{"id":"W1023129440","doi":"10.1038/srep11353","title":"Reassortment and distinct evolutionary dynamics of Rift Valley Fever virus genomic segments","year":2015,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo; CancerCare Manitoba Foundation","keywords":"Reassortment; Viral phylodynamics; Biology; Bunyaviridae; Phlebovirus; Evolutionary biology; Virology; Clade; Rift Valley fever; Evolutionary dynamics; Balancing selection; Genetics; Population; Phylogenetics; Virus; Gene; Disease; Genetic variation; Infectious disease (medical specialty); Coronavirus disease 2019 (COVID-19); Demography","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006441789,0.0001000068,0.0001889194,0.0001345411,0.000119551,0.00003030507,0.00002950148,0.00005005846,0.00007894185],"category_scores_gemma":[0.0001050656,0.00008208888,0.00006247713,0.0002165687,0.0002061439,0.00008538874,0.0000750455,0.00007083147,0.00001285003],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002364831,"about_ca_system_score_gemma":0.0002162352,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003006076,"about_ca_topic_score_gemma":0.00009435289,"domain_scores_codex":[0.9987146,0.00002295925,0.000369298,0.0003724972,0.0003558561,0.0001648047],"domain_scores_gemma":[0.9989603,0.000008027589,0.0001958646,0.0004437903,0.0001881982,0.0002038671],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000579728,0.0006780833,0.938735,0.000071609,0.0001236488,0.0004330244,0.000338937,0.0000687648,0.01625658,0.0001921802,0.0406117,0.00243251],"study_design_scores_gemma":[0.001141499,0.0004615304,0.9346334,0.0001336691,0.0002685718,0.002696657,0.0002225438,0.004256927,0.002998814,0.008678028,0.0441669,0.0003414771],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992826,0.0002486665,0.0001617901,0.00008776649,0.002918742,0.0002729746,0.00001030034,0.00003336779,0.003440424],"genre_scores_gemma":[0.9934267,0.000006158338,0.0005170799,0.00001280713,0.0000475285,0.000008951738,0.0001334992,0.00001055584,0.005836756],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01325777,"threshold_uncertainty_score":0.3347487,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02407538804861751,"score_gpt":0.2730133972465357,"score_spread":0.2489380091979182,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}