{"id":"W1491700128","doi":"10.1002/9780470015902.a0020836.pub2","title":"Pseudogene Evolution in the Human Genome","year":2014,"lang":"en","type":"other","venue":"Encyclopedia of Life Sciences","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Pseudogene; Genome; Biology; Human genome; Genetics; Gene; Genome evolution; Retrotransposon; Gene duplication; Function (biology); Evolutionary biology; Computational biology; Transposable element","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000833768,0.0001481592,0.0001822584,0.0001229218,0.00006828627,0.000009767501,0.0007241489,0.0001976181,0.0002369915],"category_scores_gemma":[0.0001126594,0.0001006242,0.00006784149,0.0001560991,0.0002456948,0.000001762275,0.00006288995,0.00005866308,0.00002674027],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004438054,"about_ca_system_score_gemma":0.000114676,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000151846,"about_ca_topic_score_gemma":0.000184814,"domain_scores_codex":[0.998823,0.0001715031,0.0002120996,0.0003262492,0.0002745748,0.000192568],"domain_scores_gemma":[0.9994025,0.00001579428,0.0002098761,0.0003238322,0.0000125328,0.00003551425],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002209564,0.0002433473,0.007384028,0.0002390617,0.00008533619,0.000004524237,0.0003652366,0.00006571806,0.7668654,0.01049718,0.2109569,0.003271176],"study_design_scores_gemma":[0.0002177121,0.0003955892,0.00458156,0.00007591175,0.00001901093,0.000003852004,0.0002102779,0.000002488684,0.003226137,0.0009453623,0.9899409,0.000381173],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"other","genre_gemma":"empirical","genre_scores_codex":[0.03074299,0.006398672,0.0009221219,0.0001367028,0.0003143401,0.0003627305,0.00001890028,0.00001195803,0.9610916],"genre_scores_gemma":[0.7250766,0.004728776,0.002679533,0.0005624021,0.003502309,0.0001409054,0.00008041402,0.0002015181,0.2630276],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.778984,"threshold_uncertainty_score":0.4103334,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01301638466315187,"score_gpt":0.2538783332207022,"score_spread":0.2408619485575504,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}