{"id":"W1489122856","doi":"10.1126/science.1103289","title":"Frequent Recombination in a Saltern Population of <i>Halorubrum</i>","year":2004,"lang":"en","type":"article","venue":"Science","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":158,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Haloarchaea; Genetics; Recombination; Archaea; Biology; Homologous recombination; Evolutionary biology; Locus (genetics); Population; Genetic diversity; DNA; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001929082,0.00003642462,0.00004428595,0.00004248086,0.00003053532,0.00000513846,0.0001049771,0.00001843128,6.644967e-7],"category_scores_gemma":[0.00003980829,0.00003496469,0.00001431745,0.0001427453,0.00007996409,0.000001010789,0.000047203,0.00001544279,0.000001070383],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002031374,"about_ca_system_score_gemma":0.00004788423,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001488904,"about_ca_topic_score_gemma":0.0001671842,"domain_scores_codex":[0.9995731,0.000005741487,0.00009723447,0.0001471179,0.00008179947,0.00009507149],"domain_scores_gemma":[0.9997943,0.000001528201,0.00003799736,0.0001081272,0.00004091578,0.00001711638],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000003572352,0.00002256988,0.0524336,0.000002666131,0.000001010183,1.549869e-7,0.0000680792,0.0005633123,0.9447721,0.0005649065,0.000001484365,0.001566573],"study_design_scores_gemma":[0.0002828643,0.0001085175,0.6356643,0.000008621098,0.000001144273,0.000001525848,0.00002772375,0.00001593993,0.3583022,0.005368772,0.0001609901,0.00005744357],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989521,0.0002401929,0.0001224718,0.00008371595,0.0001074831,0.0000598276,0.000001768188,7.139937e-7,0.0004317497],"genre_scores_gemma":[0.9991515,0.00006153643,0.0007117523,0.00003994201,0.0000144345,0.000003281918,0.000003257958,0.000002171509,0.00001209385],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5864699,"threshold_uncertainty_score":0.1425819,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008154060484285387,"score_gpt":0.2471292098782483,"score_spread":0.2389751493939629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}