{"id":"W1530598392","doi":"10.1186/s13567-015-0192-1","title":"Calves shedding Mycobacterium avium subspecies paratuberculosis are common on infected dairy farms","year":2015,"lang":"en","type":"article","venue":"Veterinary Research","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Agriculture and Agri-Food Canada","keywords":"Mycobacterium avium subspecies paratuberculosis; Paratuberculosis; Feces; Herd; Biology; Veterinary medicine; Indicator bacteria; Animal science; Stock (firearms); Microbiology; Mycobacterium; Fecal coliform; Bacteria; Ecology; Geography; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004252096,0.0003349201,0.000479331,0.0007905866,0.0004938007,0.0006134751,0.0003873157,0.0003376587,0.00174916],"category_scores_gemma":[0.001329634,0.0002410438,0.0002245292,0.0008261454,0.000305832,0.0003698376,0.0004519549,0.0002718276,0.0002640719],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003211419,"about_ca_system_score_gemma":0.0003187882,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005858714,"about_ca_topic_score_gemma":0.01206599,"domain_scores_codex":[0.9993493,0.0000946208,0.00005138712,0.00009806771,0.0002545391,0.0001521165],"domain_scores_gemma":[0.9990174,0.0001768447,0.0004050162,0.00003379385,0.0001208177,0.0002462364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008849493,0.00006351781,0.988035,0.00004244726,0.00003810729,0.0004903733,0.0002132241,0.00003233044,0.004726378,0.00001038596,0.0001192476,0.006140544],"study_design_scores_gemma":[0.000002224504,0.0001821484,0.9981578,0.00001101545,0.00001333516,0.0006363497,0.0004219711,0.00005392174,0.0003527408,0.00001283917,0.000152993,0.000002673999],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992996,0.0002117469,0.0000991277,0.00001388146,0.00000245626,0.000007187556,0.0001359787,0.000005859932,0.0002239667],"genre_scores_gemma":[0.9991019,0.0002503634,0.0001322709,0.00002895564,0.00000513114,0.000004640247,0.0002585311,0.000001282515,0.0002169605],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005858714,"threshold_uncertainty_score":0.01164925,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2478786415704499,"score_gpt":0.4369664761344662,"score_spread":0.1890878345640163,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}