{"id":"W1013702198","doi":"10.1007/978-3-642-37146-2_2","title":"Comparative Genomics and the Comparative Methods","year":2013,"lang":"en","type":"book-chapter","venue":"SpringerBriefs in genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Genomics; Phenotype; Comparative genomics; Biology; Functional genomics; Computational biology; Genetics; Gene; Genotype; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003823604,0.0005242468,0.0007334013,0.00006621939,0.0001102026,0.00006084139,0.0004718343,0.0004957782,0.0001122273],"category_scores_gemma":[0.00001955025,0.0004239298,0.0001427647,0.00002925264,0.00114975,0.000002138318,0.0004918206,0.0004972171,0.00005207915],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003229758,"about_ca_system_score_gemma":0.0001339124,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001840415,"about_ca_topic_score_gemma":0.00007091317,"domain_scores_codex":[0.9981243,0.0001644379,0.0005335531,0.000673265,0.000167576,0.0003368842],"domain_scores_gemma":[0.9986362,0.0001332974,0.0002696112,0.0007296009,0.0001154649,0.0001158511],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0009470325,0.0001427777,0.0002584392,0.0002315081,0.001729632,0.000004517622,0.008670856,0.006232873,0.01380735,0.9223134,0.01253761,0.03312403],"study_design_scores_gemma":[0.002793284,0.0004799203,0.005712654,0.0001080072,0.0002257373,0.00003447322,0.0002529687,0.0003610111,0.01188895,0.1075436,0.8693212,0.001278265],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"other","genre_gemma":"methods","genre_scores_codex":[0.04601602,0.07014403,0.01737554,0.0002415291,0.0009851579,0.002734327,0.00008626468,0.00002997984,0.8623871],"genre_scores_gemma":[0.1247417,0.008093075,0.5216544,0.001106471,0.001606753,0.0002245703,0.0001813363,0.0002330563,0.3421586],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8567836,"threshold_uncertainty_score":0.9998212,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03711196679492049,"score_gpt":0.3079368742285391,"score_spread":0.2708249074336186,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}