{"id":"W117770004","doi":"10.3920/978-90-8686-760-8_80","title":"The assembly of the mink blood transcriptoms generated by the next generation sequencing using the dog genome","year":2012,"lang":"en","type":"book-chapter","venue":"Wageningen Academic Publishers eBooks","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; Nova Scotia Department of Agriculture","funders":"","keywords":"Mink; Biology; Computational biology; Genome; Sequence assembly; DNA sequencing; Genetics; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001307133,0.0006159267,0.0003886787,0.00004413574,0.001287278,0.0003271792,0.001920437,0.0009387846,0.00001331683],"category_scores_gemma":[0.00007207494,0.0003115968,0.0004487846,0.00005723191,0.0007463154,0.00001060789,0.0004938615,0.001148035,0.00000206211],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008971966,"about_ca_system_score_gemma":0.0004093989,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007503705,"about_ca_topic_score_gemma":0.00004774838,"domain_scores_codex":[0.9971474,0.0002396059,0.0008171637,0.000608949,0.0005111926,0.0006757057],"domain_scores_gemma":[0.9976191,0.0000721188,0.0007900361,0.00115147,0.0002565077,0.0001107561],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001377153,0.000003578234,0.00002603213,0.00001292157,0.0008355625,4.447066e-7,0.0007307145,0.00007345864,0.9885197,0.0006587838,0.006290949,0.002834032],"study_design_scores_gemma":[0.000479465,0.00008743363,0.00005807507,0.00004090866,0.001231776,0.00007877663,0.0003569353,0.0003142163,0.2714192,0.0003828215,0.724833,0.0007174498],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7772523,0.1610328,0.0002852029,0.001161203,0.002290545,0.002126908,0.0002636003,0.00002132933,0.05556612],"genre_scores_gemma":[0.8499857,0.002153131,0.0001692608,0.001528286,0.003282498,0.0001061382,0.0001511758,0.0002307977,0.142393],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.718542,"threshold_uncertainty_score":0.9999336,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0649822374111002,"score_gpt":0.2464786789673721,"score_spread":0.1814964415562719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}