{"id":"W1498956938","doi":"10.1016/j.tig.2015.05.002","title":"Metabolic regulation in model ascomycetes – adjusting similar genomes to different lifestyles","year":2015,"lang":"en","type":"review","venue":"Trends in Genetics","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"ca_institutions":"Concordia University","funders":"Canadian Institutes of Health Research; Faculty of Arts and Sciences; Concordia University; Consejo Nacional de Ciencia y Tecnología; Canada Research Chairs","keywords":"Biology; Genome; Candida albicans; Saccharomyces cerevisiae; Phenotype; Genetics; Computational biology; Model organism; Gene; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004480405,0.0005770002,0.001181679,0.0008170915,0.00003888647,0.00004982267,0.0006351504,0.0005496226,0.00001980843],"category_scores_gemma":[0.00008357672,0.000507355,0.0002577247,0.0006862115,0.00005690567,0.000002585376,0.000629345,0.0003681751,0.00001935899],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008768401,"about_ca_system_score_gemma":0.0002684464,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009101382,"about_ca_topic_score_gemma":0.0002687234,"domain_scores_codex":[0.9970168,0.0002936625,0.0007794967,0.000821799,0.0004259938,0.0006621734],"domain_scores_gemma":[0.9986691,0.00003216774,0.0001586178,0.0007704466,0.0001060015,0.0002636548],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001739215,0.00009981487,0.000392244,0.0007834947,0.00005468852,0.000005338193,0.00008156744,0.01779941,0.0009476175,0.00001971598,0.0005477975,0.9792509],"study_design_scores_gemma":[0.0005694742,0.0002623829,0.0007390901,0.001228028,0.0002018418,0.00001253461,0.00002057666,0.008160211,0.001292305,0.000130441,0.9863781,0.001004959],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00655266,0.991964,0.0001047333,0.0000310516,0.0001233187,0.0004105824,0.0001189885,0.00001171517,0.0006829617],"genre_scores_gemma":[0.003896977,0.9896839,0.002816129,0.00003219123,0.0003809321,0.0001679813,0.0007601077,0.0001119624,0.002149819],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9858304,"threshold_uncertainty_score":0.9997378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1075435388129761,"score_gpt":0.3938965640596381,"score_spread":0.2863530252466621,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}