{"id":"W1592826781","doi":"10.1002/cncy.21535","title":"Multiplex sequencing for <i>EZH2</i>, <i>CD79B</i>, and <i>MYD88</i> mutations using archival cytospin preparations from B‐cell non‐Hodgkin lymphoma aspirates previously tested for <i>MYC</i> rearrangement and <i>IGH/BCL2</i> translocation","year":2015,"lang":"en","type":"article","venue":"Cancer Cytopathology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Chromosomal translocation; Sanger sequencing; Fluorescence in situ hybridization; Lymphoma; Gene rearrangement; Molecular biology; Multiplex; Multiplex ligation-dependent probe amplification; Multiplex polymerase chain reaction; Cancer research; Mutation; Biology; Medicine; Gene; Polymerase chain reaction; Genetics; Pathology; Chromosome; Exon","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003189211,0.0004002826,0.0006902175,0.0001355573,0.0002975311,0.00007356826,0.0000957858,0.0001660192,0.000004287172],"category_scores_gemma":[0.0001227159,0.0003743314,0.0001349364,0.0001781471,0.0002240155,0.0002079265,0.00004501194,0.00007533695,0.000002340744],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004997777,"about_ca_system_score_gemma":0.000816404,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008874299,"about_ca_topic_score_gemma":0.0005295586,"domain_scores_codex":[0.9977244,0.00009824507,0.0006185137,0.000835838,0.0001939278,0.0005290483],"domain_scores_gemma":[0.9982654,0.0003924955,0.000263843,0.0003772793,0.0003398287,0.0003611097],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002190312,0.001298239,0.08259673,0.0007577238,0.0004156086,0.0001352596,0.01371334,0.001973408,0.8355848,0.0003223484,0.00271434,0.05829796],"study_design_scores_gemma":[0.1107545,0.009265152,0.05800769,0.001735757,0.006944218,0.001533057,0.004203802,0.06304637,0.7060257,0.004513709,0.03129223,0.002677893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9710041,0.006354509,0.01618983,0.000912687,0.0002943359,0.00394799,0.0009465126,0.0001026564,0.0002473902],"genre_scores_gemma":[0.9604168,0.000719588,0.0330424,0.001567159,0.0003451653,0.003124076,0.0006319863,0.00007416208,0.00007867191],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1295591,"threshold_uncertainty_score":0.9998708,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08855667975440545,"score_gpt":0.3405722976572889,"score_spread":0.2520156179028834,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}