{"id":"W148175565","doi":"10.1007/978-1-59745-261-8_3","title":"Genome-Wide Analysis of Membrane Transport Using Yeast Knockout Arrays","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Golgi apparatus; Endosome; Rab; Cell biology; Transport protein; Biology; Mutant; Saccharomyces cerevisiae; Vacuole; Secretory pathway; Secretion; Retromer; Vesicular transport protein; Yeast; Vacuolar protein sorting; Gene; Biochemistry; GTPase; Membrane; Vesicle; Cytoplasm","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005589129,0.000537017,0.0007282642,0.001282352,0.0003404595,0.0007284852,0.0004302301,0.0005296751,0.001065784],"category_scores_gemma":[0.0004498715,0.0003657439,0.0006277562,0.001223384,0.0002475534,0.0001496421,0.0003655595,0.0008139465,0.000506803],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004185424,"about_ca_system_score_gemma":0.0002595207,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00124059,"about_ca_topic_score_gemma":0.002057399,"domain_scores_codex":[0.999487,0.00006105459,0.00005756882,0.000186728,0.0001569061,0.00005070005],"domain_scores_gemma":[0.9995222,0.0001705519,0.0001229411,0.00006932129,0.00006844588,0.00004658833],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001353317,0.00003234485,0.00149186,0.00004844442,0.00006793588,0.00009339207,0.00002806193,0.0006728162,0.9942579,0.0002323854,0.0001409592,0.002798523],"study_design_scores_gemma":[0.000123764,0.0003867433,0.1047459,0.00002541788,0.0004324118,0.001018798,0.0001264146,0.01898628,0.857305,0.0008533492,0.01590473,0.00009123752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9200811,0.0008785902,0.05357823,0.0001631272,0.00004240689,0.0001620732,0.02175431,0.001065531,0.00227461],"genre_scores_gemma":[0.9020961,0.001658303,0.0568441,0.0002543742,0.00001901244,0.000436029,0.0346674,0.0005041595,0.00352045],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.001282352,"threshold_uncertainty_score":0.003565431,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02660541531619005,"score_gpt":0.326259708824585,"score_spread":0.299654293508395,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}