{"id":"W1547745665","doi":"10.1111/1751-7915.12161","title":"Some (bacilli) like it hot: genomics of <scp> <i>G</i> </scp> <i>eobacillus</i> species","year":2014,"lang":"en","type":"article","venue":"Microbial Biotechnology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Northwestern University","keywords":"Geobacillus stearothermophilus; Thermophile; Biology; Bacillus (shape); Bacilli; Spore; Bacteria; Bacillaceae; Comparative genomics; Microbiology; Strain (injury); Genomics; Bacillus subtilis; Genome; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000209195,0.0003294703,0.0004467039,0.0001272013,0.0001254292,0.00001846399,0.0006133165,0.0006922951,0.000005900923],"category_scores_gemma":[0.0001669248,0.000334745,0.0002003904,0.0001579644,0.0006357668,0.000001549911,0.0005983806,0.0001966875,0.00004777798],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002473953,"about_ca_system_score_gemma":0.00006448545,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000293274,"about_ca_topic_score_gemma":0.00007754006,"domain_scores_codex":[0.9982812,0.00005213378,0.000438618,0.0006019807,0.00009002605,0.0005359994],"domain_scores_gemma":[0.9988018,0.00004262259,0.0002220599,0.0007615819,0.0001014495,0.00007050109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001709026,0.00006088635,0.0001823726,0.00002520777,0.0001066427,0.000001223345,0.00009017857,0.00003786171,0.9704231,0.001315442,0.02693042,0.0008095625],"study_design_scores_gemma":[0.0003350681,0.0002441349,0.0001565575,0.000004617553,0.00001952464,0.00001721179,0.0001067776,0.000003947576,0.5135853,0.0002116437,0.4852269,0.00008830301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927208,0.003219755,0.0007605392,0.0008662679,0.0006684384,0.0002329837,0.0001864259,0.00002615135,0.001318606],"genre_scores_gemma":[0.9875162,0.005719334,0.002437027,0.001822196,0.0006124421,0.0000140029,0.00008681684,0.00005583257,0.001736122],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4582965,"threshold_uncertainty_score":0.9999105,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007368339412184074,"score_gpt":0.1895253918192301,"score_spread":0.182157052407046,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}