{"id":"W1526988544","doi":"10.1186/1471-2180-6-24","title":"The Subviral RNA Database: a toolbox for viroids, the hepatitis delta virus and satellite RNAs research","year":2006,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":78,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Agricultural Research Service; Université de Sherbrooke; U.S. Department of Agriculture","keywords":"Biology; Virology; Satellite; HEPATITIS DELTA; RNA; Parasitology; Delta; Virus; Hepatitis B virus; Computational biology; Database; Genetics; Gene; Computer science; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001440288,0.0001902817,0.0003138003,0.00007567683,0.0009406192,0.00005172888,0.0002434036,0.0001268511,0.000025422],"category_scores_gemma":[0.0006537155,0.0001060774,0.00008577613,0.0001820054,0.001186726,0.00004972577,0.0002377732,0.0003369428,0.00007804183],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008246879,"about_ca_system_score_gemma":0.0001375558,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01060918,"about_ca_topic_score_gemma":0.1134227,"domain_scores_codex":[0.9980953,0.000309193,0.0003710217,0.0004113327,0.0001031498,0.000710015],"domain_scores_gemma":[0.9970775,0.001999093,0.00007541553,0.0005726215,0.0002203184,0.0000551113],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0005241559,0.00008676276,0.114425,0.0001006406,0.0001059495,0.00002186811,0.0002462085,4.501704e-7,0.7577565,0.005964775,0.1123419,0.008425822],"study_design_scores_gemma":[0.00142889,0.0004939597,0.1007226,0.00005548333,0.00007565932,0.0002165389,0.0001229677,0.00004408946,0.0452672,0.001017252,0.850351,0.0002043243],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9624659,0.02841378,0.0005397464,0.003966181,0.0003569278,0.001785594,0.0009163209,0.0000594787,0.001496044],"genre_scores_gemma":[0.9788204,0.01071541,0.00214598,0.001069028,0.0008675248,0.0003729474,0.0005753188,0.00005868067,0.005374706],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7380091,"threshold_uncertainty_score":0.9959792,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05645103051192672,"score_gpt":0.3372728712863804,"score_spread":0.2808218407744537,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}