{"id":"W116925092","doi":"10.4049/jimmunol.186.supp.100.11","title":"High-throughput characterization of MHC I-associated peptides presented by B lymphoblastoid cells (100.11)","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Major histocompatibility complex; Biology; Gene; MHC class I; HLA-B; Repertoire; Human leukocyte antigen; B cell; Proteomics; Molecular biology; Lymphoblast; Genetics; Antigen; Computational biology; Cell culture; Antibody","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001188118,0.0002799359,0.0001861042,0.0003440706,0.0001297691,0.0003291128,0.0001358783,0.0001757836,0.0007167889],"category_scores_gemma":[0.0001421091,0.00007457627,0.0001520158,0.0003666963,0.0001010542,0.0001011029,0.0001280404,0.0002773048,0.0005346467],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001269394,"about_ca_system_score_gemma":0.00009289118,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006143858,"about_ca_topic_score_gemma":0.000565081,"domain_scores_codex":[0.999912,0.000009594197,0.000005904216,0.00002447166,0.00003201883,0.00001584893],"domain_scores_gemma":[0.9999325,0.00002399359,0.00001359504,0.000007223301,0.00001071172,0.00001196789],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002204767,0.00000353108,0.0002966234,0.000009327872,0.000001667357,0.00001423431,0.000005790786,0.00001562365,0.9991981,0.000006819031,0.00001251842,0.0004137066],"study_design_scores_gemma":[0.00001552388,0.000185997,0.0395686,0.000008507669,0.00002583592,0.0004148846,0.00006597245,0.001607098,0.9555079,0.00007269001,0.002520456,0.000006596109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9878576,0.0006218253,0.007915666,0.00004740867,0.0000090791,0.00003538434,0.002734725,0.0001207904,0.0006576129],"genre_scores_gemma":[0.9684691,0.0008245177,0.01920507,0.00007651384,0.00001157708,0.0001107058,0.008762246,0.00007436996,0.002465936],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007167889,"threshold_uncertainty_score":0.002397835,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01086652218262901,"score_gpt":0.19772313957309,"score_spread":0.1868566173904609,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}