{"id":"W1118697810","doi":"10.1007/s12275-015-5100-x","title":"D101 is critical for the function of AttJ, a repressor of quorum quenching system in Agrobacterium tumefaciens","year":2015,"lang":"en","type":"article","venue":"The Journal of Microbiology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biomedical Research Council; National Research Foundation Singapore; Institute for Catastrophic Loss Reduction","keywords":"Agrobacterium tumefaciens; Repressor; Transcription factor; Cell biology; Biology; Gene; Biochemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007708607,0.00006360783,0.0001660603,0.00002583187,0.0000320664,0.000003087785,0.0001587984,0.0001076598,0.000001432983],"category_scores_gemma":[0.0001179887,0.00003178585,0.00007252664,0.00003499009,0.0001126065,0.000003963914,0.00002631698,0.00007965092,6.52114e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000133689,"about_ca_system_score_gemma":0.00007674142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004328056,"about_ca_topic_score_gemma":0.000101198,"domain_scores_codex":[0.999324,0.0001448501,0.0003263925,0.00006759088,0.00003185198,0.0001053417],"domain_scores_gemma":[0.9993063,0.00006748408,0.0002410751,0.0001296411,0.0002346016,0.00002093242],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003780709,0.00002194693,0.0001616478,0.000027953,0.00005026405,6.347565e-7,0.0003912121,0.0001545228,0.9931505,0.00008486909,0.005479916,0.00009846913],"study_design_scores_gemma":[0.0006024685,0.0007110009,0.0003787477,0.00006279545,0.0001022652,0.0007601299,0.001139954,0.00004730214,0.9700958,0.00002336302,0.02601825,0.00005796927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9911814,0.003382321,0.003877969,0.001000711,0.0003652159,0.0001120248,0.00004416557,9.947011e-7,0.00003522666],"genre_scores_gemma":[0.9993633,0.00009511441,0.000139732,0.00009060516,0.0001791796,0.00000211119,0.00001384047,0.000004149496,0.0001119786],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02305474,"threshold_uncertainty_score":0.129619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02194797620522401,"score_gpt":0.2609966051211728,"score_spread":0.2390486289159488,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}