{"id":"W1582810658","doi":"10.1111/j.1365-2958.2011.07662.x","title":"TP0326, a <i>Treponema pallidum</i>β‐barrel assembly machinery A (BamA) orthologue and rare outer membrane protein","year":2011,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Fogarty International Center; National Institute of Allergy and Infectious Diseases","keywords":"Treponema; Biology; Bacterial outer membrane; Bama; Spirochaete; Circular dichroism; Porin; Biogenesis; Antigenicity; Membrane protein; Biochemistry; Escherichia coli; Bacteria; Genetics; Membrane; Virology; Antibody; Syphilis; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009585685,0.0004594566,0.0002093263,0.0001871505,0.0002409586,0.0003786377,0.0002290723,0.0003110512,0.0007797111],"category_scores_gemma":[0.0001260806,0.0001241516,0.0003872405,0.0001972725,0.0002456827,0.0002280224,0.000259597,0.000445789,0.000676563],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002258664,"about_ca_system_score_gemma":0.0002452895,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005163577,"about_ca_topic_score_gemma":0.000312239,"domain_scores_codex":[0.9999322,0.000006358134,0.000006404287,0.00002405225,0.00001771913,0.00001321635],"domain_scores_gemma":[0.9998571,0.000009409923,0.00005958234,0.00001439812,0.00001403514,0.00004541903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001030461,0.0000168689,0.001174632,0.00003710416,0.00000419858,0.0003239715,0.00001844728,0.00005527492,0.9957557,0.0001092121,0.00009256605,0.002309112],"study_design_scores_gemma":[0.0000303474,0.0008817085,0.06008612,0.00003072935,0.00004363928,0.01351696,0.0001476333,0.001517576,0.9063976,0.0003259303,0.01699056,0.00003114839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9852341,0.002529793,0.007995733,0.0001859403,0.00007906496,0.0000626665,0.001162154,0.0003796403,0.002370963],"genre_scores_gemma":[0.9852129,0.00122439,0.007306128,0.0001016559,0.00002112148,0.00003463802,0.002495938,0.00004404211,0.003559079],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007797111,"threshold_uncertainty_score":0.002608418,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01943841176133581,"score_gpt":0.2384623237329852,"score_spread":0.2190239119716494,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}