{"id":"W1510686606","doi":"10.1159/000359977","title":"Metagenomics and Innate Immunity - A Unique Partnership or a Battlefield?","year":2014,"lang":"en","type":"editorial","venue":"Journal of Innate Immunity","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Metagenomics; Biology; Innate immune system; Genome; Computational biology; Genomics; Microbiome; Human microbiome; Comparative genomics; Genetics; Gene; Immune system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.003560169,0.0004535501,0.0008830268,0.0002178357,0.0002589815,0.0001141613,0.0008113097,0.001447387,0.00004070346],"category_scores_gemma":[0.002249227,0.0003582331,0.0002741175,0.0001366847,0.0002130845,0.00001414724,0.0004466291,0.002739188,0.000004523644],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000852913,"about_ca_system_score_gemma":0.001463078,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002986772,"about_ca_topic_score_gemma":0.0002969297,"domain_scores_codex":[0.9968404,0.001149413,0.001010415,0.0002643795,0.0002926263,0.0004427447],"domain_scores_gemma":[0.9966403,0.0003727442,0.001323633,0.0007095881,0.0007121878,0.0002415267],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00159713,0.000179007,0.00007207628,0.0004367774,0.0005594107,0.00003471959,0.0003319323,0.000004841005,0.1293027,0.00002322609,0.8660589,0.001399364],"study_design_scores_gemma":[0.001422937,0.001525137,0.0003843869,0.0002342738,0.0001866264,0.0001616868,0.0001445497,0.000003348172,0.009323128,0.0001180541,0.9860675,0.0004283867],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"editorial","genre_scores_codex":[0.5962725,0.00813205,0.0004757436,0.0006266782,0.3924646,0.0005222587,0.0002452976,0.00002329301,0.001237637],"genre_scores_gemma":[0.355543,0.04410277,0.00227575,0.001438557,0.5900798,0.00001724056,0.001107799,0.000293441,0.005141697],"genre_candidate":"editorial","genre_consensus":null,"teacher_disagreement_score":0.2407295,"threshold_uncertainty_score":0.999887,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01792657591565329,"score_gpt":0.3017085406955405,"score_spread":0.2837819647798872,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}