{"id":"W1589936144","doi":"10.3233/isb-2010-0435","title":"A Computational Approach for Identification of Epitopes in Dengue Virus Envelope Protein: A Step Towards Designing a Universal Dengue Vaccine Targeting Endemic Regions","year":2010,"lang":"en","type":"article","venue":"In Silico Biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"ca_institutions":"Brock University","funders":"","keywords":"Epitope; Dengue virus; Dengue fever; Virology; Immunogenicity; Dengue vaccine; Biology; Population; Peptide vaccine; Human leukocyte antigen; Flavivirus; Virus; Antigen; Genetics; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006315379,0.0001520968,0.0002383127,0.0001621334,0.00005183774,0.00001164924,0.0002630003,0.0002746659,0.000003241547],"category_scores_gemma":[0.0003359162,0.0001460785,0.00006838764,0.0001734591,0.00005383962,0.00001290199,0.00010053,0.0001920035,7.180241e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002028123,"about_ca_system_score_gemma":0.0001362044,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001641383,"about_ca_topic_score_gemma":0.0001324516,"domain_scores_codex":[0.9987486,0.00008375259,0.0005785384,0.0002889285,0.00005183196,0.000248369],"domain_scores_gemma":[0.9993652,0.00004361715,0.0002423436,0.0002023604,0.0001142824,0.00003227096],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001017566,0.0001172254,0.01025994,0.00006420373,0.0000294285,3.730943e-7,0.0003273678,0.001772179,0.9831105,0.001493496,0.00005935779,0.002664096],"study_design_scores_gemma":[0.006015546,0.0005551776,0.04137199,0.00006330049,0.00004053058,0.00005726085,0.002653394,0.1271014,0.8149214,0.002814593,0.003537327,0.0008680167],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8880875,0.0002530429,0.1107439,0.00006851841,0.00006561018,0.0006769378,0.00003137938,0.00000792157,0.00006518641],"genre_scores_gemma":[0.9504017,0.00003148642,0.04866887,0.00002765083,0.00006900192,0.0001664755,0.0005977335,0.00001483442,0.00002223324],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1681891,"threshold_uncertainty_score":0.5956909,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01574742297355007,"score_gpt":0.257924492618519,"score_spread":0.2421770696449689,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}