{"id":"W1572214754","doi":"10.18632/oncotarget.4034","title":"Identification and evaluation of network modules for the prognosis of basal-like breast cancer","year":2015,"lang":"en","type":"article","venue":"Oncotarget","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Medicine; Oncology; Breast cancer; Internal medicine; Cohort; Proportional hazards model; Survival analysis; Tissue microarray; Cancer","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004022326,0.00006184753,0.00009133909,0.000008413379,0.00003629687,0.000004079462,0.00005550267,0.0000343281,0.000003498114],"category_scores_gemma":[0.00002808992,0.00004384885,0.0000316076,0.00004533961,0.0000685109,0.000003083396,0.00003220876,0.00001180197,1.943374e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001857949,"about_ca_system_score_gemma":0.00007034186,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001368172,"about_ca_topic_score_gemma":0.0001622935,"domain_scores_codex":[0.9994892,0.00003519259,0.0001290399,0.000129722,0.0001397329,0.00007710317],"domain_scores_gemma":[0.9992835,0.00001678894,0.0001226465,0.0001348512,0.0004228502,0.00001938188],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007537784,0.000263423,0.8420203,0.0001031424,0.000948619,5.913498e-8,0.0006380626,0.008225101,0.04145851,0.0002324469,0.06413054,0.04122595],"study_design_scores_gemma":[0.001448874,0.00009718198,0.9609358,0.00003079259,0.0004190514,0.000001827275,0.000191232,0.003402472,0.02951168,0.0008704243,0.002987943,0.0001027719],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9869067,0.01003512,0.0007881909,0.001249334,0.0002348678,0.0004962769,0.0002338172,0.000002963562,0.00005272081],"genre_scores_gemma":[0.9987332,0.0003110968,0.0003704366,0.00003612398,0.0001807371,0.0002696477,0.00005533086,0.000007655042,0.00003581341],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1189154,"threshold_uncertainty_score":0.1788104,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03395991233578381,"score_gpt":0.3172354864274345,"score_spread":0.2832755740916507,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}