{"id":"W1506491874","doi":"10.1016/j.stem.2015.05.001","title":"Bringing Blood Stem Cell Phenotype, Genotype, and Function Closer Together","year":2015,"lang":"en","type":"letter","venue":"Cell stem cell","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Stem cell; Phenotype; Hematopoietic stem cell; Haematopoiesis; Cell; Function (biology); Computational biology; Genotype; Cell biology; Genetics; Bioinformatics; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0002531284,0.0006807191,0.0005166701,0.0001048159,0.0001484667,0.0001295921,0.0003950586,0.001522524,0.0000666792],"category_scores_gemma":[0.000001364131,0.0006858055,0.0002225443,0.0001111597,0.00009336475,0.000009123353,0.0001768914,0.0009271611,0.0001344798],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003946133,"about_ca_system_score_gemma":0.0001645239,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007864161,"about_ca_topic_score_gemma":0.00002099582,"domain_scores_codex":[0.9972334,0.0001574019,0.0004703205,0.001086281,0.0003559122,0.0006967052],"domain_scores_gemma":[0.9985355,0.00002815368,0.0002827542,0.0007811743,0.000187275,0.0001851083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001476166,0.0001842819,0.0005379774,0.001084808,0.0001265817,0.00008439984,0.0001998494,0.00004117779,0.5537766,0.000001361455,0.4414981,0.00231735],"study_design_scores_gemma":[0.001201453,0.0003727177,0.0000168389,0.00003399827,0.0003395664,0.00001006513,0.00006217035,0.00003400016,0.2530095,0.00001346871,0.7441778,0.0007284564],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8145689,0.04698979,0.002162471,0.002967441,0.004689564,0.001521167,0.000239323,0.0002037175,0.1266576],"genre_scores_gemma":[0.5833824,0.001917093,0.0006986232,0.1025008,0.0116334,0.00008181203,0.00203058,0.0008478229,0.2969075],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3026797,"threshold_uncertainty_score":0.9997737,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01422733191758196,"score_gpt":0.1902923565555983,"score_spread":0.1760650246380163,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}