{"id":"W1479975926","doi":"10.1111/j.1365-2958.2011.07963.x","title":"The GtaR protein negatively regulates transcription of the <i>gtaRI</i> operon and modulates gene transfer agent (RcGTA) expression in <i>Rhodobacter capsulatus</i>","year":2011,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Rhodobacter; Biology; Operon; Mutant; Gene; Transcription (linguistics); Promoter; Mutagenesis; Transcription factor; Regulation of gene expression; Directed mutagenesis; Molecular biology; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002210682,0.0002452623,0.0002346872,0.00004216624,0.0001106367,0.00001328379,0.0003946206,0.0004718177,0.000008187959],"category_scores_gemma":[0.00002025837,0.0001529988,0.0001195381,0.0001130963,0.000530806,0.000004626649,0.0001748706,0.0001878329,0.000001119777],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001272686,"about_ca_system_score_gemma":0.00003684849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007998137,"about_ca_topic_score_gemma":0.00014955,"domain_scores_codex":[0.9984818,0.0002779129,0.0003786321,0.0004581516,0.00004818048,0.0003553366],"domain_scores_gemma":[0.9993126,0.000006445841,0.00008531463,0.0004930035,0.00006298305,0.00003967547],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002123187,0.0000629042,0.000255567,0.00001387361,0.00003966461,0.000002463437,0.0001679498,0.00001023621,0.9983219,0.0001326864,0.00002217838,0.0007582548],"study_design_scores_gemma":[0.0006686266,0.0003007398,0.003685806,0.00003176132,0.00001994225,0.00003262129,0.00003385335,0.000007525589,0.9886996,0.0002720622,0.00605803,0.0001894503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963331,0.002082869,0.0003837081,0.0003060084,0.000166231,0.000623068,0.00004354316,0.000008366517,0.00005308588],"genre_scores_gemma":[0.9983774,0.000349919,0.0008520136,0.0001912039,0.00002416924,0.00004416839,0.00004969394,0.00002766294,0.00008370455],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009622322,"threshold_uncertainty_score":0.6239111,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008076292720467407,"score_gpt":0.1783433690467265,"score_spread":0.170267076326259,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}