{"id":"W1518921386","doi":"10.1002/0471250953.bi1009s37","title":"The Bluejay Genome Browser","year":2012,"lang":"en","type":"article","venue":"Current Protocols in Bioinformatics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Genome Alberta; Genome Canada","keywords":"Genome browser; Genome; Computational biology; Biology; Computer science; World Wide Web; Genetics; Genomics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004306494,0.0001499187,0.0001111456,0.00002698417,0.0001542508,0.00004533154,0.0002967354,0.00006672258,0.000004361345],"category_scores_gemma":[0.00006434137,0.0001025049,0.0000623489,0.00008583361,0.00009534141,0.000003200232,0.0002344852,0.0001087598,0.00003963537],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001838268,"about_ca_system_score_gemma":0.00004108773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":8.184857e-7,"about_ca_topic_score_gemma":0.000005532234,"domain_scores_codex":[0.9989596,0.00002922967,0.000365746,0.00009353489,0.0001205304,0.0004313715],"domain_scores_gemma":[0.9993704,0.00001721942,0.0001140391,0.0003754067,0.00004599311,0.00007693253],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004926109,0.001447771,0.4481024,0.001357239,0.0003618004,9.808492e-7,0.007776168,0.0004853842,0.1083237,0.0107737,0.02127845,0.3995998],"study_design_scores_gemma":[0.0004584011,0.00009179245,0.02800058,0.00002431253,0.000004877058,0.000004298057,0.0001700833,0.0001160831,0.0042283,0.0001215235,0.9665698,0.0002099452],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8419411,0.01816126,0.003613132,0.0003963281,0.002500057,0.1115531,0.0001157433,0.00003520722,0.02168414],"genre_scores_gemma":[0.9201955,0.001752967,0.005220553,0.0003267104,0.001432276,0.07048111,0.00008075939,0.00005934871,0.0004508266],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9452913,"threshold_uncertainty_score":0.4180029,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03276754577956335,"score_gpt":0.3188276550412746,"score_spread":0.2860601092617112,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}