{"id":"W1583038199","doi":"10.1111/j.1365-2958.2005.04645.x","title":"A secreted anti‐activator, OspD1, and its chaperone, Spa15, are involved in the control of transcription by the type III secretion apparatus activity in <i>Shigella flexneri</i>","year":2005,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":125,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Medical Research Council Canada","keywords":"Biology; Secretion; Activator (genetics); Effector; Chaperone (clinical); Shigella flexneri; Type three secretion system; Cell biology; Coactivator; Transcription (linguistics); Transcription factor; Gene; Genetics; Biochemistry; Virulence; Escherichia coli; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004613269,0.0002020699,0.0002895089,0.0000524723,0.0000669626,0.00001326591,0.0002471564,0.0002439111,0.000004698357],"category_scores_gemma":[0.00008630673,0.0001408122,0.00007224204,0.0002484268,0.0002177084,0.000008376805,0.00007301704,0.0002859735,0.000001636065],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002730017,"about_ca_system_score_gemma":0.00004852848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008051795,"about_ca_topic_score_gemma":0.0004815217,"domain_scores_codex":[0.9983401,0.0006283312,0.00022675,0.0003761601,0.00007647964,0.0003521943],"domain_scores_gemma":[0.9994529,0.00004435336,0.000118786,0.0002683233,0.00008375,0.00003181793],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000386358,0.0001068057,0.001660769,0.0000240266,0.00006408824,0.000004085002,0.0002089182,0.00005056939,0.9970189,0.00003935239,0.0002407302,0.0001953509],"study_design_scores_gemma":[0.002363381,0.000361251,0.005974456,0.00002647015,0.00002517735,0.00001638627,0.0002665286,0.0004082319,0.9751378,0.00001039976,0.01518742,0.0002225564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9877162,0.009769542,0.0003480744,0.001373317,0.00003858197,0.000618118,0.00004511009,0.000005741869,0.00008532382],"genre_scores_gemma":[0.998014,0.00094308,0.0000189129,0.0007932425,0.00003665989,0.00005778231,0.00008710573,0.00001609732,0.00003316417],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0218812,"threshold_uncertainty_score":0.5742157,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009504747283571284,"score_gpt":0.2394575947414775,"score_spread":0.2299528474579062,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}