{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":7,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":7,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"97c4d6163956","filters":{"venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)"}},"results":[{"id":"W4226318631","doi":"","title":"Relating multivariate shapes to genescapes using phenotype-biological process associations for craniofacial shape.","year":2021,"lang":"en","type":"article","venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)","topic":"Morphological variations and asymmetry","field":"Mathematics","cited_by":9,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Alberta Children's Hospital; University of Alberta; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Craniofacial; Multivariate statistics; Phenotype; Biology; Gene; Trait; Computational biology; Multivariate analysis; Leverage (statistics); Quantitative trait locus; Variation (astronomy); Evolutionary biology; Genetics; Computer science; Artificial intelligence; Machine learning","authors":[{"name":"J. David Aponte","is_ca":true},{"name":"David C. Katz","is_ca":true},{"name":"Daniela M. Roth","is_ca":true},{"name":"Marta Vidal‐García","is_ca":true},{"name":"Wei Liu","is_ca":true},{"name":"Fernando Andrade","is_ca":false},{"name":"Charles C. Roseman","is_ca":false},{"name":"James M. Cheverud","is_ca":false},{"name":"Daniel Graf","is_ca":true},{"name":"Ralph Marcucio","is_ca":false},{"name":"Benedikt Hallgrímsson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07767866765069927,"gpt":0.3245741312488226,"spread":0.2468954635981233,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009035105,0.0003096872,0.0004081196,0.00005402257,0.001405027,0.0001782516,0.0005095931,0.0002475351,0.001138675],"category_scores_gemma":[0.002349873,0.0001801481,0.0001812376,0.0009929793,0.00008376857,0.0002896156,0.0003526451,0.0003060627,0.00009828321],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001104269,"about_ca_system_score_gemma":0.0001715364,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005379371,"about_ca_topic_score_gemma":0.000009882553,"domain_scores_codex":[0.997534,0.0005831464,0.0005759255,0.0004953648,0.000324369,0.0004872176],"domain_scores_gemma":[0.996987,0.001762924,0.0003434604,0.0004512403,0.0003264498,0.0001288957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0007320668,0.001851743,0.009889863,0.0003025387,0.0009956725,0.00005805638,0.008400144,0.006571619,0.477057,0.39301,0.09717473,0.003956594],"study_design_scores_gemma":[0.01156963,0.001067166,0.07222159,0.0006270136,0.002008781,0.00007888124,0.01057935,0.2190932,0.161991,0.3300931,0.18409,0.006580342],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9685776,0.0001991661,0.0180004,0.01032834,0.000283825,0.001117717,0.0006168905,0.0002929337,0.0005831783],"genre_scores_gemma":[0.9469686,0.00002624257,0.04346606,0.005824264,0.0008320956,0.000263362,0.00009787819,0.0001284726,0.002393047],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.315066,"threshold_uncertainty_score":0.999895,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W7075671580","doi":"","title":"A Dominant Mutation in Hexokinase 1 (HK1) Causes Retinitis Pigmentosa.","year":2014,"lang":"en","type":"article","venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)","topic":"Diverse Scientific and Economic Studies","field":"Economics, Econometrics and Finance","cited_by":5,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Mutation; Frameshift mutation; TSG101; Glycogen storage disease; Context (archaeology)","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.01782988482952919,"gpt":0.193483885726288,"spread":0.1756540008967588,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001525807,0.0002350696,0.0003935675,0.0001778152,0.0004526687,0.0001730781,0.0005200313,0.00008411509,0.00375719],"category_scores_gemma":[0.0001973779,0.0001710494,0.00009892108,0.0005571125,0.0003034682,0.0005479351,0.0002959744,0.000184292,0.009384433],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000141456,"about_ca_system_score_gemma":0.00002776101,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001309338,"about_ca_topic_score_gemma":0.0001086248,"domain_scores_codex":[0.9981979,0.000149606,0.0006351832,0.0005167618,0.00007347279,0.0004270502],"domain_scores_gemma":[0.9985336,0.0002361133,0.0003989126,0.0007267225,0.00002724655,0.00007736991],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002756425,0.0002343779,0.02073159,0.00006157678,0.0001418657,0.00003241664,0.008135397,0.0005888176,0.0004404667,0.1562049,0.812027,0.00112594],"study_design_scores_gemma":[0.001484772,0.00009863546,0.01032042,0.00003746278,0.00001757683,0.000005720381,0.001321175,0.001816503,0.003833513,0.007224408,0.9733528,0.0004870226],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9143402,0.001827927,0.0000915358,0.009510853,0.001959339,0.000585868,0.0005729481,0.0001077953,0.07100356],"genre_scores_gemma":[0.9197757,0.0004247663,0.00006426173,0.002122099,0.0001509998,0.00008490397,0.00002516978,0.00004590737,0.07730624],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1613258,"threshold_uncertainty_score":0.9971535,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W6884628063","doi":"10.1111/acel.12170/abstract","title":"Acarbose, 17-α-estradiol, and nordihydroguaiaretic acid extend mouse lifespan preferentially in males.","year":2014,"lang":"en","type":"article","venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)","topic":"Menopause: Health Impacts and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Institute of Aging","funders":"","keywords":"Nordihydroguaiaretic acid; Sexual dimorphism; Acarbose; Longevity; Ageing; Senescence","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.01707108132513107,"gpt":0.256434740818678,"spread":0.2393636594935469,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006921571,0.0004654119,0.0005841162,0.0001577474,0.0003672578,0.0001067044,0.0003541043,0.0002121549,0.0004704872],"category_scores_gemma":[0.0001335717,0.0002602507,0.00003332556,0.0005143129,0.0003256983,0.0003910788,0.0002225405,0.0005552389,0.0001618951],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001410314,"about_ca_system_score_gemma":0.000237588,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005498448,"about_ca_topic_score_gemma":0.00009925948,"domain_scores_codex":[0.9970515,0.000624606,0.0005753895,0.000543947,0.0004724099,0.0007320809],"domain_scores_gemma":[0.9977623,0.0002341265,0.0002360815,0.001195422,0.00005782069,0.0005142734],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0136439,0.003704764,0.2104996,0.002626219,0.00171349,0.0005617696,0.01063706,0.000255683,0.5595444,0.007994178,0.1590413,0.02977763],"study_design_scores_gemma":[0.03444168,0.01093171,0.4077504,0.001227361,0.001551579,0.0003663382,0.0005422306,0.003361407,0.1767603,0.001528623,0.3591242,0.00241416],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9813267,0.002156209,0.00001929205,0.01278107,0.00016994,0.001221436,0.00008286651,0.0001932507,0.002049213],"genre_scores_gemma":[0.984571,0.000796897,0.0001293215,0.005115261,0.0002584689,0.00008647168,0.00006171389,0.0001153466,0.008865491],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.382784,"threshold_uncertainty_score":0.999985,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W6959457806","doi":"10.1111/j.1365-2265.2004.01952.x/abs","title":"Hypertriglyceridaemia in Alstrom's syndrome: causes and associations in 37 cases.","year":2004,"lang":"en","type":"article","venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Diabetes mellitus; Insulin; Triglycerides blood; Hyperinsulinemia; Tubulopathy","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.007242927539175155,"gpt":0.2189808056686774,"spread":0.2117378781295023,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002266137,0.0002043763,0.0001902798,0.0000523649,0.0001797877,0.00005088323,0.0002668133,0.0001411618,0.00004254477],"category_scores_gemma":[0.0001676394,0.0001383797,0.00005052065,0.0003660906,0.0001743927,0.00002153992,0.0002220004,0.0001544885,0.00002541796],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006529553,"about_ca_system_score_gemma":0.0002615827,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009642354,"about_ca_topic_score_gemma":0.0002789007,"domain_scores_codex":[0.9987196,0.0002221342,0.0002643075,0.0003222405,0.0001558706,0.0003158277],"domain_scores_gemma":[0.9992432,0.00006105603,0.00009348807,0.0004628122,0.00002942896,0.0001100134],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006394081,0.0006987309,0.1816681,0.00008776264,0.0002200684,0.000561356,0.001166666,0.003676103,0.7657729,0.0006872197,0.04431834,0.0005033393],"study_design_scores_gemma":[0.004573497,0.000493773,0.6970727,0.0001030935,0.00009246171,0.0002109696,0.0008513825,0.00004040176,0.2484585,0.0008150497,0.04643564,0.0008525887],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916053,0.00349694,0.00000592584,0.004101047,0.0000832414,0.0003282745,0.0001979664,0.00002451463,0.0001567842],"genre_scores_gemma":[0.9966323,0.0006716845,0.00005404494,0.001776628,0.00006002561,0.00005261646,0.00008777183,0.00003635989,0.0006286087],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5173144,"threshold_uncertainty_score":0.5642959,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W7073700607","doi":"","title":"Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes.","year":2015,"lang":"en","type":"article","venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)","topic":"Glass properties and applications","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Annotation; Pseudogene; Genome; Gene; Gene prediction; Genome project; Gene Annotation; Quality (philosophy)","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.0425519911457191,"gpt":0.2667148887256967,"spread":0.2241628975799776,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00122417,0.0002414956,0.0002983262,0.00003081828,0.0009684008,0.0002980585,0.0007558909,0.00008623499,0.00005754392],"category_scores_gemma":[0.00008521986,0.0001051058,0.0000592813,0.0004750018,0.0007003524,0.0006532964,0.0005782054,0.0001441993,0.0000250129],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004366539,"about_ca_system_score_gemma":0.0002462567,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000298091,"about_ca_topic_score_gemma":0.00004073555,"domain_scores_codex":[0.9976027,0.0007965331,0.0005656045,0.0003601512,0.0003836088,0.0002913772],"domain_scores_gemma":[0.9978484,0.0001915868,0.0004496827,0.00115089,0.0002297013,0.0001297625],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009242227,0.0000240873,0.00007398396,0.00002921711,0.00003033731,3.412502e-7,0.001507326,0.002088075,0.9863848,0.002680466,0.00685634,0.0002326146],"study_design_scores_gemma":[0.003566509,0.0001543815,0.009142722,0.000134998,0.0005787822,0.00005826628,0.004469734,0.08312292,0.7920074,0.01429052,0.09134126,0.001132524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9733141,0.006429413,0.0008315563,0.01779793,0.0001794268,0.0009275916,0.0003094656,0.0001675577,0.0000429442],"genre_scores_gemma":[0.9951162,0.0003618701,0.0005599684,0.002055835,0.000116726,0.000041506,0.000009540717,0.0000450147,0.001693367],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1943774,"threshold_uncertainty_score":0.7448254,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W6940825646","doi":"10.1111/cei.12465/abstract","title":"Generation of β cell-specific human cytotoxic T cells by lentiviral transduction and their survival in immunodeficient human leucocyte antigen-transgenic mice.","year":2015,"lang":"en","type":"article","venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Calgary","funders":"","keywords":"Cytotoxic T cell; CD8; T cell; Antigen; Major histocompatibility complex; T-cell receptor; Antigen-presenting cell; Interleukin 21; Streptamer; Natural killer T cell","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.03307610205911599,"gpt":0.2135174816727112,"spread":0.1804413796135952,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005897428,0.0002451739,0.0002476819,0.00003368164,0.0004933925,0.00009886592,0.0003543721,0.0001171578,0.0007349802],"category_scores_gemma":[0.000004661045,0.00009158041,0.00009353567,0.0004826122,0.00007330771,0.000379154,0.00006263984,0.0002523476,0.00006268876],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004595948,"about_ca_system_score_gemma":0.0000156637,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002639926,"about_ca_topic_score_gemma":0.0002836147,"domain_scores_codex":[0.9981499,0.000598575,0.0004099073,0.0003277064,0.0002320518,0.0002818434],"domain_scores_gemma":[0.9992805,0.0002353222,0.0001739554,0.000175222,0.00005848507,0.00007650101],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008354119,0.0001211578,0.0009033136,0.000005325276,0.00001014347,5.283543e-7,0.0008155209,0.00005817252,0.9725206,0.0001986982,0.02512232,0.0001606015],"study_design_scores_gemma":[0.0002274743,0.0002299902,0.001408901,0.00002062663,0.0000110389,0.00000268862,0.0009604772,0.0001140119,0.9379904,0.00007821999,0.05873171,0.000224419],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934599,0.003268583,0.00001250055,0.0008292968,0.0004476234,0.0004170468,0.001094567,0.00005449068,0.0004159913],"genre_scores_gemma":[0.9966484,0.001375017,0.000005900409,0.0001034801,0.0001997541,0.00001760094,0.0007025387,0.000006177169,0.0009411822],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03453023,"threshold_uncertainty_score":0.8047518,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W7073902364","doi":"","title":"Adenomatous hyperplasia of the thyroid gland in beluga whales (Delphinapterus leucas) from the St. Lawrence Estuary and Hudson Bay, Quebec, Canada.","year":2003,"lang":"en","type":"article","venue":"The Mouseion at the JAXlibrary (Jackson Laboratory)","topic":"Diverse Scientific and Economic Studies","field":"Economics, Econometrics and Finance","cited_by":0,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Beluga Whale; Beluga; Estuary; Thyroid; Bay; Hyperplasia","authors":[],"retraction":null,"screen_n_in":null,"score":{"opus":0.0133537763474967,"gpt":0.1701065278932699,"spread":0.1567527515457732,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008183323,0.0002724916,0.0004357083,0.00005110085,0.0005887902,0.0001416958,0.0009079653,0.00008641697,0.0009534556],"category_scores_gemma":[0.0001383221,0.0001507901,0.00007964652,0.0004443805,0.0005401368,0.0003857822,0.0004005673,0.0002705932,0.0001622034],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001478313,"about_ca_system_score_gemma":0.0001930796,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.08253981,"about_ca_topic_score_gemma":0.4030935,"domain_scores_codex":[0.9982149,0.0002172033,0.0005974424,0.0004816258,0.0001127643,0.0003760876],"domain_scores_gemma":[0.9980621,0.0004509896,0.0004402058,0.0009540885,0.00002466151,0.00006791082],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001017873,0.00008903104,0.3467357,0.00002679665,0.0001832036,0.00001212503,0.005201835,0.000306297,0.000119976,0.04196853,0.605036,0.0002187297],"study_design_scores_gemma":[0.001262461,0.0000369481,0.209632,0.00007017004,0.00004319961,0.000009438131,0.006186541,0.000346745,0.001482464,0.004026191,0.7763603,0.0005435214],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9663082,0.0141133,0.000003245431,0.008458364,0.001119558,0.0004091527,0.001373268,0.00002319858,0.008191693],"genre_scores_gemma":[0.9795031,0.001097534,0.00002158988,0.001696668,0.0000667441,0.00002637216,0.000009837348,0.00003200517,0.01754617],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3205536,"threshold_uncertainty_score":0.9999598,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}