827,0.0004063884,0.00009186594,0.0003103831],"domain_scores_gemma":[0.9993969,0.000013192,0.0002519366,0.00008889555,0.000107455,0.0001416143],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002791524,0.0002172779,0.002152672,0.00001847671,0.00002433772,4.459522e-7,0.00006071243,2.240223e-7,0.9917068,0.0000453106,0.0002216729,0.005524133],"study_design_scores_gemma":[0.0004969187,0.0006014287,0.01734994,0.0001225008,0.00002177682,0.000002126397,0.000008310851,0.0002139398,0.9799736,0.0001423894,0.000799513,0.000267622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965686,0.00001598704,0.0002616722,0.001572861,0.0001012258,0.001093297,0.0003030615,0.00005879315,0.00002445579],"genre_scores_gemma":[0.9982677,0.00002357671,0.0002721914,0.000162928,0.0002325168,0.000009111021,0.0008330356,0.000004196958,0.000194747],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01519726,"threshold_uncertainty_score":0.4602698,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3021823673","doi":"10.1007/s12602-020-09657-4","title":"Biodiversity and Phylogenetic Relationships of Novel Bacteriocinogenic Strains Isolated from Animal’s Droppings at the Zoological Garden of Lille, France","year":2020,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"","keywords":"Bacteriocin; Biology; Microbiology; Salmonella enterica; Escherichia coli; Enterococcus faecalis; Lactobacillus reuteri; 16S ribosomal RNA; Bacilli; Probiotic; Bacteria; Antimicrobial; Gene; Genetics","authors":[{"name":"Mégane Eveno","is_ca":true},{"name":"Amine Salouhi","is_ca":false},{"name":"Yanath Belguesmia","is_ca":false},{"name":"Laurent Bazinet","is_ca":true},{"name":"Frédérique Gancel","is_ca":false},{"name":"Ismaı̈l Fliss","is_ca":true},{"name":"Djamel Drider","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0306434457150909,"gpt":0.1864400186781728,"spread":0.1557965729630819,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001097556,0.000148269,0.0002451893,0.000008155441,0.0002693905,0.00003186808,0.0001829206,0.0001501805,0.00005879167],"category_scores_gemma":[0.00004078104,0.00006400911,0.00006751304,0.0001726536,0.0003574383,0.00003576226,0.0003025907,0.0001838718,0.000002689976],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006396862,"about_ca_system_score_gemma":0.000008774919,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009186709,"about_ca_topic_score_gemma":0.00006256817,"domain_scores_codex":[0.9991159,0.00004672279,0.0002708738,0.0003045953,0.0000831287,0.000178792],"domain_scores_gemma":[0.9995501,0.00005118267,0.0001932553,0.00005574063,0.00006497311,0.00008476639],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008011823,0.00009116587,0.01712244,0.00003396123,0.00003613549,7.539904e-7,0.000233097,0.00000440275,0.9817866,0.00003848098,0.00004909129,0.000523722],"study_design_scores_gemma":[0.001034873,0.002014334,0.7424077,0.0001326283,0.0001194781,0.00001159382,0.0002042121,0.001206521,0.2514974,0.00005881198,0.000882901,0.0004294796],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939787,0.0002601188,0.00004737322,0.004364903,0.00001807465,0.0004728314,0.0008112658,0.00001538117,0.00003137805],"genre_scores_gemma":[0.9989616,0.0001958477,0.0005074195,0.0002175294,0.00003637697,0.000001002436,0.00006036284,0.000001230896,0.00001865466],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7302892,"threshold_uncertainty_score":0.2610216,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2965493539","doi":"10.1007/s12602-019-09574-1","title":"Downregulation of Salmonella Virulence Gene Expression During Invasion of Epithelial Cells Treated with Lactococcus lactis subsp. cremoris JFR1 Requires OppA","year":2019,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virulence; Microbiology; Biology; Lactococcus lactis; Salmonella; Permease; Gene; Enterobacteriaceae; Secretion; Bacteria; Gene expression; Escherichia coli; Biochemistry; Genetics","authors":[{"name":"J. S. Zhang","is_ca":true},{"name":"Milena Corredig","is_ca":true},{"name":"Rocío Morales-Rayas","is_ca":true},{"name":"A. Hassan","is_ca":false},{"name":"Mansel W. Griffiths","is_ca":true},{"name":"Gisèle LaPointe","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01160689196664656,"gpt":0.1944895147546953,"spread":0.1828826227880487,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001933757,0.0002080408,0.0004157233,0.00003019272,0.00009984793,0.0000224744,0.0001665548,0.00018106,0.00006406236],"category_scores_gemma":[0.0000230705,0.00008935665,0.00007567677,0.0002030646,0.0001393777,0.0001312739,0.0001055528,0.0001114838,0.00000615931],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001417875,"about_ca_system_score_gemma":0.00001516893,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003431982,"about_ca_topic_score_gemma":0.00004308541,"domain_scores_codex":[0.9986787,0.0001172578,0.0004138713,0.0003968096,0.0001242877,0.0002690311],"domain_scores_gemma":[0.9992176,0.00008203716,0.0003923067,0.0001160489,0.0001066931,0.00008537414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004595318,0.0001185153,0.02657594,0.0001352153,0.00001390369,0.000002443912,0.00005786786,0.00006319517,0.9715565,0.00001502717,0.00001503904,0.0009868097],"study_design_scores_gemma":[0.0004198767,0.0005400088,0.1136744,0.0002215507,0.00001710282,0.00001159211,0.00002600926,0.0000500667,0.8847847,0.00003078589,0.00004661072,0.0001773236],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986745,0.00004925885,0.00001866569,0.0001158433,0.0000447915,0.0008938619,0.0001058215,0.00002789006,0.00006933296],"genre_scores_gemma":[0.9987727,0.0001826813,0.000784566,0.00002297076,0.00007526945,0.000004787926,0.0000412795,0.000003685728,0.0001120069],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08709841,"threshold_uncertainty_score":0.3643859,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1966941926","doi":"10.1007/s12602-013-9130-6","title":"Antibacterial Activity of Probiotic Lactobacillus plantarum HK01: Effect of Divalent Metal Cations and Food Additives on Production Efficiency of Antibacterial Compounds","year":2013,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Lactobacillus plantarum; Probiotic; Antibacterial activity; Food science; Strain (injury); Bacteria; Chemistry; Microbiology; Lactic acid; Escherichia coli; Lactobacillus; Biology; Fermentation; Biochemistry; Gene","authors":[{"name":"Hakimeh Sharafi","is_ca":false},{"name":"Leila Alidost","is_ca":false},{"name":"Abdolmajid Lababpour","is_ca":false},{"name":"Hossein Shahbani Zahiri","is_ca":false},{"name":"Habib Abbasi","is_ca":false},{"name":"Hojatollah Vali","is_ca":true},{"name":"Kambiz Akbari Noghabi","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01021758195447503,"gpt":0.1963528004616612,"spread":0.1861352185071862,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002566174,0.0002687638,0.000560092,0.00005657291,0.000162498,0.0000496033,0.0001570511,0.0001487484,0.00003125188],"category_scores_gemma":[0.00006900264,0.0001293044,0.0001074012,0.000226912,0.0004331256,0.000166885,0.0001469559,0.0001499584,0.000001338008],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001443611,"about_ca_system_score_gemma":0.00002024445,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001556677,"about_ca_topic_score_gemma":0.00004244886,"domain_scores_codex":[0.9985954,0.0001280742,0.00043264,0.0004025063,0.0001572561,0.000284091],"domain_scores_gemma":[0.9991615,0.00008977471,0.0004262959,0.0001077955,0.0001387818,0.00007581704],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003367474,0.0006343324,0.001262469,0.0004773519,0.00007454833,2.124617e-7,0.00009096611,0.000003033658,0.9945531,0.0001353094,0.0000192811,0.002412599],"study_design_scores_gemma":[0.0005693692,0.006576986,0.04366481,0.0003062158,0.00006509487,0.00001031873,0.00001762973,0.00003936003,0.9484818,0.00003814093,0.00002265288,0.0002076047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966928,0.00002910874,0.00000826386,0.0002798047,0.000255093,0.001884312,0.0007498669,0.00002092714,0.00007987408],"genre_scores_gemma":[0.9995329,0.00007938244,0.0001317152,0.000006723529,0.0001136181,0.000008921701,0.0001077717,0.000003903989,0.00001506755],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04607133,"threshold_uncertainty_score":0.527288,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2141239925","doi":"10.1007/s12602-009-9023-x","title":"Heterologous Processing and Export of the Bacteriocins Pediocin PA-1 and Lactococcin A in Lactococcus Lactis: A Study with Leader Exchange","year":2009,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval","funders":"","keywords":"Bacteriocin; Lactococcus lactis; Biochemistry; Biology; Cleavage (geology); Heterologous; Bacteria; Genetics; Gene","authors":[{"name":"Michael L. Chikindas","is_ca":false},{"name":"Éric Émond","is_ca":true},{"name":"A J Haandrikman","is_ca":false},{"name":"Jan Kok","is_ca":false},{"name":"Kees Leenhouts","is_ca":false},{"name":"Shunmugiah Karutha Pandian","is_ca":true},{"name":"G Venema","is_ca":false},{"name":"Koen Venema","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01195548686449974,"gpt":0.2054191378227936,"spread":0.1934636509582938,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002078132,0.0002076037,0.0002894,0.00002610169,0.0001800918,0.0001055422,0.0001243641,0.0001061764,0.000008091182],"category_scores_gemma":[0.00001221144,0.00007833461,0.00002671328,0.000225411,0.0001550499,0.0001187382,0.0001160399,0.0002192746,1.640685e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001084479,"about_ca_system_score_gemma":0.00001777289,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000663632,"about_ca_topic_score_gemma":0.001043444,"domain_scores_codex":[0.9989447,0.00005645708,0.0002546531,0.0003593806,0.00009742193,0.0002873777],"domain_scores_gemma":[0.9996424,0.00001602216,0.0001535329,0.00006905785,0.00004103726,0.00007789557],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000300694,0.000920262,0.1033797,0.0001895812,0.00002175067,0.00001550553,0.00173806,8.879967e-7,0.8632154,0.00002064743,0.00001836378,0.03017917],"study_design_scores_gemma":[0.001168392,0.003688813,0.9742445,0.0003142078,0.00003520674,0.00005662628,0.0005852235,0.00005797154,0.01926801,0.00005983838,0.0002104272,0.0003107693],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965222,0.0001473572,0.000003074837,0.001257903,0.00001572496,0.00195094,0.000024694,0.00001869541,0.00005936668],"genre_scores_gemma":[0.9994563,0.00005187085,0.0001258622,0.000256654,0.00004055323,0.00001354399,0.000004007122,0.000002512444,0.00004872317],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8708648,"threshold_uncertainty_score":0.3194393,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4396832462","doi":"10.1007/s12602-024-10270-y","title":"Screening of Lactic Acid Bacteria Strains for Potential Sourdough and Bread Applications: Enzyme Expression and Exopolysaccharide Production","year":2024,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; McGill University","funders":"","keywords":"Lactococcus lactis; Lactic acid; Lactobacillus plantarum; Bacteria; Xylanase; Biology; Enzyme; Microbiology; Biochemistry; Lactobacillus; Lactobacillus rhamnosus; Chemistry; Genetics","authors":[{"name":"YiNing Dong","is_ca":true},{"name":"Jennifer Ronholm","is_ca":true},{"name":"Ismaı̈l Fliss","is_ca":true},{"name":"Salwa Karboune","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009440891650293682,"gpt":0.237979441656033,"spread":0.2285385500057394,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001431844,0.0001361578,0.0001242866,0.00006449493,0.0001335953,0.00009920076,0.00004162069,0.0001141927,0.000003255356],"category_scores_gemma":[0.00002246453,0.00012922,0.00003299537,0.00006613199,0.0001109694,0.00002667206,0.00007377642,0.00007250885,2.829382e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003526829,"about_ca_system_score_gemma":0.00002856436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004425044,"about_ca_topic_score_gemma":0.000002571487,"domain_scores_codex":[0.9991751,0.0000218742,0.0002026205,0.0004187424,0.0000463555,0.0001352902],"domain_scores_gemma":[0.9996715,0.000003030443,0.00008469994,0.0001259873,0.00006901366,0.00004576083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008082901,0.00003921736,0.00002733871,0.0006307536,0.0000264333,2.433607e-7,0.00007198705,0.00000398127,0.9904764,0.0001293466,0.0001627663,0.00835074],"study_design_scores_gemma":[0.0002624566,0.0001526188,0.0001728861,0.0001457805,0.00003734593,0.0000606369,0.00003814328,0.0001877205,0.9943171,0.00005702629,0.004417027,0.0001513245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8400757,0.002376138,0.153997,0.001418193,0.0002900186,0.00162721,0.0001583854,0.00004651298,0.00001081938],"genre_scores_gemma":[0.985064,0.001072523,0.01280442,0.00004163475,0.0005620696,0.0000499141,0.000183513,0.00002581163,0.000196139],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1449883,"threshold_uncertainty_score":0.5269439,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2040830391","doi":"10.1007/s12602-011-9067-6","title":"Cyclic Tritrpticin Analogs with Distinct Biological Activities","year":2011,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research","keywords":"Peptide; Cathelicidin; Antimicrobial; Antimicrobial peptides; Chemistry; Lipid bilayer; Membrane; Biochemistry; Cyclic peptide; Bilayer; Biological activity; Amphiphile; Biophysics; Biology; Stereochemistry; Computational biology; In vitro","authors":[{"name":"Leonard T. Nguyen","is_ca":true},{"name":"Johnny Chau","is_ca":true},{"name":"Sebastian A. J. Zaat","is_ca":false},{"name":"Hans J. Vogel","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02595750420378092,"gpt":0.2073036149570505,"spread":0.1813461107532696,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000168568,0.000410192,0.000528882,0.0001341095,0.000449866,0.00006678061,0.0002318304,0.0003106136,0.0002942848],"category_scores_gemma":[0.0000255945,0.0002905618,0.0001107956,0.0001620438,0.001170316,0.0002054688,0.0001837418,0.0004430293,0.00007723836],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002263085,"about_ca_system_score_gemma":0.00005850363,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002927183,"about_ca_topic_score_gemma":0.0001000907,"domain_scores_codex":[0.9983122,0.0001146206,0.0003369163,0.0005548749,0.00003502829,0.0006464006],"domain_scores_gemma":[0.9993919,0.00005259957,0.000186098,0.0002611734,0.00005282909,0.00005547428],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007769616,0.0005684368,0.006834939,0.000116977,0.0002291925,0.00003240461,0.0008201215,8.22909e-7,0.9839468,0.003228567,0.0008832671,0.002561518],"study_design_scores_gemma":[0.002359057,0.001894081,0.01547019,0.0002866078,0.0001195127,0.0005126584,0.0004917146,0.000003839625,0.9741219,0.0004059158,0.003371291,0.0009632611],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941188,0.0002512783,0.001131208,0.0002031503,0.0001885393,0.0007477805,0.0001175108,0.0001777064,0.003064036],"genre_scores_gemma":[0.9952435,0.0001426089,0.002998089,0.0002290721,0.00005791836,0.00001682051,0.00005931383,0.00003964997,0.001212972],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009824925,"threshold_uncertainty_score":0.9999546,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4281483465","doi":"10.1007/s12602-022-09928-2","title":"Assessing the Activity of Antimicrobial Peptides Against Common Marine Bacteria Located in Rotifer (Brachionus plicatilis) Cultures","year":2022,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"Murdoch University; Department of Primary Industries and Regional Development, Government of Western Australia; Fisheries Research and Development Corporation","keywords":"Brachionus; Rotifer; Biology; Antimicrobial; Microbiology; Bacteria; Zoology; Ecology; Genetics","authors":[{"name":"Chelsea L. Woods","is_ca":false},{"name":"Lindsey Woolley","is_ca":false},{"name":"Gavin J. Partridge","is_ca":false},{"name":"Mengqi Chen","is_ca":false},{"name":"Evan F. Haney","is_ca":true},{"name":"Robert E. W. Hancock","is_ca":true},{"name":"Nicky Buller","is_ca":false},{"name":"Andrew Currie","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01359427758242912,"gpt":0.2527204437708699,"spread":0.2391261661884408,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005844494,0.0004363979,0.0007092037,0.0002063344,0.001018157,0.0001703309,0.0005456196,0.000217828,0.000143647],"category_scores_gemma":[0.00004424268,0.0003505718,0.0001796504,0.0003878425,0.0006845103,0.0003744098,0.001204966,0.001071513,0.000009022571],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008537813,"about_ca_system_score_gemma":0.0001360771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001168212,"about_ca_topic_score_gemma":0.0003256882,"domain_scores_codex":[0.9975051,0.0005294585,0.0006549972,0.0006010979,0.00008110428,0.0006282468],"domain_scores_gemma":[0.9988024,0.0001167752,0.000503692,0.0004566847,0.00008595386,0.00003448024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000274017,0.0007377325,0.005321445,0.0002226004,0.000107097,0.000009345155,0.0005333325,0.0003346674,0.9865933,0.0003183836,0.0009112373,0.004636848],"study_design_scores_gemma":[0.001921674,0.0002548891,0.03628747,0.0002397953,0.000071421,0.0001916992,0.0006479101,0.0001368368,0.9570483,0.00007663503,0.002456115,0.0006672817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961634,0.0001118126,0.00008220792,0.001175954,0.0003484584,0.001329261,0.0002888229,0.00007032206,0.0004297538],"genre_scores_gemma":[0.9981344,0.0001494377,0.0004466352,0.0003963906,0.00005040058,0.00004094959,0.0002665216,0.00005248489,0.0004627886],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03096603,"threshold_uncertainty_score":0.9998946,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4402455494","doi":"10.1007/s12602-024-10350-z","title":"Microalgal and Cyanobacterial Biomasses Modified the Activity of Extracellular Products from Bacillus pumilus: An In Vitro and In Vivo Assessment","year":2024,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Aquaculture Nutrition and Growth","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Agencia Estatal de Investigación; Canadian Academy of Sport and Exercise Medicine; Junta de Andalucía; European Commission; Ministerio de Ciencia e Innovación; European Regional Development Fund; Universidad de Málaga","keywords":"Bacillus pumilus; In vivo; Biology; Food science; Microbiology; In vitro toxicology; In vitro; Biochemistry; Bacteria; Biotechnology","authors":[{"name":"Jorge García‐Márquez","is_ca":false},{"name":"Alba Galafat Díaz","is_ca":false},{"name":"Luis Molina-Roque","is_ca":false},{"name":"Marta Domínguez‐Maqueda","is_ca":false},{"name":"Verónica de las Heras","is_ca":false},{"name":"Paula Simó‐Mirabet","is_ca":false},{"name":"Antonio Jesús Vizcaíno","is_ca":false},{"name":"Juan António Martos-Sitcha","is_ca":false},{"name":"Francisco Javier Alarcón‐López","is_ca":false},{"name":"Miguel Ángel Moríñigo","is_ca":false},{"name":"M. Carmen Balebona","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01607442443911926,"gpt":0.2231618974162456,"spread":0.2070874729771264,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002337906,0.0001588238,0.0002164298,0.00002673783,0.00008981592,0.0001995955,0.00008972907,0.0001151284,0.00001109988],"category_scores_gemma":[0.00001482101,0.00006491177,0.00002466307,0.0002125712,0.0001776932,0.0001817942,0.00009036569,0.0001686297,2.861712e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001450934,"about_ca_system_score_gemma":0.00001824938,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006795342,"about_ca_topic_score_gemma":0.000713136,"domain_scores_codex":[0.9990315,0.0001062231,0.0002075364,0.0003931305,0.00007562698,0.0001859713],"domain_scores_gemma":[0.9997709,0.00004961585,0.0000540215,0.00005041833,0.00002744143,0.000047581],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001279629,0.000190423,0.000399823,0.0001023251,0.000008615983,0.00000814575,0.0001689336,4.786021e-7,0.9940229,0.0001003075,0.00001189628,0.004858153],"study_design_scores_gemma":[0.0003411047,0.0001484077,0.02148163,0.000135642,0.00001156008,0.00001006465,0.00007053489,0.0004784019,0.9762773,0.0002326745,0.0006429743,0.0001697022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958311,0.0003925773,0.00001191174,0.002689154,0.00005492961,0.0006818604,0.0002989288,0.00001970465,0.00001978736],"genre_scores_gemma":[0.9989631,0.0002249363,0.0005805314,0.00003300404,0.000124097,0.000008229416,0.00004342913,0.000002082769,0.00002057813],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02108181,"threshold_uncertainty_score":0.2647025,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4226025234","doi":"10.1007/s12602-022-09936-2","title":"Modulation of Virulence Gene Expression in Salmonella enterica subsp. enterica typhimurium by Synthetic Milk-Derived Peptides","year":2022,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Salmonella enterica; Virulence; Salmonella; Biology; Microbiology; Gene; Gene expression; Genetics; Bacteria","authors":[{"name":"Eman Ali","is_ca":false},{"name":"Gisèle LaPointe","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01155810216575344,"gpt":0.198047295113733,"spread":0.1864891929479796,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002625629,0.0001735467,0.0003068819,0.00002806013,0.0001951571,0.00002260686,0.0002277624,0.00007726913,0.0001016766],"category_scores_gemma":[0.00002864783,0.00009254891,0.00007217908,0.0002173802,0.0001160556,0.00006108708,0.0002816246,0.0001649861,0.00000268646],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002832177,"about_ca_system_score_gemma":0.000007875293,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001759993,"about_ca_topic_score_gemma":0.00001985636,"domain_scores_codex":[0.998549,0.0002387555,0.0003934633,0.0004085769,0.0001134475,0.000296698],"domain_scores_gemma":[0.9995444,0.00006771661,0.0002160948,0.00008107463,0.00003159044,0.00005906903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001196521,0.0002394523,0.007393792,0.00002754887,0.000005358342,0.000003399568,0.0001099774,0.00007849507,0.9899577,0.000007271752,0.0001890064,0.001868319],"study_design_scores_gemma":[0.0003848669,0.0006870224,0.04542154,0.00009208015,0.00001138619,0.00003643482,0.000136238,0.0007761888,0.9506472,0.0002083574,0.00125102,0.0003476813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982601,0.0002209582,0.00009053056,0.0006203076,0.00008685899,0.000494315,0.0001640367,0.00002532247,0.0000375893],"genre_scores_gemma":[0.9986727,0.0002251747,0.000703318,0.0001656986,0.00004122704,0.00002514556,0.0001136917,0.000002994327,0.0000499995],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03931054,"threshold_uncertainty_score":0.3774035,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3047538389","doi":"10.1007/s12602-020-09692-1","title":"The Effect of Antimicrobial Peptides on the Viability of Human Corneal Epithelial Cells","year":2020,"lang":"en","type":"article","venue":"Probiotics and Antimicrobial Proteins","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Waterloo","funders":"","keywords":"Antimicrobial; Antimicrobial peptides; Microbiology; Bacteria; Pseudomonas aeruginosa; Polymyxin; Polymyxin B; Staphylococcus aureus; Minimum inhibitory concentration; Antibiotics; Nisin; Biology; Chemistry","authors":[{"name":"Ezgi Ulkuseven","is_ca":true},{"name":"David J. McCanna","is_ca":true},{"name":"Lakshman N. Subbaraman","is_ca":true},{"name":"Lyndon Jones","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01128473406046747,"gpt":0.2157270135555217,"spread":0.2044422794950542,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006658971,0.0004013708,0.0006946292,0.00004616766,0.0008095676,0.00006604235,0.0005442072,0.0002501475,0.00004248537],"category_scores_gemma":[0.0001694465,0.0002263001,0.0003039488,0.0001814045,0.002127875,0.00007733719,0.0003171378,0.0005849875,0.00003891488],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000159334,"about_ca_system_score_gemma":0.00005780102,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001405306,"about_ca_topic_score_gemma":0.00002029348,"domain_scores_codex":[0.9978117,0.0004693045,0.0006902274,0.0004589798,0.00007261665,0.0004972116],"domain_scores_gemma":[0.9983612,0.000582146,0.0004975055,0.0004057057,0.0001086806,0.00004472432],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008199482,0.0001197291,0.0003679597,0.0003865423,0.0001589169,0.000001546904,0.0003913034,0.00002516335,0.9915658,0.001902777,0.003606149,0.0006541819],"study_design_scores_gemma":[0.001133995,0.002086302,0.0002608526,0.000155273,0.00008317777,0.00001025647,0.00007209177,0.00001349628,0.9947084,0.00005110231,0.001179132,0.0002459906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946448,0.00008431559,0.00007484426,0.002563418,0.0002945968,0.001620899,0.0003867311,0.00004404117,0.0002864189],"genre_scores_gemma":[0.9991265,0.00008191341,0.00007928474,0.0003368183,0.00010635,0.000009463361,0.00002329494,0.00003678058,0.0001995908],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004481768,"threshold_uncertainty_score":0.922825,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}