{"id":"W1515133252","doi":"10.1111/mmi.12986","title":"<scp><i>A</i></scp><i>cinetobacter</i> strains carry two functional oligosaccharyltransferases, one devoted exclusively to type <scp>IV</scp> pilin, and the other one dedicated to <scp><i>O</i></scp>‐glycosylation of multiple proteins","year":2015,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":102,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Pilin; Biology; Glycosylation; Pilus; Glycan; Gene; Virulence; Biochemistry; Computational biology; Microbiology; Genetics; Glycoprotein","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007681666,0.0006455276,0.0008092225,0.000222259,0.0001753945,0.00006445409,0.0006377089,0.0005936057,0.00001045777],"category_scores_gemma":[0.003017607,0.0005820293,0.0002021336,0.0005854664,0.0006041509,0.00002220655,0.0003976753,0.0003724701,0.00006982275],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008367216,"about_ca_system_score_gemma":0.0004145265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003933223,"about_ca_topic_score_gemma":0.0005835237,"domain_scores_codex":[0.9961234,0.0005979734,0.000875693,0.001182958,0.0002890153,0.0009309988],"domain_scores_gemma":[0.9970995,0.0003269749,0.0003610586,0.0009215642,0.0008280388,0.0004629056],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002235451,0.0002796481,0.003209467,0.00006451493,0.0004523443,0.00001300911,0.0005857394,0.0003743011,0.9882976,0.0001930501,0.006157678,0.0001490859],"study_design_scores_gemma":[0.00529783,0.001147149,0.009085927,0.0001046915,0.0001973422,0.0001016057,0.0003713274,0.0000510561,0.9006224,0.000112585,0.08273849,0.0001695678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9683111,0.001619021,0.02593695,0.0003825483,0.0003654211,0.002164026,0.0006356607,0.00006588674,0.0005194359],"genre_scores_gemma":[0.9893192,0.0001034038,0.004932028,0.002795135,0.0003363555,0.00009709915,0.001523097,0.0001398332,0.0007538271],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08767518,"threshold_uncertainty_score":0.9996631,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01748015514736497,"score_gpt":0.2322879312761923,"score_spread":0.2148077761288273,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}