{"id":"W1581828009","doi":"10.1111/j.1865-1682.2010.01144.x","title":"Phylogenetic Analysis of Classical Swine Fever Virus Isolates from Peru","year":2010,"lang":"en","type":"article","venue":"Transboundary and Emerging Diseases","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Clade; Phylogenetic tree; Outbreak; Monophyly; Biology; Virology; Phylogenetics; Virus; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000708703,0.0001478932,0.0003313215,0.00003515129,0.0002025633,0.00003227156,0.0001541161,0.00006563744,0.002758731],"category_scores_gemma":[0.00002784968,0.00006534861,0.0002395395,0.0003591713,0.0002546587,0.0001065932,0.00003600675,0.00009590705,0.000007498546],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002332934,"about_ca_system_score_gemma":0.000005543378,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008606624,"about_ca_topic_score_gemma":0.001747737,"domain_scores_codex":[0.9990767,0.00005890358,0.0002300171,0.0003162949,0.00009738969,0.0002206756],"domain_scores_gemma":[0.9994833,0.0002089143,0.00005498674,0.00006635415,0.00002280409,0.0001636389],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002407596,0.0002869544,0.5851479,0.00001967644,0.0007995297,0.000006093607,0.0001195721,0.00003218602,0.3749591,0.000966381,0.0004017272,0.03702008],"study_design_scores_gemma":[0.0001125754,0.00007062459,0.9864274,0.000004783573,0.00132865,1.375517e-7,0.00008147549,0.00160214,0.0001013479,0.001206455,0.008908385,0.0001560745],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970136,0.001170611,0.00002563923,0.0009531653,0.00007660684,0.00007010376,0.0004849027,0.00004556709,0.0001598276],"genre_scores_gemma":[0.9989232,0.0001964053,0.00004087596,0.0002707816,0.0001536776,0.000006690102,0.0003467445,0.000001176713,0.00006039812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4012794,"threshold_uncertainty_score":0.9981529,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01271089147865699,"score_gpt":0.232870753069727,"score_spread":0.22015986159107,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}