{"id":"W1519779150","doi":"10.1371/journal.pone.0131978","title":"Chicken Caecal Microbiome Modifications Induced by Campylobacter jejuni Colonization and by a Non-Antibiotic Feed Additive","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Animal Nutrition and Physiology","field":"Agricultural and Biological Sciences","cited_by":122,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; National Research Council Canada; Cegep de Saint Hyacinthe; Natural Sciences and Engineering Research Council of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation","keywords":"Campylobacter jejuni; Colonization; Biology; Microbiome; Clostridia; Microbiology; Campylobacter; Campylobacteriosis; Feces; Caecum; Bacteria; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001492848,0.0004434437,0.0004924416,0.0001991442,0.000170116,0.000456725,0.0001963011,0.0003935221,0.0008437125],"category_scores_gemma":[0.0002967683,0.0002011687,0.00028477,0.0001395498,0.0004037447,0.0002496992,0.0003237231,0.0005587256,0.0001550269],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003840835,"about_ca_system_score_gemma":0.0002913384,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001412724,"about_ca_topic_score_gemma":0.002800675,"domain_scores_codex":[0.9997157,0.00004790512,0.00001770449,0.00008473769,0.00006717497,0.00006663645],"domain_scores_gemma":[0.9997365,0.00005064939,0.00007096937,0.00001758492,0.00003972544,0.00008466272],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001295493,0.00009205822,0.0005730287,0.00005331744,0.000009401497,0.00003759573,0.00003293022,0.00002614684,0.9969469,0.000008995696,0.00002132532,0.0009028299],"study_design_scores_gemma":[0.00005641579,0.01070915,0.07312284,0.00003615117,0.00009399174,0.0002512434,0.0003516913,0.0008826462,0.9120913,0.00004115216,0.002335845,0.00002756711],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988019,0.0005152177,0.000187751,0.00004146242,0.00002286192,0.00001741718,0.0001134125,0.00001160774,0.0002883238],"genre_scores_gemma":[0.9964793,0.0003964406,0.001088978,0.0001203849,0.00001022082,0.00004877031,0.0002526389,0.00001196528,0.001591356],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001412724,"threshold_uncertainty_score":0.002822459,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04935965737825238,"score_gpt":0.2138651759930391,"score_spread":0.1645055186147867,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}