{"id":"W1554479079","doi":"10.1111/j.1529-8817.2005.00079.x","title":"PHYLOGENETIC IMPLICATIONS OF THE CAD COMPLEX FROM THE PRIMITIVE RED ALGA <i>CYANIDIOSCHYZON MEROLAE</i> (CYANIDIALES, RHODOPHYTA)<sup>1</sup>","year":2005,"lang":"en","type":"article","venue":"Journal of Phycology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saint Paul University","funders":"","keywords":"Biology; Aspartate carbamoyltransferase; Monophyly; Dihydroorotate dehydrogenase; Phylogenetic tree; Pyrimidine metabolism; Phylogenetics; Botany; Genetics; Gene; Biochemistry; Enzyme; Pyrimidine; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002911012,0.0001629042,0.0002917303,0.00003237609,0.0002027312,0.00001251819,0.0008774077,0.0001963897,0.0001745335],"category_scores_gemma":[0.0001313746,0.0001096499,0.0002831859,0.0001176611,0.0003192414,0.000007399786,0.000237031,0.0002756686,0.000008861512],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003719885,"about_ca_system_score_gemma":0.0002029463,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004253726,"about_ca_topic_score_gemma":0.00009363781,"domain_scores_codex":[0.9985815,0.0003683379,0.0004396446,0.0002045026,0.0001681866,0.0002377928],"domain_scores_gemma":[0.9984888,0.0001249806,0.0005624239,0.0004567541,0.0002874089,0.00007964682],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002259567,0.000182029,0.03794549,0.000006167861,0.0003215511,0.000002111119,0.0002665379,0.0008738626,0.9318452,0.0003362271,0.0242596,0.003735276],"study_design_scores_gemma":[0.001404944,0.000614741,0.6998986,0.00001724145,0.0002321682,0.0001371061,0.0001781255,0.00004395531,0.1813897,0.001058967,0.1148332,0.0001913119],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897987,0.001579609,0.0004772872,0.00580491,0.0001728163,0.0003174291,0.0002603303,0.000003434843,0.001585522],"genre_scores_gemma":[0.9956141,0.0002716332,0.001057048,0.002084894,0.0008578061,0.000006305084,0.00002751792,0.00001427741,0.00006645257],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7504555,"threshold_uncertainty_score":0.4471392,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02026986055254955,"score_gpt":0.2433280580476158,"score_spread":0.2230581974950663,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}