{"id":"W1543878856","doi":"10.1111/zph.12012","title":"Spatio‐Temporal Scan Statistics for the Detection of Outbreaks Involving Common Molecular Subtypes: Using Human Cases of <i>Escherichia coli</i> O157:H7 Provincial PFGE Pattern 8 (National Designation ECXAI.0001) in Alberta as an Example","year":2012,"lang":"en","type":"article","venue":"Zoonoses and Public Health","topic":"Data-Driven Disease Surveillance","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Provincial Laboratory of Public Health; Alberta Health; University of Calgary; University of Guelph","funders":"","keywords":"Pulsed-field gel electrophoresis; Outbreak; Biology; Virology; Genetics; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002963384,0.0002398567,0.0003114333,0.003161119,0.0002813095,0.0005912813,0.0006087042,0.0005004163,0.0007101328],"category_scores_gemma":[0.01396952,0.0001709877,0.0004820458,0.002906004,0.0007088775,0.000509002,0.0004366498,0.000370242,0.00009123307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00112876,"about_ca_system_score_gemma":0.001749809,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.07890081,"about_ca_topic_score_gemma":0.08009661,"domain_scores_codex":[0.9989188,0.0004075337,0.00007588061,0.0002169926,0.0002994666,0.0000813743],"domain_scores_gemma":[0.9885955,0.007943853,0.001977021,0.0004626757,0.0006917174,0.0003291765],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006925556,0.00004783006,0.9408302,0.0000650704,0.0002309693,0.000320456,0.0002635324,0.02650333,0.003619165,0.00112872,0.0005513668,0.0257468],"study_design_scores_gemma":[0.00004304002,0.0003964664,0.7322446,0.00002888485,0.0001233591,0.0006998846,0.0008752897,0.2607575,0.001495389,0.001947325,0.001342823,0.00004559388],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9763821,0.0003903133,0.02079882,0.0001827637,0.00001370157,0.00005084496,0.001240513,0.0001633735,0.0007776838],"genre_scores_gemma":[0.9901171,0.00008457588,0.008715738,0.00001778873,0.000010912,0.00003588997,0.0008471956,0.00001056866,0.0001603363],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9210992,"threshold_uncertainty_score":0.1568831,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07653537945280169,"score_gpt":0.3380146549039405,"score_spread":0.2614792754511388,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}