{"id":"W1586834401","doi":"10.1007/978-1-4939-1743-3_12","title":"Analysis and Application of Viroid-Specific Small RNAs Generated by Viroid-Inducing RNA Silencing","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Sherbrooke","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Viroid; RNA; Biology; RNA silencing; Potato spindle tuber viroid; Gene silencing; Trans-acting siRNA; Virology; Computational biology; RNA interference; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003672543,0.0003857356,0.0002339183,0.0005415985,0.000298481,0.0004418647,0.0003321733,0.0004498571,0.0006897437],"category_scores_gemma":[0.0004849797,0.0002415037,0.000514607,0.0003390982,0.0003769166,0.0002998941,0.0002234409,0.0008221149,0.0004936696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004005943,"about_ca_system_score_gemma":0.0004603134,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007809734,"about_ca_topic_score_gemma":0.0009820599,"domain_scores_codex":[0.9997171,0.00004621442,0.00002080203,0.00008154083,0.00008835622,0.00004598537],"domain_scores_gemma":[0.9996152,0.0001683728,0.00005386649,0.00004738691,0.00007361327,0.00004152888],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001152409,0.000003061571,0.00004030053,0.00000935613,0.000001047139,0.000006739334,0.000005393658,0.00001945436,0.9994209,0.00003897284,0.000003146315,0.000440108],"study_design_scores_gemma":[0.000001973556,0.00003048548,0.0008349784,0.00000106972,0.000008714042,0.00003681306,0.0000088491,0.0004711956,0.9981345,0.00003087909,0.000438531,0.000001962411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.8903316,0.002614972,0.101034,0.0001325641,0.00005674304,0.0001740845,0.0006123534,0.000321987,0.004721703],"genre_scores_gemma":[0.9453302,0.001419602,0.04618059,0.0001153361,0.00001896831,0.0001786164,0.001815521,0.0001484087,0.004792635],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.0007809734,"threshold_uncertainty_score":0.002906501,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03677736222711489,"score_gpt":0.3394804524187889,"score_spread":0.302703090191674,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}