{"id":"W1541890580","doi":"10.1111/j.1365-2958.2005.04889.x","title":"Nuclear magnetic resonance solution structure of the periplasmic signalling domain of the TonB‐dependent outer membrane transporter FecA from <i>Escherichia coli</i>","year":2005,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Periplasmic space; Bacterial outer membrane; Biology; Inner membrane; Transmembrane domain; Transmembrane protein; Biophysics; Sigma factor; Protein structure; Membrane transport protein; Biochemistry; Membrane protein; Cell biology; Crystallography; Escherichia coli; Receptor; Membrane; Chemistry; Gene; RNA polymerase","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008952975,0.0002265417,0.0002725383,0.00002437278,0.00007837153,0.000008300803,0.0006752967,0.0005581609,0.0001014217],"category_scores_gemma":[0.00001574953,0.0001535496,0.0002193986,0.0001082536,0.0004243356,0.000002433037,0.0002267814,0.0002294279,0.000002271004],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001808864,"about_ca_system_score_gemma":0.00006723694,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004424806,"about_ca_topic_score_gemma":0.000220963,"domain_scores_codex":[0.9986342,0.0001736092,0.000395703,0.0004135421,0.00009039829,0.0002925115],"domain_scores_gemma":[0.9990398,0.000005606094,0.0002095295,0.0006228701,0.00009199021,0.00003016847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001290418,0.0000486571,0.0001987251,0.00001180027,0.00004615896,0.000001277648,0.0001014075,0.00009370122,0.9985563,0.00007030321,0.0001375627,0.000605042],"study_design_scores_gemma":[0.0006503689,0.0001716993,0.001080905,0.00002221027,0.00004934613,0.00001860902,0.00002016972,0.00002086596,0.9481258,0.00006871763,0.04960506,0.000166252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955245,0.001976988,0.0001944087,0.001266906,0.0003123618,0.0003018087,0.0003719296,0.000007351083,0.00004372514],"genre_scores_gemma":[0.9968199,0.00009410734,0.001715988,0.001073192,0.00008224879,0.000003642753,0.00008279523,0.00003089139,0.00009719939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05043053,"threshold_uncertainty_score":0.6261571,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002580918051797477,"score_gpt":0.1662002857637551,"score_spread":0.1636193677119577,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}