{"id":"W1570716079","doi":"10.1002/0471142735.im1434s102","title":"Dynamic Quantitative Assays of Phagosomal Function","year":2013,"lang":"en","type":"article","venue":"Current Protocols in Immunology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; U.S. Public Health Service; Wellcome Trust","keywords":"Phagosome; Flow cytometry; Lysosome; Chemistry; Förster resonance energy transfer; Effector; Macrophage; Cell biology; Superoxide; Confocal microscopy; Biophysics; Respiratory burst; Intracellular; Fluorescence; Biochemistry; Biology; In vitro; Molecular biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003565125,0.001583108,0.001185058,0.001864985,0.000788569,0.001705597,0.001977214,0.001400878,0.003471479],"category_scores_gemma":[0.003181558,0.000582997,0.0007140083,0.002415427,0.001036073,0.001759054,0.001229996,0.003157801,0.001751563],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001393817,"about_ca_system_score_gemma":0.0005644065,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005947585,"about_ca_topic_score_gemma":0.0007946633,"domain_scores_codex":[0.9948008,0.001039696,0.0003471063,0.001169884,0.002198091,0.000444409],"domain_scores_gemma":[0.9964882,0.001449308,0.0004783576,0.0006046153,0.000822414,0.0001571549],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001949006,0.0002293804,0.0005764529,0.0004199054,0.00005780402,0.00006005883,0.0002149895,0.001067758,0.9730716,0.003902183,0.001135573,0.01906949],"study_design_scores_gemma":[0.00002032018,0.0003100869,0.001807901,0.00005496746,0.00004180799,0.0002039342,0.00007412738,0.007698299,0.9805312,0.001282785,0.007921144,0.00005340641],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.1557198,0.01299752,0.8017883,0.0004679548,0.0005460891,0.001128104,0.006590815,0.002812804,0.01794853],"genre_scores_gemma":[0.4901051,0.01609248,0.4527515,0.0005233352,0.0003445234,0.006291884,0.008238105,0.0007437633,0.02490938],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.003565125,"threshold_uncertainty_score":0.01885438,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02816940346044501,"score_gpt":0.3322468635311008,"score_spread":0.3040774600706558,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}