{"id":"W1551715599","doi":"10.1111/1751-7915.12253","title":"Absence of lysogeny in wild populations of <scp> <i>E</i> </scp> <i>rwinia amylovora</i> and <scp> <i>P</i> </scp> <i>antoea agglomerans</i>","year":2015,"lang":"en","type":"article","venue":"Microbial Biotechnology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Brock University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Lysogenic cycle; Erwinia; Pantoea agglomerans; Lysogen; Biology; Microbiology; Prophage; Fire blight; Bacteriophage; Pantoea; Podoviridae; Myoviridae; Temperateness; Bacteria; Genetics; Escherichia coli; Pseudomonas","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003075433,0.0003548471,0.0006063284,0.0002774155,0.00009540076,0.0000276,0.0005795697,0.0005962391,0.00004087427],"category_scores_gemma":[0.0002844319,0.00037078,0.0001307,0.001066973,0.001094369,0.000326625,0.0005429732,0.000508775,0.0001322361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001299934,"about_ca_system_score_gemma":0.00004891628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002479808,"about_ca_topic_score_gemma":0.002276754,"domain_scores_codex":[0.9976262,0.00008881796,0.000828823,0.0006460944,0.0001885988,0.0006214082],"domain_scores_gemma":[0.9985759,0.0001665358,0.0004331806,0.0006141238,0.00004685692,0.0001634472],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000007171667,0.0002383628,0.006643519,0.00002601445,0.00001792308,0.00001089991,0.0007964442,0.0001108083,0.974956,0.0001513771,0.01577536,0.001266076],"study_design_scores_gemma":[0.001283415,0.0002741072,0.01062589,0.0001105459,0.0000436906,0.0002638492,0.000831762,0.00003911693,0.8478796,0.0004886682,0.1380334,0.0001259739],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995188,0.0003825965,0.0002930326,0.0005062365,0.0003847605,0.0004232796,0.0002446398,0.00009850671,0.002478926],"genre_scores_gemma":[0.9945039,0.0002981992,0.003868923,0.0004174174,0.00003685014,0.00001519228,0.00004500563,0.0000410441,0.0007734312],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1270764,"threshold_uncertainty_score":0.9998744,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01494144315429305,"score_gpt":0.231844486831303,"score_spread":0.21690304367701,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}