{"id":"W1525378684","doi":"10.1111/jbg.12167","title":"A genomewide association mapping study using ultrasound‐scanned information identifies potential genomic regions and candidate genes affecting carcass traits in Nellore cattle","year":2015,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; BIO (Canada)","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Candidate gene; Biology; Single-nucleotide polymorphism; SNP; Genetics; Gene; DPYD; Genome-wide association study; SNP array; Genome; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006322487,0.0001402685,0.000203311,0.0001439109,0.0001155121,0.0001173934,0.00009776608,0.0001160876,5.99882e-7],"category_scores_gemma":[0.0001174621,0.0001401854,0.00004219548,0.00009737256,0.00003945971,0.00002964536,0.00007350231,0.0001460573,2.798915e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006591923,"about_ca_system_score_gemma":0.0001161257,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000820063,"about_ca_topic_score_gemma":0.00008123217,"domain_scores_codex":[0.9989398,0.00008091288,0.0004269063,0.0001432017,0.0001943222,0.0002148335],"domain_scores_gemma":[0.9992051,0.00002198736,0.0003793506,0.0000645964,0.0002027207,0.0001262291],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002914314,0.00008792553,0.3939371,0.00005413314,0.000169102,0.00000507769,0.01242629,0.009696426,0.5804783,0.00001391555,0.0001413252,0.002699016],"study_design_scores_gemma":[0.001793652,0.001921802,0.9712543,0.00004988658,0.0001330819,0.0003959808,0.02052905,0.0003469146,0.002876529,0.0002380111,0.0002088878,0.0002518857],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953393,0.002301989,0.001894388,0.00004093259,0.0002275836,0.0001564989,0.00000896911,0.00000319005,0.00002711813],"genre_scores_gemma":[0.9949958,0.0002117622,0.004363442,0.00002701923,0.0003634498,0.000001212279,0.000005895038,0.00001192966,0.00001950352],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5776018,"threshold_uncertainty_score":0.5716594,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02343249097123114,"score_gpt":0.253512582713737,"score_spread":0.2300800917425059,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}