{"id":"W1487099071","doi":"10.1111/1462-2920.12395","title":"Functional analyses of three acyl‐ <scp>CoA</scp> synthetases involved in bile acid degradation in <scp> <i>P</i> </scp> <i>seudomonas putida</i>   <scp>DOC</scp> 21","year":2014,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Steroid Chemistry and Biochemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Ministerio de Ciencia e Innovación; Junta de Castilla y León; Ministerio de Economía y Competitividad; Michael Smith Health Research BC","keywords":"Biology; Steroid; Catabolism; Biochemistry; Bile acid; Mutant; Amino acid; Acyl-CoA; Metabolism; Enzyme; Gene; Hormone","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003750825,0.0006158365,0.0006418289,0.0001404394,0.0001035919,0.00002581221,0.0005624142,0.0008032884,0.00003033199],"category_scores_gemma":[0.0006184802,0.0006143856,0.0003032104,0.0002375627,0.0005939035,0.00002613002,0.0004745658,0.0004106375,0.00006185502],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001185499,"about_ca_system_score_gemma":0.00006497264,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004638042,"about_ca_topic_score_gemma":0.0001105643,"domain_scores_codex":[0.9968383,0.0002179996,0.0008493959,0.001149996,0.0001749284,0.0007693423],"domain_scores_gemma":[0.9981632,0.0004582023,0.0004517563,0.0007375896,0.00002472578,0.0001645209],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000189121,0.0005052038,0.07486907,0.00006275191,0.0001161563,0.000009011378,0.00004495455,0.0001806808,0.9197065,0.000003484696,0.004315957,0.0001673736],"study_design_scores_gemma":[0.001566459,0.0002649762,0.01714517,0.00004836742,0.0000641667,0.00009939612,0.0006784261,0.00003124165,0.962413,0.00006427943,0.01751751,0.0001070575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949434,0.00302642,0.0002726222,0.0000289737,0.0002299466,0.0002883447,0.000459394,0.00002480739,0.0007260396],"genre_scores_gemma":[0.9928167,0.0004105955,0.0003591716,0.000359889,0.0002807435,0.00007780753,0.004645707,0.00005747098,0.0009919506],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05772389,"threshold_uncertainty_score":0.9996307,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01350160372333114,"score_gpt":0.2170782896202531,"score_spread":0.203576685896922,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}