{"id":"W1411734538","doi":"10.1128/microbiolspec.mdna3-0008-2014","title":"Biology of Three ICE Families: SXT/R391, ICE <i>Bs1</i> , and ICE <i>St1</i> /ICE <i>St3</i>","year":2014,"lang":"en","type":"review","venue":"Microbiology Spectrum","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Canada Research Chairs","keywords":"Biology; Adaptation (eye); Genome; Mobile genetic elements; Genetics; Extrachromosomal DNA; Evolutionary biology; Computational biology; Bacillus subtilis; Horizontal gene transfer; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.0007456084,0.001357048,0.00345534,0.0002508077,0.0001947375,0.00004560981,0.001508106,0.002478852,0.00007782962],"category_scores_gemma":[0.000205124,0.00118412,0.0007727534,0.0003730835,0.001690881,0.00001124404,0.0009950777,0.0007885205,0.000148116],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007692848,"about_ca_system_score_gemma":0.0004049242,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001697782,"about_ca_topic_score_gemma":0.0006598582,"domain_scores_codex":[0.9942065,0.0006769382,0.001676213,0.002084054,0.00009518885,0.001261109],"domain_scores_gemma":[0.9960169,0.0003125969,0.00144569,0.001879046,0.0001418243,0.0002039323],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004616698,0.0004753055,0.001946136,0.02196558,0.003122244,0.00004616465,0.0000887124,0.000001271066,0.8258609,0.002150696,0.02765431,0.116227],"study_design_scores_gemma":[0.0006574882,0.0005979248,0.00003926639,0.001381541,0.0007048265,0.0005403624,0.00002726145,6.239452e-7,0.01069068,0.0001168474,0.9841083,0.001134882],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.009191507,0.9833265,0.0007188727,0.0001516558,0.00127066,0.001082262,0.001145021,0.00006722553,0.003046288],"genre_scores_gemma":[0.002126786,0.9915017,0.001014249,0.0006985396,0.0009071139,0.00004387373,0.002474176,0.000201542,0.001031977],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.956454,"threshold_uncertainty_score":0.999918,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01198603931161524,"score_gpt":0.2628787896718457,"score_spread":0.2508927503602305,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}