{"id":"W1577971851","doi":"10.1002/hep.27310","title":"Phylogenetic clustering of hepatitis C virus among people who inject drugs in Vancouver, Canada","year":2014,"lang":"en","type":"article","venue":"Hepatology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Simon Fraser University; St. Paul's Hospital; BC Centre for Disease Control","funders":"National Health and Medical Research Council; Medical Research Council; International AIDS Society; Canadian Institutes of Health Research; Ministry of Health, British Columbia; Simon Fraser University; National Institutes of Health; Canada Research Chairs; Providence Health Care; UNICEF; Australian Government; Gilead Sciences; Michael Smith Health Research BC; ViiV Healthcare; University of British Columbia; World Health Organization; National Institute on Drug Abuse; Bristol-Myers Squibb","keywords":"Phylogenetic tree; Virology; Hepatitis C virus; Medicine; Virus; Biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006983455,0.0002437259,0.0004447321,0.002290956,0.004037641,0.001272616,0.001108859,0.0004877571,0.002313171],"category_scores_gemma":[0.002737481,0.0002795052,0.0002635487,0.00500819,0.0007944453,0.0002850297,0.001010286,0.0004969541,0.0002904725],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01291105,"about_ca_system_score_gemma":0.01436565,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9811405,"about_ca_topic_score_gemma":0.9880179,"domain_scores_codex":[0.9991099,0.0001338094,0.00005614732,0.0001867635,0.0002521426,0.000261301],"domain_scores_gemma":[0.9973834,0.0002035162,0.0005389031,0.00007274096,0.001379287,0.0004220237],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006382396,0.00001503588,0.9886588,0.00005771108,0.00003147173,0.00008121107,0.002000586,0.0001479912,0.0002710417,0.00007454734,0.0007549449,0.007842788],"study_design_scores_gemma":[0.000004844994,0.00001703625,0.9950868,0.00007147191,0.0000143474,0.0001019928,0.003276288,0.0004588246,0.00005320507,0.00004540648,0.000861241,0.000008544165],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948139,0.001220429,0.0002317993,0.000345083,0.000007781438,0.00004244599,0.001573019,0.000009853127,0.001755644],"genre_scores_gemma":[0.9971176,0.0007287213,0.0004736194,0.00009077385,0.000003662071,0.00001499344,0.0009536095,0.000005711127,0.0006113283],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01885951,"threshold_uncertainty_score":0.09367669,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009622125758640803,"score_gpt":0.257430536369375,"score_spread":0.2478084106107342,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}