{"id":"W1582285271","doi":"10.1186/s12864-015-1635-9","title":"Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection","year":2015,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":115,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Institute of Food and Agriculture; U.S. Department of Agriculture; Genome Alberta; Alberta Livestock and Meat Agency; Genome Canada; National Pork Board","keywords":"Biology; Quantitative trait locus; Genetics; Single-nucleotide polymorphism; Genotype; Linkage disequilibrium; Expression quantitative trait loci; Allele; Population; RNA splicing; Locus (genetics); Molecular biology; Gene; RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001562767,0.0002799378,0.000200776,0.0002976532,0.000136647,0.0001611827,0.0001775326,0.0003027687,0.001456143],"category_scores_gemma":[0.0001840467,0.0001141914,0.0003243224,0.0001566549,0.0001408501,0.00006279128,0.0001664162,0.0003320188,0.0003105205],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000209061,"about_ca_system_score_gemma":0.0001401666,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009298314,"about_ca_topic_score_gemma":0.001538443,"domain_scores_codex":[0.9999008,0.00001391636,0.000004648939,0.00003679474,0.0000273578,0.00001643928],"domain_scores_gemma":[0.9998176,0.00004270295,0.00007384604,0.00001081945,0.00001544511,0.00003961411],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001746825,0.00001814884,0.005915236,0.00003739612,0.00001385154,0.0001575201,0.00002614013,0.00008112859,0.9920406,0.000057634,0.0000553836,0.001422296],"study_design_scores_gemma":[0.00006944516,0.0005904693,0.8270596,0.00003569501,0.0001224408,0.001799762,0.0001089822,0.007867885,0.1588258,0.0002443659,0.003247326,0.00002828689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961675,0.0001836355,0.002502543,0.00003589826,0.00001080459,0.00001536564,0.0007627656,0.00004218436,0.0002793522],"genre_scores_gemma":[0.9938511,0.00004350243,0.003800318,0.00007298611,0.000007137236,0.00001729836,0.001422555,0.00001806136,0.0007670454],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001456143,"threshold_uncertainty_score":0.004871249,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09298871907191608,"score_gpt":0.3087051935824884,"score_spread":0.2157164745105724,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}