{"id":"W1580036800","doi":"10.1002/9781118474310.ch8","title":"New and current approaches for isolation, identification, and genotyping of<i>Mycobacterium bovis</i>","year":2014,"lang":"en","type":"other","venue":"","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Genotyping; Variable number tandem repeat; Computational biology; Typing; Biology; Isolation (microbiology); Tandem repeat; Mycobacterium bovis; Polymerase chain reaction; Genome; Identification (biology); Genetics; Mycobacterium tuberculosis; Genotype; Tuberculosis; Bioinformatics; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003553282,0.0007649095,0.0006947459,0.002867344,0.0006593377,0.002507873,0.001856798,0.001105999,0.01531723],"category_scores_gemma":[0.002812304,0.0003439606,0.0006394921,0.002010567,0.001749427,0.002492741,0.001589985,0.001803918,0.01056024],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009125698,"about_ca_system_score_gemma":0.001095903,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001664629,"about_ca_topic_score_gemma":0.004382432,"domain_scores_codex":[0.9962902,0.000878023,0.0003542504,0.0008808237,0.001361237,0.0002355048],"domain_scores_gemma":[0.9970709,0.0006020605,0.0006417396,0.0007706136,0.0005919971,0.0003226531],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001319646,0.0003028769,0.007487133,0.001717595,0.00004690957,0.0002010807,0.0003529651,0.0002224302,0.04252208,0.009062612,0.01982611,0.9181262],"study_design_scores_gemma":[0.00004919352,0.000454232,0.02595666,0.001166627,0.00013196,0.005117547,0.0006401383,0.00113524,0.03652963,0.0119726,0.9167522,0.00009400902],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.05032498,0.3343467,0.308265,0.03213472,0.004571946,0.001200602,0.003978189,0.003068991,0.2621088],"genre_scores_gemma":[0.1754447,0.3300357,0.3419894,0.01516767,0.004957396,0.001190619,0.008007809,0.0005705296,0.1226362],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01531723,"threshold_uncertainty_score":0.05124122,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05310175939449772,"score_gpt":0.3248799665674812,"score_spread":0.2717782071729835,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}