{"id":"W1488820662","doi":"10.1080/15548627.2015.1040972","title":"Molecular interactions of the<i>Saccharomyces cerevisiae</i>Atg1 complex provide insights into assembly and regulatory mechanisms","year":2015,"lang":"en","type":"article","venue":"Autophagy","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"Biology; Autophagy-related protein 13; Saccharomyces cerevisiae; CTD; Autophagy; Protein subunit; Cell biology; Scaffold protein; Phosphorylation; Biochemistry; Protein phosphorylation; Protein kinase A; Yeast; Gene; Signal transduction","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001208741,0.0001850793,0.0003398549,0.00009231899,0.00008333825,0.00001941146,0.0001670352,0.00007674234,0.0000648742],"category_scores_gemma":[0.00006991981,0.0001316453,0.0001275629,0.0002007534,0.0001383435,0.0001516508,0.0001119734,0.000158891,0.00001906821],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006187775,"about_ca_system_score_gemma":0.0002174494,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007256832,"about_ca_topic_score_gemma":0.000009858455,"domain_scores_codex":[0.9987881,0.00009940848,0.0003157296,0.000271894,0.0003506958,0.0001741399],"domain_scores_gemma":[0.99887,0.00004323894,0.000171409,0.0005425386,0.0001538777,0.0002188985],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002043566,0.0003997264,0.0004708362,0.0002212574,0.000380113,0.0001081236,0.002537491,0.00002130452,0.9246277,0.06051562,0.002161982,0.008351457],"study_design_scores_gemma":[0.002559728,0.0004033139,0.03718172,0.0002480773,0.0002842956,0.0001312844,0.0004954053,0.001292382,0.8990192,0.03846444,0.01964662,0.0002735376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928004,0.002798139,0.0006880009,0.0008284987,0.0002593593,0.0004654942,0.000003336478,0.0000768117,0.002079975],"genre_scores_gemma":[0.9970868,0.00004085009,0.001082101,0.001230275,0.0000662638,0.00002922506,0.0000103999,0.00002960622,0.0004245186],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03671089,"threshold_uncertainty_score":0.5368341,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02414233059207584,"score_gpt":0.2887093357316372,"score_spread":0.2645670051395613,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}