{"meta":{"page":1,"per_page":50,"max_per_page":100,"total":77,"total_is_capped":false,"direct_labels_cover":0,"predictions_cover":77,"direct_label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline (scores rank; they never assert a category)","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12","author_layer_release":"2026-06-26"},"query_hash":"a78a4b7fe5ad","filters":{"venue":"Virus Genes"}},"results":[{"id":"W1988218537","doi":"10.1007/s11262-009-0360-3","title":"Genomic characterization of swine caliciviruses representing a new genus of Caliciviridae","year":2009,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"ORFS; Biology; Caliciviridae; Capsid; Genome; Phylogenetic tree; Feline calicivirus; Calicivirus; Genetics; Subfamily; Open reading frame; Homology (biology); Phylogenetics; Gene; Virology; Norovirus; Virus; Peptide sequence","authors":[{"name":"Yvan L’Homme","is_ca":true},{"name":"Raphaël Sansregret","is_ca":true},{"name":"Étienne Plante-Fortier","is_ca":true},{"name":"Anne-Marie Lamontagne","is_ca":true},{"name":"Mourad Ouardani","is_ca":true},{"name":"Geneviève Lacroix","is_ca":true},{"name":"Carole Simard","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04043326549162512,"gpt":0.3241010357281843,"spread":0.2836677702365591,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001906731,0.0003195017,0.0003379084,0.0006711828,0.0004079717,0.0005749273,0.0002344868,0.0004273413,0.0009084144],"category_scores_gemma":[0.0006645521,0.0001943647,0.0005232383,0.0005064334,0.0004208227,0.0002814769,0.0002692031,0.001024692,0.0003308204],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000500919,"about_ca_system_score_gemma":0.0004910455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001712657,"about_ca_topic_score_gemma":0.00267674,"domain_scores_codex":[0.9998705,0.00001667354,0.000009420825,0.00004364995,0.00002834295,0.00003130715],"domain_scores_gemma":[0.9994702,0.0001752245,0.00009656599,0.00006129024,0.00008966405,0.0001070536],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002473858,0.00006287147,0.00396987,0.00004766575,0.00001682092,0.0002227434,0.0001708958,0.0001251729,0.9915165,0.0002706972,0.00008460886,0.003264883],"study_design_scores_gemma":[0.0002252929,0.002686976,0.513401,0.000166125,0.0004058197,0.005694562,0.00200004,0.008220617,0.4355763,0.001945143,0.02960706,0.00007106254],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938187,0.0004812562,0.003016663,0.0001057303,0.00004160653,0.00005912669,0.001140844,0.00001875847,0.001317277],"genre_scores_gemma":[0.9828851,0.0003966246,0.006271517,0.0002533495,0.0000433542,0.00003644215,0.009009813,0.00002624006,0.001077618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001712657,"threshold_uncertainty_score":0.003634453,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1601516424","doi":"10.1023/a:1022326021195","title":"Evolution of North American PVYNTN Strain Tu 660 from Local PVYN by Mutation rather than Recombination","year":2003,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":75,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Potato virus Y; Biology; Potyvirus; Inoculation; Recombination; Virology; Strain (injury); Phylogenetic tree; Potyviridae; Homology (biology); Genetics; Virus; Plant virus; Gene; Horticulture","authors":[{"name":"Xianzhou Nie","is_ca":true},{"name":"R. P. Singh","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02144208109831839,"gpt":0.2416202398148887,"spread":0.2201781587165703,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003950939,0.0003623497,0.0002747749,0.0004961613,0.0007618872,0.0005549142,0.0004948642,0.0005361765,0.001400428],"category_scores_gemma":[0.0004110924,0.0002250129,0.0002780904,0.0004658627,0.000448549,0.0003908322,0.0008068387,0.001227461,0.0004451282],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001169419,"about_ca_system_score_gemma":0.0007464521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009543886,"about_ca_topic_score_gemma":0.01752677,"domain_scores_codex":[0.9998229,0.00003485651,0.000009191191,0.00005097437,0.00002546822,0.00005665708],"domain_scores_gemma":[0.9998028,0.00004985518,0.00003786306,0.00002965555,0.00002922027,0.00005059683],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005174896,0.0001379772,0.01568007,0.00006586126,0.00003057495,0.0004917813,0.0007258314,0.0006762641,0.9648839,0.001389706,0.0002805211,0.01512002],"study_design_scores_gemma":[0.0001854781,0.001695447,0.5116234,0.000140016,0.0003500064,0.007600219,0.005190819,0.007408699,0.4261954,0.001776229,0.03766993,0.0001643505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970834,0.00007514967,0.0004974047,0.00003147408,0.00001269769,0.00001114084,0.00005415456,0.000009432611,0.002225159],"genre_scores_gemma":[0.9950911,0.0001582277,0.001133348,0.00009446252,0.000006377269,0.00002183837,0.0003788006,0.00004904017,0.003066792],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009543886,"threshold_uncertainty_score":0.01897669,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2050369224","doi":"10.1007/s11262-008-0227-z","title":"Swine infection with H9N2 influenza viruses in China in 2004","year":2008,"lang":"en","type":"article","venue":"Virus Genes","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Key Research and Development Program of China; Program for New Century Excellent Talents in University; Canadian Institutes of Health Research","keywords":"Biology; Virology; Neuraminidase; H5N1 genetic structure; Influenza A virus subtype H5N1; Antigenicity; Phylogenetic tree; Population; Antigenic drift; Virus; Reassortment; Hemagglutinin (influenza); Gene; Antigen; Genetics; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Medicine","authors":[{"name":"Yanlong Cong","is_ca":false},{"name":"Chunfeng Wang","is_ca":false},{"name":"Chunmei Yan","is_ca":false},{"name":"Jinshan Peng","is_ca":false},{"name":"Zhan-Lei Jiang","is_ca":false},{"name":"Jinhua Liu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0947513293894521,"gpt":0.3702563138027472,"spread":0.2755049844132951,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006448802,0.0003884235,0.0003525223,0.001155542,0.001198229,0.0005117901,0.000438719,0.0005928956,0.0006234861],"category_scores_gemma":[0.0004188378,0.0003654947,0.0003548123,0.001185677,0.000563002,0.0005501835,0.0004276749,0.0004386693,0.00007266242],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003919702,"about_ca_system_score_gemma":0.003450081,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1965188,"about_ca_topic_score_gemma":0.3181014,"domain_scores_codex":[0.9996958,0.00004167796,0.00002644442,0.0000481038,0.00006131484,0.0001266054],"domain_scores_gemma":[0.9995536,0.00003197953,0.0001086393,0.00001579472,0.0001291598,0.000160741],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002300232,0.00005830381,0.9908757,0.00002794067,0.00006332592,0.0009710025,0.001077374,0.0001713871,0.002768971,0.0001097554,0.0005610524,0.003085144],"study_design_scores_gemma":[0.0000054246,0.0001108834,0.9974387,0.000005192872,0.00002062563,0.0002228021,0.001152726,0.0001529847,0.0002138735,0.00001783268,0.0006528505,0.000006046871],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985797,0.0002367316,0.00007701757,0.0001793233,0.00002537724,0.00001480806,0.0002241556,0.000002823173,0.0006600576],"genre_scores_gemma":[0.9978549,0.00019864,0.00007051968,0.000124103,0.00002305785,0.000007914609,0.0005386982,0.000001102135,0.00118112],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1965188,"threshold_uncertainty_score":0.3907499,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1980827162","doi":"10.1007/s11262-014-1156-7","title":"Comparative analysis of the complete genome sequences of Kenyan African swine fever virus isolates within p72 genotypes IX and X","year":2015,"lang":"en","type":"article","venue":"Virus Genes","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":60,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Commonwealth Scientific and Industrial Research Organisation; Eli Lilly and Company","keywords":"Biology; Genome; ORFS; Genetics; Genotype; African swine fever virus; Gene; Virology; Whole genome sequencing; Open reading frame; Peptide sequence","authors":[{"name":"Richard P. Bishop","is_ca":false},{"name":"Clare Fleischauer","is_ca":true},{"name":"Etienne P. de Villiers","is_ca":false},{"name":"Edward Okoth","is_ca":false},{"name":"Carmina Gallardo","is_ca":false},{"name":"Chris Upton","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09969782286109191,"gpt":0.2751787914964813,"spread":0.1754809686353894,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001542632,0.0003858243,0.0003855202,0.001004833,0.0006597571,0.0003656564,0.0002423382,0.000373646,0.002763087],"category_scores_gemma":[0.0004812193,0.0001761166,0.0005430495,0.001140956,0.0002585087,0.0002407214,0.0002370589,0.0006114443,0.0006080043],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004249302,"about_ca_system_score_gemma":0.0004821695,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003702958,"about_ca_topic_score_gemma":0.007440265,"domain_scores_codex":[0.9998693,0.00001873599,0.000009368187,0.00003356291,0.00002755239,0.00004135055],"domain_scores_gemma":[0.999632,0.0001241639,0.00008553117,0.0000227672,0.00006038261,0.00007505412],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001413293,0.00008383494,0.004478618,0.0003161445,0.00006227245,0.0004987055,0.0005188623,0.0002629957,0.9855908,0.0002819783,0.000314443,0.006177971],"study_design_scores_gemma":[0.0001713563,0.002224446,0.7688007,0.0002034002,0.0005036662,0.004114799,0.001760753,0.001874612,0.1881665,0.0004110927,0.03170136,0.00006730187],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9903937,0.001233342,0.001208568,0.00005458685,0.00002732355,0.00005126924,0.005180361,0.00002423298,0.001826741],"genre_scores_gemma":[0.9586999,0.001226002,0.006676531,0.0001508543,0.00003486275,0.00009545177,0.0309436,0.00004529717,0.002127468],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003702958,"threshold_uncertainty_score":0.009243488,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1982935470","doi":"10.1007/s11262-007-0109-9","title":"Induction of chromosomally integrated HIV-1 LTR requires RBF-2 (USF/TFII-I) and RAS/MAPK signaling","year":2007,"lang":"en","type":"article","venue":"Virus Genes","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of British Columbia","funders":"U.S. Forest Service","keywords":"NFAT; Ionomycin; Biology; MAPK/ERK pathway; Calcineurin; Cell biology; Signal transduction; Molecular biology; Transcription factor; Gene; Genetics; Transplantation; Intracellular; Medicine","authors":[{"name":"Tom Malcolm","is_ca":true},{"name":"Jiguo Chen","is_ca":true},{"name":"Carol Chang","is_ca":true},{"name":"Ivan Sadowski","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02207291048028189,"gpt":0.2706088865851239,"spread":0.248535976104842,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003093162,0.0007092607,0.0003027528,0.0005498653,0.0003962449,0.0008220667,0.0003795884,0.0005119847,0.003315127],"category_scores_gemma":[0.0002784886,0.0003115809,0.0007063409,0.000229494,0.0004541174,0.000440347,0.0006104061,0.00153104,0.001273667],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001094077,"about_ca_system_score_gemma":0.0003994731,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001407743,"about_ca_topic_score_gemma":0.002356589,"domain_scores_codex":[0.9994866,0.00008250628,0.00003257893,0.0001025474,0.0001127006,0.0001830648],"domain_scores_gemma":[0.9997037,0.00007147543,0.00005946467,0.00005314015,0.00003444467,0.00007771974],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001344871,0.0000377317,0.0001108381,0.00002164141,0.000002875818,0.00002775443,0.00001528403,0.0000266033,0.9982677,0.0002396686,0.00006118842,0.001054266],"study_design_scores_gemma":[0.0000117328,0.00009424828,0.002089562,0.000005140109,0.00000598065,0.0001001941,0.000031197,0.0004648968,0.995864,0.00005141607,0.001278475,0.000003200918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9773101,0.003841867,0.009671112,0.0004562869,0.0001900429,0.0000987831,0.001860509,0.0008305233,0.005740883],"genre_scores_gemma":[0.9876125,0.0004188238,0.003955267,0.00009000052,0.00002712838,0.00004412733,0.001559561,0.00008695938,0.006205643],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003315127,"threshold_uncertainty_score":0.01109016,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2090839441","doi":"10.1007/s11262-004-2197-0","title":"Genome Sequences and Structures of Two Biologically Distinct Strains of Grapevine leafroll-associated virus 2 and Sequence Analysis","year":2005,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"University of California, Davis; University of Guelph; U.S. Department of Agriculture","keywords":"Biology; Closterovirus; Vitis vinifera; Genome; Virology; Strain (injury); Virus; Rootstock; Gene; Genotype; Genetics; Botany","authors":[{"name":"Baozhong Meng","is_ca":true},{"name":"Caihong Li","is_ca":false},{"name":"D. E. Goszczynski","is_ca":false},{"name":"Dennis Gonsalves","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05387901990620372,"gpt":0.2938577584520199,"spread":0.2399787385458162,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001407448,0.0004889749,0.0003334148,0.000596666,0.0004280754,0.0005179413,0.0003243987,0.0005697702,0.0006964699],"category_scores_gemma":[0.0003238849,0.000308724,0.0005586203,0.0003851716,0.0004117232,0.0002251025,0.0002494115,0.0008787535,0.0003616347],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007448327,"about_ca_system_score_gemma":0.0004560715,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004814495,"about_ca_topic_score_gemma":0.006037258,"domain_scores_codex":[0.9998777,0.00001746987,0.00001084224,0.00004434882,0.00002475675,0.00002480548],"domain_scores_gemma":[0.9996917,0.00009587387,0.0000533358,0.00003085485,0.0000396364,0.00008849245],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004110771,0.00008329883,0.002190397,0.00006169427,0.00001673671,0.0001774496,0.0003023282,0.0001692703,0.9950835,0.0002352158,0.00007912942,0.001190063],"study_design_scores_gemma":[0.0003023058,0.00272089,0.6478049,0.0000726042,0.0003799407,0.003775035,0.001924556,0.002677484,0.3203518,0.001269624,0.01861012,0.0001106473],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956259,0.000731298,0.0008442387,0.00007196207,0.00002751378,0.0000511037,0.001315895,0.00001527949,0.001316852],"genre_scores_gemma":[0.9760764,0.0007095044,0.003801649,0.0002506404,0.00003962668,0.00008474435,0.01635175,0.00003493348,0.002650773],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004814495,"threshold_uncertainty_score":0.009572983,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2066521545","doi":"10.1007/s11262-007-0194-9","title":"Sequence comparison of the right end of fowl adenovirus genomes","year":2008,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Fowl; Genome; Evolutionary biology; Sequence (biology); Zoology; Genetics; Ecology; Gene","authors":[{"name":"Juan Carlos Corredor","is_ca":true},{"name":"Amalia Garceac","is_ca":true},{"name":"Peter J. Krell","is_ca":true},{"name":"Éva Nagy","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02814100490187011,"gpt":0.2939591740326044,"spread":0.2658181691307342,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001541679,0.0004165981,0.0005170709,0.0008621164,0.0004573842,0.0005561114,0.000269711,0.0004187955,0.002702781],"category_scores_gemma":[0.0004338998,0.0002092269,0.0007567692,0.0003496609,0.0002262393,0.0002145372,0.0001737383,0.0008209699,0.0013208],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000632844,"about_ca_system_score_gemma":0.0004862084,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002809886,"about_ca_topic_score_gemma":0.003307565,"domain_scores_codex":[0.9998459,0.0000203629,0.00001428637,0.00004612791,0.00003357118,0.00003973358],"domain_scores_gemma":[0.9994276,0.0001815619,0.00007499541,0.00004976437,0.0001234874,0.000142754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000603262,0.00003916048,0.0007634151,0.0001473042,0.00001457564,0.0002575915,0.0001015449,0.0000864395,0.9943152,0.0003027278,0.0001333488,0.003235436],"study_design_scores_gemma":[0.00007166347,0.0009650215,0.08215908,0.00009949962,0.0002010235,0.002430338,0.0003979624,0.001814716,0.8795848,0.0003003203,0.03192093,0.00005471209],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9785755,0.002769276,0.008833216,0.0001770346,0.0002216709,0.00008472974,0.005270997,0.0001127956,0.003954799],"genre_scores_gemma":[0.9288352,0.001681892,0.02515554,0.0003960299,0.0000982371,0.00009862103,0.03343413,0.0001397096,0.01016063],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002809886,"threshold_uncertainty_score":0.009041667,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2024852465","doi":"10.1007/s11262-010-0560-x","title":"Characterization of indels in poxvirus genomes","year":2010,"lang":"en","type":"article","venue":"Virus Genes","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Indel; Genome; Phylogenetic tree; Genetics; Vaccinia; Virology; Recombination; Phylogenetics; Modified vaccinia Ankara; Virus; DNA; Gene; Genotype; Recombinant DNA","authors":[{"name":"Danielle Coulson","is_ca":true},{"name":"Chris Upton","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01506355217470068,"gpt":0.2596332648159576,"spread":0.2445697126412569,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002690802,0.0002473812,0.0003677925,0.001258008,0.000497759,0.0004917563,0.0002993057,0.0004925186,0.00167045],"category_scores_gemma":[0.001365678,0.0002025933,0.0005061122,0.0008136534,0.0003795119,0.00038207,0.0003166116,0.00114251,0.0004016487],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002210243,"about_ca_system_score_gemma":0.0001948843,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006124554,"about_ca_topic_score_gemma":0.001061227,"domain_scores_codex":[0.999774,0.00003439916,0.00002201135,0.00006843798,0.00006891564,0.0000322393],"domain_scores_gemma":[0.9986709,0.0006444227,0.0002827311,0.0001211905,0.0001165838,0.0001642239],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006983017,0.00009517256,0.01198375,0.0001209958,0.00005968802,0.0007445192,0.0003680333,0.0003870555,0.9782486,0.0002761189,0.00006697875,0.006950786],"study_design_scores_gemma":[0.00008724402,0.001140418,0.4083154,0.00007729922,0.0003541304,0.007260185,0.000713814,0.004396802,0.5682018,0.0008285522,0.008569025,0.00005534404],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955818,0.0003296274,0.002567004,0.00003797425,0.00001562818,0.00003625259,0.0005796041,0.00003161085,0.0008204159],"genre_scores_gemma":[0.9911738,0.0002257206,0.005007947,0.00008620077,0.0000261298,0.00003834047,0.002286493,0.00004740533,0.001107997],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00167045,"threshold_uncertainty_score":0.005588233,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2034253101","doi":"10.1007/s11262-013-0995-y","title":"Comparison of fiber gene sequences of inclusion body hepatitis (IBH) and non-IBH strains of serotype 8 and 11 fowl adenoviruses","year":2013,"lang":"en","type":"article","venue":"Virus Genes","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"Biology; Serotype; Virology; Capsid; Virulence; Gene; Virus; Mastadenovirus; Genetics; Adenoviridae; Genetic enhancement","authors":[{"name":"Helena Grgić","is_ca":true},{"name":"Peter J. Krell","is_ca":true},{"name":"Éva Nagy","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02449572496392644,"gpt":0.3244461749599834,"spread":0.299950449996057,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001634112,0.0003511144,0.0003334621,0.000587045,0.0002222082,0.0002955113,0.0002193165,0.0002685484,0.001041795],"category_scores_gemma":[0.0005309244,0.0001584586,0.000485884,0.0003793907,0.0002410859,0.0001760918,0.0001221662,0.0004840043,0.0004426309],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000360254,"about_ca_system_score_gemma":0.0003202271,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001972724,"about_ca_topic_score_gemma":0.002021844,"domain_scores_codex":[0.9998788,0.00001777654,0.00001363271,0.00002953483,0.00002964143,0.00003058988],"domain_scores_gemma":[0.9990386,0.0003504372,0.0001884068,0.00007688729,0.0001956593,0.0001500753],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006759126,0.00006497018,0.002285325,0.00008473837,0.00001952404,0.0001577777,0.0001696916,0.00009073708,0.9943895,0.000176962,0.000032808,0.001852001],"study_design_scores_gemma":[0.00009392772,0.002882885,0.2424964,0.00008195819,0.0004087442,0.002390856,0.0009148744,0.002318358,0.7401271,0.0004159327,0.007819309,0.0000495447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975293,0.0002406081,0.001015157,0.00001868437,0.00001621929,0.00001536323,0.0005758947,0.000008408945,0.0005804094],"genre_scores_gemma":[0.9886667,0.0003877976,0.002873863,0.0000752023,0.00001725608,0.00003548249,0.006044568,0.00002522924,0.00187389],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001972724,"threshold_uncertainty_score":0.003922522,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1211553465","doi":"10.1023/a:1011110105819","title":"Identification and Characterization of Segments 3 and 4 of the ISAV Genome","year":2001,"lang":"en","type":"article","venue":"Virus Genes","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Fisheries and Oceans Canada; Ottawa Hospital; Research and Productivity Council","funders":"","keywords":"Biology; Identification (biology); Genome; Computational biology; Genetics; Evolutionary biology; Gene; Ecology","authors":[{"name":"Rachael J. Ritchie","is_ca":true},{"name":"Joël Heppell","is_ca":true},{"name":"Marcia Cook","is_ca":true},{"name":"Simon R. M. Jones","is_ca":true},{"name":"Steve Griffiths","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009886157087090973,"gpt":0.2200367735860918,"spread":0.2101506164990008,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001320482,0.0003786984,0.0002993922,0.0005044756,0.0002882853,0.0003757945,0.0002348936,0.0003937976,0.0008692266],"category_scores_gemma":[0.0003917924,0.0002014301,0.0005875225,0.0002595539,0.0003504768,0.0002806733,0.0002166438,0.0008779918,0.000494438],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004858236,"about_ca_system_score_gemma":0.0004797575,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00195131,"about_ca_topic_score_gemma":0.001886538,"domain_scores_codex":[0.9999211,0.00001270171,0.000003909282,0.0000155336,0.00001741936,0.00002938887],"domain_scores_gemma":[0.999745,0.00007865337,0.00006402296,0.00003848409,0.00003602148,0.00003797296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009075314,0.00001748231,0.0007331531,0.00002354778,0.000004651936,0.00004604635,0.00004134526,0.00009592839,0.9974121,0.0001442468,0.00002692744,0.001363907],"study_design_scores_gemma":[0.0000379501,0.0006726247,0.1159675,0.00002675654,0.0001213701,0.0009855732,0.0003410922,0.002380565,0.8656647,0.0008029505,0.01297389,0.00002509947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941509,0.0004939916,0.00334221,0.00009823952,0.00001499697,0.00002921229,0.0006966687,0.00003407689,0.001139653],"genre_scores_gemma":[0.9727209,0.0007417546,0.01084632,0.0001192757,0.00003275688,0.0000698066,0.01100001,0.00005398997,0.004415236],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00195131,"threshold_uncertainty_score":0.003879964,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1481087199","doi":"10.1023/a:1024451314534","title":"Detailed Computational Analysis of a Comprehensive Set of Group A Rotavirus NSP4 Proteins","year":2003,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Biology; Rotavirus; GenBank; Virology; Genetics; Genotype; Homology (biology); Peptide sequence; Gene; Virus","authors":[{"name":"Shuo Lin","is_ca":true},{"name":"Peng Tian","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01817386133082411,"gpt":0.2804559014025685,"spread":0.2622820400717444,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002467031,0.000917157,0.001157706,0.0007421806,0.001008921,0.000944247,0.0008328565,0.0006549722,0.002161307],"category_scores_gemma":[0.0006987376,0.0004814586,0.001345857,0.001096579,0.0002951433,0.0006449451,0.0002912018,0.0005748618,0.0003962955],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009529913,"about_ca_system_score_gemma":0.001960265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0095412,"about_ca_topic_score_gemma":0.01578933,"domain_scores_codex":[0.9998881,0.00002175548,0.000007358475,0.00002627748,0.00003446571,0.00002208774],"domain_scores_gemma":[0.9998131,0.00009957906,0.00001705104,0.00001987974,0.00003511086,0.0000152461],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0003410809,0.0002227814,0.006069075,0.0003344189,0.0002640111,0.0003557023,0.00005834702,0.9563909,0.01649498,0.004822728,0.002444453,0.01220147],"study_design_scores_gemma":[0.0000450587,0.00005180757,0.002095458,0.000006662798,0.00007763417,0.00004874972,0.00004424111,0.991069,0.003465772,0.002016557,0.001066809,0.00001223547],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9676459,0.0006641434,0.01799419,0.0002448451,0.00003136827,0.00005844336,0.00635537,0.001298526,0.00570705],"genre_scores_gemma":[0.9558575,0.0006117985,0.0266984,0.00007789837,0.0000196625,0.0001444333,0.01538906,0.000237203,0.0009639832],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0095412,"threshold_uncertainty_score":0.01897138,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2765564969","doi":"10.1007/s11262-017-1514-3","title":"Sera of Peruvians with fever of unknown origins include viral nucleic acids from non-vertebrate hosts","year":2017,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; University of Guelph; Blood Systems Research Institute","keywords":"Biology; Nucleic acid; Virology; Virus; Genome; Virus classification; Host (biology); RNA; Dengue fever; Metagenomics; Human virome; Vertebrate; Novel virus; Yellow fever; Gene; Genetics","authors":[{"name":"Tung Gia Phan","is_ca":false},{"name":"Juana del Valle-Mendoza","is_ca":false},{"name":"Mohammadreza Sadeghi","is_ca":false},{"name":"Eda Altan","is_ca":false},{"name":"Xutao Deng","is_ca":false},{"name":"Eric Delwart","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01508579737667687,"gpt":0.2878766728525986,"spread":0.2727908754759217,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001801272,0.0003958725,0.0001657107,0.0006690386,0.0006254382,0.000374166,0.0001169061,0.0004614374,0.002586208],"category_scores_gemma":[0.001024511,0.0001328158,0.0001555086,0.0003614086,0.0005203263,0.0002374095,0.0002798169,0.0002698797,0.0002277867],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002310178,"about_ca_system_score_gemma":0.0002068993,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004960559,"about_ca_topic_score_gemma":0.003724134,"domain_scores_codex":[0.9998592,0.00004017067,0.000009573766,0.00002022657,0.00002137261,0.00004950917],"domain_scores_gemma":[0.9997435,0.00007087105,0.00008369818,0.00001941411,0.00005584334,0.00002657948],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00047728,0.00005769453,0.9455333,0.0001408703,0.00005792675,0.003314994,0.002954798,0.0000410254,0.0388297,0.0001959022,0.0005496208,0.007846901],"study_design_scores_gemma":[0.00002319469,0.000379011,0.974122,0.00007615246,0.00006539183,0.00977694,0.004769243,0.00009402551,0.005058519,0.0002335877,0.005392076,0.000009837202],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959559,0.0006460647,0.0001856789,0.0001484784,0.00001455827,0.000014358,0.0002206743,0.00001345683,0.002800732],"genre_scores_gemma":[0.9990909,0.0001942967,0.0001242018,0.0000919344,0.00001959757,0.000005567662,0.0001557396,0.000002390009,0.0003153392],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004960559,"threshold_uncertainty_score":0.009863377,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W60985267","doi":"10.1023/a:1024443112717","title":"Cloning and Sequence Analysis of the Spike Gene of Porcine Epidemic Diarrhea Virus Chinju99","year":2003,"lang":"en","type":"article","venue":"Virus Genes","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":34,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph; Vancouver Island University","funders":"Korea Science and Engineering Foundation","keywords":"Biology; Porcine epidemic diarrhea virus; Open reading frame; Gene; Nucleic acid sequence; Cytosine; Virology; Peptide sequence; Amino acid; Asparagine; Genetics; Thymine; Guanine; Sequence analysis; Molecular biology; Nucleotide; DNA","authors":[{"name":"Sang‐Geon Yeo","is_ca":false},{"name":"Mercedes Escobar Hernández","is_ca":true},{"name":"Peter J. Krell","is_ca":true},{"name":"Éva É Nagy","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04095550706801433,"gpt":0.2602903063223275,"spread":0.2193347992543132,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001118016,0.0003542973,0.0002786328,0.0004824038,0.0004323831,0.0003975936,0.0002698988,0.0003713713,0.0008519479],"category_scores_gemma":[0.0002731982,0.0001721653,0.0007562631,0.0005656252,0.0003048076,0.0002068463,0.000251143,0.0006114245,0.0004956772],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000449306,"about_ca_system_score_gemma":0.0005812304,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003179243,"about_ca_topic_score_gemma":0.003506868,"domain_scores_codex":[0.9999239,0.000009360626,0.000006541629,0.0000172012,0.00002517746,0.0000178067],"domain_scores_gemma":[0.9997917,0.0000724772,0.0000245529,0.00002620163,0.00004009983,0.00004511659],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002256089,0.0000415358,0.0009288869,0.00003332034,0.000007277267,0.0002065807,0.00008683917,0.00007883665,0.9965233,0.0001700019,0.0000448243,0.001652992],"study_design_scores_gemma":[0.0001122462,0.000939532,0.1527823,0.0000398266,0.000177369,0.001920789,0.0005682291,0.003110141,0.8290879,0.001010439,0.01019356,0.00005762454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955662,0.0003148443,0.001953751,0.00008232135,0.000026396,0.00003709484,0.0008096137,0.00001904566,0.001190752],"genre_scores_gemma":[0.9815792,0.0005606815,0.004284822,0.0001798128,0.00003000321,0.00005062971,0.009876567,0.00003843163,0.003399883],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003179243,"threshold_uncertainty_score":0.00632149,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2144220908","doi":"10.1007/s11262-007-0139-3","title":"Complete nucleotide sequence of Nootka lupine vein-clearing virus","year":2007,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":32,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"","keywords":"Biology; RNA-dependent RNA polymerase; Movement protein; RNA polymerase; Genetics; Virology; Nucleic acid sequence; Gene; Plant virus; Virus; Polymerase; RNA; Coat protein","authors":[{"name":"N. L. Robertson","is_ca":false},{"name":"Fabien Côté","is_ca":true},{"name":"Christine Paré","is_ca":true},{"name":"Éric Leblanc","is_ca":true},{"name":"Michel G. Bergeron","is_ca":true},{"name":"Denis Leclerc","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09574921698586822,"gpt":0.2960812185077212,"spread":0.200332001521853,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001027981,0.0007963667,0.0006452042,0.0007020382,0.0007195463,0.0005013659,0.0004756412,0.0005680445,0.004568963],"category_scores_gemma":[0.0002404917,0.0002865141,0.0005312,0.0005353811,0.0003558072,0.0003336192,0.0001639189,0.0008469054,0.003144115],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005821654,"about_ca_system_score_gemma":0.000951155,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007034335,"about_ca_topic_score_gemma":0.006675246,"domain_scores_codex":[0.9999024,0.00001091403,0.000007602644,0.00002836159,0.0000213937,0.00002932961],"domain_scores_gemma":[0.9997029,0.00008544422,0.00003749235,0.0000339019,0.00004244051,0.00009782607],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00052843,0.00007620358,0.000573133,0.0001862682,0.00001211557,0.0003990681,0.000118139,0.0002041075,0.9914163,0.0004426326,0.0005994622,0.005444181],"study_design_scores_gemma":[0.0003427519,0.0015119,0.1315987,0.0002137521,0.0003352405,0.002601197,0.0006567147,0.002580526,0.6946985,0.001541765,0.1637502,0.000168853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8993266,0.006098445,0.0252129,0.0005077433,0.0006558266,0.0007166278,0.05030994,0.0007044264,0.01646761],"genre_scores_gemma":[0.7636525,0.003864011,0.0222711,0.0004063116,0.0001966654,0.0004006395,0.1876774,0.0002441409,0.02128719],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007034335,"threshold_uncertainty_score":0.01528472,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2527387780","doi":"10.1007/s11262-016-1393-z","title":"Molecular analysis of the hexon, penton base, and fiber-2 genes of Korean fowl adenovirus serotype 4 isolates from hydropericardium syndrome-affected chickens","year":2016,"lang":"en","type":"article","venue":"Virus Genes","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Capsid; Fowl; Serotype; Gene; Virulence; Phylogenetic tree; Virology; Genetics","authors":[{"name":"Hong-Su Park","is_ca":true},{"name":"I. K. oung Lim","is_ca":false},{"name":"Sangkyu Kim","is_ca":false},{"name":"Toh‐Kyung Kim","is_ca":false},{"name":"Choi‐Kyu Park","is_ca":false},{"name":"Sang‐Geon Yeo","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01055531844703656,"gpt":0.2493084811764086,"spread":0.238753162729372,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008516326,0.0004865575,0.0002162228,0.0006134579,0.0002131101,0.0002203045,0.000203093,0.0002360102,0.0008500698],"category_scores_gemma":[0.0002415907,0.0002328118,0.0004679055,0.000252625,0.0003358773,0.0001826753,0.0001597799,0.000460459,0.0003012573],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003097375,"about_ca_system_score_gemma":0.0002159389,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004048958,"about_ca_topic_score_gemma":0.002891185,"domain_scores_codex":[0.9999002,0.000009738145,0.00001459275,0.00003352588,0.00001644782,0.00002555984],"domain_scores_gemma":[0.9997029,0.00008716735,0.00006524923,0.00002787582,0.000052541,0.00006419439],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001288955,0.00001675166,0.001412842,0.00002186528,0.000009331943,0.0001738982,0.00006246083,0.00003162808,0.9977294,0.00003495852,0.00001178465,0.0003662613],"study_design_scores_gemma":[0.00004950439,0.0008678978,0.151771,0.00002292821,0.0002856236,0.002858013,0.0009537954,0.00126195,0.838193,0.0001331832,0.003573828,0.0000293393],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998255,0.0001516564,0.0006948853,0.00002376442,0.00001616064,0.00001490672,0.0004539686,0.000008061705,0.0003816919],"genre_scores_gemma":[0.9929984,0.0002943565,0.001723842,0.00004770313,0.00001051696,0.00002688683,0.002762808,0.00001792645,0.002117638],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004048958,"threshold_uncertainty_score":0.00805074,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1981044814","doi":"10.1007/s11262-011-0601-0","title":"Molecular characterization of Indian rabies virus isolates by partial sequencing of nucleoprotein (N) and phosphoprotein (P) genes","year":2011,"lang":"en","type":"article","venue":"Virus Genes","topic":"Rabies epidemiology and control","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Guru Angad Dev Veterinary and Animal Sciences University; Canadian Food Inspection Agency","keywords":"Rabies virus; Rabies; Biology; Nucleoprotein; Virology; Virus; Molecular epidemiology; Phylogenetic tree; Gene; Zoonosis; Phylogenetics; Neurotropic virus; Genotype; Genetics","authors":[{"name":"G.B. Manjunatha Reddy","is_ca":false},{"name":"Rajendra Singh","is_ca":false},{"name":"Karam Pal Singh","is_ca":false},{"name":"Praveen K. Gupta","is_ca":false},{"name":"Anita Desai","is_ca":false},{"name":"S.K. Shankar","is_ca":false},{"name":"Muthannan Andavar Ramakrishnan","is_ca":false},{"name":"Rishendra Verma","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01417953063692581,"gpt":0.2072332499461072,"spread":0.1930537193091814,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001072904,0.000403084,0.00025653,0.0007746599,0.0004788732,0.0005318588,0.0002780925,0.0002450338,0.0008959809],"category_scores_gemma":[0.0005575444,0.0001721833,0.0005559747,0.000801186,0.0004150912,0.0002907837,0.0002569469,0.0007101961,0.0005072979],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003694538,"about_ca_system_score_gemma":0.0004689114,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008324651,"about_ca_topic_score_gemma":0.004952972,"domain_scores_codex":[0.9998523,0.00001505458,0.0000138295,0.00003435812,0.00003536718,0.00004903265],"domain_scores_gemma":[0.9995435,0.0001126057,0.00007864225,0.00004599001,0.0001327627,0.00008647935],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002211056,0.00004589818,0.006122905,0.00006644661,0.00001884416,0.0002320046,0.0002824809,0.0001344276,0.9896647,0.0001294769,0.00009464451,0.00298695],"study_design_scores_gemma":[0.0000320736,0.001015558,0.4542184,0.00002759083,0.0003089537,0.005068297,0.001994766,0.001441894,0.5247477,0.0005575893,0.01053039,0.0000567336],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931557,0.0002737294,0.001734387,0.00008367667,0.00002521171,0.00004628456,0.001746736,0.00003252674,0.00290179],"genre_scores_gemma":[0.9878141,0.0005044622,0.003275614,0.0001255041,0.00003252932,0.00005479053,0.006070471,0.00003592898,0.002086638],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008324651,"threshold_uncertainty_score":0.01655239,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1548856560","doi":"10.1023/a:1020178326531","title":"Molecular Characterization of Three New Avian Infectious Bronchitis Virus (IBV) Strains Isolated in Quebec","year":2002,"lang":"en","type":"article","venue":"Virus Genes","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Université de Montréal; Institut National de la Recherche Scientifique","funders":"","keywords":"Biology; Virology; Infectious bronchitis virus; Hypervariable region; Avian infectious bronchitis; HaeIII; Restriction enzyme; Serotype; Avian infectious bronchitis virus; Gene; Restriction fragment length polymorphism; Virus; Molecular biology; Genotype; Genetics","authors":[{"name":"Ridha Smati","is_ca":true},{"name":"A. Silim","is_ca":true},{"name":"Claude Guertin","is_ca":true},{"name":"Marc Henrichon","is_ca":true},{"name":"Mehdi Vasfi Marandi","is_ca":true},{"name":"Max Arella","is_ca":true},{"name":"Abderrazzak Merzouki","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02420315548185415,"gpt":0.210863179041138,"spread":0.1866600235592839,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002978062,0.0006948831,0.0004389384,0.001107136,0.001698528,0.0009696669,0.0006221858,0.0007926308,0.001454499],"category_scores_gemma":[0.0009037361,0.0002604863,0.0003713304,0.0008145777,0.0006865459,0.0003822799,0.0003299079,0.001089042,0.0003384091],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.006753256,"about_ca_system_score_gemma":0.002169419,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.6245929,"about_ca_topic_score_gemma":0.6733245,"domain_scores_codex":[0.9995918,0.0000271296,0.00002679599,0.00009431578,0.00009000456,0.0001700792],"domain_scores_gemma":[0.9990122,0.0001696365,0.0001004432,0.00004954409,0.0004444379,0.0002237767],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007360918,0.0002645746,0.09209286,0.0001201036,0.00008229804,0.001008165,0.001992445,0.0004791065,0.893855,0.000446524,0.0006637028,0.008259072],"study_design_scores_gemma":[0.00009082793,0.0009697446,0.9034969,0.00006635513,0.0001160868,0.001675024,0.003149552,0.001476531,0.07748014,0.0001159338,0.01130617,0.00005688292],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954609,0.0003007875,0.0005533748,0.00008892339,0.00003248976,0.00007394624,0.001142792,0.0000115147,0.002335259],"genre_scores_gemma":[0.989251,0.0003014411,0.001510101,0.0002949645,0.00001396778,0.00007136773,0.004458831,0.00002003797,0.004078446],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6245929,"threshold_uncertainty_score":0.7552359,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2049029335","doi":"10.1007/s11262-005-0035-7","title":"Optimization of Codon Usage of Poxvirus Genes allows for Improved Transient Expression in Mammalian Cells","year":2006,"lang":"en","type":"article","venue":"Virus Genes","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University; Robarts Clinical Trials; Trent University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Biology; Codon usage bias; Gene; Poxviridae; Genetics; Gene expression; Transfection; Messenger RNA; Virology; Vaccinia; Molecular biology; Genome; Recombinant DNA","authors":[{"name":"John W. Barrett","is_ca":true},{"name":"Yunming Sun","is_ca":true},{"name":"Steven H. Nazarian","is_ca":true},{"name":"Tara A. Belsito","is_ca":true},{"name":"Craig R. Brunetti","is_ca":true},{"name":"Grant McFadden","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01461215213771349,"gpt":0.2508718271685118,"spread":0.2362596750307983,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006219394,0.0008026892,0.0008797324,0.000395189,0.0003304588,0.0008694142,0.0004654752,0.0005076617,0.001027577],"category_scores_gemma":[0.0007328556,0.0003418641,0.0006229283,0.0006788597,0.000466859,0.0004986088,0.0004217307,0.001729167,0.0007689412],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004924029,"about_ca_system_score_gemma":0.0004050823,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005348697,"about_ca_topic_score_gemma":0.0007721882,"domain_scores_codex":[0.9994343,0.000140104,0.0001103219,0.00009543999,0.00013674,0.00008303801],"domain_scores_gemma":[0.9993588,0.0002176827,0.0001523392,0.000135469,0.00007326918,0.00006233379],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009504815,0.00002791406,0.00007453303,0.0000317148,0.000004905426,0.00002953192,0.00002050593,0.00009748159,0.998254,0.0001388507,0.00003251772,0.001192941],"study_design_scores_gemma":[0.000008211562,0.00006191456,0.000438236,0.000004787528,0.00001675422,0.00007140928,0.000009784289,0.0003850466,0.9972327,0.00004071363,0.001725397,0.000004972036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9356297,0.001460056,0.05877494,0.0002927532,0.0001990222,0.0002245679,0.001066324,0.0006420019,0.001710645],"genre_scores_gemma":[0.9160419,0.001681855,0.07308707,0.0002103067,0.00006852237,0.0002636982,0.003604587,0.001128177,0.003913948],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001027577,"threshold_uncertainty_score":0.003572702,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2060513460","doi":"10.1007/s11262-014-1085-5","title":"Detection, distribution, and genetic diversity of Australian grapevine viroid in grapevines in India","year":2014,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Sherbrooke","funders":"Japan Society for the Promotion of Science","keywords":"Biology; Genetic diversity; Phylogenetic tree; Viroid; Cultivar; Genetic variation; Nucleotide diversity; Genetics; Botany; Haplotype; Genotype; Gene; RNA; Demography; Population","authors":[{"name":"Charith Raj Adkar‐Purushothama","is_ca":true},{"name":"Poornachandra Rao Kanchepalli","is_ca":false},{"name":"Sreenivasa Marikunte Yanjarappa","is_ca":false},{"name":"Zhixiang Zhang","is_ca":false},{"name":"Teruo Sano","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02487222530179956,"gpt":0.2342277807511282,"spread":0.2093555554493286,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001792136,0.0001292878,0.0001947758,0.001252694,0.0007159355,0.0006326061,0.0003064435,0.0003612967,0.0004467868],"category_scores_gemma":[0.0003328495,0.0002291721,0.000201441,0.0007170003,0.0005177231,0.0001949934,0.0002970675,0.0003288707,0.0001606345],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006165195,"about_ca_system_score_gemma":0.0002869985,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02130932,"about_ca_topic_score_gemma":0.03070168,"domain_scores_codex":[0.9997514,0.00002957272,0.00001380086,0.0001032097,0.00004554895,0.00005650895],"domain_scores_gemma":[0.9996395,0.00009948877,0.00005387632,0.00002951509,0.00009296999,0.00008471854],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003735541,0.000124002,0.6406618,0.00008563603,0.00006365011,0.0006095199,0.0112239,0.0002052962,0.3372963,0.0002341495,0.0001262419,0.008995947],"study_design_scores_gemma":[0.000001511635,0.00007348161,0.9968408,0.000003168735,0.000009443447,0.0002440359,0.001191208,0.00006118967,0.001303844,0.00001233921,0.0002555641,0.000003452414],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999496,0.00003021492,0.00004693114,0.000004818139,6.140643e-7,0.000002940975,0.00004046663,0.000002023922,0.000375872],"genre_scores_gemma":[0.999373,0.00002431679,0.00007204524,0.000007497598,6.648927e-7,0.000002427842,0.0001264448,0.000001072219,0.0003924892],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02130932,"threshold_uncertainty_score":0.04237056,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3110240570","doi":"10.1007/s11262-020-01806-9","title":"Molecular interactions of plant viral satellites","year":2020,"lang":"en","type":"review","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Helper virus; Genome; Computational biology; RNA; Virus; Satellite; Viral replication; DNA; Plant virus; Genetics; Virology; Gene; Evolutionary biology","authors":[{"name":"Uzma Badar","is_ca":true},{"name":"Srividhya Venkataraman","is_ca":true},{"name":"Mounir G. AbouHaidar","is_ca":true},{"name":"Kathleen Hefferon","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.09744248434706992,"gpt":0.3316357268718768,"spread":0.2341932425248068,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000623271,0.001085699,0.001596584,0.002135851,0.0002230107,0.001175983,0.0008343915,0.001088414,0.001941746],"category_scores_gemma":[0.000760105,0.0003251412,0.0003697535,0.001939638,0.0005981489,0.001201003,0.0008325637,0.001300666,0.001087842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007529111,"about_ca_system_score_gemma":0.000893664,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001190281,"about_ca_topic_score_gemma":0.001946292,"domain_scores_codex":[0.999835,0.00003168153,0.00002062103,0.00003677478,0.00005632707,0.00001946452],"domain_scores_gemma":[0.9996729,0.0002007918,0.00004619661,0.000008923701,0.00004913066,0.00002201756],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001168007,0.00004095822,0.000216994,0.01907927,0.00009161585,0.0002087211,0.00006082409,0.0005833099,0.00490549,0.004340763,0.01986437,0.9504909],"study_design_scores_gemma":[0.00002095611,0.00008782515,0.0008250427,0.003368998,0.0001686274,0.0008714216,0.00007036755,0.0001203295,0.001240012,0.002372864,0.9908277,0.00002581043],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00006174963,0.9993978,0.0000603931,0.00006492496,0.00008572743,0.000001608207,0.000007939912,0.000002298324,0.0003177269],"genre_scores_gemma":[0.0003912215,0.9989911,0.0001015089,0.00008492843,0.0001248096,0.000003211426,0.00002283092,6.631988e-7,0.000279692],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002135851,"threshold_uncertainty_score":0.006495774,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1989014716","doi":"10.1007/s11262-008-0300-7","title":"Genetic analysis of H3 subtype influenza viruses isolated from domestic ducks in northern China during 2004–2005","year":2008,"lang":"en","type":"article","venue":"Virus Genes","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Ottawa","funders":"","keywords":"Influenza A virus subtype H5N1; Biology; Virology; Outbreak; Medical microbiology; Pandemic; Virus; H5N1 genetic structure; Equine influenza; Influenza A virus; Highly pathogenic; Phylogenetic tree; Avian influenza virus; Phylogenetics; Gene; Coronavirus disease 2019 (COVID-19); Genetics; Infectious disease (medical specialty); Medicine","authors":[{"name":"Juan Pu","is_ca":false},{"name":"Qinfang Liu","is_ca":false},{"name":"Yulei Fan","is_ca":false},{"name":"Earl G. Brown","is_ca":true},{"name":"Fulin Tian","is_ca":false},{"name":"Jinhua Liu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.05082630887367117,"gpt":0.3405401545099536,"spread":0.2897138456362824,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000268079,0.0003886216,0.0003846379,0.000997953,0.0008825727,0.0003717685,0.0002704673,0.0003044905,0.0003193853],"category_scores_gemma":[0.0002679634,0.0002034673,0.0003498936,0.0008526829,0.0004548389,0.0002204014,0.0002249067,0.0002853242,0.00008308057],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002021627,"about_ca_system_score_gemma":0.0008780048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.06556803,"about_ca_topic_score_gemma":0.12238,"domain_scores_codex":[0.9998006,0.00001517688,0.00001685722,0.0000708497,0.00004403468,0.0000525543],"domain_scores_gemma":[0.9995351,0.00004448821,0.0001201986,0.00001743387,0.0001669049,0.0001158247],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006491442,0.0001066974,0.7475889,0.00009478397,0.0001082289,0.0009178095,0.002868069,0.0002559795,0.2415407,0.00006210746,0.0001575501,0.005649951],"study_design_scores_gemma":[0.000002868088,0.0001391801,0.995277,0.000003288797,0.00002115912,0.0002339652,0.0008187459,0.0001160634,0.003090492,0.000006199267,0.0002870305,0.000004019462],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995723,0.00004794385,0.00004467044,0.00000511846,0.000001961733,0.000005405465,0.0001220076,9.033603e-7,0.0001997525],"genre_scores_gemma":[0.9982497,0.00007610965,0.0002026755,0.0000352382,0.000003189172,0.000009641005,0.0005708616,0.000001724569,0.0008508181],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06556803,"threshold_uncertainty_score":0.1303728,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W162647077","doi":"10.1023/a:1008121228637","title":"The Product of ORF III in Cauliflower Mosaic Virus Interacts with the Viral Coat Protein through its C-terminal Proline Rich Domain","year":2001,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"","keywords":"Biology; Coat protein; Virus; Amino acid; Virology; Cauliflower mosaic virus; Infectivity; Cowpea mosaic virus; Two-hybrid screening; Cucumber mosaic virus; Plant virus; Yeast; Biochemistry; RNA; Gene; Transgene","authors":[{"name":"Denis Leclerc","is_ca":true},{"name":"Livia Stavolone","is_ca":true},{"name":"E Meier","is_ca":false},{"name":"Orlene Guerra‐Peraza","is_ca":true},{"name":"Étienne Herzog","is_ca":true},{"name":"Thomas Höhn","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02914641142229061,"gpt":0.2673060940529455,"spread":0.2381596826306549,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001191887,0.0005448792,0.0002925656,0.0001935281,0.000389769,0.0005664898,0.000179445,0.0003901567,0.0009392501],"category_scores_gemma":[0.0002596388,0.0001513427,0.000734119,0.0001460464,0.0003484074,0.0002539018,0.0002142466,0.0006081947,0.001286702],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005384733,"about_ca_system_score_gemma":0.0003365337,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001843114,"about_ca_topic_score_gemma":0.001064293,"domain_scores_codex":[0.9999241,0.000007640767,0.000003613692,0.00002121259,0.00001454977,0.00002893189],"domain_scores_gemma":[0.9996619,0.00007123809,0.00008756261,0.00002788702,0.00004409661,0.0001072816],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006724372,0.000009468466,0.0004309368,0.00001835493,0.000003059396,0.0002047676,0.00002569869,0.0000229348,0.998451,0.0001216792,0.00006136991,0.0005834349],"study_design_scores_gemma":[0.00001677204,0.0001943235,0.02669921,0.0000178286,0.00003452642,0.002575924,0.0001921196,0.0008313166,0.9636552,0.0003102678,0.005457968,0.00001449603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913769,0.0006761198,0.005565467,0.0001051546,0.00008185361,0.00001950718,0.0003897844,0.00009166182,0.001693538],"genre_scores_gemma":[0.9863609,0.0004089786,0.005616468,0.0001231159,0.00005218607,0.00002249966,0.002526551,0.00008890103,0.004800285],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001843114,"threshold_uncertainty_score":0.003906906,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2037128653","doi":"10.1007/s11262-005-0031-y","title":"Sequence Analysis of the Left End of Fowl Adenovirus Genomes","year":2006,"lang":"en","type":"article","venue":"Virus Genes","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"ORFS; Biology; GenBank; Genetics; Genome; Nucleic acid sequence; Homology (biology); Sequence analysis; Restriction enzyme; Gene; Peptide sequence; Virology; Open reading frame","authors":[{"name":"Juan Carlos Corredor","is_ca":true},{"name":"Peter J. Krell","is_ca":true},{"name":"Éva Nagy","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02110173518328034,"gpt":0.2952151627447291,"spread":0.2741134275614487,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001849629,0.0004654803,0.0005088909,0.0007425677,0.0005447151,0.0005816033,0.0003333331,0.0004314667,0.002284141],"category_scores_gemma":[0.0005171206,0.000299211,0.0008311349,0.0003135677,0.0003345544,0.000236633,0.0001822939,0.001178216,0.001743535],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008017985,"about_ca_system_score_gemma":0.0007653984,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004266788,"about_ca_topic_score_gemma":0.004951835,"domain_scores_codex":[0.9998191,0.00002511928,0.0000146731,0.00005276741,0.00003913108,0.00004934362],"domain_scores_gemma":[0.9992865,0.0002515348,0.00008363176,0.00008049126,0.0001640301,0.0001338213],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003567367,0.00003871628,0.0003943006,0.00008738729,0.000009357213,0.0001392997,0.00006909792,0.0000837694,0.995914,0.0003360629,0.00009655444,0.002474656],"study_design_scores_gemma":[0.00003523334,0.0004329856,0.01714359,0.00003885667,0.00007677664,0.0007578493,0.0001385552,0.0008530925,0.9675518,0.0002183366,0.0127287,0.00002424209],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9499727,0.002648478,0.03414775,0.0003773783,0.0002300461,0.0002017978,0.006361589,0.0002435485,0.005816766],"genre_scores_gemma":[0.9029545,0.001748929,0.04819246,0.0005273126,0.00009260994,0.0001761336,0.03243969,0.0002809278,0.01358749],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004266788,"threshold_uncertainty_score":0.008483946,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2726551565","doi":"10.1007/s11262-017-1485-4","title":"Characterization of Eptesipoxvirus, a novel poxvirus from a microchiropteran bat","year":2017,"lang":"en","type":"article","venue":"Virus Genes","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Biology; Genome; Gene; Poxviridae; Genetics; GenBank; Orthopoxvirus; Virology; Cowpox virus; Clade; Virus; Vaccinia; Phylogenetics","authors":[{"name":"Shin-Lin Tu","is_ca":true},{"name":"Yoshinori Nakazawa","is_ca":false},{"name":"Jinxin Gao","is_ca":false},{"name":"Kimberly Wilkins","is_ca":false},{"name":"Nadia Gallardo‐Romero","is_ca":false},{"name":"Li Yu","is_ca":false},{"name":"Ginny L. Emerson","is_ca":false},{"name":"Darin S. Carroll","is_ca":false},{"name":"Chris Upton","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02780611748278124,"gpt":0.2703860902592883,"spread":0.2425799727765071,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001263736,0.0002538237,0.0001724663,0.0002744513,0.0002944758,0.0004069229,0.0001197534,0.0003684459,0.0006197565],"category_scores_gemma":[0.0002537796,0.000119628,0.0002288695,0.000190932,0.0002718276,0.0004883299,0.0001349723,0.0005897195,0.0002848619],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002355219,"about_ca_system_score_gemma":0.0002079049,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009366338,"about_ca_topic_score_gemma":0.0008571008,"domain_scores_codex":[0.9999164,0.000009933234,0.000008761552,0.00002646085,0.00002030487,0.00001812918],"domain_scores_gemma":[0.9997721,0.00007435714,0.00003897984,0.00002849241,0.00003781138,0.00004831262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006259285,0.00003497669,0.004179321,0.00002584493,0.000004734786,0.000262979,0.000118584,0.00004713321,0.9937268,0.00009365534,0.00003009592,0.001413296],"study_design_scores_gemma":[0.00005131971,0.001821906,0.4110131,0.00004984201,0.0001158046,0.006751654,0.001663408,0.003041065,0.5634719,0.0004752638,0.01152297,0.00002180551],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980931,0.000279293,0.0006316671,0.00004009945,0.00001108494,0.00001897422,0.0002215337,0.000005607688,0.0006986032],"genre_scores_gemma":[0.9920796,0.0005351834,0.002419272,0.00008761033,0.00002072617,0.00003394785,0.00251071,0.00001140987,0.002301553],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009366338,"threshold_uncertainty_score":0.002073348,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2067087372","doi":"10.1007/s11262-007-0181-1","title":"Complete nucleotide sequence and experimental host range of Okra mosaic virus","year":2007,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Turnip yellow mosaic virus; Genetics; Movement protein; Plant virus; Nucleic acid sequence; Virus; Virology; ORFS; RNA; Peptide sequence; Gene; Open reading frame; Coat protein","authors":[{"name":"D. Stephan","is_ca":false},{"name":"Mahbuba Siddiqua","is_ca":true},{"name":"Anh Ta Hoang","is_ca":false},{"name":"J. Engelmann","is_ca":false},{"name":"Stephan Winter","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07641364375533077,"gpt":0.2989546598041132,"spread":0.2225410160487825,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002100082,0.0006923085,0.0005123556,0.0007604977,0.0009780467,0.0003929145,0.0005876765,0.0004365518,0.004319046],"category_scores_gemma":[0.0003590192,0.0004221178,0.0005398549,0.0006809352,0.0004639773,0.0003233585,0.0002317304,0.0009271809,0.001479851],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005805084,"about_ca_system_score_gemma":0.0006368673,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004163398,"about_ca_topic_score_gemma":0.005224215,"domain_scores_codex":[0.9997278,0.0000480782,0.00003765888,0.0000792906,0.00003784707,0.00006926628],"domain_scores_gemma":[0.9995385,0.0001881032,0.00004270659,0.00009676094,0.00004465644,0.00008931284],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007935566,0.0001377641,0.0007980712,0.0001187691,0.00001231906,0.0001192662,0.00009485363,0.0002192892,0.9931026,0.0006087459,0.0002156222,0.003779178],"study_design_scores_gemma":[0.0002643497,0.001212292,0.0689396,0.00008247012,0.0002354007,0.0009437053,0.0003350752,0.0009989088,0.8801501,0.0006573449,0.04609879,0.0000819075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9387777,0.001863847,0.01337873,0.0001456848,0.0001199423,0.0007279954,0.03558437,0.0002566501,0.009145012],"genre_scores_gemma":[0.8071318,0.002430228,0.02405243,0.0002138183,0.00006547001,0.0008519837,0.1564835,0.0002201964,0.008550642],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004319046,"threshold_uncertainty_score":0.01444864,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2740954104","doi":"10.1007/s11262-017-1501-8","title":"Two novel poxviruses with unusual genome rearrangements: NY_014 and Murmansk","year":2017,"lang":"en","type":"article","venue":"Virus Genes","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Centers for Disease Control and Prevention; University of Victoria","keywords":"Biology; Genome; Genetics; Gene; Genome evolution; Virology; Evolutionary biology","authors":[{"name":"Chad Smithson","is_ca":true},{"name":"Helmut E. Meyer","is_ca":false},{"name":"Crystal M. Gigante","is_ca":false},{"name":"Jinxin Gao","is_ca":false},{"name":"Hui Zhao","is_ca":false},{"name":"Dhwani Batra","is_ca":false},{"name":"Inger K. Damon","is_ca":false},{"name":"Chris Upton","is_ca":true},{"name":"Li Yu","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03501310556429588,"gpt":0.3001264165054341,"spread":0.2651133109411383,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001720913,0.0004544281,0.0002635294,0.000581408,0.0004590764,0.0005362293,0.0004772534,0.0008525865,0.002094223],"category_scores_gemma":[0.0006055295,0.000182795,0.0004301856,0.0004735633,0.0007195316,0.0006719839,0.0004677378,0.001200461,0.0003433077],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006030506,"about_ca_system_score_gemma":0.0003713626,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006499475,"about_ca_topic_score_gemma":0.0004974325,"domain_scores_codex":[0.9998251,0.00002909717,0.00002123413,0.00004680636,0.0000327585,0.00004503436],"domain_scores_gemma":[0.9997037,0.00009799113,0.00009475416,0.00003136657,0.00001604756,0.00005609518],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001898687,0.0003589696,0.04153243,0.0001504228,0.00006782299,0.01834118,0.0007758525,0.0004148125,0.917129,0.002160612,0.0005867078,0.01658359],"study_design_scores_gemma":[0.0003327825,0.001664219,0.4052286,0.00007281623,0.0002989366,0.07619561,0.002631042,0.003429484,0.473677,0.002595971,0.03372403,0.0001494788],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977432,0.0001702688,0.0007517794,0.000116584,0.00004910171,0.00002887047,0.0002576367,0.00001945056,0.0008630239],"genre_scores_gemma":[0.995353,0.0001932471,0.001898043,0.0000955927,0.00005327709,0.0000526588,0.001013047,0.00001773238,0.001323354],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002094223,"threshold_uncertainty_score":0.007005811,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2518096075","doi":"10.1007/s11262-016-1388-9","title":"The genomes of three North American orthopoxviruses","year":2016,"lang":"en","type":"article","venue":"Virus Genes","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"Centers for Disease Control and Prevention; University of Victoria","keywords":"Biology; Clade; Genome; Phylogenetic tree; Phylogenetics; Virology; Gene; Genetics; Evolutionary biology","authors":[{"name":"Chad Smithson","is_ca":true},{"name":"Nick C. Tang","is_ca":true},{"name":"Scott Sammons","is_ca":false},{"name":"Mike Frace","is_ca":false},{"name":"Dhwani Batra","is_ca":false},{"name":"Yu Li","is_ca":false},{"name":"Ginny L. Emerson","is_ca":false},{"name":"Darin S. Carroll","is_ca":false},{"name":"Chris Upton","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02324087612309281,"gpt":0.2636670224915468,"spread":0.240426146368454,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002228243,0.0002589858,0.0001479771,0.0004901626,0.0008011246,0.0007070074,0.0001882431,0.0004595062,0.0009258787],"category_scores_gemma":[0.0005983539,0.00008165096,0.0001664633,0.0006314932,0.000626438,0.000448787,0.000420943,0.0006849771,0.0001288663],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008035551,"about_ca_system_score_gemma":0.0006094322,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005801498,"about_ca_topic_score_gemma":0.005538113,"domain_scores_codex":[0.9998084,0.00002947299,0.00001059092,0.00004791919,0.00004829024,0.00005542663],"domain_scores_gemma":[0.9995458,0.0001233984,0.0001117505,0.00004061797,0.00009430191,0.00008417082],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002079237,0.0002726229,0.2076461,0.0002069296,0.00005821724,0.0009535496,0.005697572,0.0004197568,0.731676,0.004180762,0.0007466745,0.0460627],"study_design_scores_gemma":[0.00005534174,0.0006780031,0.9199876,0.00005631498,0.00008830894,0.002302098,0.007897967,0.0006376065,0.05125803,0.001572767,0.01543874,0.0000272625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997003,0.0002140747,0.0002171236,0.00007365213,0.000008893505,0.00001840724,0.0001719876,0.000002841928,0.00228994],"genre_scores_gemma":[0.9965425,0.0003458062,0.0007546766,0.0001225927,0.000008118456,0.00002975612,0.0006625718,0.000003101851,0.001530949],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9941985,"threshold_uncertainty_score":0.01153547,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2774267900","doi":"10.1007/s11262-017-1525-0","title":"The complete genome sequence of a third distinct baculovirus isolated from the true armyworm, Mythimna unipuncta, contains two copies of the lef-7 gene","year":2017,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"U.S. Department of Agriculture","keywords":"Biology; Mythimna separata; Genome; Genetics; Gene; Nuclear gene; Sequence (biology); Entomology; Evolutionary biology; Computational biology; Zoology; Botany; Lepidoptera genitalia","authors":[{"name":"Robert L. Harrison","is_ca":false},{"name":"Joseph Mowery","is_ca":false},{"name":"Daniel L. Rowley","is_ca":false},{"name":"Gary R. Bauchan","is_ca":false},{"name":"David A. Theilmann","is_ca":true},{"name":"George F Rohrmann","is_ca":false},{"name":"Martin A. Erlandson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02772090881119674,"gpt":0.2833338774926044,"spread":0.2556129686814076,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001141068,0.0006360181,0.0006313978,0.0007362373,0.0004989314,0.0006843588,0.0004009534,0.0004843382,0.001971753],"category_scores_gemma":[0.0002093157,0.000268719,0.0007190176,0.0006799541,0.0003492398,0.0003705777,0.000291725,0.001111017,0.001241048],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007052856,"about_ca_system_score_gemma":0.0008582383,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002954792,"about_ca_topic_score_gemma":0.002696769,"domain_scores_codex":[0.9999244,0.000005084552,0.000005926398,0.00002504999,0.00002397206,0.00001555855],"domain_scores_gemma":[0.9997444,0.00005904721,0.00005335265,0.00002758212,0.00003919459,0.00007644032],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001879,0.00002211938,0.0002802884,0.0001538349,0.000012375,0.0001631094,0.00006429453,0.00006127462,0.9945285,0.0003784527,0.0001740473,0.00397381],"study_design_scores_gemma":[0.0002876342,0.0008359268,0.1036943,0.0002244886,0.0004554203,0.002834549,0.0003908609,0.001986399,0.79805,0.001316294,0.08979899,0.0001251752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9129215,0.007772656,0.03749726,0.0005710566,0.0003503053,0.0003299769,0.03390825,0.0005496513,0.006099283],"genre_scores_gemma":[0.6788948,0.006621438,0.0494235,0.000598183,0.0001590371,0.0005087847,0.24741,0.0004300923,0.01595407],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002954792,"threshold_uncertainty_score":0.006596148,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2026553303","doi":"10.1007/s11262-005-0046-4","title":"Genetic characterization of a new mammalian reovirus, type 2 Winnipeg (T2W)","year":2006,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Serotype; Gene; Virology; Genetics; Reoviridae; Virus; Rotavirus","authors":[{"name":"Jieyuan Jiang","is_ca":true},{"name":"Laura Hermann","is_ca":true},{"name":"Kevin M. Coombs","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02781564517479759,"gpt":0.2939688156377235,"spread":0.266153170462926,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001319105,0.0005573457,0.0002162333,0.0005518579,0.0003948989,0.0004713909,0.0004434851,0.0004311011,0.001364207],"category_scores_gemma":[0.0002790978,0.0002416727,0.0004396648,0.0002540447,0.0003461506,0.0002471985,0.0003579707,0.0007655184,0.0004579908],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001013319,"about_ca_system_score_gemma":0.001154118,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02867529,"about_ca_topic_score_gemma":0.03655709,"domain_scores_codex":[0.9998809,0.000009239658,0.000008877357,0.00003421823,0.00003053182,0.00003625972],"domain_scores_gemma":[0.9998271,0.00002567547,0.00005324122,0.00001904923,0.00003461058,0.0000404049],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005312077,0.00001606839,0.0005272795,0.00001406447,0.000005583813,0.0001272972,0.00003970102,0.0000671005,0.9978772,0.0002838426,0.00004583906,0.0009427464],"study_design_scores_gemma":[0.00007560741,0.0008108563,0.04222948,0.00003785798,0.0001064449,0.003547837,0.0005097483,0.002732577,0.9110451,0.0004582234,0.03838609,0.0000601781],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9885004,0.0003686463,0.006516164,0.0001401081,0.00007606864,0.0001631956,0.00110734,0.00007143227,0.003056657],"genre_scores_gemma":[0.957175,0.0006674728,0.02252135,0.0002487828,0.00001962687,0.0001319638,0.006069867,0.0002195911,0.01294632],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02867529,"threshold_uncertainty_score":0.05701673,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2018211094","doi":"10.1007/s11262-008-0220-6","title":"Glycoprotein gene truncation in avian metapneumovirus subtype C isolates from the United States","year":2008,"lang":"en","type":"article","venue":"Virus Genes","topic":"Respiratory viral infections research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"U.S. Department of Agriculture","keywords":"Biology; Metapneumovirus; Virology; Medical microbiology; Glycoprotein; Gene; Human metapneumovirus; Microbiology; Genetics; Respiratory system; Respiratory tract infections","authors":[{"name":"Binu T. Velayudhan","is_ca":false},{"name":"Qingzhong Yu","is_ca":false},{"name":"Carlos Estévez","is_ca":false},{"name":"Κ. V. Nagaraja","is_ca":false},{"name":"David A. Halvorson","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06874532199436052,"gpt":0.3270508657987466,"spread":0.2583055438043861,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001979257,0.0001467371,0.000157706,0.0004595225,0.0004061782,0.0002185584,0.00009742679,0.000257779,0.0004351214],"category_scores_gemma":[0.0004961239,0.00009198828,0.0001293631,0.0004972528,0.0001239531,0.00009521259,0.0001430947,0.0002252711,0.00008878293],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004970382,"about_ca_system_score_gemma":0.0003165265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02395539,"about_ca_topic_score_gemma":0.04144699,"domain_scores_codex":[0.9998976,0.00001525216,0.00001267724,0.0000275167,0.00002792697,0.00001906195],"domain_scores_gemma":[0.9997326,0.00005107029,0.00008403182,0.00001836384,0.00007700522,0.00003699592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006131969,0.0001003613,0.7610425,0.00006072167,0.00007894744,0.001021475,0.0009973041,0.0004628055,0.223483,0.0001318108,0.0004880447,0.01151987],"study_design_scores_gemma":[0.000007981867,0.0001485111,0.987551,0.00001530347,0.00002157918,0.001047442,0.0004519197,0.0004704972,0.009300426,0.00002446197,0.0009549975,0.000005805276],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99957,0.0000772432,0.00003046673,0.000007612085,0.000001617668,0.000002081465,0.0001177319,0.000001008618,0.0001922289],"genre_scores_gemma":[0.9987106,0.0001159514,0.0001722591,0.00004520922,0.000001346712,0.000004031422,0.0008275799,0.000001617066,0.0001213801],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02395539,"threshold_uncertainty_score":0.04763186,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2059174415","doi":"10.1007/s11262-007-0113-0","title":"Characterisation and partial sequence analysis of two novel cypoviruses isolated from the winter moth Operophtera brumata (Lepidoptera: Geometridae)","year":2007,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of New Brunswick","funders":"Natural Environment Research Council","keywords":"Biology; Lepidoptera genitalia; Botany; Zoology; Ecology","authors":[{"name":"Robert I. Graham","is_ca":true},{"name":"Shujing Rao","is_ca":false},{"name":"Steven M. Sait","is_ca":false},{"name":"Peter Mertens","is_ca":false},{"name":"Rosemary S. Hails","is_ca":false},{"name":"Robert D. Possee","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.07637829280117393,"gpt":0.3033470319380077,"spread":0.2269687391368337,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001000278,0.0004853966,0.0003439516,0.0004958294,0.0003071308,0.0005723703,0.0002125495,0.0004034766,0.0007239187],"category_scores_gemma":[0.0004746866,0.0002145896,0.0005260818,0.0004172488,0.0004118118,0.0002682641,0.0002599992,0.0007593188,0.000342795],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003749724,"about_ca_system_score_gemma":0.0003377548,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001928419,"about_ca_topic_score_gemma":0.002442014,"domain_scores_codex":[0.9998831,0.0000123392,0.00001110821,0.00003212048,0.00002649924,0.0000349185],"domain_scores_gemma":[0.999294,0.0001918958,0.0001739867,0.0000623872,0.0001092414,0.0001684324],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001525757,0.0000318588,0.003280894,0.00005663305,0.00001189976,0.0001539151,0.0001506871,0.00003681157,0.994844,0.00004906841,0.00002991065,0.001201738],"study_design_scores_gemma":[0.0001219523,0.002204033,0.5006215,0.00008804733,0.0003264412,0.006117703,0.001533147,0.001020545,0.4774886,0.0003151987,0.01010855,0.0000542462],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978024,0.0004657711,0.0006204562,0.00003474927,0.00002420219,0.00002270227,0.0006185105,0.00000670171,0.0004045742],"genre_scores_gemma":[0.9897955,0.0005566434,0.002369106,0.0001151594,0.0000309574,0.0000389943,0.005740402,0.00001958686,0.001333665],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001928419,"threshold_uncertainty_score":0.003834426,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2051466488","doi":"10.1007/s11262-010-0504-5","title":"The genome sequence of an H11N2 avian influenza virus from a Thick-billed Murre (Uria lomvia) shows marine-specific and regional patterns of relationships to other viruses","year":2010,"lang":"en","type":"article","venue":"Virus Genes","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph; Environment and Climate Change Canada; Government of Newfoundland and Labrador; Memorial University of Newfoundland","funders":"","keywords":"Biology; Seabird; Host (biology); Waterfowl; Zoology; Avian influenza virus; Ecology; Pelagic zone; Influenza A virus subtype H5N1; Virus; Virology; Predation; Habitat","authors":[{"name":"Alissa Granter","is_ca":true},{"name":"Michelle Wille","is_ca":true},{"name":"Hugh Whitney","is_ca":true},{"name":"Gregory J. Robertson","is_ca":true},{"name":"Davor Ojkić","is_ca":true},{"name":"Andrew S. Lang","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1871040717847117,"gpt":0.3733711935840953,"spread":0.1862671217993837,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004005196,0.000185096,0.0001822475,0.0004308618,0.0003875877,0.0002383471,0.0001105695,0.0002822646,0.001061184],"category_scores_gemma":[0.0002194182,0.0000984146,0.0002347317,0.0004626812,0.0001796228,0.0001172241,0.0001232075,0.0003467237,0.0004065146],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001954489,"about_ca_system_score_gemma":0.000204281,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01332381,"about_ca_topic_score_gemma":0.02080769,"domain_scores_codex":[0.999967,0.000003649183,0.000002319031,0.00001184151,0.000006098568,0.000009143658],"domain_scores_gemma":[0.9997886,0.00005048026,0.00005458597,0.00001328563,0.00003579552,0.00005733762],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000477067,0.0000445758,0.02457554,0.00009179393,0.00003487083,0.0007274958,0.0005570316,0.0002052788,0.9671565,0.00006289182,0.0001770839,0.005889829],"study_design_scores_gemma":[0.00001488525,0.0006304689,0.9564599,0.00001999979,0.00007269856,0.001873948,0.001171154,0.0005956602,0.03395398,0.00004638778,0.005142888,0.00001789978],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975367,0.0001786049,0.0002920144,0.00003427005,0.00001115971,0.000006834682,0.0009239885,0.000007918501,0.001008465],"genre_scores_gemma":[0.9895802,0.0002378248,0.001628337,0.0000828421,0.00001238311,0.000007964806,0.006596637,0.00001176981,0.00184198],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01332381,"threshold_uncertainty_score":0.02649254,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2017523512","doi":"10.1007/s11262-013-0951-x","title":"The genome of a baculovirus isolated from Hemileuca sp. encodes a serpin ortholog","year":2013,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"ORFS; Biology; Serpin; Genome; Genetics; Gene; Phylogenetic tree; Retrotransposon; Subfamily; Open reading frame; Virology; Transposable element; Peptide sequence","authors":[{"name":"George F Rohrmann","is_ca":false},{"name":"Martin A. Erlandson","is_ca":true},{"name":"David A. Theilmann","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.007213797485253659,"gpt":0.2324919670697756,"spread":0.2252781695845219,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000871274,0.0003043567,0.0002284873,0.0003657652,0.0002448171,0.000373542,0.0001504229,0.0002730786,0.001277874],"category_scores_gemma":[0.0001433126,0.0001140164,0.0003238657,0.0001960297,0.000236705,0.0001851747,0.0002056918,0.0007622311,0.0005091305],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003505186,"about_ca_system_score_gemma":0.0002664113,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001043483,"about_ca_topic_score_gemma":0.0008961692,"domain_scores_codex":[0.9999632,0.000004392864,0.000002401192,0.00001224147,0.00001109515,0.000006756658],"domain_scores_gemma":[0.9998509,0.00005089953,0.00003258614,0.00001463543,0.00001643874,0.00003462576],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004668112,0.000007782814,0.0001927837,0.00002724938,0.000002935555,0.00005467724,0.00001706509,0.00001263778,0.9983965,0.0001107829,0.00001811655,0.001112798],"study_design_scores_gemma":[0.00005275695,0.0004743034,0.03629266,0.00006142659,0.00008930571,0.001890632,0.0001848845,0.001034008,0.9438802,0.0005837343,0.01543171,0.0000243344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9884728,0.001088925,0.00648514,0.0000921908,0.00006709639,0.0000539415,0.001167511,0.0001518895,0.002420531],"genre_scores_gemma":[0.9728266,0.0008507422,0.009717374,0.0001503995,0.00003744711,0.00005317645,0.00890908,0.00009013526,0.007364965],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001277874,"threshold_uncertainty_score":0.004274905,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2257088621","doi":"10.1007/s11262-016-1295-0","title":"Eimeria tenella: a novel dsRNA virus in E. tenella and its complete genome sequence analysis","year":2016,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Program for New Century Excellent Talents in University; Jilin University; National Natural Science Foundation of China; McMaster University","keywords":"Biology; Eimeria; Genome; Virology; Sequence (biology); Whole genome sequencing; Genetics; Virus; Sequence analysis; Gene; Computational biology","authors":[{"name":"Bin Wu","is_ca":false},{"name":"Xichen Zhang","is_ca":false},{"name":"Pengtao Gong","is_ca":false},{"name":"Mingying Li","is_ca":false},{"name":"Ding He","is_ca":false},{"name":"Caiyan Xin","is_ca":false},{"name":"Na Zhao","is_ca":false},{"name":"Jianhua Li","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.06546039100817573,"gpt":0.3142977034861834,"spread":0.2488373124780077,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001196077,0.0006713492,0.0004594885,0.0009467847,0.0002849357,0.0004255988,0.0003722262,0.0003677814,0.0008738129],"category_scores_gemma":[0.0002221917,0.000215106,0.0006322794,0.0009540279,0.0002495012,0.0003534465,0.0002595502,0.0005463176,0.0005757646],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003717506,"about_ca_system_score_gemma":0.0004444172,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002631186,"about_ca_topic_score_gemma":0.002469847,"domain_scores_codex":[0.9999003,0.000008472242,0.00001265311,0.00002767161,0.00002217122,0.00002865363],"domain_scores_gemma":[0.9997777,0.00004136758,0.00005771972,0.00002023092,0.0000374306,0.00006556514],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002801227,0.00002508981,0.0006580823,0.0001014544,0.000009847132,0.0001924383,0.00005898708,0.0000653705,0.9966863,0.00003853114,0.00003331813,0.001850348],"study_design_scores_gemma":[0.0001234373,0.001050175,0.1869777,0.0001203455,0.0006575978,0.004334483,0.001243033,0.002067228,0.7763082,0.0005300086,0.02649015,0.00009757349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9805777,0.002214241,0.005239317,0.0001280625,0.00007044349,0.0001184773,0.01003392,0.0001196564,0.00149809],"genre_scores_gemma":[0.9382634,0.002260464,0.01329646,0.0001481904,0.00003493637,0.0001110205,0.04221996,0.0001028733,0.003562744],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002631186,"threshold_uncertainty_score":0.005231738,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2325669925","doi":"10.1023/a:1008126816295","title":"Screening Predicted Coding Regions in Poxvirus Genomes","year":2000,"lang":"en","type":"article","venue":"Virus Genes","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Victoria","funders":"","keywords":"ORFS; Biology; Amino acid; Vaccinia; Gene; Virus; Genome; Poxviridae; Genetics; Virology; Open reading frame; Peptide sequence; Recombinant DNA","authors":[{"name":"Chris Upton","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03007258035608945,"gpt":0.2724198096041793,"spread":0.2423472292480898,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003026706,0.0004686831,0.0005079071,0.0009671943,0.0005305199,0.0004645167,0.0003256065,0.000512634,0.002461611],"category_scores_gemma":[0.00100466,0.0002357824,0.0006889205,0.0008454238,0.0002897252,0.0002735719,0.0002658612,0.0007435891,0.0007875147],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003591997,"about_ca_system_score_gemma":0.0004845289,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00134271,"about_ca_topic_score_gemma":0.002418027,"domain_scores_codex":[0.9998043,0.00003340248,0.00001451204,0.00005223461,0.00005496435,0.00004062515],"domain_scores_gemma":[0.9992981,0.000440632,0.00007069883,0.00003596663,0.00005678303,0.00009787546],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001000907,0.00009658065,0.006441449,0.0002825906,0.00003950721,0.0006632376,0.0001258637,0.0006002371,0.9827192,0.0003029916,0.0001879191,0.007539595],"study_design_scores_gemma":[0.0001780041,0.001983104,0.1493078,0.0001066941,0.0004529078,0.003222853,0.0005179546,0.01083396,0.821135,0.0006867388,0.0115308,0.00004426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9853614,0.001011693,0.007830041,0.00008147505,0.00003827526,0.0001451793,0.003988001,0.0001539581,0.00138994],"genre_scores_gemma":[0.9557831,0.0006606314,0.02158152,0.0001856171,0.00003109104,0.0001249687,0.01929692,0.00008160288,0.002254633],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002461611,"threshold_uncertainty_score":0.008234918,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1650307301","doi":"10.1023/a:1008122715387","title":"Induction of Apoptosis by Equine Arteritis Virus Infection","year":2000,"lang":"en","type":"article","venue":"Virus Genes","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université du Québec; Collège Montmorency; Université du Québec à Montréal","funders":"","keywords":"Biology; Virology; Programmed cell death; Vero cell; Cytopathic effect; Apoptosis; DNA fragmentation; Virus; Multiplicity of infection; Viral replication; Genetics","authors":[{"name":"Denis Archambault","is_ca":true},{"name":"Gilles St‐Laurent","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02289013530240788,"gpt":0.2284628664392134,"spread":0.2055727311368055,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003591654,0.0003809074,0.0004022416,0.0005919393,0.0004601701,0.0003985997,0.0002175492,0.0005115448,0.002128022],"category_scores_gemma":[0.0003921313,0.000203927,0.0004140109,0.0002680992,0.0003276396,0.0005106893,0.0002790978,0.0008379255,0.0004050049],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006649985,"about_ca_system_score_gemma":0.0002089911,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00101406,"about_ca_topic_score_gemma":0.001036213,"domain_scores_codex":[0.9995731,0.0001350258,0.00003218042,0.00004295675,0.00007314538,0.0001436105],"domain_scores_gemma":[0.9996608,0.0001392861,0.00004251561,0.00005560353,0.00006512805,0.00003649589],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001406298,0.0001772117,0.001673819,0.0001195029,0.00002136861,0.0003743742,0.0001453387,0.0001240265,0.9910842,0.0004372326,0.0001302594,0.00430635],"study_design_scores_gemma":[0.00005108272,0.001699659,0.02073971,0.00002135417,0.00002481991,0.001014556,0.0002108056,0.0006955976,0.9726042,0.0002037687,0.002727072,0.000007260556],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992467,0.003230203,0.001040604,0.00007960288,0.0000616293,0.00004435294,0.0001936764,0.00003366595,0.002849266],"genre_scores_gemma":[0.9942032,0.001238039,0.0006876978,0.00004408578,0.00003231995,0.00005652591,0.0003838647,0.000006815741,0.00334752],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002128022,"threshold_uncertainty_score":0.007119,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2091090964","doi":"10.1007/s11262-013-0926-y","title":"Evolution and homologous recombination of the hemagglutinin–esterase gene sequences from porcine torovirus","year":2013,"lang":"en","type":"article","venue":"Virus Genes","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Science North","funders":"Program for New Century Excellent Talents in University; Harbin Science and Technology Bureau; National Natural Science Foundation of China","keywords":"Biology; Genetics; Gene; Hemagglutinin (influenza); Homologous recombination; Molecular evolution; Monophyly; Recombination; Negative selection; Phylogenetics; Evolutionary biology; Clade; Genome","authors":[{"name":"Yingying Cong","is_ca":false},{"name":"Dante S. Zarlenga","is_ca":false},{"name":"Jüergen A. Richt","is_ca":false},{"name":"Xin Wang","is_ca":false},{"name":"Yang Wang","is_ca":true},{"name":"Siqingaowa Suo","is_ca":false},{"name":"Jingfei Wang","is_ca":false},{"name":"Yudong Ren","is_ca":false},{"name":"Xiaofeng Ren","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01671903899364115,"gpt":0.2025291506503367,"spread":0.1858101116566955,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004254058,0.0002859186,0.0001811947,0.0007003917,0.0003014061,0.0004361726,0.0003192365,0.0004403839,0.0004227484],"category_scores_gemma":[0.0004463569,0.0002475832,0.0005070858,0.0004695059,0.0003783682,0.0002419272,0.0003380131,0.0009021307,0.0002444257],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000608967,"about_ca_system_score_gemma":0.0002841048,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001595528,"about_ca_topic_score_gemma":0.001644399,"domain_scores_codex":[0.9997537,0.0000799564,0.00001590086,0.00004776974,0.00003565343,0.00006714658],"domain_scores_gemma":[0.9996934,0.0001310871,0.00005104891,0.00003936941,0.00003134636,0.00005384794],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003533426,0.00006627949,0.003605425,0.00003633365,0.0000201469,0.0002326399,0.0002246071,0.0004440894,0.9896671,0.0004569106,0.00002689669,0.004866215],"study_design_scores_gemma":[0.0001314021,0.001665468,0.268297,0.00007909539,0.000282852,0.004090241,0.001635503,0.007024392,0.7047839,0.000937841,0.01099258,0.00007973187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975216,0.0002274053,0.001121278,0.00002252283,0.000009051601,0.00001444846,0.00007335731,0.000004456597,0.001005884],"genre_scores_gemma":[0.997009,0.0001956799,0.001112273,0.00003106248,0.000005269651,0.00001032066,0.00056051,0.00001419707,0.001061882],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001595528,"threshold_uncertainty_score":0.004418373,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2046292205","doi":"10.1023/b:viru.0000012268.35297.ff","title":"Upregulation of LMP1 Expression by Histone Deacetylase Inhibitors in an EBV Carrying NPC Cell Line","year":2004,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral-associated cancers and disorders","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Cancerfonden; Cancer Research Society; Cancer Research Institute","keywords":"Trichostatin A; Cell culture; Epstein–Barr virus; Chromatin immunoprecipitation; Histone deacetylase; Histone deacetylase inhibitor; Biology; Vorinostat; Sodium butyrate; Molecular biology; Acetylation; Nasopharyngeal carcinoma; Chromatin; Histone; Cancer research; Virus; Virology; Gene expression; Promoter; Medicine; Gene; Biochemistry","authors":[{"name":"Jun Nishikawa","is_ca":false},{"name":"Lóránd Kis","is_ca":false},{"name":"Anquan Liu","is_ca":false},{"name":"Xiangning Zhang","is_ca":false},{"name":"Miki Takahara","is_ca":false},{"name":"Kentaro Bandobashi","is_ca":false},{"name":"Csaba Kiss","is_ca":false},{"name":"Noémi Nagy","is_ca":false},{"name":"Kiwamu Okita","is_ca":false},{"name":"George Klein","is_ca":false},{"name":"Eva Klein","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01403990820481463,"gpt":0.2815147455396481,"spread":0.2674748373348335,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001874695,0.0002731169,0.0004769919,0.0003862047,0.0003776495,0.0004333988,0.0002992332,0.0003009131,0.00211033],"category_scores_gemma":[0.0001978453,0.0001708479,0.0002964454,0.0003797688,0.0002691371,0.0003337933,0.0002084136,0.0008707793,0.0006814588],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004152709,"about_ca_system_score_gemma":0.0002686711,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001989092,"about_ca_topic_score_gemma":0.002006662,"domain_scores_codex":[0.9998079,0.00002945707,0.00002618524,0.00003209002,0.00005787133,0.00004638974],"domain_scores_gemma":[0.9998071,0.00007535072,0.00001966138,0.00004115732,0.00002505503,0.00003176805],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000148312,0.0000416365,0.000124985,0.00001783469,0.000003095116,0.00009416169,0.00003038334,0.00003391053,0.9988955,0.00008577919,0.00005403359,0.0004701686],"study_design_scores_gemma":[0.00001302621,0.0002224819,0.002619797,0.000001867096,0.00001466336,0.0002363258,0.00005359267,0.0005929979,0.9948204,0.00002984432,0.001391465,0.000003520286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930329,0.001024747,0.002278768,0.0001480588,0.00006873527,0.00003141584,0.00104262,0.0001212824,0.002251394],"genre_scores_gemma":[0.9874795,0.0006886662,0.002938953,0.00004338087,0.00003414128,0.00008080905,0.002169623,0.00003437055,0.006530567],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00211033,"threshold_uncertainty_score":0.007059753,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3154889855","doi":"10.1007/s11262-021-01834-z","title":"Detection of mink astrovirus in Poland and further phylogenetic comparison with other European and Canadian astroviruses","year":2021,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"","funders":"","keywords":"Mink; Astrovirus; Biology; Phylogenetic tree; Molecular epidemiology; Danish; Virology; Genetics; DNA sequencing; Virus; Gene; Genotype; Ecology; Rotavirus","authors":[{"name":"A. Jakubczak","is_ca":false},{"name":"Marek Kowalczyk","is_ca":false},{"name":"Ilona Mazurkiewicz","is_ca":false},{"name":"Marcin Kondracki","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02596032697025144,"gpt":0.2816068768209371,"spread":0.2556465498506857,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002773302,0.0002768634,0.0002658006,0.00164526,0.0007154288,0.0007276495,0.000133092,0.0002536698,0.0003108356],"category_scores_gemma":[0.0004751472,0.0001436134,0.0002446092,0.001081159,0.0004505457,0.0002146866,0.0006021633,0.0001741751,0.0001055237],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000765973,"about_ca_system_score_gemma":0.0006934392,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0381714,"about_ca_topic_score_gemma":0.05780883,"domain_scores_codex":[0.9996287,0.00002656807,0.00003358067,0.0001148774,0.00008386961,0.0001123966],"domain_scores_gemma":[0.9997787,0.00001818898,0.00008435486,0.00001434619,0.0000597053,0.00004464051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005935138,0.00003969106,0.8370327,0.0001634488,0.0001090188,0.002080717,0.003485898,0.0001909817,0.1423394,0.0001600201,0.0001024483,0.01370211],"study_design_scores_gemma":[0.000004639181,0.00006878287,0.9901863,0.00002267701,0.00003468893,0.001851947,0.001965684,0.0001141024,0.003559963,0.00002731499,0.00215628,0.000007657386],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998691,0.0004003739,0.000146431,0.00001127638,0.000002289462,0.000008566006,0.000100608,0.00000243965,0.0006370905],"genre_scores_gemma":[0.9983888,0.0004455544,0.0004564829,0.00002127132,0.000002504688,0.000007151807,0.0003642072,0.000002807009,0.0003112126],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9618286,"threshold_uncertainty_score":0.07589847,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2107177711","doi":"10.1023/a:1014077719162","title":"High Level of Sequence Variation in the 3′ Noncoding Region of Japanese Encephalitis Viruses Isolated in Korea","year":2002,"lang":"en","type":"article","venue":"Virus Genes","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases; University of Queensland","keywords":"Biology; Japanese encephalitis; Virology; Sequence (biology); Medical microbiology; Variation (astronomy); Evolutionary biology; Genetics; Zoology; Encephalitis; Virus","authors":[{"name":"Jae‐Hwan Nam","is_ca":true},{"name":"Soo-Lim Chae","is_ca":true},{"name":"Yongseok Jeong","is_ca":true},{"name":"Myungsoo Joo","is_ca":true},{"name":"C. Yong Kang","is_ca":true},{"name":"Hae-Wol Cho","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1301256784635502,"gpt":0.3071866324227727,"spread":0.1770609539592225,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001236817,0.0001898273,0.0002447345,0.0005137559,0.0003475391,0.0002899103,0.0001387119,0.0002364614,0.00047973],"category_scores_gemma":[0.0002894852,0.0001473821,0.0003127691,0.0003977072,0.0002636734,0.0001276809,0.0001690867,0.0003541793,0.0001246859],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001945531,"about_ca_system_score_gemma":0.0001866665,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003473246,"about_ca_topic_score_gemma":0.006064548,"domain_scores_codex":[0.9997943,0.00002682904,0.00001995816,0.0000748934,0.00003792735,0.00004614964],"domain_scores_gemma":[0.9996773,0.00006611761,0.00009121646,0.00002078528,0.00006796147,0.00007674152],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004166177,0.00006271251,0.07371127,0.00005447851,0.0001139744,0.0003553875,0.000637,0.0001323571,0.9213459,0.00009045867,0.00006131975,0.00301847],"study_design_scores_gemma":[0.00001727224,0.0003117731,0.9762816,0.0000118605,0.0001020046,0.001056948,0.0005340492,0.0004107532,0.02036783,0.00007164801,0.0008191406,0.00001503432],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994761,0.00007779429,0.0001181286,0.000007223648,0.000003310057,0.000003095814,0.00009719085,0.000001539596,0.0002156111],"genre_scores_gemma":[0.9993227,0.00003034015,0.0001475375,0.00002597738,0.000003553724,0.000003436146,0.0002866701,0.00000230021,0.0001774985],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003473246,"threshold_uncertainty_score":0.006906092,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W3002853857","doi":"10.1007/s11262-020-01734-8","title":"The ea22 gene of lambdoid phages: preserved prolysogenic function despite of high sequence diversity","year":2020,"lang":"en","type":"article","venue":"Virus Genes","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada; Narodowe Centrum Nauki","keywords":"Biology; Lysogenic cycle; Gene; Genetics; Lytic cycle; Integrase; Sequence (biology); Function (biology); Open reading frame; Bacteriophage; Functional diversity; Computational biology; Evolutionary biology; Peptide sequence; Escherichia coli; Virus","authors":[{"name":"Aleksandra Dydecka","is_ca":false},{"name":"Sylwia Bloch","is_ca":false},{"name":"Agnieszka Necel","is_ca":false},{"name":"Gracja Topka","is_ca":false},{"name":"Alicja Węgrzyn","is_ca":false},{"name":"Jinge Tong","is_ca":true},{"name":"Logan W. Donaldson","is_ca":true},{"name":"Grzegorz Węgrzyn","is_ca":false},{"name":"Bożena Nejman-Faleńczyk","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03437048026855765,"gpt":0.2257251425367253,"spread":0.1913546622681677,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001159692,0.0003014955,0.0002461939,0.0003112538,0.0001179553,0.0005275765,0.0001248095,0.0001876,0.0006847695],"category_scores_gemma":[0.0002311117,0.00008119326,0.0001591979,0.0002665389,0.000160152,0.0001976409,0.0002498845,0.0002874221,0.0003074],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001255328,"about_ca_system_score_gemma":0.0001303507,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005360559,"about_ca_topic_score_gemma":0.0003935823,"domain_scores_codex":[0.9999039,0.00001309209,0.000007652542,0.00002619318,0.00002215382,0.00002695789],"domain_scores_gemma":[0.9998129,0.00003554222,0.00004258945,0.00002616004,0.00002709131,0.00005583305],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004332826,0.000005609519,0.001122256,0.000009592587,0.000003168242,0.00004288784,0.00002413053,0.00002188678,0.9978735,0.00002949432,0.00000282618,0.0008212213],"study_design_scores_gemma":[0.00001134401,0.0003998824,0.1074053,0.00001523841,0.00003520356,0.001557704,0.000256565,0.0008998547,0.885081,0.0001613149,0.004159978,0.00001656809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986815,0.0002620792,0.0006137518,0.00001126608,0.000002729429,0.000003025695,0.0001025059,0.000009670854,0.0003134961],"genre_scores_gemma":[0.9971335,0.0001183308,0.0007179103,0.00001077366,0.000003750183,0.000004823825,0.0004976647,0.00001496254,0.001498255],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006847695,"threshold_uncertainty_score":0.002290785,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2616420948","doi":"10.1007/s11262-017-1468-5","title":"Molecular diversity among viroids infecting chrysanthemum in India","year":2017,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Sherbrooke","funders":"Japan Society for the Promotion of Science","keywords":"Biology; Diversity (politics); Botany; Anthropology","authors":[{"name":"Charith Raj Adkar‐Purushothama","is_ca":true},{"name":"K. Poornachandra Rao","is_ca":false},{"name":"M. Y. Sreenivasa","is_ca":false},{"name":"P. K. Maheshwar","is_ca":false},{"name":"M. N. Nagendra Prasad","is_ca":false},{"name":"Teruo Sano","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03673341699555622,"gpt":0.2642353530659879,"spread":0.2275019360704317,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001159042,0.0001535129,0.000205379,0.001852554,0.0008526126,0.0006915148,0.0003018392,0.0002509434,0.0009368623],"category_scores_gemma":[0.0002706267,0.0001704414,0.0002659112,0.001053152,0.0004525265,0.0002301198,0.0003367946,0.0003762354,0.000258703],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005021587,"about_ca_system_score_gemma":0.0003055423,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008007769,"about_ca_topic_score_gemma":0.008474266,"domain_scores_codex":[0.9998074,0.00001977766,0.00001384204,0.00007047293,0.00003010762,0.00005841687],"domain_scores_gemma":[0.9996043,0.0001372728,0.00006191725,0.00002750776,0.00006644362,0.0001025206],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005673124,0.00008770122,0.1165978,0.000104139,0.00005341401,0.0004745998,0.004956357,0.0001600934,0.8692684,0.0004171453,0.00007348748,0.007239617],"study_design_scores_gemma":[0.00001196591,0.0003300332,0.9735607,0.000009442098,0.00004905319,0.00103717,0.00259874,0.00019405,0.02002581,0.00009984544,0.002065889,0.00001715371],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991593,0.00006827463,0.00009056986,0.000012413,0.000001351402,0.000005514658,0.0001333612,0.000004826642,0.0005243939],"genre_scores_gemma":[0.9987686,0.00007528925,0.0001392319,0.00001252877,0.000002260661,0.000005593782,0.0004105698,0.000003009101,0.0005827993],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008007769,"threshold_uncertainty_score":0.01592231,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W175469969","doi":"10.1023/a:1014580802250","title":"Sequence Analysis of Porcine Adenovirus Serotype 5 Fibre Gene: Evidence for Recombination","year":2002,"lang":"en","type":"article","venue":"Virus Genes","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"Hungarian Scientific Research Fund","keywords":"Biology; Recombination; Gene; Serotype; Genetics; Sequence analysis; Sequence (biology); Virology; Medical microbiology; Adenovirus genome; Adenoviridae; Computational biology; Genetic enhancement","authors":[{"name":"Miklós Nagy","is_ca":false},{"name":"Éva Nagy","is_ca":true},{"name":"Tamás Tuboly","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.1115546949794954,"gpt":0.3677390088476677,"spread":0.2561843138681723,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002914801,0.0004516805,0.0004125666,0.000848664,0.0004598774,0.0004142867,0.0004239084,0.000754355,0.001785525],"category_scores_gemma":[0.0006914404,0.000317689,0.000978083,0.0003866092,0.0005404426,0.0003190071,0.0002153307,0.0009172505,0.001276945],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000445204,"about_ca_system_score_gemma":0.0004265172,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002531102,"about_ca_topic_score_gemma":0.001428287,"domain_scores_codex":[0.9998073,0.00004017242,0.00001679194,0.00005111807,0.00003537672,0.00004928416],"domain_scores_gemma":[0.9988338,0.0005450897,0.0001775247,0.000106246,0.0001344222,0.0002028957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004115401,0.00004384412,0.0004543247,0.00007026659,0.00001149057,0.0003661202,0.0001032214,0.0001009931,0.9967212,0.0002844014,0.00002996349,0.001402515],"study_design_scores_gemma":[0.00007305825,0.001600618,0.0305635,0.00005449584,0.0001647724,0.00251668,0.0002753317,0.001437792,0.9578596,0.0004055925,0.005006773,0.00004167572],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9819708,0.0008701952,0.01318782,0.0001171047,0.00005112614,0.00007120393,0.0006425559,0.00006083127,0.003028311],"genre_scores_gemma":[0.983263,0.000673169,0.007874021,0.0001181697,0.00003789486,0.00005242948,0.004273742,0.00004660809,0.003661068],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002531102,"threshold_uncertainty_score":0.00597316,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2131964832","doi":"10.1007/s11262-013-0908-0","title":"The triple gene block movement proteins of a grape virus in the genus Foveavirus confer limited cell-to-cell spread of a mutant Potato virus X","year":2013,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Potato virus X; Nicotiana benthamiana; Gene; Virology; Virus; Movement protein; Potexvirus; Cell biology; Fusion protein; Green fluorescent protein; Genetics; Plant virus; RNA; Recombinant DNA","authors":[{"name":"Krinpreet Mann","is_ca":true},{"name":"Baozhong Meng","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.03070260733628668,"gpt":0.24052760778539,"spread":0.2098250004491033,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001426906,0.0003373199,0.0002068534,0.000198987,0.0002056422,0.0003646558,0.0001620514,0.0003080398,0.0009932417],"category_scores_gemma":[0.0002175587,0.0002147356,0.0002450062,0.00006701232,0.0002859994,0.0002925087,0.0004002913,0.0005510198,0.0003430051],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004149384,"about_ca_system_score_gemma":0.0002314365,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001159754,"about_ca_topic_score_gemma":0.001643646,"domain_scores_codex":[0.9998634,0.00003061865,0.00001107917,0.00002864569,0.00003370596,0.00003247164],"domain_scores_gemma":[0.9997367,0.0001043711,0.00004547827,0.00003729609,0.00001417858,0.00006190354],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002459566,0.000002689217,0.00007149153,0.000003234517,0.000001076375,0.00001620847,0.000006465621,0.00001390404,0.9996904,0.0000511939,0.000002601132,0.0001161965],"study_design_scores_gemma":[0.00001550134,0.0003299614,0.007353811,0.000004891675,0.00001826983,0.0006184255,0.0001005128,0.001559685,0.9887127,0.0001079474,0.001171085,0.000007178196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985461,0.0001905865,0.000695396,0.0000133922,0.000003541554,0.000004633891,0.00001847159,0.00001447512,0.0005133529],"genre_scores_gemma":[0.9982297,0.00009197577,0.0006521468,0.000008444941,0.000001871236,0.00000432437,0.0001098875,0.00001830723,0.0008832823],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001159754,"threshold_uncertainty_score":0.00332278,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2530594033","doi":"10.1007/s11262-016-1395-x","title":"Construction of a full-length infectious cDNA clone of Cowpea mild mottle virus","year":2016,"lang":"en","type":"article","venue":"Virus Genes","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"","funders":"Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Vale Canada Limited","keywords":"Biology; Complementary DNA; Virology; Cauliflower mosaic virus; RNA; Transcription (linguistics); Molecular biology; Virus; Gene; Genetics","authors":[{"name":"Silvia Leão de Carvalho","is_ca":false},{"name":"Tatsuya Nagata","is_ca":false},{"name":"Bruna Junqueira","is_ca":false},{"name":"Larissa G. Zanardo","is_ca":false},{"name":"Ana Carolina Silva Paiva","is_ca":false},{"name":"Claudine M. Carvalho","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.02998709284278241,"gpt":0.24757046313314,"spread":0.2175833702903575,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000405078,0.0007494104,0.000817412,0.0005963726,0.000668782,0.0006361794,0.0008416048,0.0006170633,0.002516035],"category_scores_gemma":[0.0003813848,0.0005853187,0.0008675266,0.0006073753,0.0004356412,0.0006515662,0.0004974282,0.001888537,0.001517528],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008359131,"about_ca_system_score_gemma":0.0008756967,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002609079,"about_ca_topic_score_gemma":0.001851512,"domain_scores_codex":[0.9998097,0.00002134328,0.00001936571,0.00005200574,0.00004831103,0.0000493722],"domain_scores_gemma":[0.9997266,0.00009132227,0.00003119751,0.00002944931,0.00004546584,0.00007600992],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007650231,0.00003949879,0.0001028145,0.0001042022,0.00001081006,0.00010805,0.00009063024,0.00007783298,0.9974502,0.0005286022,0.000104641,0.001306268],"study_design_scores_gemma":[0.0001407696,0.000564713,0.007011743,0.00004845266,0.0001366981,0.0007011518,0.0002597401,0.002760484,0.9574226,0.0005921504,0.03029537,0.0000661681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9192823,0.002431376,0.05836089,0.0009450751,0.0006592681,0.0009931736,0.0106844,0.0004939357,0.006149551],"genre_scores_gemma":[0.7819449,0.004677732,0.1074776,0.0005169828,0.0002594576,0.0008229252,0.06459149,0.0003508766,0.03935801],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002609079,"threshold_uncertainty_score":0.008416951,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1980587038","doi":"10.1007/s11262-013-0986-z","title":"Mamestra configurata nucleopolyhedrovirus-A transcriptome from infected host midgut","year":2013,"lang":"en","type":"article","venue":"Virus Genes","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false},"ca_institutions":"BC Research (Canada); National Association of Friendship Centres","funders":"Agriculture and Agri-Food Canada","keywords":"Biology; Midgut; Transcriptome; ORFS; Gene; Virology; Infectivity; Virus; Gene expression; Host (biology); Genetics; Open reading frame; Larva","authors":[{"name":"B. Cameron Donly","is_ca":true},{"name":"David A. Theilmann","is_ca":true},{"name":"Dwayne D. Hegedus","is_ca":true},{"name":"Douglas Baldwin","is_ca":true},{"name":"Martin A. Erlandson","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.009371828792575084,"gpt":0.2372132155385687,"spread":0.2278413867459936,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004884795,0.0003125687,0.0003307787,0.0002745999,0.0003861917,0.0004484618,0.0001411107,0.0002675019,0.001099323],"category_scores_gemma":[0.00008327951,0.0002193709,0.0002977702,0.0001753385,0.0001243473,0.0003193326,0.0002300568,0.0007364485,0.0004721727],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002677193,"about_ca_system_score_gemma":0.0001697646,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001077248,"about_ca_topic_score_gemma":0.001869358,"domain_scores_codex":[0.9999533,0.000002559413,0.000002426906,0.00002132418,0.000008569556,0.00001191014],"domain_scores_gemma":[0.9999272,0.00002020591,0.00001180158,0.000008121247,0.00001025591,0.00002245638],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006181734,0.000003849857,0.0004747513,0.00001823021,0.000002916289,0.00003244208,0.00002607137,0.00001298802,0.9988444,0.00003669104,0.00002737702,0.0004585805],"study_design_scores_gemma":[0.00002393966,0.000292703,0.3191502,0.00003432447,0.00007994314,0.001234484,0.0005558577,0.002053498,0.6650516,0.0002578055,0.01123842,0.00002722877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9896263,0.001050392,0.002505729,0.00009188533,0.0000414662,0.00002874006,0.004011957,0.00008476999,0.002558799],"genre_scores_gemma":[0.9650402,0.0008120146,0.004556514,0.0001907626,0.00004368592,0.00007478504,0.01828259,0.0001423561,0.0108571],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001099323,"threshold_uncertainty_score":0.003677607,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2043680932","doi":"10.1007/s11262-014-1040-5","title":"Genetic diversity of 3′ region of glycoprotein D gene of bovine herpesvirus 1 and 5","year":2014,"lang":"en","type":"article","venue":"Virus Genes","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Université de Montréal","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Biology; Phylogenetic tree; Gene; Virology; Phylogenetics; Genetics; Sequence analysis; Virus; Genotype","authors":[{"name":"Carolina Kist Traesel","is_ca":true},{"name":"Mariana Sá e Silva","is_ca":false},{"name":"Marcelo Weiss","is_ca":false},{"name":"Fernando Rosado Spilki","is_ca":false},{"name":"Rudi Weiblen","is_ca":false},{"name":"Eduardo Furtado Flores","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.0193855951356237,"gpt":0.2445935718633116,"spread":0.2252079767276879,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001214659,0.0001708394,0.0002334259,0.0006480746,0.0002603889,0.0003322572,0.0002069356,0.0002401359,0.001072696],"category_scores_gemma":[0.0003319482,0.0001345458,0.0003841392,0.0003898598,0.0002703814,0.0001295311,0.000189332,0.0005313949,0.0001953662],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003944767,"about_ca_system_score_gemma":0.0002362401,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002315063,"about_ca_topic_score_gemma":0.001985544,"domain_scores_codex":[0.9997948,0.00003521672,0.00001271758,0.0000683404,0.0000397025,0.00004917997],"domain_scores_gemma":[0.9997628,0.0001011598,0.00005064888,0.00001742541,0.00002247873,0.00004536064],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004051862,0.00004039614,0.01014962,0.00004355684,0.00002692688,0.0002909698,0.0002614188,0.00008464024,0.9837299,0.0004318989,0.00005083349,0.004484646],"study_design_scores_gemma":[0.0001086291,0.00130576,0.6487726,0.00009219034,0.0002712654,0.006038004,0.001060824,0.002053095,0.3266982,0.00128817,0.01225479,0.00005648719],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970336,0.0004149264,0.0009630146,0.00003785193,0.00001406739,0.00001082509,0.00032158,0.000005398085,0.001198724],"genre_scores_gemma":[0.9981504,0.000131033,0.0005579332,0.00006268595,0.000005954202,0.000005884688,0.0006019449,0.000004478743,0.0004796586],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002315063,"threshold_uncertainty_score":0.004603148,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W167961029","doi":"10.1023/a:1025768308631","title":"Evolution of Surface and Nonstructural-1 Genes of Influenza B Viruses Isolated in the Province of Québec, Canada, during the 1998–2001 Period","year":2003,"lang":"en","type":"article","venue":"Virus Genes","topic":"Infectious Encephalopathies and Encephalitis","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true},"ca_institutions":"Canadian Science Centre for Human and Animal Health; Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Biology; Antigenicity; Hemagglutinin (influenza); Virology; Neuraminidase; Hemagglutination assay; Influenzavirus B; Sequence analysis; Gene; Virus; Influenza A virus; Antigen; Orthomyxoviridae; Genetics; Titer","authors":[{"name":"Yacine Abed","is_ca":true},{"name":"Michael B. Coulthart","is_ca":true},{"name":"Yàn Li","is_ca":true},{"name":"Guy Boivin","is_ca":true}],"retraction":null,"screen_n_in":null,"score":{"opus":0.01034071485920902,"gpt":0.2319309091966485,"spread":0.2215901943374395,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000405673,0.0004111411,0.0003633484,0.001598249,0.001922962,0.001054136,0.0007665491,0.0006123935,0.001062691],"category_scores_gemma":[0.00112229,0.0002196376,0.0003124898,0.002474566,0.0007488372,0.0002715005,0.0003587209,0.0006275988,0.0002170045],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01556744,"about_ca_system_score_gemma":0.008537797,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9697825,"about_ca_topic_score_gemma":0.9772698,"domain_scores_codex":[0.9995722,0.00003230856,0.00001585583,0.00008600577,0.0001172323,0.0001764138],"domain_scores_gemma":[0.998681,0.00008945051,0.0001883685,0.00002142063,0.0008008002,0.0002189874],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001227914,0.0001259386,0.9213887,0.0001076994,0.000157277,0.0006998837,0.004238627,0.00119664,0.04993358,0.0005003827,0.001369997,0.01905336],"study_design_scores_gemma":[0.000006094043,0.00004419941,0.9963446,0.00001425545,0.00001555775,0.0001596458,0.001113069,0.0004000817,0.0005718584,0.00001300804,0.001309016,0.000008594036],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967058,0.0006482135,0.0001065616,0.00009412424,0.000009601194,0.00001658781,0.0008608261,0.000004025233,0.00155421],"genre_scores_gemma":[0.997056,0.0002710604,0.000243316,0.00009300001,0.000003846543,0.000007331604,0.0009028001,0.000005208256,0.001417475],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03021747,"threshold_uncertainty_score":0.1129502,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W1990164388","doi":"10.1007/s11262-013-0891-5","title":"Influence of minor displacements in loops of the porcine parvovirus VP2 capsid on virus-like particles assembly and the induction of antibody responses","year":2013,"lang":"en","type":"article","venue":"Virus Genes","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Capsid; Biology; Parvovirus; Minute virus of mice; Porcine parvovirus; Parvoviridae; Virology; Virus; Antibody; Canine parvovirus; Cell biology; Molecular biology; Genetics","authors":[{"name":"Qunxing Pan","is_ca":true},{"name":"Kongwang He","is_ca":false},{"name":"Yongshan Wang","is_ca":false},{"name":"Xiaoli Wang","is_ca":false},{"name":"Wei Ouyang","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.021054366067806,"gpt":0.2557504301081919,"spread":0.2346960640403859,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001629922,0.0002098627,0.0001527932,0.00007181218,0.0001651862,0.0003395337,0.0001800469,0.0001964593,0.00186433],"category_scores_gemma":[0.0004036801,0.0001658691,0.0001682137,0.00006550448,0.0004102345,0.0002021599,0.0001877896,0.0004501761,0.0002042263],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002267422,"about_ca_system_score_gemma":0.0001921465,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007653441,"about_ca_topic_score_gemma":0.0008024682,"domain_scores_codex":[0.9998876,0.00003257503,0.000008406549,0.00001926706,0.00001505039,0.00003707502],"domain_scores_gemma":[0.9996917,0.0001471632,0.00004001686,0.00002481277,0.00002244017,0.0000738504],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007834791,0.00004066542,0.0003270762,0.00002088331,0.000006367192,0.00004708902,0.00002678296,0.0001465508,0.9979953,0.00007684495,0.00001604742,0.000512844],"study_design_scores_gemma":[0.00004263109,0.0005704154,0.004766297,0.00000436259,0.0000175427,0.00005976807,0.0000639417,0.001036279,0.992724,0.0000556565,0.0006521152,0.000007085613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999172,0.0001393207,0.0002198839,0.00001855166,0.00001319143,0.000004141235,0.00002156737,0.000005058075,0.0004063036],"genre_scores_gemma":[0.9992594,0.00006011698,0.0001563685,0.00002477908,0.000005178295,0.000004415919,0.00004886293,0.000007967765,0.0004328945],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00186433,"threshold_uncertainty_score":0.006236851,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null},{"id":"W2891152511","doi":"10.1007/s11262-018-1594-8","title":"Complete genome sequence of a novel sea otterpox virus","year":2018,"lang":"en","type":"article","venue":"Virus Genes","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":8,"is_retracted":false,"has_abstract":false,"routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false},"ca_institutions":"Fisheries and Oceans Canada; University of Victoria","funders":"University of Florida","keywords":"Biology; Genome; Sequence (biology); Whole genome sequencing; Computational biology; Genetics; Virus; Virology; Evolutionary biology; Gene","authors":[{"name":"Jessica M. Jacob","is_ca":false},{"name":"Kuttichantran Subramaniam","is_ca":false},{"name":"Shin-Lin Tu","is_ca":true},{"name":"Ole Nielsen","is_ca":true},{"name":"Pamela A. Tuomi","is_ca":false},{"name":"Chris Upton","is_ca":true},{"name":"Thomas B. Waltzek","is_ca":false}],"retraction":null,"screen_n_in":null,"score":{"opus":0.04764260964683063,"gpt":0.2779749994532274,"spread":0.2303323898063968,"validation_status":"score_only:v0-immature-baseline"},"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008847233,0.0005933113,0.0004501261,0.000596181,0.0005374702,0.0005092077,0.0003428052,0.0005317329,0.001926023],"category_scores_gemma":[0.0002025072,0.000230541,0.0006131571,0.0004436109,0.0004187362,0.0002590298,0.0002262169,0.0007939496,0.0007451803],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009196706,"about_ca_system_score_gemma":0.001424632,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01664296,"about_ca_topic_score_gemma":0.01878892,"domain_scores_codex":[0.9999266,0.000004646572,0.000005256872,0.00002725249,0.00001765106,0.00001858352],"domain_scores_gemma":[0.9997929,0.00005088513,0.00003272333,0.00001458974,0.00003560909,0.00007322526],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007922461,0.00005892371,0.002395805,0.000363416,0.00004785341,0.0007607982,0.0002814945,0.0003713735,0.987197,0.0004022546,0.0008612993,0.006467401],"study_design_scores_gemma":[0.0003052865,0.001728967,0.445187,0.0003314998,0.001106062,0.004383794,0.001526848,0.003183936,0.3790716,0.001374677,0.1615605,0.0002398807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9460373,0.004167553,0.007470402,0.0004380739,0.0003652035,0.0001582789,0.03748384,0.0002011255,0.003678271],"genre_scores_gemma":[0.829659,0.003708928,0.01321093,0.0003714254,0.0001154656,0.0001587866,0.1372223,0.0001546592,0.01539861],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01664296,"threshold_uncertainty_score":0.03309214,"prediction_status":"machine_predicted_unvalidated"},"labels":[],"label_agreement":null}]}