{"id":"W1555082803","doi":"10.1186/1742-4690-3-15","title":"HTLV-I antisense transcripts initiating in the 3'LTR are alternatively spliced and polyadenylated","year":2006,"lang":"en","type":"article","venue":"Retrovirology","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":167,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Montréal; Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Centre National de la Recherche Scientifique; Cancer Research Society; Association pour la Recherche sur le Cancer","keywords":"Polyadenylation; Transcription (linguistics); Retrovirus; Exon; Biology; Gene isoform; RNA splicing; Messenger RNA; Long terminal repeat; Antisense RNA; RNA; Alternative splicing; Genetics; Gene; Molecular biology; Virology; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001135027,0.0003303911,0.0001244455,0.0001416717,0.0001260334,0.0002845274,0.0001189413,0.0001710583,0.001620527],"category_scores_gemma":[0.0001587066,0.00009332366,0.0001728123,0.0001339167,0.0002424059,0.0001119345,0.0001021945,0.0003764369,0.0006733974],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002130136,"about_ca_system_score_gemma":0.0001505536,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001995369,"about_ca_topic_score_gemma":0.0002811082,"domain_scores_codex":[0.9999094,0.000009441329,0.000006395401,0.00002690059,0.00003124502,0.00001659064],"domain_scores_gemma":[0.9997324,0.00005914355,0.0001164828,0.00002235654,0.00004042115,0.00002922066],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000270098,0.000004701178,0.0004742365,0.00001953821,0.000001854294,0.00004144811,0.00001369093,0.000009613295,0.9984953,0.0001221475,0.00001551307,0.0007747752],"study_design_scores_gemma":[0.00001269649,0.0003831024,0.01136682,0.00001434993,0.00002760542,0.0008844446,0.00004539358,0.000320102,0.9817197,0.0001885558,0.005033071,0.000004263964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9854682,0.001558444,0.01014619,0.00005900131,0.00005026054,0.00004062649,0.0005618561,0.000124124,0.001991288],"genre_scores_gemma":[0.9897517,0.0009887571,0.005763853,0.00006559618,0.00005418329,0.00003588699,0.001322578,0.00003105914,0.001986264],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001620527,"threshold_uncertainty_score":0.005421221,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01123085807187943,"score_gpt":0.213887283094651,"score_spread":0.2026564250227716,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}