{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":25,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":25,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"2c752f301a61","filters":{"venue":"The Brazilian Journal of Infectious Diseases"}},"results":[{"id":"W3020225637","doi":"10.1016/j.bjid.2020.03.002","title":"Mobile genetic elements associated with carbapenemase genes in South American Enterobacterales","year":2020,"lang":"en","type":"review","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Public Health Ontario; University of Toronto; Toronto Public Health","funders":"Universidad San Francisco de Quito","keywords":"Klebsiella pneumoniae; Mobile genetic elements; Plasmid; Biology; Transposable element; Microbiology; Gene; Genome; Genetics; Escherichia coli","authors":[{"name":"Jorge Reyes","is_ca":false},{"name":"Roberto G. Melano","is_ca":true},{"name":"Paúl Cárdenas","is_ca":false},{"name":"Gabriel Trueba","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.008469795958676819,"gpt":0.2685116626862982,"spread":0.2600418667276214,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001443403,0.0004450294,0.00120655,0.0001267844,0.00007499507,0.00008187909,0.000550208,0.0001069047,0.00002197505],"category_scores_gemma":[0.0001897844,0.0002768174,0.000495878,0.0003198403,0.0002985736,0.000008093574,0.0001066182,0.0002735445,0.000006912369],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001094096,"about_ca_system_score_gemma":0.0005305361,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005274806,"about_ca_topic_score_gemma":0.00006922339,"domain_scores_codex":[0.9977034,0.000521467,0.0008827264,0.0003233644,0.0002481993,0.0003208391],"domain_scores_gemma":[0.9975465,0.00005465561,0.001697788,0.0003799348,0.0001299637,0.0001911438],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004177231,0.0006982961,0.3207654,0.002344065,0.003426569,0.0006689464,0.0003002022,0.0001015026,0.0001791966,0.000001824817,0.000631427,0.6704648],"study_design_scores_gemma":[0.003670643,0.008307382,0.05785706,0.01852985,0.006067463,0.0009793321,0.0006251491,0.000006128616,0.00009171993,0.00003317312,0.9018037,0.002028358],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.2431538,0.7560852,0.00002720796,0.000005126874,0.0001288869,0.000431112,0.0001361992,0.000008312565,0.0000241226],"genre_scores_gemma":[0.1425731,0.8567514,0.00004440795,0.00006485577,0.0003323766,0.00002395451,0.00008990445,0.00007417068,0.00004574592],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9011723,"threshold_uncertainty_score":0.9999684,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2604897772","doi":"10.1016/j.bjid.2017.03.006","title":"Resistance among Gram-negative ESKAPE pathogens isolated from hospitalized patients with intra-abdominal and urinary tract infections in Latin American countries: SMART 2013–2015","year":2017,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Manitoba Health; University of Manitoba","funders":"","keywords":"Acinetobacter baumannii; Antimicrobial; Microbiology; Pseudomonas aeruginosa; Klebsiella pneumoniae; Medicine; Imipenem; Broth microdilution; Antibiotic resistance; Piperacillin; Acinetobacter; Enterobacter; Antibiotics; Biology; Minimum inhibitory concentration; Bacteria; Escherichia coli","authors":[{"name":"James A. Karlowsky","is_ca":true},{"name":"Daryl J. Hoban","is_ca":true},{"name":"Meredith Hackel","is_ca":false},{"name":"Sibylle Lob","is_ca":false},{"name":"Daniel F. Sahm","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.003153684178324941,"gpt":0.227463855304983,"spread":0.2243101711266581,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000155242,0.000240189,0.0003614402,0.00007389725,0.0003953492,0.0001727839,0.0002860736,0.00007311019,0.00002310149],"category_scores_gemma":[0.0004721735,0.0001686389,0.0001033976,0.00009354267,0.001068383,0.00006141463,0.0000682201,0.0002035094,0.000001937191],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004985437,"about_ca_system_score_gemma":0.0001448127,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003119265,"about_ca_topic_score_gemma":0.001501374,"domain_scores_codex":[0.9987088,0.0001887707,0.0004076536,0.0002550184,0.0001949516,0.0002447476],"domain_scores_gemma":[0.9979864,0.0001025736,0.001003737,0.0004581749,0.0002897984,0.0001593296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001499258,0.0005419876,0.9965829,0.00001184853,0.000170243,0.00004539146,0.0001630999,0.00001448239,0.0002826322,0.000003857469,0.0003642282,0.0003200362],"study_design_scores_gemma":[0.002269581,0.001695744,0.9946396,0.0001753995,0.0001362792,0.00001975947,0.0001611816,0.000009632486,0.0001442144,0.0002856707,0.0002431518,0.0002198217],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985499,0.0003410915,0.0001368727,0.0002390189,0.0001655596,0.0002689534,0.0001849432,0.000008745959,0.0001049243],"genre_scores_gemma":[0.9990665,0.0004984844,0.0001360195,0.00005984173,0.0001274499,0.000006398913,0.00002389115,0.00002889788,0.00005255491],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00194337,"threshold_uncertainty_score":0.6876894,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1973872155","doi":"10.1016/s1413-8670(11)70144-1","title":"Bedbugs (Cimicidae infestation): the worldwide renaissance of an old partner of human kind","year":2011,"lang":"en","type":"review","venue":"The Brazilian Journal of Infectious Diseases","topic":"Dermatological diseases and infestations","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Cimex lectularius; Infestation; Zoology; Biology","authors":[{"name":"Paulo Ricardo Criado","is_ca":false},{"name":"Walter Belda","is_ca":false},{"name":"Roberta Fachini Jardim Criado","is_ca":false},{"name":"Roberta Vasconcelos e Silva","is_ca":false},{"name":"Cí­dia Vasconcellos","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04351269344985363,"gpt":0.3558689729734971,"spread":0.3123562795236435,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003794667,0.0003981893,0.001756281,0.0003124011,0.000227082,0.00003635306,0.0005600568,0.0001380226,0.0005366122],"category_scores_gemma":[0.0006724742,0.0001932139,0.001246066,0.0005629529,0.0008277245,0.0002563223,0.00006681257,0.0005557407,0.00001890295],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005486835,"about_ca_system_score_gemma":0.0005711108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003983636,"about_ca_topic_score_gemma":0.00001811508,"domain_scores_codex":[0.9967126,0.0005713736,0.001789371,0.0002081608,0.0004430124,0.0002755207],"domain_scores_gemma":[0.9948249,0.0005720998,0.002832416,0.0007604613,0.0006643067,0.000345825],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004577519,0.005565722,0.01987069,0.02355119,0.003660027,0.0003287503,0.001204654,0.00006767251,0.00001806156,0.01499193,0.01337108,0.9169125],"study_design_scores_gemma":[0.005002134,0.005846696,0.1773633,0.0515861,0.03751653,0.004461832,0.0006894324,0.00001884712,0.00007088141,0.01867189,0.6973732,0.001399148],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.01793895,0.9769474,0.00003263436,0.0001499214,0.0002496898,0.0009406511,0.0002232373,0.00003284909,0.003484712],"genre_scores_gemma":[0.1624073,0.8365404,0.00003008881,0.0003193791,0.0002793275,0.00003889972,0.00008166034,0.00006276787,0.0002401581],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9155133,"threshold_uncertainty_score":0.7879035,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3159435737","doi":"10.1016/s1413-8670(11)70247-1","title":"Perinatal morbidity and mortality associated with chlamydial infection: a meta-analysis study","year":2011,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Medicine; Relative risk; Obstetrics; Endometritis; Cervicitis; Meta-analysis; Abortion; Chlamydia; Pregnancy; Confidence interval; Chlamydia trachomatis; Gynecology; Internal medicine; Immunology; Biology","authors":[{"name":"Maria José Penna Maisonnette de Attayde Silva","is_ca":false},{"name":"Gilzandra Lira Dantas Florêncio","is_ca":false},{"name":"José Roberto Erbolato Gabiatti","is_ca":false},{"name":"Rose Luce Gomes do Amaral","is_ca":false},{"name":"José Eleutério","is_ca":false},{"name":"Ana Katherine Gonçalves","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06995147448362282,"gpt":0.3197372752697469,"spread":0.2497858007861241,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001213046,0.0002411309,0.0008283724,0.0004087581,0.0005112399,0.00005510404,0.000211903,0.00008145313,0.00179031],"category_scores_gemma":[0.0007414821,0.0001352081,0.0006931445,0.0009072393,0.0006688176,0.0003621059,0.00008289719,0.0005736004,0.00002295696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007495943,"about_ca_system_score_gemma":0.0001423861,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001002275,"about_ca_topic_score_gemma":0.001204286,"domain_scores_codex":[0.9975178,0.001281006,0.0004638702,0.0002924601,0.000166249,0.0002786242],"domain_scores_gemma":[0.9980292,0.0003030087,0.0004900276,0.0004736184,0.0006252038,0.00007893326],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002303828,0.001740711,0.8388317,0.000005478669,0.1579228,0.00004679896,0.0007839609,0.00005586267,0.0001259044,0.00003578251,0.00006438685,0.0001562513],"study_design_scores_gemma":[0.001006143,0.001619539,0.9070973,0.000002464629,0.0888847,0.0003411658,0.0002290396,9.556392e-7,0.0004331177,0.0002057563,0.00004111894,0.000138663],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971387,0.001328778,0.0001067478,0.00004348108,0.0002229362,0.0004020868,0.0000445115,0.00005100548,0.0006617072],"genre_scores_gemma":[0.9996136,0.00004242938,0.000002727359,0.00002105392,0.00005647702,0.00003675896,0.000005516657,0.00001626311,0.0002051566],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06903813,"threshold_uncertainty_score":0.9991222,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3201291823","doi":"10.1016/j.bjid.2021.101620","title":"Characteristics and outcomes of pregnant women with SARS-CoV-2 infection and other severe acute respiratory infections (SARI) in Brazil from January to November 2020","year":2021,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"COVID-19 Impact on Reproduction","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario; McGill University; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Medicine; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); Respiratory system; 2019-20 coronavirus outbreak; Betacoronavirus; Respiratory infection; Virology; Obstetrics; Intensive care medicine; Internal medicine; Outbreak; Infectious disease (medical specialty); Disease","authors":[{"name":"Lisiane Freitas Leal","is_ca":true},{"name":"Joanna Merckx","is_ca":true},{"name":"Deshayne B. Fell","is_ca":true},{"name":"Ricardo Kuchenbecker","is_ca":false},{"name":"Angélica Espinosa Miranda","is_ca":false},{"name":"Wanderson Kleber de Oliveira","is_ca":false},{"name":"Robert W. Platt","is_ca":true},{"name":"Lívia de Oliveira Antunes","is_ca":false},{"name":"Mariângela Freitas da Silveira","is_ca":false},{"name":"Natália Bordin Barbieri","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01323176018646583,"gpt":0.3031391008758877,"spread":0.2899073406894219,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000275609,0.0002270703,0.0005929854,0.0002749511,0.00009999132,0.00005586282,0.00005479273,0.00007415791,0.00005024021],"category_scores_gemma":[0.0008232582,0.000154662,0.00008627769,0.0005188874,0.0001640079,0.0002735526,0.00007063084,0.000317341,0.000003295343],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002139851,"about_ca_system_score_gemma":0.0004378966,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001927055,"about_ca_topic_score_gemma":0.0003164331,"domain_scores_codex":[0.9984944,0.0001754689,0.0005486596,0.0002667788,0.000290802,0.0002238417],"domain_scores_gemma":[0.9984834,0.0002202706,0.0004056899,0.0003651693,0.0003145147,0.0002109769],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000761439,0.0005950329,0.9782237,0.000105217,0.0005692298,0.0001219646,0.001128293,0.0000377118,0.01295363,0.000007675186,0.0003468262,0.005149302],"study_design_scores_gemma":[0.00253334,0.001316042,0.990122,0.0004525347,0.0004814279,0.0007809009,0.0001166134,0.000007524882,0.002523564,0.0002402527,0.001260539,0.0001653133],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972945,0.0003736642,0.0001221419,0.00140248,0.000219529,0.0003539314,0.0001060249,0.00002748332,0.0001001819],"genre_scores_gemma":[0.996223,0.0002269034,0.00003275005,0.003216227,0.0002033078,0.0000157724,0.000003275691,0.00003286685,0.00004585845],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01189827,"threshold_uncertainty_score":0.6306934,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2167520815","doi":"10.1590/s1413-86702008000300007","title":"Indications of a new antibiotic in clinical practice: results of the tigecycline initial use registry","year":2008,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Tigecycline; Medicine; Colistin; Intensive care medicine; Antibiotics; Acinetobacter; Medical prescription; Pneumonia; Multiple drug resistance; Internal medicine; Pharmacology; Microbiology","authors":[{"name":"Daniel Curcio","is_ca":false},{"name":"F. FERNÁNDEZ","is_ca":false},{"name":"Alejandro Cané","is_ca":true},{"name":"Laura Barcelona","is_ca":false},{"name":"Daniel Stamboulián","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02264748179933624,"gpt":0.3341513848633306,"spread":0.3115039030639944,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0004846328,0.0001126631,0.0002687038,0.00005943896,0.00007438825,0.00001233267,0.0004061286,0.0001078988,0.000006697423],"category_scores_gemma":[0.008365402,0.00007022523,0.0002620567,0.0002329093,0.0006321271,0.00002484091,0.00008276216,0.0002294837,0.000001207238],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001563051,"about_ca_system_score_gemma":0.000774318,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005450919,"about_ca_topic_score_gemma":0.00004693775,"domain_scores_codex":[0.9980549,0.000371271,0.001075451,0.0001387231,0.0002285981,0.0001310363],"domain_scores_gemma":[0.9971834,0.0003018582,0.001593282,0.0005512024,0.0002748316,0.00009542012],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001908482,0.0009837765,0.9758328,0.00003262845,0.0002212073,0.0000445488,0.0001944308,0.0001370909,0.009575889,0.00005390622,0.009940582,0.001074627],"study_design_scores_gemma":[0.00182816,0.000448511,0.9872039,0.0001623854,0.0001200633,0.0004574255,0.0001180248,0.000002524522,0.007746995,0.0001134007,0.001715036,0.0000835594],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979949,0.0004993603,0.0001065351,0.0005457755,0.0002897211,0.0001408627,0.00005515427,0.00000256714,0.0003651167],"genre_scores_gemma":[0.9982686,0.0008204237,0.0002384226,0.0001405442,0.0003446983,2.341632e-7,0.000007851374,0.00001256005,0.0001666833],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01137108,"threshold_uncertainty_score":0.9999875,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3212384348","doi":"10.1016/j.bjid.2021.101647","title":"In vitro activity of ceftazidime-avibactam against Enterobacterales and Pseudomonas aeruginosa isolates collected in Latin America as part of the ATLAS global surveillance program, 2017–2019","year":2021,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"Pfizer","keywords":"Ceftazidime/avibactam; Meropenem; Ceftazidime; Microbiology; Broth microdilution; Pseudomonas aeruginosa; Avibactam; Biology; Medicine; Antimicrobial; Antibiotic resistance; Bacteria; Minimum inhibitory concentration; Antibiotics","authors":[{"name":"James A. Karlowsky","is_ca":true},{"name":"Krystyna M. Kazmierczak","is_ca":false},{"name":"Maria Lavínea Novis de Figueiredo Valente","is_ca":false},{"name":"Elkin Lemos","is_ca":false},{"name":"Monique Baudrit","is_ca":false},{"name":"Alvaro Quintana","is_ca":false},{"name":"Paurus Irani","is_ca":false},{"name":"Gregory G. Stone","is_ca":false},{"name":"Daniel F. Sahm","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.004427332928601922,"gpt":0.242129728050238,"spread":0.237702395121636,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001399828,0.0001697614,0.0003771244,0.00004032714,0.00005230185,0.00003020159,0.000225391,0.00007570765,0.000009915511],"category_scores_gemma":[0.0004070822,0.0001159931,0.0001737581,0.0003622755,0.0003657964,0.00002015648,0.0001153022,0.0001375445,5.248856e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004100016,"about_ca_system_score_gemma":0.0002983784,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006984297,"about_ca_topic_score_gemma":0.0003860925,"domain_scores_codex":[0.9985684,0.000432735,0.0004587427,0.0001857325,0.0001465673,0.0002077818],"domain_scores_gemma":[0.9987382,0.00008889807,0.0006016896,0.0003022318,0.0002001068,0.00006887178],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000801546,0.0004944878,0.6482695,0.00004720846,0.000107529,0.00002246078,0.00005015675,0.00004432107,0.3475535,0.000002945968,0.0004502705,0.00215599],"study_design_scores_gemma":[0.001109173,0.000296183,0.8955511,0.0001610623,0.0000301379,0.0001190714,0.00007299078,0.00001540934,0.10191,0.00009154872,0.0005185845,0.0001247569],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978514,0.001222994,0.000007187613,0.0002511914,0.0001773374,0.0002171901,0.0001160055,0.000003770512,0.0001528984],"genre_scores_gemma":[0.9985903,0.00114889,0.00006352322,0.00006721997,0.00005848446,0.000002895934,0.00001246517,0.00001059489,0.00004561471],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2472815,"threshold_uncertainty_score":0.4730063,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2104932075","doi":"10.1590/s1413-86702002000400004","title":"Tattoos and transfusion-transmitted disease risk: implications for the screening of blood donors in Brazil","year":2002,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Tattoo and Body Piercing Complications","field":"Social Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Montreal General Hospital; McGill University","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Blood transfusion; Medicine; Disease; Virology; Intensive care medicine; Immunology; Internal medicine","authors":[{"name":"Sérgio de Andrade Nishioka","is_ca":true},{"name":"Theresa W. Gyorkos","is_ca":true},{"name":"J. Dick MacLean","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01864456159487847,"gpt":0.2892753062760836,"spread":0.2706307446812051,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005507165,0.0001074904,0.0001853912,0.0001943172,0.00112478,0.0000722655,0.0003550336,0.00003305894,0.00006097339],"category_scores_gemma":[0.0007104792,0.00006804559,0.000208564,0.0006537252,0.0005788091,0.0002095321,0.00001402869,0.0001753089,8.900431e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001515962,"about_ca_system_score_gemma":0.00009628382,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005138883,"about_ca_topic_score_gemma":0.001294942,"domain_scores_codex":[0.9988164,0.0002442413,0.0004102391,0.0001268599,0.0001890263,0.0002132845],"domain_scores_gemma":[0.9973731,0.001661718,0.0003197428,0.0002276124,0.0002131246,0.0002047034],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008800185,0.0005059754,0.9478909,0.0000298689,0.0001605452,0.000001555221,0.005399925,0.0006744113,0.0001292282,0.003933574,0.001408537,0.03977751],"study_design_scores_gemma":[0.001123571,0.00009464077,0.9853478,0.00007901781,0.0006814547,0.0000109222,0.0009614588,0.0002585684,0.00001161601,0.009494006,0.001828904,0.0001080281],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9726633,0.005116699,0.007026893,0.01383276,0.0001098864,0.0006820113,0.0001637494,0.00002879536,0.0003758933],"genre_scores_gemma":[0.9918564,0.007648779,0.00008294019,0.000155417,0.0001660918,0.00003814204,0.000001305802,0.00001172686,0.00003919366],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03966948,"threshold_uncertainty_score":0.8651012,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2037669689","doi":"10.1590/s1413-86702002000400005","title":"The application of latent class analysis for diagnostic test validation of chronic Trypanosoma cruzi infection in blood donors","year":2002,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University","funders":"","keywords":"IIf; Serology; Gold standard (test); Immunoassay; Indirect immunofluorescence; Antibody; Chagas disease; Latent class model; Medicine; Trypanosoma cruzi; Immunology; Biology; Virology; Internal medicine","authors":[{"name":"Dante Mário Langhi","is_ca":false},{"name":"José Orlando Bordin","is_ca":false},{"name":"Adauto Castelo","is_ca":true},{"name":"Stephen D. Walter","is_ca":true},{"name":"Hélio Moraes‐Souza","is_ca":true},{"name":"Robert J. Stumpf","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01375788616918559,"gpt":0.2828674429833472,"spread":0.2691095568141616,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005986038,0.0001200196,0.0003493786,0.0004037315,0.0001690977,0.00002831963,0.0001730602,0.00005281606,0.00005288236],"category_scores_gemma":[0.003286584,0.00007365429,0.0004032269,0.001208109,0.000229891,0.0001378827,0.00002298564,0.0001766978,0.000003927197],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001542581,"about_ca_system_score_gemma":0.0001393345,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001176957,"about_ca_topic_score_gemma":0.0003635229,"domain_scores_codex":[0.998473,0.0001104825,0.0007449185,0.0001248677,0.0003370083,0.0002096567],"domain_scores_gemma":[0.9959039,0.002332744,0.0006855566,0.000379643,0.0005694658,0.0001286564],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001181231,0.00177239,0.9444046,0.0001420028,0.0008107607,0.000002041495,0.00009386372,0.002881027,0.03736233,0.0003000293,0.0004081456,0.01170467],"study_design_scores_gemma":[0.001730225,0.001308948,0.9850327,0.00007763172,0.00147483,0.00005108097,0.00003237137,0.001692359,0.007650542,0.0005165036,0.0003679249,0.00006489916],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937582,0.001651221,0.002374571,0.001214653,0.0000583258,0.0007403477,0.00005743452,0.00001288007,0.0001323613],"genre_scores_gemma":[0.9952561,0.004361427,0.00001447794,0.00002096123,0.000176847,0.00009326905,0.0000159532,0.00001349357,0.00004742154],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04062807,"threshold_uncertainty_score":0.3934585,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1647944961","doi":"10.1016/j.bjid.2015.05.005","title":"Application of the ATLAS score for evaluating the severity of Clostridium difficile infection in teaching hospitals in Mexico","year":2015,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Clostridium difficile; Internal medicine; Observational study; Antibiotics; Intensive care medicine","authors":[{"name":"Raúl Hernández-García","is_ca":false},{"name":"Elvira Garza‐González","is_ca":false},{"name":"Mark A. Miller","is_ca":true},{"name":"Giovanna Yazmin Arteaga Muller","is_ca":false},{"name":"Alejandra M. Galván-De los Santos","is_ca":false},{"name":"Adrián Camacho-Ortíz","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03047241881867387,"gpt":0.3429266614260086,"spread":0.3124542426073348,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00236817,0.0001763701,0.000461384,0.000242425,0.0001384705,0.0000244972,0.0003188189,0.00008268901,0.000007658232],"category_scores_gemma":[0.004218228,0.00009332532,0.0003449403,0.0007471832,0.0002499108,0.0001316945,0.0001018346,0.0006136622,0.0000013918],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003373418,"about_ca_system_score_gemma":0.0006691418,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004710886,"about_ca_topic_score_gemma":0.0001810462,"domain_scores_codex":[0.9974627,0.0004790139,0.0008886894,0.0001661619,0.0007333187,0.0002700374],"domain_scores_gemma":[0.997358,0.0006862366,0.000740398,0.0004528876,0.0006397461,0.000122743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001316842,0.001060453,0.959294,0.0002841278,0.0001075874,0.000004227858,0.001302748,0.004582888,0.01190649,0.0001311767,0.0005419784,0.01946753],"study_design_scores_gemma":[0.00725553,0.003284973,0.8667286,0.001352907,0.0004629274,0.0002606561,0.001197236,0.006524918,0.109538,0.003017786,0.0001487886,0.0002276739],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995921,0.000885864,0.0002182253,0.001280781,0.0002007322,0.001239224,0.00003188094,0.0000097707,0.0002125946],"genre_scores_gemma":[0.9995005,0.0001198879,0.00001754286,0.00004618243,0.0002150273,0.00005051246,0.000005947824,0.00002181048,0.00002261768],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09763151,"threshold_uncertainty_score":0.5049918,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1548570476","doi":"10.1590/s1413-86702009000600004","title":"Molecular epidemiology of Acinetobacter baumannii in central intensive care unit in Kosova teaching hospital","year":2009,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Kingston General Hospital; Queen's University","funders":"","keywords":"Acinetobacter baumannii; Pulsed-field gel electrophoresis; Acinetobacter; Epidemiology; Molecular epidemiology; Intensive care unit; Microbiology; Bacteremia; Pneumonia; Medicine; Intensive care; Coinfection; Outbreak; Isolation (microbiology); Antibiotics; Biology; Intensive care medicine; Genotype; Virology; Internal medicine; Pseudomonas aeruginosa; Bacteria","authors":[{"name":"Lul Raka","is_ca":false},{"name":"Smilja Kalenc","is_ca":false},{"name":"Zrinka Bošnjak","is_ca":false},{"name":"Ana Budimir","is_ca":false},{"name":"Stjepan Katić","is_ca":false},{"name":"Dubravko Šijak","is_ca":false},{"name":"Gjyle Mulliqi‐Osmani","is_ca":false},{"name":"Dick Zoutman","is_ca":true},{"name":"Arbëresha Jaka","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007641441296758916,"gpt":0.2739152382021828,"spread":0.2662737969054239,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002732928,0.0001724026,0.0003890571,0.0001266389,0.00003385211,0.000007203357,0.0002885887,0.0001050293,0.000009631128],"category_scores_gemma":[0.001350558,0.0001279541,0.0001996349,0.0001064501,0.0001616882,0.00001498354,0.00004429392,0.0002897208,8.803856e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004008074,"about_ca_system_score_gemma":0.0001150108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002268492,"about_ca_topic_score_gemma":0.00005020613,"domain_scores_codex":[0.9983891,0.0004165278,0.0006163284,0.0001719067,0.00009587099,0.0003102381],"domain_scores_gemma":[0.9988583,0.00006959005,0.000420576,0.000264375,0.0002906379,0.00009645925],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002572739,0.0001236225,0.9841409,0.000022163,0.00005079419,0.00006666064,0.0004569574,0.0008217857,0.01184453,0.0001317681,0.0001243175,0.001959237],"study_design_scores_gemma":[0.0009604631,0.000904271,0.992349,0.00018395,0.00003767791,0.0000640233,0.001531822,0.000007644669,0.002943562,0.000799525,0.00008135121,0.0001366813],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954274,0.003487997,0.0001645652,0.0003777504,0.0002012871,0.0001453343,0.00001304914,0.000003577535,0.0001790384],"genre_scores_gemma":[0.9990197,0.000198622,0.00005869707,0.0005453554,0.0001393837,7.653139e-7,0.00001594374,0.00001336886,0.00000810913],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008900966,"threshold_uncertainty_score":0.5217815,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4360955469","doi":"10.1016/j.bjid.2023.102759","title":"Epidemiology and in vitro activity of ceftazidime-avibactam and comparator agents against multidrug-resistant isolates of Enterobacterales and Pseudomonas aeruginosa collected in Latin America as part of the ATLAS surveillance program in 2015‒2020","year":2023,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"Pfizer","keywords":"Broth microdilution; Ceftazidime/avibactam; Pseudomonas aeruginosa; Antimicrobial; Multiple drug resistance; Microbiology; Ceftazidime; Biology; Medicine; Minimum inhibitory concentration; Drug resistance; Bacteria","authors":[{"name":"Mark G. Wise","is_ca":false},{"name":"James A. Karlowsky","is_ca":true},{"name":"Elkin Lemos","is_ca":false},{"name":"Rafael Ricardo Valdez","is_ca":false},{"name":"Daniel F. Sahm","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01028558604774261,"gpt":0.2796177144830896,"spread":0.269332128435347,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003560727,0.0001579968,0.0005561139,0.0001050768,0.00003630776,0.000007459834,0.0001425732,0.00007263695,0.000002065074],"category_scores_gemma":[0.0007034836,0.0001077836,0.00008058124,0.000340996,0.000596008,0.000014208,0.0001120131,0.0001341559,1.290611e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001866683,"about_ca_system_score_gemma":0.00008950714,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001159327,"about_ca_topic_score_gemma":0.0006075652,"domain_scores_codex":[0.9982138,0.000679221,0.0006309556,0.0001857869,0.00008491104,0.0002053794],"domain_scores_gemma":[0.9986079,0.0003491073,0.0007074334,0.0001851983,0.00008103403,0.00006932748],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001329815,0.0002047303,0.7462971,0.00008476442,0.00005549542,0.00000537679,0.0001108638,0.00007462663,0.251067,8.448449e-7,0.00009545746,0.0006739273],"study_design_scores_gemma":[0.001286191,0.0003181452,0.9749492,0.0001963871,0.00001683838,0.00001292745,0.0001174447,0.0002137115,0.02269709,0.00004890668,0.0000536239,0.00008947304],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982611,0.001085848,0.000001736735,0.0001662531,0.00005671172,0.0003299077,0.00008339107,0.000003560097,0.00001148023],"genre_scores_gemma":[0.9976954,0.002183669,0.00004209523,0.00002618253,0.00001814244,0.000005211334,0.000009946496,0.00001064434,0.000008677465],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2286521,"threshold_uncertainty_score":0.439529,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1677648145","doi":"10.1016/j.bjid.2015.05.001","title":"Ocular infection associated with Delftia lacustris: first report","year":2015,"lang":"en","type":"letter","venue":"The Brazilian Journal of Infectious Diseases","topic":"Infections and bacterial resistance","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Asia Pacific Foundation of Canada","funders":"","keywords":"Medicine; Microbiology; Biology; Virology","authors":[{"name":"Kyung Mok Sohn","is_ca":false},{"name":"Jin-Yang Baek","is_ca":true},{"name":"Shinhye Cheon","is_ca":false},{"name":"Kim Ys","is_ca":false},{"name":"Sun Hoe Koo","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006924331643326951,"gpt":0.2272990049987808,"spread":0.2203746733554539,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004877332,0.0003906813,0.0004689014,0.0001516756,0.0003139842,0.0001500996,0.0002772598,0.0005284221,0.0000513462],"category_scores_gemma":[0.001121129,0.000251536,0.0004114586,0.0002712612,0.0002308002,0.00002116312,0.00006388608,0.0008316104,0.000009392388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001862433,"about_ca_system_score_gemma":0.0007676638,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005578644,"about_ca_topic_score_gemma":0.0002608739,"domain_scores_codex":[0.9979686,0.0002824371,0.0006067135,0.000300518,0.000486136,0.0003556439],"domain_scores_gemma":[0.996657,0.00006222604,0.001353507,0.0005547675,0.001232778,0.0001397115],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00020469,0.0001598612,0.0280788,0.00005581584,0.001073268,0.001173024,0.00001750856,0.0002656404,0.0002329552,0.000001641715,0.968495,0.0002417768],"study_design_scores_gemma":[0.001261855,0.001439201,0.01495545,0.0003440251,0.0009720221,0.00376989,0.000009913295,0.000002248687,0.0004669025,0.0001528463,0.9761525,0.0004730891],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9471952,0.003258484,0.001168133,0.04052911,0.00356563,0.0008278504,0.0003393472,0.0001001072,0.00301619],"genre_scores_gemma":[0.9436402,0.0008228653,0.00002204315,0.03709425,0.01355865,0.00004958667,0.001078536,0.0001974895,0.003536435],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01312335,"threshold_uncertainty_score":0.9999937,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1978077509","doi":"10.1016/s1413-8670(11)70261-6","title":"Progressive multifocal leukoencephalopathy restricted to the posterior fossa in a patient with systemic lupus erythematosus","year":2011,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Montreal General Hospital; McGill University Health Centre; McGill University","funders":"","keywords":"Progressive multifocal leukoencephalopathy; Medicine; Leukoencephalopathy; Demyelinating disease; Presentation (obstetrics); Systemic disease; Pathology; JC virus; Posterior fossa; Central nervous system; Dermatology; Disease; Slow virus; Immunology; Multiple sclerosis; Surgery; Internal medicine","authors":[{"name":"Fabrício Guimarães Gonçalves","is_ca":true},{"name":"Leslie R. Lamb","is_ca":true},{"name":"Raquel del Carpio-O’Donovan","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009120995774625192,"gpt":0.2342876831296237,"spread":0.2251666873549985,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001109241,0.0002436225,0.0004177217,0.000250878,0.0001757058,0.00004346352,0.0002520221,0.00006402508,0.00005878826],"category_scores_gemma":[0.0002848128,0.0001049886,0.0002079137,0.0005721322,0.0002125592,0.0001337313,0.00006014206,0.0003465445,0.00002756811],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001414746,"about_ca_system_score_gemma":0.0004371854,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006903656,"about_ca_topic_score_gemma":0.00003266762,"domain_scores_codex":[0.9981954,0.0002190734,0.0005961671,0.0001849054,0.0004495119,0.0003549135],"domain_scores_gemma":[0.9982895,0.0001191874,0.0004658155,0.0003802188,0.0003023961,0.0004428477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01528918,0.003385426,0.912684,0.0002800244,0.0008584294,0.0193915,0.01748857,0.0003882333,0.0007901986,0.00006436068,0.00172361,0.02765645],"study_design_scores_gemma":[0.01084885,0.01099322,0.7674005,0.006312483,0.001903021,0.1922165,0.008277315,0.0001233883,0.0008311516,0.0002542877,0.000283936,0.0005552929],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914011,0.006473079,0.00002589234,0.0003716016,0.0003655013,0.0009643953,0.00002565709,0.00004127728,0.0003314645],"genre_scores_gemma":[0.9992611,0.00007363031,0.00003298951,0.000359708,0.0001437414,0.0000580413,0.000001854512,0.00003142589,0.00003755007],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.172825,"threshold_uncertainty_score":0.4281312,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4220818539","doi":"10.1016/j.bjid.2022.102347","title":"Brazilian guidelines for the treatment of outpatients with suspected or confirmed COVID-19. A joint guideline of the Brazilian Association of Emergency Medicine (ABRAMEDE), Brazilian Medical Association (AMB), Brazilian Society of Angiology and Vascular Surgery (SBACV), Brazilian Society of Geriatrics and Gerontology (SBGG), Brazilian Society of Infectious Diseases (SBI), Brazilian Society of Family and Community Medicine (SBFMC), and Brazilian Thoracic Society (SBPT)","year":2022,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"COVID-19 Clinical Research Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McMaster University; Impact","funders":"Sociedade Brasileira de Infectologia; Associação Médica Brasileira","keywords":"Medicine; Guideline; Azithromycin; Family medicine; Alternative medicine; MEDLINE; Intensive care medicine; Pathology","authors":[{"name":"Maicon Falavigna","is_ca":true},{"name":"Karlyse Claudino Belli","is_ca":false},{"name":"Alexandre Naime Barbosa","is_ca":false},{"name":"Alexandre Prehn Zavascki","is_ca":false},{"name":"Ana Catharina de Seixas Santos Nastri","is_ca":false},{"name":"Christiane Machado Santana","is_ca":false},{"name":"Cinara Stein","is_ca":false},{"name":"Débora Dalmas Gräf","is_ca":false},{"name":"Flavio Cadegiani","is_ca":false},{"name":"Hélio Penna Guimarães","is_ca":false},{"name":"José Tadeu Colares Monteiro","is_ca":false},{"name":"Juliana Carvalho Ferreira","is_ca":false},{"name":"Luciano César Pontes Azevedo","is_ca":false},{"name":"Marcelo Mihailenko Chaves Magri","is_ca":false},{"name":"Marcone Lima Sobreira","is_ca":false},{"name":"Maria Beatriz Gandra de Souza Dias","is_ca":false},{"name":"Maura Salaroli de Oliveira","is_ca":false},{"name":"Mírian de Freitas Dal Ben Corradi","is_ca":false},{"name":"Régis Goulart Rosa","is_ca":false},{"name":"Ricardo Souza Heinzelmann","is_ca":false},{"name":"Rosemeri Maurici da Silva","is_ca":false},{"name":"Rubens Belfort","is_ca":false},{"name":"Sérgio Cimerman","is_ca":false},{"name":"Verônica Colpani","is_ca":false},{"name":"Viviane Cordeiro Veiga","is_ca":false},{"name":"Carlos Roberto Ribeiro de Carvalho","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07941028802093388,"gpt":0.4121062569235968,"spread":0.3326959689026629,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow","sts"],"consensus_categories":["metaepi_narrow","sts"],"category_scores_codex":[0.01284443,0.00167281,0.006514904,0.0005329428,0.002098674,0.00004370244,0.001416599,0.001146734,0.0005500079],"category_scores_gemma":[0.02823085,0.001056687,0.004292235,0.003053196,0.008489142,0.0005507936,0.001197063,0.002200119,3.988486e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001652005,"about_ca_system_score_gemma":0.004719566,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005196028,"about_ca_topic_score_gemma":0.002919222,"domain_scores_codex":[0.9800677,0.003840217,0.008352134,0.001430738,0.004670016,0.001639166],"domain_scores_gemma":[0.9546881,0.02275017,0.01175478,0.002137895,0.007157011,0.001512066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004188609,0.005016652,0.8465914,0.01052564,0.01399509,0.000008079835,0.02087684,0.0003614668,0.005118977,0.00008124078,0.08242068,0.01081533],"study_design_scores_gemma":[0.03506966,0.02134893,0.8658287,0.002808865,0.01306944,0.0001662991,0.0368159,0.005422915,0.001229399,0.002457151,0.01421605,0.001566684],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9404169,0.01703738,0.001613159,0.0320906,0.0009536807,0.004739348,0.002994318,0.0001190998,0.00003550946],"genre_scores_gemma":[0.9253218,0.0688756,0.0008113869,0.003312428,0.0006672101,0.0002001674,0.0002981479,0.0002111268,0.0003021171],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06820463,"threshold_uncertainty_score":0.9996019,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2169802752","doi":"10.1590/s1413-86702004000500002","title":"Medical dental prophylaxis of endocarditis","year":2004,"lang":"en","type":"review","venue":"The Brazilian Journal of Infectious Diseases","topic":"Infective Endocarditis Diagnosis and Management","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Regina","funders":"","keywords":"Medicine; Bacteremia; Endocarditis; Intensive care medicine; Antibiotics; Antibiotic prophylaxis; Infective endocarditis; Immunology; Surgery","authors":[{"name":"Regina C. Basilio","is_ca":true},{"name":"Francisco Eugênio Loducca","is_ca":false},{"name":"Paulo C. Haddad","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01297995368330267,"gpt":0.3149807234027079,"spread":0.3020007697194052,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005703206,0.0004657872,0.002694928,0.000483954,0.0001156229,0.00003790127,0.0004196947,0.0002090532,0.0006954515],"category_scores_gemma":[0.001417282,0.0002666683,0.002926254,0.0004723215,0.0004414645,0.0001150964,0.0001505918,0.0008614372,0.00005285021],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004823064,"about_ca_system_score_gemma":0.001799681,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002452729,"about_ca_topic_score_gemma":0.000005319428,"domain_scores_codex":[0.9963089,0.0004224253,0.00138851,0.0002462764,0.001297732,0.0003361742],"domain_scores_gemma":[0.9967737,0.0004876468,0.001426154,0.0004765842,0.0003899894,0.0004459866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002407996,0.0009968018,0.002333105,0.01877858,0.003171044,0.001794268,0.00003984655,0.000006361718,1.303727e-7,0.0004796768,0.004003186,0.9683729],"study_design_scores_gemma":[0.004120878,0.0043413,0.009075429,0.09347295,0.01508172,0.01900427,0.00009922685,4.440885e-7,0.00001177521,0.0006720944,0.853578,0.0005418795],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0007890127,0.9944271,0.00009331519,0.00003131741,0.001314347,0.001029928,0.0001021945,0.00003092606,0.0021819],"genre_scores_gemma":[0.02781863,0.9706069,0.0000123835,0.0001147866,0.001269648,0.00005987411,0.00002532949,0.00007128277,0.00002119149],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.967831,"threshold_uncertainty_score":0.9999785,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4376226325","doi":"10.1016/j.bjid.2023.102775","title":"In vitro activity of imipenem/relebactam against non-Morganellaceae Enterobacterales and Pseudomonas aeruginosa in Latin America: SMART 2018‒2020","year":2023,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Manitoba","funders":"Merck Sharp and Dohme; Merck","keywords":"Imipenem; Meropenem; Broth microdilution; Amikacin; Pseudomonas aeruginosa; Microbiology; Piperacillin; Carbapenem; Piperacillin/tazobactam; Tazobactam; Medicine; Biology; Antimicrobial; Antibiotic resistance; Antibiotics; Bacteria; Minimum inhibitory concentration","authors":[{"name":"James A. Karlowsky","is_ca":true},{"name":"Sibylle Lob","is_ca":false},{"name":"Fakhar Siddiqui","is_ca":false},{"name":"Jacqueline Pavia","is_ca":false},{"name":"C Andrew DeRyke","is_ca":false},{"name":"Katherine Young","is_ca":false},{"name":"Mary Motyl","is_ca":false},{"name":"Daniel F. Sahm","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.004966350981742862,"gpt":0.2317934240045,"spread":0.2268270730227571,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000208819,0.0001813904,0.000348902,0.0001435945,0.00004707279,0.00003015176,0.0002122022,0.00007452652,0.00001172377],"category_scores_gemma":[0.0002083831,0.0001418296,0.0001251031,0.0003106425,0.0002424235,0.00002588131,0.0001081375,0.0001651256,0.000004834418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003567189,"about_ca_system_score_gemma":0.00009534426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000408042,"about_ca_topic_score_gemma":0.00009225342,"domain_scores_codex":[0.9988219,0.0001767553,0.0004199545,0.0001950827,0.0001408107,0.0002455572],"domain_scores_gemma":[0.9991115,0.00009061066,0.000387808,0.0002453961,0.00006535528,0.00009937692],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005459411,0.0001456008,0.3527817,0.00004953442,0.00005363079,0.00005534271,0.000104298,0.00007687268,0.6433701,6.91698e-7,0.001187489,0.001628793],"study_design_scores_gemma":[0.001124528,0.0002427307,0.8843053,0.0001174626,0.00002956414,0.00004846573,0.0001629998,0.00004229734,0.1134611,0.00005624861,0.0002543546,0.0001549608],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988847,0.0002570707,0.00002434435,0.0003368034,0.0001988525,0.0001498403,0.00004025556,0.000006515648,0.0001015673],"genre_scores_gemma":[0.9980066,0.001598693,0.00003184589,0.0001209773,0.0001358494,0.000002353318,0.00001447931,0.00002133321,0.0000678923],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5315236,"threshold_uncertainty_score":0.5783643,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4304127947","doi":"10.1016/j.bjid.2022.102705","title":"Systematic review on efficacy of preventive measures for surgical site infection by multiple-drug resistant gram-negative bacilli","year":2022,"lang":"en","type":"review","venue":"The Brazilian Journal of Infectious Diseases","topic":"Surgical site infection prevention","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"Pan American Health Organization; Ministério da Saúde; World Health Organization","keywords":"Medicine; Observational study; Internal medicine; Randomized controlled trial; Transplantation; Surgery; Intensive care medicine","authors":[{"name":"Juliana Arruda de Matos","is_ca":false},{"name":"Amanda da Silva Gomes","is_ca":false},{"name":"Carla Ormundo Gonçalves Ximenes Lima","is_ca":false},{"name":"Carolina Arana Stanis Schmaltz","is_ca":false},{"name":"Cristiane Rocha de Oliveira","is_ca":false},{"name":"Grasiela Martins da Silva","is_ca":false},{"name":"Júlia Herkenhoff Carijó","is_ca":false},{"name":"Marilena Aguiar Lopes","is_ca":false},{"name":"Quenia Cristina Dias Morais","is_ca":false},{"name":"Pedro Emmanuel Alvarenga Americano do Brasil","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02396891895511804,"gpt":0.3299153440045447,"spread":0.3059464250494267,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002995303,0.0007214705,0.004774315,0.0005299395,0.000360739,0.00005051685,0.0003177967,0.0001827643,0.0008621695],"category_scores_gemma":[0.009931639,0.0004285346,0.00486668,0.001084901,0.0002256783,0.0001732004,0.00008367164,0.001027908,0.00002484566],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008725522,"about_ca_system_score_gemma":0.0005120663,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003314203,"about_ca_topic_score_gemma":0.00001086257,"domain_scores_codex":[0.9909145,0.003809899,0.003177812,0.0004575473,0.001266193,0.0003740895],"domain_scores_gemma":[0.9834949,0.009536669,0.005205892,0.0006660369,0.0007319707,0.000364565],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","study_design_scores_codex":[0.001689211,0.003170692,0.0002478617,0.8705467,0.00557174,0.00009854316,0.0001095074,0.00002211359,0.000003043388,0.0000461944,0.003501138,0.1149933],"study_design_scores_gemma":[0.005280253,0.002608505,0.0001700523,0.5979337,0.0330964,0.001451978,0.00002683093,0.000003166245,0.00001657696,0.0001539721,0.3587515,0.0005070661],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0008796339,0.9898636,0.0001204126,0.00006989498,0.0005644836,0.007696998,0.000497243,0.00007340106,0.0002342877],"genre_scores_gemma":[0.003793209,0.9944873,0.000007757355,0.00009131698,0.0002568486,0.0006553677,0.0001941623,0.0001074807,0.0004065166],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.3552504,"threshold_uncertainty_score":0.9998167,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2155299303","doi":"10.1590/s1413-86702002000200004","title":"Antimicrobial therapy for community-acquired pneumonia in adults","year":2002,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Antimicrobial; Community-acquired pneumonia; Medicine; Etiology; Pneumonia; Intensive care medicine; Family medicine; Antibiotic resistance; Antimicrobial stewardship; Antibiotics; Internal medicine; Microbiology; Biology","authors":[{"name":"Clóvis Arns da Cunha","is_ca":false},{"name":"Hélio S. Sader","is_ca":false},{"name":"Antônio Carlos Nicodemo","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0182494730534297,"gpt":0.2715785614624504,"spread":0.2533290884090206,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002820373,0.0001665504,0.0003622681,0.0002549123,0.000379119,0.0000356277,0.0001830153,0.00006777667,0.0001108792],"category_scores_gemma":[0.0002645029,0.0001062304,0.0003485184,0.000306083,0.0001886981,0.0001511614,0.00001913743,0.0003443772,0.00001589146],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008167145,"about_ca_system_score_gemma":0.00008092523,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001818703,"about_ca_topic_score_gemma":0.00003814566,"domain_scores_codex":[0.9987749,0.0002701081,0.0004671708,0.00008804863,0.0001551502,0.0002446327],"domain_scores_gemma":[0.9987678,0.0002857853,0.0002629192,0.0002871967,0.0002260945,0.0001701832],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001954624,0.0080232,0.8560551,0.0003828972,0.0006163538,0.0002258153,0.004655806,0.0003782376,0.06165504,0.00008296739,0.01230267,0.05366723],"study_design_scores_gemma":[0.01925652,0.005143071,0.9518386,0.001103334,0.0003270078,0.002713322,0.0006699853,0.0002710459,0.001724147,0.0006801327,0.01588146,0.0003914291],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951708,0.0007459233,0.00004295896,0.002549801,0.0004148967,0.000465171,0.00002506311,0.00003910672,0.0005462651],"genre_scores_gemma":[0.9968225,0.0006495953,0.000006819133,0.002022967,0.0003651173,0.00001762871,0.000002840819,0.00002697279,0.00008554493],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0957834,"threshold_uncertainty_score":0.4331951,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4411261676","doi":"10.1016/j.bjid.2025.104555","title":"Emergency and persistence of Escherichia coli ST131 as community-onset antimicrobial resistant urinary tract infection in Rio de Janeiro, Brazil","year":2025,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Urinary Tract Infections Management","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Discovery Air (Canada)","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Instituto Nacional de Pesquisas em Resistência a Antimicrobianos","keywords":"Persistence (discontinuity); Antimicrobial; Escherichia coli; Urinary system; Microbiology; Biology; Medicine; Internal medicine","authors":[{"name":"Eduardo Moreira de Castro","is_ca":false},{"name":"Isadora Silva Barcellos","is_ca":false},{"name":"Guilherme Santoro‐Lopes","is_ca":false},{"name":"Luís Guilherme de Araújo Longo","is_ca":false},{"name":"Mariana Anjo Barbosa","is_ca":false},{"name":"Lucas Cecílio Vilar","is_ca":false},{"name":"Adriana Lúcia Pires Ferreira","is_ca":true},{"name":"Karla Rodrigues Miranda","is_ca":false},{"name":"Beatriz Meurer Moreira","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01293279456171406,"gpt":0.285405874614837,"spread":0.2724730800531229,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009130205,0.000224551,0.0004646147,0.0006442619,0.0003782524,0.00003351416,0.000188196,0.00008404236,0.0001383043],"category_scores_gemma":[0.0006654249,0.0001848254,0.0002681073,0.00081256,0.0002916956,0.0002652688,0.0001048324,0.0007976879,0.000004425335],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002901783,"about_ca_system_score_gemma":0.0004264017,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000709914,"about_ca_topic_score_gemma":0.0001954343,"domain_scores_codex":[0.9978976,0.0007135759,0.0007529162,0.0001446246,0.0002248006,0.0002665319],"domain_scores_gemma":[0.998433,0.0002925599,0.00047481,0.0003991865,0.0002436581,0.0001567685],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001536855,0.009622848,0.9799619,0.0007092694,0.00038891,0.000191151,0.0008145752,0.0003380137,0.004015347,0.0000802815,0.0016621,0.0006787458],"study_design_scores_gemma":[0.00205669,0.004189863,0.9881098,0.0007164268,0.0007458733,0.001260397,0.0005785985,0.00003380018,0.0005978035,0.0008162931,0.0007518043,0.0001426571],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928732,0.0009861065,0.00008985212,0.000855748,0.0003283861,0.0004004951,0.00001528338,0.00003446628,0.004416496],"genre_scores_gemma":[0.9970888,0.002151505,0.00004206924,0.0002942041,0.0000627642,0.00001032915,0.000004847281,0.0000197011,0.0003257193],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008147889,"threshold_uncertainty_score":0.7536961,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4402947058","doi":"10.1016/j.bjid.2024.103875","title":"Detection of Bartonella henselae DNA in Triatoma sordida collected in peridomiciliary environments","year":2024,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Bartonella species infections research","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Memorial University of Newfoundland","funders":"Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Bartonella; Bartonella henselae; Triatoma; Biology; Virology; Microbiology; Zoology; Genetics; Serology","authors":[{"name":"Luciene Silva dos Santos","is_ca":false},{"name":"Alexandre Seiji Maekawa","is_ca":true},{"name":"Dayane Pires da Silva","is_ca":false},{"name":"Carlos Eduardo Almeida","is_ca":false},{"name":"Paulo Eduardo Neves Ferreira Velho","is_ca":false},{"name":"Marina Rovani Drummond","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.006086499706556667,"gpt":0.2406408361496215,"spread":0.2345543364430648,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006123318,0.0001852306,0.0004173997,0.0009002238,0.000127816,0.00003426913,0.0002527936,0.0001574322,0.0005814519],"category_scores_gemma":[0.0003974119,0.0001394457,0.0002529891,0.0009584102,0.0004532831,0.0001855498,0.00007278257,0.0007018993,0.000104441],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003579657,"about_ca_system_score_gemma":0.0002480602,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008633912,"about_ca_topic_score_gemma":0.0001648643,"domain_scores_codex":[0.9977966,0.0007850293,0.0007758669,0.0001982295,0.0001144024,0.0003298712],"domain_scores_gemma":[0.998843,0.0006170589,0.0001861264,0.0002509648,0.00005848099,0.00004437464],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001986413,0.001245785,0.07304654,0.0001434768,0.0006799835,0.0002059919,0.001403565,0.0009858928,0.9002856,0.0002302814,0.001930544,0.01785592],"study_design_scores_gemma":[0.01108416,0.002188791,0.6969947,0.0007639858,0.000316128,0.002871174,0.001716896,0.000289011,0.2612869,0.001840369,0.02007955,0.0005683575],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896566,0.007954992,0.00009964962,0.000139042,0.00103933,0.0003133153,0.00002812825,0.00002613565,0.0007428051],"genre_scores_gemma":[0.9983567,0.0008379198,0.000002067487,0.00002261906,0.00006660286,0.00001662357,0.000004283623,0.00002426026,0.0006689436],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6389987,"threshold_uncertainty_score":0.636649,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4395079182","doi":"10.1016/j.bjid.2024.103744","title":"Costs of hospital admissions due to COVID-19 in the federal capital of Brazil: a study based on hospital admission authorizations","year":2024,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"COVID-19 and healthcare impacts","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Ministério da Educação; Ministerio de Economía y Competitividad; University of New Brunswick; Universidade de Brasília","keywords":"Medicine; Authorization; Coronavirus disease 2019 (COVID-19); Emergency medicine; Activity-based costing; Cohort; Internal medicine; Business; Disease","authors":[{"name":"Ana Carolina Esteves da Silva Pereira","is_ca":false},{"name":"Luciana Guerra Gallo","is_ca":false},{"name":"Ana Flávia de Morais Oliveira","is_ca":false},{"name":"Maria Regina Fernandes de Oliveira","is_ca":false},{"name":"Henry Maia Peixoto","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01949266731454545,"gpt":0.3735826983710969,"spread":0.3540900310565515,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008041649,0.0002397944,0.0005290324,0.0006424069,0.0002509454,0.00007227854,0.000298454,0.00007515022,0.0002183579],"category_scores_gemma":[0.008225488,0.0001338876,0.0003445388,0.001013544,0.0001072468,0.0001504241,0.0000467745,0.0004946731,0.000006832488],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000479515,"about_ca_system_score_gemma":0.004762057,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003428585,"about_ca_topic_score_gemma":0.0001789075,"domain_scores_codex":[0.9974119,0.0004461964,0.0008041779,0.0002258236,0.000816865,0.0002950183],"domain_scores_gemma":[0.9963824,0.001429827,0.0003066124,0.0004231234,0.0003186157,0.001139441],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002856911,0.01716406,0.8885333,0.001282078,0.0004835143,0.002915339,0.04404837,0.004599382,0.0003530238,0.0009801663,0.02701296,0.009770904],"study_design_scores_gemma":[0.004226323,0.02771419,0.9530035,0.002219504,0.0005293743,0.0002299292,0.009505173,0.000462573,0.0001202479,0.0008143123,0.0009057689,0.0002691578],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9537051,0.0005074453,0.0005128908,0.04292529,0.0006265361,0.00143284,0.0001180028,0.00004342041,0.0001284259],"genre_scores_gemma":[0.9964949,0.0000270264,0.00001620942,0.003045698,0.0003199297,0.00002278046,0.000009198469,0.00003206882,0.00003221194],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06447014,"threshold_uncertainty_score":0.9847272,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4256685189","doi":"10.1590/s1413-86702011000600020","title":"Progressive multifocal leukoencephalopathy restricted to the posterior fossa in a patient with systemic lupus erythematosus","year":2011,"lang":"en","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University; Montreal General Hospital","funders":"","keywords":"Progressive multifocal leukoencephalopathy; Medicine; Demyelinating disease; Leukoencephalopathy; Presentation (obstetrics); Posterior fossa; Central nervous system; Systemic disease; Slow virus; Systemic lupus erythematosus; Pathology; Posterior cranial fossa; Disease; Dermatology; Immunology; Multiple sclerosis; Surgery; Internal medicine","authors":[{"name":"Fabrício Guimarães Gonçalves","is_ca":false},{"name":"Leslie R. Lamb","is_ca":true},{"name":"Raquel del Carpio-O’Donovan","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009120995774625192,"gpt":0.2342876831296237,"spread":0.2251666873549985,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001109241,0.0002436225,0.0004177217,0.000250878,0.0001757058,0.00004346352,0.0002520221,0.00006402508,0.00005878826],"category_scores_gemma":[0.0002848128,0.0001049886,0.0002079137,0.0005721322,0.0002125592,0.0001337313,0.00006014206,0.0003465445,0.00002756811],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001414746,"about_ca_system_score_gemma":0.0004371854,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006903656,"about_ca_topic_score_gemma":0.00003266762,"domain_scores_codex":[0.9981954,0.0002190734,0.0005961671,0.0001849054,0.0004495119,0.0003549135],"domain_scores_gemma":[0.9982895,0.0001191874,0.0004658155,0.0003802188,0.0003023961,0.0004428477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01528918,0.003385426,0.912684,0.0002800244,0.0008584294,0.0193915,0.01748857,0.0003882333,0.0007901986,0.00006436068,0.00172361,0.02765645],"study_design_scores_gemma":[0.01084885,0.01099322,0.7674005,0.006312483,0.001903021,0.1922165,0.008277315,0.0001233883,0.0008311516,0.0002542877,0.000283936,0.0005552929],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9914011,0.006473079,0.00002589234,0.0003716016,0.0003655013,0.0009643953,0.00002565709,0.00004127728,0.0003314645],"genre_scores_gemma":[0.9992611,0.00007363031,0.00003298951,0.000359708,0.0001437414,0.0000580413,0.000001854512,0.00003142589,0.00003755007],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.172825,"threshold_uncertainty_score":0.4281312,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4404241086","doi":"10.1016/j.bjid.2024.104425","title":"VACINA DE PREFUSÃO DE PROTEÍNA F DO VÍRUS SINCICIAL RESPIRATÓRIO ADJUVANTADA (RSVPREF3OA) É IMUNOGÊNICA E BEM TOLERADA EM ADULTOS 50-59 ANOS, INCLUINDO ADULTOS COM RISCO AUMENTADO DE DOENÇA POR VSR","year":2024,"lang":"pt","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Physics","authors":[{"name":"Lessandra Michelin","is_ca":false},{"name":"Tino F. Schwarz","is_ca":false},{"name":"Sebastián A Núñez","is_ca":false},{"name":"Juan Rodríguez‐García","is_ca":false},{"name":"Marek Mital","is_ca":false},{"name":"Carlos Zala","is_ca":false},{"name":"Bernhard Schmitt","is_ca":false},{"name":"Nicole Toursarkissian","is_ca":false},{"name":"Dolores Ochoa Mazarro","is_ca":false},{"name":"Josef Großkopf","is_ca":false},{"name":"Christine Voors‐Pette","is_ca":false},{"name":"Hemalini Mehta","is_ca":false},{"name":"Hiwot Amare Hailemariam","is_ca":false},{"name":"Magali de Heusch","is_ca":false},{"name":"Silvia Damaso","is_ca":false},{"name":"Marie‐Pierre David","is_ca":false},{"name":"D. Descamps","is_ca":false},{"name":"Judith Hill","is_ca":false},{"name":"Corinne Vandermeulen","is_ca":false},{"name":"Veronica Hulstrøm","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01018902985923896,"gpt":0.2839127267934928,"spread":0.2737236969342538,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.002234949,0.001367353,0.002078686,0.0008366109,0.001459853,0.000857858,0.001285544,0.0005198094,0.00118417],"category_scores_gemma":[0.003006469,0.001038816,0.001419884,0.001244825,0.0007606441,0.0009268168,0.0006788543,0.002874212,0.0003195847],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003708459,"about_ca_system_score_gemma":0.006531669,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00291821,"about_ca_topic_score_gemma":0.004918754,"domain_scores_codex":[0.9899949,0.002280765,0.002673365,0.0009636237,0.00185264,0.002234667],"domain_scores_gemma":[0.9932801,0.001333956,0.001430008,0.001233579,0.0009419349,0.001780407],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.008805964,0.003912694,0.7633791,0.003376276,0.00675839,0.008398892,0.02671956,0.0006037545,0.004861835,0.0002182986,0.08996474,0.08300052],"study_design_scores_gemma":[0.02338392,0.02011877,0.8035179,0.03249249,0.01755395,0.01366222,0.008872536,0.003402355,0.01032931,0.003792747,0.05901989,0.003853871],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9373719,0.04972459,0.0008793517,0.004386391,0.002389197,0.002780949,0.001042801,0.000321499,0.001103391],"genre_scores_gemma":[0.9857873,0.005155561,0.0001866376,0.003002769,0.004270714,0.0001643823,0.00002702912,0.000308053,0.001097576],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07914665,"threshold_uncertainty_score":0.9999077,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W4211077933","doi":"10.1016/j.bjid.2021.101719","title":"TROCA PARA A COMBINAÇÃO DE DOSE FIXA DE DOLUTEGRAVIR/LAMIVUDINA É NÃO INFERIOR A UM REGIME BASEADO EM TENOFOVIR ALAFENAMIDA NA MANUTENÇÃO DA SUPRESSÃO VIROLÓGICA POR 144 SEMANAS (ESTUDO TANGO)","year":2022,"lang":"pt","type":"article","venue":"The Brazilian Journal of Infectious Diseases","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Dolutegravir; Physics; Medicine; Human immunodeficiency virus (HIV); Tenofovir; Gynecology; Antiretroviral therapy; Viral load; Virology","authors":[{"name":"Olayemi Osiyemi","is_ca":false},{"name":"Faïza Ajana","is_ca":false},{"name":"Fiona Bisshop","is_ca":false},{"name":"Stéphane De Wit","is_ca":false},{"name":"Joaquín Portilla","is_ca":false},{"name":"Jean‐Pierre Routy","is_ca":true},{"name":"Christoph Wyen","is_ca":false},{"name":"Mounir Ait‐Khaled","is_ca":false},{"name":"Keith A. Pappa","is_ca":false},{"name":"Ruolan Wang","is_ca":false},{"name":"Peter A. Leone","is_ca":false},{"name":"Jonathan Wright","is_ca":false},{"name":"Brian Wynne","is_ca":false},{"name":"Jean van Wyk","is_ca":false},{"name":"Michael Aboud","is_ca":false},{"name":"Kimberly Y. Smith","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01317014428473982,"gpt":0.2632483646088911,"spread":0.2500782203241512,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001810667,0.001234677,0.001887913,0.0009096647,0.002157994,0.0003887727,0.001261449,0.0002331559,0.002383673],"category_scores_gemma":[0.0006464964,0.0009384677,0.001416053,0.001252602,0.0005098978,0.0004955056,0.0006507319,0.001901799,0.000197063],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002698179,"about_ca_system_score_gemma":0.003131223,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001934591,"about_ca_topic_score_gemma":0.0001199339,"domain_scores_codex":[0.9916989,0.001973841,0.001867417,0.000818627,0.001810388,0.001830832],"domain_scores_gemma":[0.994003,0.0008914312,0.001733279,0.001284956,0.0004254261,0.001661901],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01087934,0.01620679,0.7884018,0.001018657,0.01154803,0.02482044,0.02528403,0.001314673,0.001467509,0.000600504,0.09908734,0.01937084],"study_design_scores_gemma":[0.04426687,0.01155914,0.8325481,0.002872703,0.01772295,0.01984716,0.02800135,0.002363447,0.0005663811,0.003449527,0.03381071,0.002991676],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.97539,0.01133463,0.0003532866,0.008711343,0.0009802049,0.001830553,0.0004716238,0.0002070963,0.0007213101],"genre_scores_gemma":[0.9787037,0.001334688,0.0001391602,0.001848796,0.0006422137,0.000298489,0.0001248897,0.0002177594,0.0166903],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06527663,"threshold_uncertainty_score":0.9993066,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}