{"id":"W130693167","doi":"10.1007/978-1-61779-046-1_16","title":"Argonaute Pull-Down and RISC Analysis Using 2’-O-Methylated Oligonucleotides Affinity Matrices","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research","keywords":"Argonaute; Oligonucleotide; Biology; RNA; RNA-induced silencing complex; Caenorhabditis elegans; Computational biology; RNA interference; Cell biology; Genetics; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001652654,0.0002382688,0.0004238378,0.0004553621,0.00008692497,0.00002290933,0.0003056698,0.0003267745,0.00005842223],"category_scores_gemma":[0.0005584267,0.0002157577,0.0001729628,0.0007692185,0.0002383994,0.000005889546,0.0003244363,0.0002303015,0.000003286548],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001806399,"about_ca_system_score_gemma":0.00004971249,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000633654,"about_ca_topic_score_gemma":0.00009393762,"domain_scores_codex":[0.9970288,0.001353566,0.0003687403,0.0006433284,0.00008097327,0.0005246461],"domain_scores_gemma":[0.9991088,0.00006658156,0.0001274028,0.0004650617,0.0000858502,0.0001463346],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008887625,0.00004709859,0.02841157,0.00001186657,0.0003918555,0.00002822139,0.00004887965,0.00009072428,0.9650571,0.0002539753,0.000004573249,0.00556522],"study_design_scores_gemma":[0.0005589747,0.0003171762,0.01411665,0.000009409039,0.0002212556,0.00002740676,0.00009957476,0.003836717,0.9777054,0.002136454,0.0005644312,0.0004065553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.6619469,0.001842852,0.3354613,0.00001363579,0.00004130381,0.0001219768,0.000008195944,0.00001125014,0.0005526344],"genre_scores_gemma":[0.3684788,0.000391378,0.6308085,0.0001279753,0.00002829733,0.00001393499,0.00003647404,0.00002305559,0.00009159744],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.2953472,"threshold_uncertainty_score":0.8798345,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0395063375754028,"score_gpt":0.3898470182223626,"score_spread":0.3503406806469598,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}